Alzheimer's and Parkinson's Diseases
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Basal Forebrain Volume Reliably Predicts the Cortical Spread of Alzheimer’S Degeneration
bioRxiv preprint doi: https://doi.org/10.1101/676544; this version posted June 20, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Title: Basal forebrain volume reliably predicts the cortical spread of Alzheimer’s degeneration Short running title: Predictive spread of Alzheimer’s degeneration Authors: Sara Fernández-Cabello1,2, Martin Kronbichler1,2,3, Koene R. A. Van Dijk4, James A. Goodman4, R. Nathan Spreng5,6,7, Taylor W. Schmitz8,9 for the Alzheimer’s Disease Neuroimaging Initiative* Affiliations: 1 Department of Psychology, University of Salzburg, Salzburg, Austria 2 Centre for Cognitive Neuroscience, University of Salzburg, Salzburg, Austria 3 Neuroscience Institute, Christian-Doppler Medical Centre, Paracelsus Medical University, Salzburg, Austria. 4 Clinical and Translational Imaging, Early Clinical Development, Pfizer Inc, Cambridge, MA, United States 5 Laboratory of Brain and Cognition, Montreal Neurological Institute, Department of Neurology and Neurosurgery, McGill University, Montreal, QC, Canada 6 Departments of Psychiatry and Psychology, McGill University, Montreal, QC, Canada 7 Douglas Mental Health University Institute, Verdun, QC, Canada 8 Brain and Mind Institute, Western University, London, ON, Canada 9 Department of Physiology and Pharmacology, Western University, London, ON, Canada * Data used in preparation of this article were obtained from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database (adni.loni.usc.edu). As such, the investigators within the ADNI contributed to the design and implementation of ADNI and/or provided data but did not participate in analysis or writing of this report. -
The Prion-Like Spreading of Alpha-Synuclein in Parkinson’S Disease: Update on Models and Hypotheses
International Journal of Molecular Sciences Review The Prion-Like Spreading of Alpha-Synuclein in Parkinson’s Disease: Update on Models and Hypotheses Asad Jan 1,* ,Nádia Pereira Gonçalves 1,2 , Christian Bjerggaard Vaegter 1,2 , Poul Henning Jensen 1 and Nelson Ferreira 1,* 1 Danish Research Institute of Translational Neuroscience (DANDRITE), Nordic EMBL Partnership for Molecular Medicine, Department of Biomedicine, Aarhus University, 8000 Aarhus, Denmark; [email protected] (N.P.G.); [email protected] (C.B.V.); [email protected] (P.H.J.) 2 International Diabetic Neuropathy Consortium (IDNC), Aarhus University Hospital, 8200 Aarhus, Denmark * Correspondence: [email protected] (A.J.); [email protected] (N.F.) Abstract: The pathological aggregation of the presynaptic protein α-synuclein (α-syn) and propa- gation through synaptically coupled neuroanatomical tracts is increasingly thought to underlie the pathophysiological progression of Parkinson’s disease (PD) and related synucleinopathies. Although the precise molecular mechanisms responsible for the spreading of pathological α-syn accumulation in the CNS are not fully understood, growing evidence suggests that de novo α-syn misfolding and/or neuronal internalization of aggregated α-syn facilitates conformational templating of en- dogenous α-syn monomers in a mechanism reminiscent of prions. A refined understanding of the biochemical and cellular factors mediating the pathological neuron-to-neuron propagation of mis- folded α-syn will potentially elucidate the etiology of PD and unravel novel targets for therapeutic Citation: Jan, A.; Gonçalves, N.P.; intervention. Here, we discuss recent developments on the hypothesis regarding trans-synaptic Vaegter, C.B.; Jensen, P.H.; Ferreira, N. -
Clinical Implications of Recent Advances in Proteogenomics
Clinical implications of recent advances in proteogenomics Marie Locard-Paulet, Olivier Pible, Anne Gonzalez de Peredo, Béatrice Alpha-Bazin, Christine Almunia, Odile Burlet-Schiltz, J. Armengaud To cite this version: Marie Locard-Paulet, Olivier Pible, Anne Gonzalez de Peredo, Béatrice Alpha-Bazin, Christine Almu- nia, et al.. Clinical implications of recent advances in proteogenomics. Expert Review of Proteomics, Taylor & Francis, 2016, 13 (2), pp.185-199. 10.1586/14789450.2016.1132169. hal-03080146 HAL Id: hal-03080146 https://hal.archives-ouvertes.fr/hal-03080146 Submitted on 19 Mar 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Publisher: Taylor & Francis Journal: Expert Review of Proteomics DOI: 10.1586/14789450.2016.1132169 Review Clinical implications of recent advances in proteogenomics Marie Locard-Paulet1,2, Olivier Pible3, Anne Gonzalez de Peredo1,2, Béatrice Alpha-Bazin3, Christine Almunia3, Odile Burlet-Schiltz1,2, Jean Armengaud3* 1CNRS, IPBS (Institut de Pharmacologie et Biologie Structurale), 205 route de Narbonne, 31077 Toulouse, France. 2Université de Toulouse, UPS, IPBS, 31077 Toulouse, France. 3CEA-Marcoule, DSV/IBITEC-S/SPI/Li2D, Laboratory “Innovative technologies for Detection and Diagnostics”, BP 17171, F-30200 Bagnols-sur-Cèze, France. -
(Brainnet Europe Protocol) to the MRC Cognitive Function and Ageing Brain Study Stephen B
Wharton et al. Acta Neuropathologica Communications (2016) 4:11 DOI 10.1186/s40478-016-0275-x RESEARCH Open Access Epidemiological pathology of Tau in the ageing brain: application of staging for neuropil threads (BrainNet Europe protocol) to the MRC cognitive function and ageing brain study Stephen B. Wharton1, Thais Minett2,3, David Drew1, Gillian Forster1, Fiona Matthews4, Carol Brayne3, Paul G. Ince1* and on behalf of the MRC Cognitive Function and Ageing Neuropathology Study Group Abstract Introduction: Deposition of abnormally phosphorylated tau (phospho-tau) occurs in Alzheimer’sdisease but also with brain ageing. The Braak staging scheme focused on neurofibrillary tangles, butabundant p-tau is also present in neuropil threads, and a recent scheme has been proposed by theBrainNet Europe consortium for staging tau pathology based on neuropil threads. We determined therelationship of threads to tangles, and the value of staging for threads in an unselected population-representative ageing brain cohort. We also determined the prevalence of astroglial tau pathologies, and their relationship to neuronal tau. Phospho-tau pathology was determined by immunohistochemistry (AT8 antibody) in the MRC-CFAS neuropathology cohort. Neuropil threads were staged using the BrainNet Europe protocol for tau pathology, and compared with Braak tangle stages. Astroglial tau pathology was assessed in neo-cortical, mesial temporal and subcortical areas. Results: Cases conformed well to the hierarchical neuropil threads staging of the BrainNet Europe protocol and correlated strongly with Braak staging (r=0.84, p < 0.001). Based on the areas under the receiver operator curves (AUC), incorporating either threads or tangle staging significantly improved dementia case identification to a similar degree over age alone (Braak stage X2(1)=10.1, p=0.002; BNE stage X2(1)=9.7, p=0.002). -
Quantitative Analysis of Axon Collaterals of Single Pyramidal Cells
Yang et al. BMC Neurosci (2017) 18:25 DOI 10.1186/s12868-017-0342-7 BMC Neuroscience RESEARCH ARTICLE Open Access Quantitative analysis of axon collaterals of single pyramidal cells of the anterior piriform cortex of the guinea pig Junli Yang1,2*, Gerhard Litscher1,3* , Zhongren Sun1*, Qiang Tang1, Kiyoshi Kishi2, Satoko Oda2, Masaaki Takayanagi2, Zemin Sheng1,4, Yang Liu1, Wenhai Guo1, Ting Zhang1, Lu Wang1,3, Ingrid Gaischek3, Daniela Litscher3, Irmgard Th. Lippe5 and Masaru Kuroda2 Abstract Background: The role of the piriform cortex (PC) in olfactory information processing remains largely unknown. The anterior part of the piriform cortex (APC) has been the focus of cortical-level studies of olfactory coding, and asso- ciative processes have attracted considerable attention as an important part in odor discrimination and olfactory information processing. Associational connections of pyramidal cells in the guinea pig APC were studied by direct visualization of axons stained and quantitatively analyzed by intracellular biocytin injection in vivo. Results: The observations illustrated that axon collaterals of the individual cells were widely and spatially distrib- uted within the PC, and sometimes also showed a long associational projection to the olfactory bulb (OB). The data showed that long associational axons were both rostrally and caudally directed throughout the PC, and the intrinsic associational fibers of pyramidal cells in the APC are omnidirectional connections in the PC. Within the PC, associa- tional axons typically followed rather linear trajectories and irregular bouton distributions. Quantitative data of the axon collaterals of two pyramidal cells in the APC showed that the average length of axonal collaterals was 101 mm, out of which 79 mm (78% of total length) were distributed in the PC. -
Alpha-Synuclein: Mechanisms of Release and Pathology Progression in Synucleinopathies
cells Review Alpha-Synuclein: Mechanisms of Release and Pathology Progression in Synucleinopathies Inês C. Brás 1 and Tiago F. Outeiro 1,2,3,4,* 1 Center for Biostructural Imaging of Neurodegeneration, Department of Experimental Neurodegeneration, University Medical Center Göttingen, 37075 Göttingen, Germany; [email protected] 2 Max Planck Institute for Experimental Medicine, 37075 Göttingen, Germany 3 Faculty of Medical Sciences, Translational and Clinical Research Institute, Newcastle University, Framlington Place, Newcastle Upon Tyne NE2 4HH, UK 4 Scientific Employee with a Honorary Contract at Deutsches Zentrum für Neurodegenerative Erkrankungen (DZNE), 37075 Göttingen, Germany * Correspondence: [email protected]; Tel.: +49-(0)-551-391-3544; Fax: +49-(0)-551-392-2693 Abstract: The accumulation of misfolded alpha-synuclein (aSyn) throughout the brain, as Lewy pathology, is a phenomenon central to Parkinson’s disease (PD) pathogenesis. The stereotypical distribution and evolution of the pathology during disease is often attributed to the cell-to-cell transmission of aSyn between interconnected brain regions. The spreading of conformationally distinct aSyn protein assemblies, commonly referred as strains, is thought to result in a variety of clin- ically and pathologically heterogenous diseases known as synucleinopathies. Although tremendous progress has been made in the field, the mechanisms involved in the transfer of these assemblies between interconnected neural networks and their role in driving PD progression are still unclear. Here, we present an update of the relevant discoveries supporting or challenging the prion-like spreading hypothesis. We also discuss the importance of aSyn strains in pathology progression and the various putative molecular mechanisms involved in cell-to-cell protein release. Understanding Citation: Brás, I.C.; Outeiro, T.F. -
The Olfactory Receptor Associated Proteome
INTERNATIONAL GRADUATE SCHOOL OF NEUROSCIENCES (IGSN) RUHR UNIVERSITÄT BOCHUM THE OLFACTORY RECEPTOR ASSOCIATED PROTEOME Doctoral Dissertation David Jonathan Barbour Department of Cell Physiology Thesis advisor: Prof. Dr. Dr. Dr. Hanns Hatt Bochum, Germany (30.12.05) ABSTRACT Olfactory receptors (OR) are G-protein-coupled membrane receptors (GPCRs) that comprise the largest vertebrate multigene family (~1,000 ORs in mouse and rat, ~350 in human); they are expressed individually in the sensory neurons of the nose and have also been identified in human testis and sperm. In order to gain further insight into the underlying molecular mechanisms of OR regulation, a bifurcate proteomic strategy was employed. Firstly, the question of stimulus induced plasticity of the olfactory sensory neuron was addressed. Juvenile mice were exposed to either a pulsed or continuous application of an aldehyde odorant, octanal, for 20 days. This was followed by behavioural, electrophysiological and proteomic investigations. Both treated groups displayed peripheral desensitization to octanal as determined by electro-olfactogram recordings. This was not due to anosmia as they were on average faster than the control group in a behavioural food discovery task. To elucidate differentially regulated proteins between the control and treated mice, fluorescent Difference Gel Electrophoresis (DIGE) was used. Seven significantly up-regulated and ten significantly down-regulated gel spots were identified in the continuously treated mice; four and twenty-four significantly up- and down-regulated spots were identified for the pulsed mice, respectively. The spots were excised and proteins were identified using mass spectrometry. Several promising candidate proteins were identified including potential transcription factors, cytoskeletal proteins as well as calcium binding and odorant binding proteins. -
Isolated Relative Afferent Pupillary Defect Secondary to Contralateral Midbrain Compression
OBSERVATION Isolated Relative Afferent Pupillary Defect Secondary to Contralateral Midbrain Compression Cheun Ju Chen, MD; Mia Scheufele, MD; Maushmi Sheth, MD; Amir Torabi, MD; Nick Hogan, MD, PhD; Elliot M. Frohman, MD, PhD Background: Relative afferent pupillary defects are typi- accounts for the relative afferent pupillary defect con- cally related to ipsilateral lesions within the anterior vi- tralateral to the described lesion. sual pathways. Result: Magnetic resonance imaging of the brain revealed a pineal tumor compressing the right rostral midbrain. Objective: To describe a patient who had a workup for headache and was found to have an isolated left relative Conclusion: While rare, a relative afferent pupillary de- afferent pupillary defect without any other neurological fect can occasionally occur secondary to lesions in the findings. postchiasmal pathways. In these circumstances, the pu- pillary defect will be observed to be contralateral to the Design: We review the neuroanatomy of the pupil- side of the lesion. lary light reflex pathway and emphasize the nasotem- poral bias of decussating fiber projections, which Arch Neurol. 2004;61:1451-1453 RELATIVE AFFERENT PUPIL- though retinal fibers concerned with this lary defect (RAPD) is char- reflex transmit information to both the ip- acterized by pupillary dila- silateral and contralateral midbrain, there tion upon illuminating the is a slight crossing bias, with about 53% of eye during the swinging the fibers crossing in the optic chiasm Aflashlight test. The presence of this sign sig- (chiefly derived from the nasal retina) and nifies an abnormality in the transmission 47% remaining ipsilateral. This anatomi- of light information within the pupillary cal organization of the pupillary constric- light constrictor pathway from the retina tor pathway results in the possibility of pro- to the rostral midbrain circuitry involved ducing an RAPD during illumination of the in this reflex. -
Measurement of the Normal Optic Chiasm on Coronal MR Images
Measurement of the Normal Optic Chiasm on Coronal MR Images Andrew L. Wagner, F. Reed Murtagh, Ken S. Hazlett, and John A. Arrington PURPOSE: To develop an objective method for measuring the optic chiasm and to document its normal range in size. METHODS: Measurements of the height and area of the optic chiasm, made on coronal T1-weighted MR images with the use of commercially available region-of-interest software, were obtained in 114 healthy subjects who had a total of 123 MR studies. A normal range and standard deviation were calculated, and the information was broken down by age and sex. RESULTS: The mean area of the optic chiasm was 43.7 mm2, with a standard deviation of 5.21. The mean width was 14.0 mm, with a standard deviation of 1.68. CONCLUSION: The area and width of the optic chiasm can be measured with the use of commercially available software, which allows an objective estimate of the chiasm’s size. Knowledge of the normal size range of the optic chiasm can be helpful in the early detection of some disorders. Index terms: Optic chiasm; Brain, anatomy; Brain, measurement AJNR Am J Neuroradiol 18:723–726, April 1997 The optic chiasm is an important land- months and that had been interpreted as normal. No pa- mark when interpreting magnetic resonance (MR) tient had suspected visual or endocrine abnormalities. All examinations of the brain. A small chiasm can be the examinations had been performed with a 1.5-T Gen- an indication of several disorders, the most com- eral Electric (Milwaukee, Wis) Signa or 1.5-T Siemens mon of which is septooptic dysplasia (1), and a (Cary, NC) Somatom MR system using routine imaging large chiasm can be the result of glioma, menin- protocols, with additional 3-mm T1-weighted contiguous coronal sections used for measurements. -
Personalized Single-Cell Proteogenomics to Distinguish Acute Myeloid Leukemia from Nonmalignant Clonal Hematopoiesis
RESEARCH BRIEF Personalized Single-Cell Proteogenomics to Distinguish Acute Myeloid Leukemia from Nonmalignant Clonal Hematopoiesis Laura W. Dillon1, Jack Ghannam1, Chidera Nosiri1, Gege Gui1, Meghali Goswami1, Katherine R. Calvo2, Katherine E. Lindblad1, Karolyn A. Oetjen1, Matthew D. Wilkerson3,4,5, Anthony R. Soltis3,4, Gauthaman Sukumar4,6, Clifton L. Dalgard5,6, Julie Thompson1, Janet Valdez1, Christin B. DeStefano1, Catherine Lai1, Adam Sciambi7, Robert Durruthy-Durruthy7, Aaron Llanso7, Saurabh Gulati7, Shu Wang7, Aik Ooi7, Pradeep K. Dagur8, J. Philip McCoy8, Patrick Burr9, Yuesheng Li9, and Christopher S. Hourigan1 ABSTRACT Genetic mutations associated with acute myeloid leukemia (AML) also occur in age- related clonal hematopoiesis, often in the same individual. This makes confident assignment of detected variants to malignancy challenging. The issue is particularly crucial for AML posttreatment measurable residual disease monitoring, where results can be discordant between genetic sequencing and flow cytometry. We show here that it is possible to distinguish AML from clonal hematopoiesis and to resolve the immunophenotypic identity of clonal architecture. To achieve this, we first design patient-specific DNA probes based on patient’s whole-genome sequencing and then use them for patient-personalized single-cell DNA sequencing with simultaneous single-cell antibody– oligonucleotide sequencing. Examples illustrate AML arising from DNMT3A- and TET2-mutated clones as well as independently. The ability to personalize single-cell proteogenomic assessment for individual patients based on leukemia-specific genomic features has implications for ongoing AML precision medicine efforts. SIGNIFICANCE: This study offers a proof of principle of patient-personalized customized single-cell proteogenomics in AML including whole-genome sequencing–defined structural variants, currently unmeasurable by commercial “off-the-shelf” panels. -
The Consequences of Pretangle Tau in the Locus Coeruleus Termpanit Chalermpalanupap, Emory University David Weinshenker, Emory University Jacki M
Down but Not Out: The Consequences of Pretangle Tau in the Locus Coeruleus Termpanit Chalermpalanupap, Emory University David Weinshenker, Emory University Jacki M. Rorabaugh, Emory University Journal Title: Neural Plasticity Volume: Volume 2017 Publisher: Hindawi Publishing Corporation | 2017-09-05, Pages 7829507-7829507 Type of Work: Article | Final Publisher PDF Publisher DOI: 10.1155/2017/7829507 Permanent URL: https://pid.emory.edu/ark:/25593/s64c4 Final published version: http://dx.doi.org/10.1155/2017/7829507 Copyright information: © 2017 Termpanit Chalermpalanupap et al. This is an Open Access work distributed under the terms of the Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/). Accessed September 29, 2021 12:12 PM EDT Hindawi Neural Plasticity Volume 2017, Article ID 7829507, 9 pages https://doi.org/10.1155/2017/7829507 Review Article Down but Not Out: The Consequences of Pretangle Tau in the Locus Coeruleus Termpanit Chalermpalanupap, David Weinshenker, and Jacki M. Rorabaugh Department of Human Genetics, Emory University School of Medicine, Atlanta, GA 30322, USA Correspondence should be addressed to Jacki M. Rorabaugh; [email protected] Received 10 March 2017; Revised 20 June 2017; Accepted 20 July 2017; Published 5 September 2017 Academic Editor: Niels Hansen Copyright © 2017 Termpanit Chalermpalanupap et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Degeneration of locus coeruleus (LC) is an underappreciated hallmark of Alzheimer’s disease (AD). The LC is the main source of norepinephrine (NE) in the forebrain, and its degeneration is highly correlated with cognitive impairment and amyloid-beta (Aβ) and tangle pathology. -
In This Issue High-Throughput Single Protein Pulling Backpack Recorders for Zebra Finches a Deeper Look at Proteogenomics Genome
NATURE METHODS | VOL.11 NO.11 | NOVEMBER 2014 IN THIS ISSUE software tool that bins genomic fragments that have Improving tools for synthetic first undergone limited preassembly into contigs. biology Their strategy uses a variational Bayesian approach combining sequence composition and correlated To rapidly and reliably engineer biological abundance across multiple samples to produce networks—one of the promises of synthetic sequence assignments. CONCOCT bins genomes with biology—a larger repertoire of regulatory high precision and recall in simulated and real data, elements and better characterization of their providing higher coverage than can typically be performance are needed. Two groups now deliver reached by single-cell sequencing. on each of these aspects. Smolke and colleagues Brief Communication p1144 present a model to predict the expression of a target gene that is regulated by a microRNA and then extend the model to anticipate the High-throughput single protein behavior of genetic circuits that use protein- responsive microRNA switches to detect the pulling concentration of a nuclear protein in mammalian One of the main technical challenges in making cells. Fussenegger and colleagues create a library single-molecule force spectroscopy measurements of protein-responsive ribozymes for translational control and then design a three-input AND gate has been the method’s low-throughput nature, which in mammalian cells that combines transcriptional has precluded the screening of large protein-variant and translational control. libraries. Nash and colleagues now describe a system Articles p1147, p1154, News and Views p1105 that readily enables thousands of protein pulling measurements. They begin with a microspotted DNA array and synthesize proteins in situ with the aid of A deeper look at proteogenomics microfluidics-based cell-free expression technology.