Plants in Space
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Arabidopsis Thaliana
Downloaded from genome.cshlp.org on September 28, 2021 - Published by Cold Spring Harbor Laboratory Press RESEARCH A Physical Map of Chromosome 2 of Arabidopsis thaliana Eve Ann Zachgo, 2,4 Ming Li Wang, 1'2'4 Julia Dewdney, 1'2 David Bouchez, 3 Christine Carnilleri, 3 Stephen Belmonte, 2 Lu Huang, 2 Maureen Dolan, 2 and Howard M. Goodman 1'2'5 1Department of Genetics, Harvard Medical School and 2Department of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts 02114; 3Laboratoire de Biologie Cellulaire, Institut National de la Recherche Agronomique (INRA), 78026 Versailles CEDEX, France A yeast artificial chromosome (YAC] physical map of chromosome 2 of Arabidopsis thaliana has been constructed by hybridization of 69 DNA markers and 61 YAC end probes to gridded arrays of YAC clones. Thirty-four YACs in four contigs define the chromosome. Complete closure of the map was not attained because some regions of the chromosome were repetitive or were not represented in the YAC library. Based on the sizes of the YACs and their coverage of the chromosome, the length of chromosome 2 is estimated to be at least 18 Mb. These data provide the means for immediately identifying the YACs containing a genetic locus mapped on Arabidopsis chromosome 2. The small flowering plant Arabidopsis thaliana is ters (Maluszynska and Heslop-Harrison 1991; A1- an excellent model system for metabolic, genetic, bini 1994; Copenhaver et al. 1995). We present and developmental studies in plants. Its haploid here a YAC contig physical map of chromosome nuclear genome is small (-100 Mb), consisting of 2 of A. -
SPACE EXPLORERS NEED to BE SPACE FARMERS What We Know and What We Need to Know About Plant Growth in Space
MONOGRAPH Mètode Science Studies Journal, 11 (2021). University of Valencia. DOI: 10.7203/metode.11.14606 Submitted: 10/04/2019. Approved: 04/09/2019. SPACE EXPLORERS NEED TO BE SPACE FARMERS What we know and what we need to know about plant growth in space FF.. JJavieravier MMedinaedina Space exploration will require life support systems, in which plants can provide nutrients, oxygen, moisture, and psychological well-being and eliminate wastes. In alien environments, plants must adapt to a diff erent gravity force, even the zero gravity of spacefl ight. Under these conditions, essential cellular and molecular features related to plant development are altered and changes in gene expression occur. In lunar gravity, the eff ects are comparable to microgravity, while the gravity of Mars produces milder alterations. Nevertheless, it has been possible to develop and reproduce plants in space. Current research seeks to identify signals replacing gravity for driving plant growth, such as light. Counteracting gravitational stress will help in enabling agriculture in extraterrestrial habitats. Keywords: plant biology, International Space Station (ISS), microgravity, root meristem, gene ex- pression. ■ INTRODUCTION lighting and nutrient delivery, but utilizes the cabin environment for temperature control and gas On 10 August 2015, the image of three crewmembers exchange (Figure 1b). of the International Space Station (ISS) eating «The farther and longer humans go away from a lettuce, grown and harvested onboard, impacted Earth, the greater the need to be able to grow plants mass media all over the world. «It was one small bite for food, atmosphere recycling and psychological or man, one giant leap for #NASAVEGGIE and our benefi ts», said Gioia Massa (NASA, 2015), Veggie’s #JourneytoMars. -
2. Going to Mars
aMARTE A MARS ROADMAP FOR TRAVEL AND EXPLORATION Final Report International Space University Space Studies Program 2016 © International Space University. All Rights Reserved. The 2016 Space Studies Program of the International Space University (ISU) was hosted by the Technion – Israel Institute of Technology in Haifa, Israel. aMARTE has been selected as the name representing the Mars Team Project. This choice was motivated by the dual meaning the term conveys. aMARTE first stands for A Mars Roadmap for Travel and Exploration, the official label the team has adopted for the project. Alternatively, aMARTE can be interpreted from its Spanish roots "amarte," meaning "to love," or can also be viewed as "a Marte," meaning "going to Mars." This play on words represents the mission and spirit of the team, which is to put together a roadmap including various disciplines for a human mission to Mars and demonstrate a profound commitment to Mars exploration. The aMARTE title logo was developed based on sections of the astrological symbols for Earth and Mars. The blue symbol under the team's name represents Earth, and the orange arrow symbol is reminiscent of the characteristic color of Mars. The arrow also serves as an invitation to go beyond the Earth and explore our neighboring planet. Electronic copies of the Final Report and the Executive Summary can be downloaded from the ISU Library website at http://isulibrary.isunet.edu/ International Space University Strasbourg Central Campus Parc d’Innovation 1 rue Jean-Dominique Cassini 67400 Illkirch-Graffenstaden France Tel +33 (0)3 88 65 54 30 Fax +33 (0)3 88 65 54 47 e-mail: [email protected] website: www.isunet.edu I. -
Growing Knowledge in Space 1 December 2011, by Stephanie Covey
Growing knowledge in space 1 December 2011, By Stephanie Covey The use of plants to provide a reliable oxygen, food and water source could save the time and money it takes to resupply the International Space Station (ISS), and provide sustainable sources necessary to make long-duration missions a reality. However, before plants can be effectively utilized for space exploration missions, a better understanding of their biology under microgravity is essential. Kennedy partnered with the three groups for four months to provide a rapid turnaround experiment opportunity using the BRIC-16 in Discovery's middeck on STS-131. And while research takes time, the process was accelerated as the end of the Space Shuttle Program neared. Arabidopsis seedlings. Credit: NASA Plants are critical in supporting life on Earth, and with help from an experiment that flew onboard space shuttle Discovery's STS-131 mission, they also could transform living in space. NASA's Kennedy Space Center partnered with the University of Florida, Miami University in Ohio and Samuel Roberts Noble Foundation to perform three different experiments in microgravity. The studies concentrated on the effects microgravity has on plant cell walls, root growth patterns and gene regulation within the plant Undifferentiated Arabidopsis cells. Credit: NASA Arabidopsis thaliana. Each of the studies has future applications on Earth and in space exploration. Howard Levine, a program scientist for the ISS "Any research in plant biology helps NASA for Ground Processing and Research Project Office future long-range space travel in that plants will be and the science lead for BRIC-16, said he sees it part of bioregenerative life support systems," said as a new paradigm in how NASA works spaceflight John Kiss, one of the researchers who participated experiments. -
Mrs. Funmilola Adebisi Oluwafemi National Space Research and Development Agency (NASRDA), Abuja, Nigeria, [email protected]
70th International Astronautical Congress 2019 Paper ID: 48743 oral IAF/IAA SPACE LIFE SCIENCES SYMPOSIUM (A1) Biology in Space (8) Author: Mrs. Funmilola Adebisi Oluwafemi National Space Research and Development Agency (NASRDA), Abuja, Nigeria, [email protected] Mr. Adhithiyan Neduncheran Sapienza University of Rome, Italy, [email protected] Mr. Shaun Andrews University of Bristol, United Kingdom, [email protected] Mr. Di Wu University of Arizona, United States, [email protected] METHODS OF SEEDS PLANTING IN SPACE: SOIL-LESS OR NOT Abstract Botanists, gardeners, and farmers alike have worked for thousands of years to perfect growth in any environment. Plants and humans are ideal companions for space travel. Amongst many other things for space travel, humans consume oxygen and release carbonIVoxide, plants return the favor by consuming carbonIVoxide and releasing oxygen. Therefore, space farming's need has being greatly recognized in space travel starting from plants need as human companion to its need for feeding the astronauts. As on Earth, the method of planting seeds for short-term and the proposed long-term space missions require the same basic ingredients for the plants to grow. It takes nutrients, water, oxygen and a good amount of light to get it grown. Astrobotany as the study of plants in space therefore needs to know how to grow them. Space environment is characterized by microgravity or reduced gravity and radiation; and cannot fully support germination, growth and development of plants. Therefore, the most efficient processes for the development of crops in space can be done through closed, controlled or soil-less cultivation systems. -
Phylogenetic Position and Generic Limits of Arabidopsis (Brassicaceae)
PHYLOGENETIC POSITION Steve L. O'Kane, Jr.2 and Ihsan A. 3 AND GENERIC LIMITS OF Al-Shehbaz ARABIDOPSIS (BRASSICACEAE) BASED ON SEQUENCES OF NUCLEAR RIBOSOMAL DNA1 ABSTRACT The primary goals of this study were to assess the generic limits and monophyly of Arabidopsis and to investigate its relationships to related taxa in the family Brassicaceae. Sequences of the internal transcribed spacer region (ITS-1 and ITS-2) of nuclear ribosomal DNA, including 5.8S rDNA, were used in maximum parsimony analyses to construct phylogenetic trees. An attempt was made to include all species currently or recently included in Arabidopsis, as well as species suggested to be close relatives. Our ®ndings show that Arabidopsis, as traditionally recognized, is polyphyletic. The genus, as recircumscribed based on our results, (1) now includes species previously placed in Cardaminopsis and Hylandra as well as three species of Arabis and (2) excludes species now placed in Crucihimalaya, Beringia, Olimar- abidopsis, Pseudoarabidopsis, and Ianhedgea. Key words: Arabidopsis, Arabis, Beringia, Brassicaceae, Crucihimalaya, ITS phylogeny, Olimarabidopsis, Pseudoar- abidopsis. Arabidopsis thaliana (L.) Heynh. was ®rst rec- netic studies and has played a major role in un- ommended as a model plant for experimental ge- derstanding the various biological processes in netics over a half century ago (Laibach, 1943). In higher plants (see references in Somerville & Mey- recent years, many biologists worldwide have fo- erowitz, 2002). The intraspeci®c phylogeny of A. cused their research on this plant. As indicated by thaliana has been examined by Vander Zwan et al. Patrusky (1991), the widespread acceptance of A. (2000). Despite the acceptance of A. -
Life in Space!
Life in Space! Why do you think humans explore space? Organizations like NASA and scientists of all kinds across the globe are studying space because we want to learn more about where Earth came from, where we are headed, and what else is out there in the vast universe. What about life in the universe outside Earth? Scientists are using exploratory rovers to explore the geology and char acteristics of Mars to l earn w hether life ever existed on t he Red P lanet. Botanists and a stronauts are teaming up to study how we can g row plants as food on the I nternational Space Station and eventually on sediment from other planets. What can you learn and imagine about life in space from your own home here on Earth? 1. The Colors & Science of Martian Soil Why is the surface of Mars red? Rovers have shown us images of our neighbor planet’s dusty, rocky, red-brown surface. If this color reminds you of the rust we find here on earth, it’s because rust and Martian soil both contain a compound called iron oxid e! We can also see shades of gray, white, and red in the silica, ice, and mineral deposits across the surface of Mars. Just like the Earth, the soil and rocks of Mars contain a wide diversity of minerals that take on different shades and colors. The red, rocky, and dry Martian surface. Image: NASA / JPL Rust on iron here on Earth. Rust, or Earth soils contain o rganic materials iron oxide, f orms when iron is that make growing plants possible. -
Committee on Space Research (COSPAR)
COSPAR 2020 AWARDS Press Release (for immediate release) Committee on Space Research (COSPAR) To be presented on 30 January during the 43rd COSPAR Scientific Assembly 28 January – 4 February 2021, Sydney, Australia See below for complete citations and a brief description of COSPAR. - COSPAR Space Science Award for outstanding contributions to space science: William J. Borucki (USA), Astrobiology and Space Research Directorate, NASA Ames Research Center, Moffett Field, California Ken McCracken (Australia), CSIRO and Jellore Technologies, retired, New South Wales - COSPAR International Cooperation Medal for distinguished contributions to space science and work that has contributed significantly to the promotion of international scientific cooperation: John Kiss (USA) and Francisco Javer Medina Díaz (Spain), College of Arts & Sciences, University of North Carolina—Greensboro, Greensboro, North Carolina and PCNPµG Lab (Plant Cell Nucleolus, Proliferation & Microgravity), Centro de Investigaciones Biológicas – CSIC, Madrid - COSPAR William Nordberg Medal commemorating the late William Nordberg and for distinguished contributions to the application of space science in a field covered by COSPAR: Daniel J. McCleese (USA), Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California - COSPAR Harrie Massey Award honoring the memory of Sir Harrie Massey, FRS, for outstanding contributions to the development of space research in which a leadership role is of particular importance: Alexander Held (Australia), CSIRO Centre of -
Biogeography and Diversification of Brassicales
Molecular Phylogenetics and Evolution 99 (2016) 204–224 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Biogeography and diversification of Brassicales: A 103 million year tale ⇑ Warren M. Cardinal-McTeague a,1, Kenneth J. Sytsma b, Jocelyn C. Hall a, a Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada b Department of Botany, University of Wisconsin, Madison, WI 53706, USA article info abstract Article history: Brassicales is a diverse order perhaps most famous because it houses Brassicaceae and, its premier mem- Received 22 July 2015 ber, Arabidopsis thaliana. This widely distributed and species-rich lineage has been overlooked as a Revised 24 February 2016 promising system to investigate patterns of disjunct distributions and diversification rates. We analyzed Accepted 25 February 2016 plastid and mitochondrial sequence data from five gene regions (>8000 bp) across 151 taxa to: (1) Available online 15 March 2016 produce a chronogram for major lineages in Brassicales, including Brassicaceae and Arabidopsis, based on greater taxon sampling across the order and previously overlooked fossil evidence, (2) examine Keywords: biogeographical ancestral range estimations and disjunct distributions in BioGeoBEARS, and (3) determine Arabidopsis thaliana where shifts in species diversification occur using BAMM. The evolution and radiation of the Brassicales BAMM BEAST began 103 Mya and was linked to a series of inter-continental vicariant, long-distance dispersal, and land BioGeoBEARS bridge migration events. North America appears to be a significant area for early stem lineages in the Brassicaceae order. Shifts to Australia then African are evident at nodes near the core Brassicales, which diverged Cleomaceae 68.5 Mya (HPD = 75.6–62.0). -
Coordination of Biradial-To-Radial Symmetry and Tissue Polarity by HD
ARTICLE https://doi.org/10.1038/s41467-021-24550-6 OPEN Coordination of biradial-to-radial symmetry and tissue polarity by HD-ZIP II proteins ✉ Monica Carabelli1,4, Luana Turchi1, Giorgio Morelli 2, Lars Østergaard 3,5 , Ida Ruberti1,5,6 & ✉ Laila Moubayidin 3,4 Symmetry establishment is a critical process in the development of multicellular organs and requires careful coordination of polarity axes while cells actively divide within tissues. For- 1234567890():,; mation of the apical style in the Arabidopsis gynoecium involves a bilateral-to-radial sym- metry transition, a stepwise process underpinned by the dynamic distribution of the plant morphogen auxin. Here we show that SPATULA (SPT) and the HECATE (HEC) bHLH pro- teins mediate the final step in the style radialisation process and synergistically control the expression of adaxial-identity genes, HOMEOBOX ARABIDOPSIS THALIANA 3 (HAT3) and ARABIDOPSIS THALIANA HOMEOBOX 4 (ATHB4). HAT3/ATHB4 module drives radialisation of the apical style by promoting basal-to-apical auxin flow and via a negative feedback mechanism that finetune auxin distribution through repression of SPT expression and cyto- kinin sensitivity. Thus, this work reveals the molecular basis of axes-coordination and hor- monal cross-talk during the sequential steps of symmetry transition in the Arabidopsis style. 1 Institute of Molecular Biology and Pathology, National Research Council, Rome, Italy. 2 Research Centre for Genomics and Bioinformatics, Council for Agricultural Research and Economics (CREA), Rome, Italy. 3 Department of Crop Genetics, John Innes Centre, Norwich, UK. 4These authors contributed ✉ equally: Monica Carabelli, Laila Moubayidin. 5These authors jointly supervised this work: Lars Østergaard, Ida Ruberti. -
CRISPR/Cas9-Mediated Knockout of HOS1 Reveals Its Role in the Regulation of Secondary Metabolism in Arabidopsis Thaliana
plants Article CRISPR/Cas9-Mediated Knockout of HOS1 Reveals Its Role in the Regulation of Secondary Metabolism in Arabidopsis thaliana Yury Shkryl * , Yulia Yugay, Tatiana Avramenko, Valeria Grigorchuk, Tatiana Gorpenchenko, Olga Grischenko and Victor Bulgakov Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch, the Russian Academy of Sciences, 690022 Vladivostok, Russia; [email protected] (Y.Y.); [email protected] (T.A.); [email protected] (V.G.); [email protected] (T.G.); [email protected] (O.G.); [email protected] (V.B.) * Correspondence: [email protected] Abstract: In Arabidopsis, the RING finger-containing E3 ubiquitin ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (HOS1) functions as a main regulator of the cold signaling. In this study, CRISPR/Cas9-mediated targeted mutagenesis of the HOS1 gene in the first exon was performed. DNA sequencing showed that frameshift indels introduced by genome editing of HOS1 resulted in the appearance of premature stop codons, disrupting the open reading frame. Obtained hos1Cas9 mutant plants were compared with the SALK T-DNA insertion mutant, line hos1-3, in terms of their tolerance to abiotic stresses, accumulation of secondary metabolites and expression levels of genes participating in these processes. Upon exposure to cold stress, enhanced tolerance and expression of cold-responsive genes were observed in both hos1-3 and hos1Cas9 plants. The hos1 mutation caused changes in the synthesis of phytoalexins in transformed cells. The content of glucosinolates (GSLs) was down-regulated by 1.5-times, while flavonol glycosides were up-regulated by 1.2 to 4.2 times in transgenic plants. -
Space News Update – September 2020
Space News Update – September 2020 By Pat Williams IN THIS EDITION: • Hints of life on Venus. • NRAO joins space mission to the far side of the Moon to explore the early universe. • SpaceX to launch first Commercial Crew rotation mission to International Space Station. • Second alignment plane of solar system discovered. • Testing Time for Pills in Space. • New small satellite mission to rendezvous with binary asteroids. • Links to other space and astronomy news published in September 2020. Disclaimer - I claim no authorship for the printed material; except where noted (PW). HINTS OF LIFE ON VENUS Artist's impression of Venus, with an inset showing a representation of the phosphine molecules detected in the high cloud decks. Credit: ESO / M. Kornmesser / L. Calçada & NASA / JPL / Caltech An international team of astronomers, led by Professor Jane Greaves of Cardiff University, today announced the discovery of a rare molecule, phosphine, in the clouds of Venus. On Earth, this gas is only made industrially, or by microbes that thrive in oxygen-free environments. Astronomers have speculated for decades that high clouds on Venus could offer a home for microbes, floating free of the scorching surface, but still needing to tolerate very high acidity. The detection of phosphine molecules, which consist of hydrogen and phosphorus, could point to this extra-terrestrial ‘aerial’ life. The team first used the James Page 1 of 18 Clerk Maxwell Telescope (JCMT) in Hawaii to detect the phosphine and then with 45 telescopes of the Atacama Large Millimeter/submillimeter Array (ALMA) in Chile. Both facilities observed Venus at a wavelength of about 1 millimetre, much longer than the human eye can see, only telescopes at high altitude can detect this wavelength effectively.