Input Preparation, Data Visualization & Analysis
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Agx Multiphysics Download
Agx multiphysics download click here to download A patch release of AgX Dynamics is now available for download for all of our licensed customers. This version include some minor. AGX Dynamics is a professional multi-purpose physics engine for simulators, Virtual parallel high performance hybrid equation solvers and novel multi- physics models. Why choose AGX Dynamics? Download AGX product brochure. This video shows a simulation of a wheel loader interacting with a dynamic tree model. High fidelity. AGX Multiphysics is a proprietary real-time physics engine developed by Algoryx Simulation AB Create a book · Download as PDF · Printable version. AgX Multiphysics Toolkit · Age Of Empires III The Asian Dynasties Expansion. Convert trail version Free Download, product key, keygen, Activator com extended. free full download agx multiphysics toolkit from AYS search www.doorway.ru have many downloads related to agx multiphysics toolkit which are hosted on sites like. With AGXUnity, it is possible to incorporate a real physics engine into a well Download from the prebuilt-packages sub-directory in the repository www.doorway.rug: multiphysics. A www.doorway.ru app that runs a physics engine and lets clients download physics data in real Clone or download AgX Multiphysics compiled with Lua support. Agx multiphysics toolkit. Developed physics the was made dynamics multiphysics simulation. Runtime library for AgX MultiPhysics Library. How to repair file. Original file to replace broken file www.doorway.ru Download. Current version: Some short videos that may help starting with AGX-III. Example 1: Finding a possible Pareto front for the Balaban Index in the Missing: multiphysics. -
Designing and Packaging Printer and Scanner Drivers
Designing and Packaging Printer and Scanner Drivers OpenPrinting MC on Linux Plumbers 2020 August 28, 2020 Till Kamppeter, OpenPrinting What we had ● Printer drivers – PPD files – Filters, perhaps also backends – All has to be in CUPS-specific directories ● Scanner drivers – Shared libraries with SANE ABI in SANE-specific directories ● Packaging – Binaries were built specific to destination distro and packaged in DEB or RPM packages – For each distro drivers need to be built, packaged, and tested separately – As files need to be in specific directories drivers cannot be installed with CUPS in a Snap or with scanning user applications in Snaps What we want ● Sandboxed packaging – Snaps – Distribution-independent: Install from Snap Store on any distro running snapd – More security: Every package with all its libraries and files in its own sandbox, fine-grained control for communication between packages – All-Snap distributions ● But – You cannot drop driver files into directories of a snapped CUPS or snapped user applications, Snaps do not see the system’s files – Snaps only communicate via IP or D-Bus, not by files ● Also – CUPS is deprecating support for PPD files, working by itself only in driverless IPP mode. The New Architecture ● Printer/Scanner Applications emulating an IPP device – Easily snappable: Communicates only via IP – Multi-function device support, Printing, Scanning, and Fax Out can be done in one Snap/Application – Web admin interface for vendor/device-specific GUI – Behaves like a network printer/scanner/multi-function -
Open Babel Documentation Release 2.3.1
Open Babel Documentation Release 2.3.1 Geoffrey R Hutchison Chris Morley Craig James Chris Swain Hans De Winter Tim Vandermeersch Noel M O’Boyle (Ed.) December 05, 2011 Contents 1 Introduction 3 1.1 Goals of the Open Babel project ..................................... 3 1.2 Frequently Asked Questions ....................................... 4 1.3 Thanks .................................................. 7 2 Install Open Babel 9 2.1 Install a binary package ......................................... 9 2.2 Compiling Open Babel .......................................... 9 3 obabel and babel - Convert, Filter and Manipulate Chemical Data 17 3.1 Synopsis ................................................. 17 3.2 Options .................................................. 17 3.3 Examples ................................................. 19 3.4 Differences between babel and obabel .................................. 21 3.5 Format Options .............................................. 22 3.6 Append property values to the title .................................... 22 3.7 Filtering molecules from a multimolecule file .............................. 22 3.8 Substructure and similarity searching .................................. 25 3.9 Sorting molecules ............................................ 25 3.10 Remove duplicate molecules ....................................... 25 3.11 Aliases for chemical groups ....................................... 26 4 The Open Babel GUI 29 4.1 Basic operation .............................................. 29 4.2 Options ................................................. -
Rifle Hunting
TABLE OF CONTENTS Hunting and Outdoor Skills Member Manual ACKNOWLEDGEMENTS A. Introduction to Hunting 1. History of Hunting 5 2. Why We Hunt 10 3. Hunting Ethics 12 4. Hunting Laws and Regulations 20 5. Hunter and Landowner Relations 22 6. Wildlife Management and the Hunter 28 7. Careers in Hunting, Shooting Sports and Wildlife Management 35 B. Types of Hunting 1. Hunting with a Rifle 40 2. Hunting with a Shotgun 44 3. Hunting with a Handgun 48 4. Hunting with a Muzzleloading 51 5. Bowhunting 59 6. Hunting with a Camera 67 C. Outdoor and Hunting Equipment 1. Use of Map and Compass 78 2. Using a GPS 83 3. Choosing and Using Binoculars 88 4. Hunting Clothing 92 5. Cutting Tools 99 D. Getting Ready for the Hunt 1. Planning the Hunt 107 2. The Hunting Camp 109 3. Firearm Safety for the Hunter 118 4. Survival in the Outdoors 124 E. Hunting Skills and Techniques 1. Recovering Game 131 2. Field Care and Processing of Game 138 3. Hunting from Stands and Blinds 144 4. Stalking Game Animals 150 5. Hunting with Dogs 154 F. Popular Game Species 1. Hunting Rabbits and Hares 158 2. Hunting Squirrels 164 3. Hunting White-tailed Deer 171 4. Hunting Ring-necked Pheasants 179 5. Hunting Waterfowl 187 6. Hunting Wild Turkeys 193 2 ACKNOWLEDGEMENTS The 4-H Shooting Sports Hunting Materials were first put together about 25 years ago. Since that time there have been periodic updates and additions. Some of the authors are known, some are unknown. Some did a great deal of work; some just shared morsels of their expertise. -
Structural Insight Into Pichia Pastoris Fatty Acid Synthase Joseph S
www.nature.com/scientificreports OPEN Structural insight into Pichia pastoris fatty acid synthase Joseph S. Snowden, Jehad Alzahrani, Lee Sherry, Martin Stacey, David J. Rowlands, Neil A. Ranson* & Nicola J. Stonehouse* Type I fatty acid synthases (FASs) are critical metabolic enzymes which are common targets for bioengineering in the production of biofuels and other products. Serendipitously, we identifed FAS as a contaminant in a cryoEM dataset of virus-like particles (VLPs) purifed from P. pastoris, an important model organism and common expression system used in protein production. From these data, we determined the structure of P. pastoris FAS to 3.1 Å resolution. While the overall organisation of the complex was typical of type I FASs, we identifed several diferences in both structural and enzymatic domains through comparison with the prototypical yeast FAS from S. cerevisiae. Using focussed classifcation, we were also able to resolve and model the mobile acyl-carrier protein (ACP) domain, which is key for function. Ultimately, the structure reported here will be a useful resource for further eforts to engineer yeast FAS for synthesis of alternate products. Fatty acid synthases (FASs) are critical metabolic enzymes for the endogenous biosynthesis of fatty acids in a diverse range of organisms. Trough iterative cycles of chain elongation, FASs catalyse the synthesis of long-chain fatty acids that can produce raw materials for membrane bilayer synthesis, lipid anchors of peripheral membrane proteins, metabolic energy stores, or precursors for various fatty acid-derived signalling compounds1. In addition to their key physiological importance, microbial FAS systems are also a common target of metabolic engineering approaches, usually with the aim of generating short chain fatty acids for an expanded repertoire of fatty acid- derived chemicals, including chemicals with key industrial signifcance such as α-olefns2–6. -
The Interplay of Compile-Time and Run-Time Options for Performance Prediction Luc Lesoil, Mathieu Acher, Xhevahire Tërnava, Arnaud Blouin, Jean-Marc Jézéquel
The Interplay of Compile-time and Run-time Options for Performance Prediction Luc Lesoil, Mathieu Acher, Xhevahire Tërnava, Arnaud Blouin, Jean-Marc Jézéquel To cite this version: Luc Lesoil, Mathieu Acher, Xhevahire Tërnava, Arnaud Blouin, Jean-Marc Jézéquel. The Interplay of Compile-time and Run-time Options for Performance Prediction. SPLC 2021 - 25th ACM Inter- national Systems and Software Product Line Conference - Volume A, Sep 2021, Leicester, United Kingdom. pp.1-12, 10.1145/3461001.3471149. hal-03286127 HAL Id: hal-03286127 https://hal.archives-ouvertes.fr/hal-03286127 Submitted on 15 Jul 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. The Interplay of Compile-time and Run-time Options for Performance Prediction Luc Lesoil, Mathieu Acher, Xhevahire Tërnava, Arnaud Blouin, Jean-Marc Jézéquel Univ Rennes, INSA Rennes, CNRS, Inria, IRISA Rennes, France [email protected] ABSTRACT Both compile-time and run-time options can be configured to reach Many software projects are configurable through compile-time op- specific functional and performance goals. tions (e.g., using ./configure) and also through run-time options (e.g., Existing studies consider either compile-time or run-time op- command-line parameters, fed to the software at execution time). -
Forensic Identification of Unique Kali Systems Through the Use of File Hashes and Names
Forensic Identification of Unique Kali Systems Through the Use of File Hashes and Names Troy Ward January 25, 2021 Troy Ward Table of Contents Introduction .................................................................................................................................................. 4 Kali Linux ....................................................................................................................................................... 4 Methodology ................................................................................................................................................. 4 Analysis ......................................................................................................................................................... 5 Unique Names ............................................................................................................................................... 6 Eth0.lease .................................................................................................................................................. 6 Font Config ................................................................................................................................................ 7 LightDM ..................................................................................................................................................... 8 System.Journal ......................................................................................................................................... -
Papermerge Documentation
Papermerge Feb 29, 2020 Contents 1 Requirements 3 1.1 Python..................................................3 1.2 Imagemagick...............................................3 1.3 Poppler..................................................3 1.4 Tesseract.................................................4 1.5 Database.................................................4 2 Installation 5 2.1 OS Specific Packages..........................................5 2.1.1 1. Web App + Workers Machine................................5 2.1.1.1 Ubuntu Bionic 18.04 (LTS)..............................5 2.1.2 2. Web App Machine......................................6 2.1.2.1 Ubuntu Bionic 18.04 (LTS)..............................6 2.1.3 3. Worker Machine.......................................6 2.2 Manual Way...............................................6 2.2.1 Package Dependencies.....................................6 2.2.2 Web App............................................7 2.2.3 Worker.............................................9 2.2.4 Recurring Commands...................................... 10 2.3 Systemd................................................. 11 2.3.1 Package Dependencies..................................... 11 2.3.2 Web App............................................ 11 2.4 Docker.................................................. 13 2.5 Ansible (Semiautomated)........................................ 13 2.6 Jenkins + Ansible (Fully Automated Deployment)........................... 14 3 Languages Support 15 4 REST API 17 4.1 How It Works?............................................. -
Francisella Novicida Cas9 Interrogates Genomic DNA with Very High Specificity and Can Be Used for Mammalian Genome Editing
Francisella novicida Cas9 interrogates genomic DNA with very high specificity and can be used for mammalian genome editing Sundaram Acharyaa,b,1, Arpit Mishraa,1,2, Deepanjan Paula,1, Asgar Hussain Ansaria,b, Mohd. Azhara,b, Manoj Kumara,b, Riya Rauthana,b, Namrata Sharmaa, Meghali Aicha,b, Dipanjali Sinhaa,b, Saumya Sharmaa,b, Shivani Jaina, Arjun Raya,3, Suman Jainc, Sivaprakash Ramalingama,b, Souvik Maitia,b,d, and Debojyoti Chakrabortya,b,4 aGenomics and Molecular Medicine Unit, Council of Scientific and Industrial Research—Institute of Genomics & Integrative Biology, New Delhi, 110025, India; bAcademy of Scientific & Innovative Research, Ghaziabad, 201002, India; cKamala Hospital and Research Centre, Thalassemia and Sickle Cell Society, Rajendra Nagar, Hyderabad, 500052, India; and dInstitute of Genomics and Integrative Biology (IGIB)-National Chemical Laboratory (NCL) Joint Center, Council of Scientific and Industrial Research—National Chemical Laboratory, Pune, 411008, India Edited by K. VijayRaghavan, Tata Institute of Fundamental Research, Bangalore, India, and approved September 6, 2019 (received for review October 27, 2018) Genome editing using the CRISPR/Cas9 system has been used to has shown variable levels of off targeting due to tolerance of make precise heritable changes in the DNA of organisms. Although mismatches predominantly in the “nonseed” region in the sgRNA, the widely used Streptococcus pyogenes Cas9 (SpCas9) and its wherever these are encountered in the genome (20). To what engineered variants have been efficiently harnessed for numerous extent FnCas9 mediates this high specificity of target interrogation gene-editing applications across different platforms, concerns re- is not known and whether these properties can be harnessed for main regarding their putative off-targeting at multiple loci across highly specific genome editing at a given DNA loci has not been the genome. -
Reinforcement Learning for Manipulation of Collections of Objects Using Physical Force fields
Bachelor’s thesis Czech Technical University in Prague Faculty of Electrical Engineering F3 Department of Control Engineering Reinforcement learning for manipulation of collections of objects using physical force fields Dominik Hodan Supervisor: doc. Ing. Zdeněk Hurák, Ph.D. Field of study: Cybernetics and Robotics May 2020 ii BACHELOR‘S THESIS ASSIGNMENT I. Personal and study details Student's name: Hodan Dominik Personal ID number: 474587 Faculty / Institute: Faculty of Electrical Engineering Department / Institute: Department of Control Engineering Study program: Cybernetics and Robotics II. Bachelor’s thesis details Bachelor’s thesis title in English: Reinforcement learning for manipulation of collections of objects using physical force fields Bachelor’s thesis title in Czech: Posilované učení pro manipulaci se skupinami objektů pomocí fyzikálních silových polí Guidelines: The goal of the project is to explore the opportunities that the framework of reinforcement learning offers for the task of automatic manipulation of collections of objects using physical force fields. In particular, force fields derived from electric and magnetic fields shaped through planar regular arrays of 'actuators' (microelectrodes, coils) will be considered. At least one of the motion control tasks should be solved: 1. Feedback-controlled distribution shaping. For example, it may be desired that a collection of objects initially concentrated in one part of the work arena is finally distributed uniformly all over the surface. 2. Feedback-controlled mixing, in which collections objects of two or several types (colors) - initially separated - are blended. 3. Feedback-controlled Brownian motion, in which every object in the collection travels (pseudo)randomly all over the surface. Bibliography / sources: [1] D. -
Seed Selection for Successful Fuzzing
Seed Selection for Successful Fuzzing Adrian Herrera Hendra Gunadi Shane Magrath ANU & DST ANU DST Australia Australia Australia Michael Norrish Mathias Payer Antony L. Hosking CSIRO’s Data61 & ANU EPFL ANU & CSIRO’s Data61 Australia Switzerland Australia ABSTRACT ACM Reference Format: Mutation-based greybox fuzzing—unquestionably the most widely- Adrian Herrera, Hendra Gunadi, Shane Magrath, Michael Norrish, Mathias Payer, and Antony L. Hosking. 2021. Seed Selection for Successful Fuzzing. used fuzzing technique—relies on a set of non-crashing seed inputs In Proceedings of the 30th ACM SIGSOFT International Symposium on Software (a corpus) to bootstrap the bug-finding process. When evaluating a Testing and Analysis (ISSTA ’21), July 11–17, 2021, Virtual, Denmark. ACM, fuzzer, common approaches for constructing this corpus include: New York, NY, USA, 14 pages. https://doi.org/10.1145/3460319.3464795 (i) using an empty file; (ii) using a single seed representative of the target’s input format; or (iii) collecting a large number of seeds (e.g., 1 INTRODUCTION by crawling the Internet). Little thought is given to how this seed Fuzzing is a dynamic analysis technique for finding bugs and vul- choice affects the fuzzing process, and there is no consensus on nerabilities in software, triggering crashes in a target program by which approach is best (or even if a best approach exists). subjecting it to a large number of (possibly malformed) inputs. To address this gap in knowledge, we systematically investigate Mutation-based fuzzing typically uses an initial set of valid seed and evaluate how seed selection affects a fuzzer’s ability to find bugs inputs from which to generate new seeds by random mutation. -
Hands-On Tutorials of Autodock 4 and Autodock Vina
Hands-on tutorials of AutoDock 4 and AutoDock Vina Pei-Ying Chu (朱珮瑩) Supervisor: Jung-Hsin Lin (林榮信) Research Center for Applied Sciences, Academia Sinica 2018 Frontiers in Computational Drug Design, Academia Sinica, March 16-20, 2018 AutoDock http://autodock.scripps.edu AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. AutoDock 4 is free and is available under the GNU General Public License. 2 AutoDock Vina http://vina.scripps.edu/ Because the scoring functions used by AutoDock 4 and AutoDock Vina are different and inexact, on any given problem, either program may provide a better result. AutoDock Vina is available under the Apache license, allowing commercial and 3 non-commercial use and redistribution. http://autodock.scripps.edu/downloads These programs were installed on VM. 4 http://mgltools.scripps.edu/ AutoDockTools (ADT) is developed to help set up the docking. ADT is included in MGLTools packages. 5 In general, each docking (AutoDock 4 and/or AutoDock Vina) requires: 1. structure of the receptor (protein), in pdbqt format 2. structure of the ligand (small molecule, drug, etc.) in pdbqt format 3. docking and grid parameters (search space) PDBQT format is very similar to PDB format but it includes partial charges ('Q') and AutoDock 4 (AD4) atom types ('T'). • Preparing the ligand involves ensuring that its atoms are assigned the correct AutoDock4 atom types, adding Gasteiger charges if necessary, merging non-polar hydrogens, detecting aromatic carbons if any, and setting up the 'torsion tree'.