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The Evolutionary Life History of P Transposons: from Horizontal Invaders to Domesticated Neogenes
Chromosoma (2001) 110:148–158 DOI 10.1007/s004120100144 CHROMOSOMA FOCUS Wilhelm Pinsker · Elisabeth Haring Sylvia Hagemann · Wolfgang J. Miller The evolutionary life history of P transposons: from horizontal invaders to domesticated neogenes Received: 5 February 2001 / In revised form: 15 March 2001 / Accepted: 15 March 2001 / Published online: 3 May 2001 © Springer-Verlag 2001 Abstract P elements, a family of DNA transposons, are uct of their self-propagating lifestyle. One of the most known as aggressive intruders into the hitherto uninfected intensively studied examples is the P element of Dro- gene pool of Drosophila melanogaster. Invading through sophila, a family of DNA transposons that has proved horizontal transmission from an external source they useful not only as a genetic tool (e.g., transposon tag- managed to spread rapidly through natural populations ging, germline transformation vector), but also as a model within a few decades. Owing to their propensity for rapid system for investigating general features of the evolu- propagation within genomes as well as within popula- tionary behavior of mobile DNA (Kidwell 1994). P ele- tions, they are considered as the classic example of self- ments were first discovered as the causative agent of hy- ish DNA, causing havoc in a genomic environment per- brid dysgenesis in Drosophila melanogaster (Kidwell et missive for transpositional activity. Tracing the fate of P al. 1977) and were later characterized as a family of transposons on an evolutionary scale we describe differ- DNA transposons -
Diptera, Drosophilidae) in an Atlantic Forest Fragment Near Sandbanks in the Santa Catarina Coast Bruna M
08 A SIMPÓSIO DE ECOLOGIA,GENÉTICA IX E EVOLUÇÃO DE DROSOPHILA 08 A 11 de novembro, Brasília – DF, Brasil Resumos Abstracts IX SEGED Coordenação: Vice-coordenação: Rosana Tidon (UnB) Nilda Maria Diniz (UnB) Comitê Científico: Comissão Organizadora e Antonio Bernardo de Carvalho Executora (UFRJ) Bruna Lisboa de Oliveira Blanche C. Bitner-Mathè (UFRJ) Bárbara F.D.Leão Claudia Rohde (UFPE) Dariane Isabel Schneider Juliana Cordeiro (UFPEL) Francisco Roque Lilian Madi-Ravazzi (UNESP) Henrique Valadão Marlúcia Bonifácio Martins (MPEG) Hilton de Jesus dos Santos Igor de Oliveira Santos Comitê de avaliação dos Jonathan Mendes de Almeida trabalhos: Leandro Carvalho Francisco Roque (IFB) Lucas Las-Casas Martin Alejandro Montes (UFRP) Natalia Barbi Chaves Victor Hugo Valiati (UNISINOS) Pedro Henrique S. F. Gomes Gustavo Campos da Silva Kuhn Pedro Henrique S. Lopes (UFMG) Pedro Paulo de Queirós Souza Rogério Pincela Mateus Renata Alves da Mata (UNICENTRO) Waira Saravia Machida Lizandra Jaqueline Robe (UFSM) Norma Machado da Silva (UFSC) Gabriel Wallau (FIOCRUZ) IX SEGED Introdução O Simpósio de Ecologia, Genética e Evolução de Drosophila (SEGED) é um evento bianual que reúne drosofilistas do Brasil e do exterior desde 1999, e conta sempre com uma grande participação de estudantes. Em decorrência do constante diálogo entre os diversos laboratórios, os encontros têm sido muito produtivos para a discussão de problemas e consolidação de colaborações. Tendo em vista que as moscas do gênero Drosophila são excelentes modelos para estudos em diversas áreas (provavelmente os organismos eucariotos mais investigados pela Ciência), essas parcerias podem contribuir também para o desenvolvimento de áreas aplicadas, como a Biologia da Conservação e o controle biológico da dengue. -
New Immigrant Drosophilidae in Hawaii, and a Checklist of the Established Immigrant Species
NProcew .I mmHawaiianIgraNt E Dntomolrosoph. ISlidocae. (2009) in hawa 41:121–127ii 121 New Immigrant Drosophilidae in Hawaii, and a Checklist of the Established Immigrant Species Luc Leblanc, Patrick M. O’Grady1, Daniel Rubinoff, and Steven L. Montgomery2 Department of Plant and Environmental Protection Sciences, University of Hawaii, 3050 Maile Way, Room 310, Honolulu, HI 96822-2271 1Department of Environmental Science, Policy and Management, University of California, Berkeley, 117A Hilgard, Berkeley, CA 94720 294-610 Palai St., Waipahu, HI 96797-4535 Abstract. Six immigrant species are added to the list of Drosophilidae of Hawaii. They are: Amiota sp, Drosophila bizonata Kikkawa and Peng, D. nasutoides Okada, Hirtodrosophila sp. nr. unicolorata Wheeler, Scaptodrosophila sp., and Scaptomyza pallida (Zetterstedt). Seven new island records of previously established species are also documented. An annotated list of the 32 immigrant species of Drosophilidae established in Hawaii is provided, with the earliest confirmed year of detection for each species. Key words: Drosophilidae, Hawaii, Distribution The family Drosophilidae consists of 3950 valid species (Brake and Bächli 2008). With 559 endemic species (O’Grady et al. 2009), and an estimated 900-1000 in total, the Hawai- ian Islands have the highest regional drosophilid species diversity globally. Five species of immigrant Drosophilidae were listed as occurring in Hawaii by early authors (Sturtevant 1921, Bryan 1934), but most of these records were later shown to be misidentifications. Zimmerman (1943) was the first to document thoroughly the immigrant Hawaiian drosophilid fauna, based on available material in collections and field surveying. He pointed out that the species of Drosophila recorded in early literature as D. -
Phylogeny of Drosophila and Related Genera Inferred from the Nucleotide Sequence of the Cu,Zn Sod Gene
J Mol Evol (1994) 38:443454 Journal of Molecular Evolution © Springer-VerlagNew York Inc. 1994 Phylogeny of Drosophila and Related Genera Inferred from the Nucleotide Sequence of the Cu,Zn Sod Gene Jan Kwiatowski, 1,2 Douglas Skarecky, 1 Kevin Bailey, 1 Francisco J. Ayala 1 I Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92717, USA 2 Institute of Botany, Warsaw University, 00-478 Warsaw, Poland Received: 20 March 1993/Revised: 31 August 1993/Accepted: 30 September 1993 Abstract. The phylogeny and taxonomy of the dro- book of Genetics. Plenum Press, New York, pp. 421- sophilids have been the subject of extensive investiga- 469, 1975) phylogeny; are inconsistent in some impor- tions. Recently, Grimaldi (1990) has challenged some tant ways with Grimaldi's (Bull. Am. Museum Nat. Hist. common conceptions, and several sets of molecular da- 197:1-139, 1990) cladistic analysis; and also are in- ta have provided information not always compatible consistent with some inferences based on mitochondri- with other taxonomic knowledge or consistent with al DNA data. The Sod results manifest how, in addition each other. We present the coding nucleotide sequence to the information derived from nucleotide sequences, of the Cu,Zn superoxide dismutase gene (Sod) for 15 structural features (i.e., the deletion of an intron) can species, which include the medfly Ceratitis capitata help resolve phylogenetic issues. (family Tephritidae), the genera Chymomyza and Za- prionus, and representatives of the subgenera Dor- Key words: Superoxide dismutase gene -- Drosophi- silopha, Drosophila, Hirtodrosophila, Scaptodrosophi- la phylogeny -- Nucleotide sequence -- Medfly Ce- la, and Sophophora. -
Far Eastern Entomologist Number 381: 9-14 ISSN 1026-051X April 2019
Far Eastern Entomologist Number 381: 9-14 ISSN 1026-051X April 2019 https://doi.org/10.25221/fee.381.2 http://zoobank.org/References/609FE755-E9D2-4DED-A7FC-F5C4D1B50D0D AN ANNOTATED LIST OF THE DROSOPHILID FLIES (DIPTERA: DROSOPHILIDAE) OF TUVA N. G. Gornostaev*, A. M. Kulikov N.K. Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Vavilov Str. 26, Moscow 119991, Russia. *Corresponding author, E-mail: [email protected] Summary. An annotated list of 29 species in seven genera of the drosophilid flies of Tuva Republic is given. Among them 25 species are recorded from Tuva for the first time. The drosophilid fauna of Tuva is compared with Altai. Key words: Diptera, Drosophilidae, fauna, new records, Tuva, Russia. Н. Г. Горностаев, А. М. Куликов. Аннотированный список мух-дрозо- филид (Diptera: Drosophilidae) Тувы // Дальневосточный энтомолог. 2019. N 381. С. 9-14. Резюме. Приведен аннотированный список 29 видов из 7 родов мух-дрозофилид Тувы, из которых 25 видов впервые отмечаются для этого региона. Проведено сравнение фауны дрозофилид Тувы и Алтая. INTRODUCTION The first very short regional list of the drosophilid flies (Drosophilidae) of Tuva includes four species of the genera Leucophenga, Chymomyza and Drosophila collected by N.P. Krivosheina in Ishtii-Khem (51°19' N, 92°28' E) (Gornostaev, 1997). Here we present new additions to this list after examination of the materials collected by A.M. Kulikov (AK) in Tuva in West Sayan (vicinities of Kyzyl, 51°42′ N, 94°22′ E) and in the Azas State Reserve (vicinities of Toora-Khem, 52°28′ N, 96°07′ E). All collected specimens were stored in 70% ethanol and determined by the first author. -
Highly Contiguous Assemblies of 101 Drosophilid Genomes
TOOLS AND RESOURCES Highly contiguous assemblies of 101 drosophilid genomes Bernard Y Kim1†*, Jeremy R Wang2†, Danny E Miller3, Olga Barmina4, Emily Delaney4, Ammon Thompson4, Aaron A Comeault5, David Peede6, Emmanuel RR D’Agostino6, Julianne Pelaez7, Jessica M Aguilar7, Diler Haji7, Teruyuki Matsunaga7, Ellie E Armstrong1, Molly Zych8, Yoshitaka Ogawa9, Marina Stamenkovic´-Radak10, Mihailo Jelic´ 10, Marija Savic´ Veselinovic´ 10, Marija Tanaskovic´ 11, Pavle Eric´ 11, Jian-Jun Gao12, Takehiro K Katoh12, Masanori J Toda13, Hideaki Watabe14, Masayoshi Watada15, Jeremy S Davis16, Leonie C Moyle17, Giulia Manoli18, Enrico Bertolini18, Vladimı´rKosˇtˇa´ l19, R Scott Hawley20, Aya Takahashi9, Corbin D Jones6, Donald K Price21, Noah Whiteman7, Artyom Kopp4, Daniel R Matute6†*, Dmitri A Petrov1†* 1Department of Biology, Stanford University, Stanford, United States; 2Department of Genetics, University of North Carolina, Chapel Hill, United States; 3Department of Pediatrics, Division of Genetic Medicine, University of Washington and Seattle Children’s Hospital, Seattle, United States; 4Department of Evolution and Ecology, University of California Davis, Davis, United States; 5School of Natural Sciences, Bangor University, Bangor, United Kingdom; 6Biology Department, University of North Carolina, Chapel Hill, United States; 7Department of Integrative Biology, University of California, Berkeley, Berkeley, United States; 8Molecular and Cellular Biology Program, University of Washington, Seattle, United States; 9Department of 10 *For correspondence: -
International Journal of Entomology Drosophilidae
INTERNATIONAL JOURNAL OF ENTOMOLOGY International Journal of Entomology Vol. 25, no. 4: 239-248 29 December 1983 Published by Department of Entomology, Bishop Museum, Honolulu, Hawaii, USA. Editorial committee: JoAnn M. Tenorio (Senior Editor). G.A. Samuelson & Neal Evenhuis (Co-editors), F.J. Radovsky (Managing Editor), S. Asahina, J.F.G. Clarke, K.C. Emerson, R.C Fennah, D.E. Hardy, R.A. Harrison, J. Lawrence, H. Levi, T.C. Maa, J. Medler, CD. Michener, W.W. Moss, CW. Sabrosky, J.J.H. Szent-Ivany, I.W.B. Thornton, J. van der Vecht, E.C Zimmerman. Devoted to original research on all terrestrial arthropods. Zoogeographic scope is worldwide, with special emphasis on the Pacific Basin and bordering land masses. © 1983 by the Bishop Museum DROSOPHILIDAE OF THE GALAPAGOS ISLANDS, WITH DESCRIPTIONS OF TWO NEW SPECIES Hampton L. Carson,1 Francisca C. Val,2 and Marshall R. Wheeler3 Abstract. A 1977 collection of Drosophilidae from 3 major islands of the Galapagos yielded 774 specimens. Of 10 species not recorded previously, 2 are new and are here described. One of these appears to be characteristic of the arid zone in Isla Santa Cruz but cannot be considered endemic until comparable continental habitats are studied. Of the 15 species found, 7 are cos mopolitan and 6 are well-known Neotropical species, suggesting an affinity to Ecuador. We con clude that the drosophilid fauna of the Galapagos is depauperate and consider earlier suggestions that a rich fauna exists to be erroneous. In the last 25 years, faunal surveys ofthe world Drosophilidae have produced many surprises. -
A-Glycerophosphate Dehydrogenase Within the Genus Drosophila (Dipteran Evolution/Unit Evolutionary Period) GLEN E
Proc. Natl. Acad. Sci. USA Vol. 74, No. 2, pp. 684-688, February 1977 Genetics Microcomplement fixation studies on the evolution of a-glycerophosphate dehydrogenase within the genus Drosophila (dipteran evolution/unit evolutionary period) GLEN E. COLLIER AND Ross J. MACINTYRE Section of Genetics, Development and Physiology, Plant Science Building, Cornell University, Ithaca, New York 14853 Communicated by Adrian M. Srb, November 8,1976 ABSTRACT Antisera were prepared against purified a- least in D. melanogaster, for rapid production of the energy glycerophosphate dehydrogenase (EC 1.1.1.8) (aGPDH) from needed for flight (7-9). Drosophila melanogaster, D. virifis, and D. busckii. The im- munological distances between the enzymes from the 3 species The third criterion is that the protein should be evolving and those from 31 additional drosophilid species agree in gen- relatively slowly. Although cytogenetic analysis and interspe- eral with the accepted phylogeny of the genus. These data per- cific hybridization are adequate for est*blishing phylogenetic mit an estimate that the subgenus Sophophora diverged 52 relationships among closely related species, a protein that has million years ago from the line leading to the subgenus Droso- changed slowly is particularly useful for establishing the rela- phila. The antiserum against melanogaster aGPDH was ca- pable of distinguishing alielic variants of aGPDH. On the basis tionships among species groups, subgenera, genera, and even of presumed single amino acid substitutions, no-drosophilid families or orders. Brosemer et al. (10) and Fink et al. (11) have aGPDH tested differed from the melanogaster enzyme by more established with immunological tests that the structure of than eight or nine substitutions. -
Factors That Affect the Horizontal Transfer of Transposable Elements
Curr. Issues Mol. Biol. (2004) 6: 57-72.Horizontal Transfer of Transposable Online journal at Elements www.cimb.org 57 Factors that Affect the Horizontal Transfer of Transposable Elements Joana C. Silva1*, Elgion L. Loreto2, Jonathan B. Clark3 within a genome (Doolittle and Sapienza, 1980; Orgel and Crick, 1980). Indeed, in studies that simulate genetic 1The Institute for Genomic Research, 9712 Medical Center crosses between genomes with and without transposable Drive, Rockville, MD 20850, USA elements, a TE that is transmitted to 100% of the resulting 2Departamento de Biologia-CCNE, Universidade Federal progeny can become fixed in the population even when de Santa Maria, CEP 97105-900, Santa Maria, RS, Brazil reducing fitness by 50% (Hickey, 1982). A second 3Department of Zoology, Weber State University, Ogden explanation for the persistence of TEs is that they in fact UT 84408, USA benefit the host, providing genetic variability or mediating favorable structural changes in the genome that increase host fitness (McDonald, 1993; McFadden and Knowles, Abstract 1997; Kidwell and Lisch, 2000). Several recent studies report the widespread presence of TE-derived sequences Transposable elements are characterized by their in host genes and regulatory regions (Makalowski, 2000; ability to spread within a host genome. Many are also Nekrutenko and Li, 2001; Jordan et al., 2003; Silva et al., capable of crossing species boundaries to enter new 2003). These two hypotheses are not mutually exclusive genomes, a process known as horizontal transfer. and both may play roles in the evolution of transposable Focusing mostly on animal transposable elements, we elements. review the occurrence of horizontal transfer and In addition to their propensity for intragenomic spread, examine the methods used to detect such transfers. -
Laboulbeniales Associated with the Drosophila Affinis Subgroup in Central New York
Starmer, William T., and Alex Weir. 2001. Laboulbeniales associated with the Drosophila affinis subgroup in central New York. Dros. Inf. Serv. 84: 22-24. Laboulbeniales associated with the Drosophila affinis subgroup in central New York. Starmer, William T.,1 and Alex Weir2. 1Biology Department, Syracuse University, Syracuse, NY 13044, and 2Faculty of Environmental and Forest Biology, SUNY College of Environmental Science and Forestry, 350 Illick Hall, 1 Forestry Drive, Syracuse, NY 13210. Introduction The fungal parasites of insects are not well known and those host-parasite lists that have been published (e.g., Leatherdale, 1970) usually fail to incorporate the most diverse groups of entomogenous fungi, including members of the ascomycete order Laboulbeniales. These fungi form fruiting structures on the integument of a wide range of insects and other arthropods, and are considered to be obligate ectoparasites. Most of the described parasite species are associated with beetles (Coleoptera) as hosts. The Laboulbeniales parasites of flies (Diptera) have received less attention. Fungal parasites of Diptera include species in the large genus Stigmatomyces, with more than 100 described species. These are known on a range of families including Agromyzidae, Chloropidae, Diopsidae, Dolichopodidae, Ephydridae, Muscidae, and Sphaeroceridae. The very first Stigmatomyces species to be described from North America was recorded from New York on a species of Drosophila (Peck, 1885, as Appendicularia). In this report we document the incidence of Laboulbeniales in a temporal study of temperate drosophilids in central New York, USA. Methods Adult Drosophila and related species were captured by netting and aspirating flies from compost and decaying mushrooms in and around Green Lakes State Park, New York, during late September 1999 and during the Spring and Summer of 2000. -
SPC Trochus Information Bulletin #13 – Abstracts & Publications
SPC Trochus Information Bulletin #13 – July 2007 25 Abstracts & publications Management options for restocked trochus fisheries S. Purcell Source: K.M Leber, S. Kitada, H.L Blakenship, T. Svåsand (eds). 2004. Stock enhancement and sea ranching: developments, pitfalls and opportunities. 2nd Edition. Blackwell Pub., Oxford. p. 233–243. Methods for restocking trochus fisheries have advanced greatly in recent years but restocking activities must link to sound management schemes to ensure sustainability of trochus fisheries. Management schemes generally have greater acceptance and persistence if these are community-based and enforced at a local level. Plans for seasonal or periodic closures, quotas and size limits need to be location-specific due to regional differences in trochus demography and traditional management approaches. Marine Protected Areas (MPAs) or No-Take Zones should be established at multiple sites for restocking trochus and preserving breeding populations. Fishing grounds should be protected for at least 5 years for recovery of sustainable stocks and fishing should commence on the basis of favourable stock assessment. Slot limits allow trochus 1–2 spawning years before reaching legal size and protect the very large individuals. Provided that fishers comply with size limits, MPAs and community-based management schemes should allow restocked trochus to replenish fisheries, leading to increased, sustained harvests. Rapid recruitment of corals on top shell snail aquaculture structures M. Omori, H. Kubo, K. Kajiwara, H. Matsumoto, A. Watanuki Source: Coral Reefs 25(2): 280. May 2006. No Abstract. Using impact assessment methods to determine the effects of a marine reserve on abundances and sizes of valuable tropical invertebrates M.P. -
9Th International Congress of Dipterology
9th International Congress of Dipterology Abstracts Volume 25–30 November 2018 Windhoek Namibia Organising Committee: Ashley H. Kirk-Spriggs (Chair) Burgert Muller Mary Kirk-Spriggs Gillian Maggs-Kölling Kenneth Uiseb Seth Eiseb Michael Osae Sunday Ekesi Candice-Lee Lyons Edited by: Ashley H. Kirk-Spriggs Burgert Muller 9th International Congress of Dipterology 25–30 November 2018 Windhoek, Namibia Abstract Volume Edited by: Ashley H. Kirk-Spriggs & Burgert S. Muller Namibian Ministry of Environment and Tourism Organising Committee Ashley H. Kirk-Spriggs (Chair) Burgert Muller Mary Kirk-Spriggs Gillian Maggs-Kölling Kenneth Uiseb Seth Eiseb Michael Osae Sunday Ekesi Candice-Lee Lyons Published by the International Congresses of Dipterology, © 2018. Printed by John Meinert Printers, Windhoek, Namibia. ISBN: 978-1-86847-181-2 Suggested citation: Adams, Z.J. & Pont, A.C. 2018. In celebration of Roger Ward Crosskey (1930–2017) – a life well spent. In: Kirk-Spriggs, A.H. & Muller, B.S., eds, Abstracts volume. 9th International Congress of Dipterology, 25–30 November 2018, Windhoek, Namibia. International Congresses of Dipterology, Windhoek, p. 2. [Abstract]. Front cover image: Tray of micro-pinned flies from the Democratic Republic of Congo (photograph © K. Panne coucke). Cover design: Craig Barlow (previously National Museum, Bloemfontein). Disclaimer: Following recommendations of the various nomenclatorial codes, this volume is not issued for the purposes of the public and scientific record, or for the purposes of taxonomic nomenclature, and as such, is not published in the meaning of the various codes. Thus, any nomenclatural act contained herein (e.g., new combinations, new names, etc.), does not enter biological nomenclature or pre-empt publication in another work.