Biogeographic Patterns of Chilean Littoral Fishes
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TROPICAL AGRICULTURAL SCIENCE Major Components of Fish Immunity
Pertanika J. Trop. Agric. Sci. 39 (4): 393 - 420 (2016) TROPICAL AGRICULTURAL SCIENCE Journal homepage: http://www.pertanika.upm.edu.my/ Review Article Major Components of Fish Immunity: A Review Firdaus-Nawi, M. and Zamri-Saad, M.* Faculty of Veterinary Medicine, Universiti Putra Malaysia, 43400 Serdang, Selangor, Malaysia ABSTRACT Fish are fascinating creatures with a certain degree of immunity comparable to those of mammals. The fish’s immune system consists of two major components, innate and adaptive immunities. Innate immunity is non-specific and acts as the primary line of protection against pathogen invasion while adaptive immunity is more specific to a certain pathogen/ following adaptation. Innate immunity consists of the non-specific cellular and the non- specific humoral components. The non-specific cellular component consists of toll-like receptors (TLRs), macrophages, neutrophils, eosinophils and non-specific cytotoxic cell while the non-specific humoral component involves lysozyme, the complement, interferons, C-reactive proteins, transferrins and lectins. They work together at the initial stage to prevent pathogen invasion. On the other hand, the adaptive immune system consists of highly specilised systemic cells and processes that are separated into two main components: the humoral and cellular components. Three types of antibodies, the IgM, IgD and IgT, are the major constituents of the humoral immunity, which act on invaded extracellular pathogens. The cytotoxic T-lymphocyte cells are the major component of the cellular -
Darwin and Ichthyology Xvii Darwin’ S Fishes: a Dry Run Xxiii
Darwin’s Fishes An Encyclopedia of Ichthyology, Ecology, and Evolution In Darwin’s Fishes, Daniel Pauly presents a unique encyclopedia of ichthyology, ecology, and evolution, based upon everything that Charles Darwin ever wrote about fish. Entries are arranged alphabetically and can be about, for example, a particular fish taxon, an anatomical part, a chemical substance, a scientist, a place, or an evolutionary or ecological concept. Readers can start wherever they like and are then led by a series of cross-references on a fascinating voyage of interconnected entries, each indirectly or directly connected with original writings from Darwin himself. Along the way, the reader is offered interpretation of the historical material put in the context of both Darwin’s time and that of contemporary biology and ecology. This book is intended for anyone interested in fishes, the work of Charles Darwin, evolutionary biology and ecology, and natural history in general. DANIEL PAULY is the Director of the Fisheries Centre, University of British Columbia, Vancouver, Canada. He has authored over 500 articles, books and papers. Darwin’s Fishes An Encyclopedia of Ichthyology, Ecology, and Evolution DANIEL PAULY Fisheries Centre, University of British Columbia cambridge university press Cambridge, New York, Melbourne, Madrid, Cape Town, Singapore, São Paulo Cambridge University Press The Edinburgh Building, Cambridge cb2 2ru, UK Published in the United States of America by Cambridge University Press, New York www.cambridge.org Information on this title: www.cambridge.org/9780521827775 © Cambridge University Press 2004 This publication is in copyright. Subject to statutory exception and to the provision of relevant collective licensing agreements, no reproduction of any part may take place without the written permission of Cambridge University Press. -
Peces Óseos Marinos (Pisces: Osteichthyes)
Bibliografía sobre Biodiversidad Acuática de Chile (Pisces: Os P eces ÓseosMarinos t eich th y es) Bibliografía sobre Biodiversidad Acuática de Chile Palma, S., P. Báez & G. Pequeño (eds.). 2010 Comité Oceanográfico Nacional, Valparaíso, pp. 315-395 Peces Óseos Marinos (Pisces: Osteichthyes) Germán Pequeño1, Sylvia Sáez1 & Gloria Pizarro2 1Instituto de Zoología “Ernst F. Kilian”, Universidad Austral de Chile. Casilla 567, Valdivia, E-mail: [email protected] 2Librería Punto 4, Valdivia. RESUMEN Se presentan 1.772 referencias sobre taxonomía, sistemática y distribución geográfica de los peces óseos marinos y que siendo marinos penetran en estuarios de Chile. Se consideran peces de la costa de Chile en el continente sudamericano y también de las islas oceánicas chilenas. Palabras clave: peces, bibliografía, biodiversidad, Pacífico suroriental, Chile. ABSTRACT One thousand seven hundred and seventy-two references on taxonomy, systematics and geographical distribution of marine bony fishes and those that being marine enter in estuaries of Chile are presented. The species considered are those from the Chilean continental coast and those from the Chilean oceanic islands. Key words: fishes, bibliography, biodiversity, southeastern, Chile. INTRODUCCIÓN marinos, incursionan en estuarios, consi-derando la costa de Chile que integra el continente sudamericano Actualmente, se podría decir que las especies y aquella de las islas oceánicas. Puede observarse conocidas de peces óseos de aguas marinas chilenas que se trata de un listado bastante restringido, pero alcanzan un número cercano a las 1.050. Se supone que servirá al lector, en los aspectos científicos que dada la falta de exploración, especialmente en el básicos señalados. dominio marino, ese número debería aumentar. -
Teleostei, Gobiesocidae)
A peer-reviewed open-access journal ZooKeys A864: new 35–65 genus (2019) and two new species of miniature clingfishes from temperate southern Australia 35 doi: 10.3897/zookeys.864.34521 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research A new genus and two new species of miniature clingfishes from temperate southern Australia (Teleostei, Gobiesocidae) Kevin W. Conway1,2, Glenn I. Moore3,4, Adam P. Summers5,6 1 Department of Wildlife and Fisheries Sciences and Biodiversity Research and Teaching Collections, Texas A&M University, College Station, TX 77843, USA 2 Research Associate, Ichthyology, Australian Museum Research Institute, 1 William Street, Sydney, NSW 2010, Australia 3 Fish Section, Department of Aquatic Zoology, Western Australian Museum, Locked Bag 49 Welshpool DC WA 6986, Australia 4 School of Biolo- gical Sciences, University of Western Australia, Nedlands, WA 6907, Australia 5 Friday Harbor Laboratories, University of Washington, Friday Harbor, Washington 98250, USA 6 Burke Museum of Natural History and Culture, University of Washington, Seattle, WA 98105, USA Corresponding author: Kevin W. Conway ([email protected]) Academic editor: David Morgan | Received 15 March 2019 | Accepted 31 May 2019 | Published 15 July 2019 http://zoobank.org/5B236AA0-725A-478D-96D4-6B8F366126D4 Citation: Conway KW, Moore GI, Summers AP (2019) A new genus and two new species of miniature clingfishes from temperate southern Australia (Teleostei, Gobiesocidae). ZooKeys 864: 35–65. https://doi.org/10.3897/ zookeys.864.34521 Abstract A new genus and two new species of miniature clingfishes are described based on specimens collected from dense stands of macroalgae in intertidal and shallow subtidal areas along the coast of southern Australia. -
KING-THESIS-2017.Pdf (2.949Mb)
MOLECULAR PHYLOGENETIC INVESTIGATION OF THE CLINGFISHES (TELEOSTEI: GOBIESOCIDAE) A Thesis by CRAGEN DANIELLE KING Submitted to the Office of Graduate and Professional Studies of Texas A&M University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Chair of Committee, Kevin W. Conway Committee Members, Gary Voelker David Portnoy Interdisciplinary Faculty Chair, Duncan MacKenzie December 2017 Major Subject: Marine Biology Copyright 2017 Cragen Danielle King ABSTRACT Currently, there are roughly 170 species of clingfishes (family Gobiesocidae) divided between ten subfamilies in a “phenetic” classification scheme proposed over 60 years ago. Recently, an alternative classification scheme was proposed which included only two subfamilies. For this study, a large scale multi-locus investigation on the phylogenetic relationships of the Gobiesocidae was conducted using both mitochondrial and nuclear DNA sequence data to assess whether the two available classification schemes reflect the evolutionary relationships of the group. Phylogenetic hypotheses are obtained from Bayesian and Maximum Likelihood analyses of two mitochondrial (12S and COI; 1062 bp) and five nuclear genes (ENC1, GLYT, MYH6, SH3PX3, and ZIC1; 3785 bp) for 81 species of clingfishes. Four of the ten subfamilies (Aspasminae, Diademichthyinae, Diplocrepinae, and Gobiesocinae) and four genera (Aspasmichthys, Cochleoceps, Lepadichthys, and Lepadogaster) are obtained as not monophyletic. The resulting topologies also do not recover the two-subfamily classification scheme as useful for classifying clingfishes because subfamily Cheilobranchinae is obtained as a monophyletic group that is deeply embedded inside the second subfamily Gobiesocinae. The two available classification schemes and their included subfamilies are discussed in detail. ii DEDICATION I dedicate this thesis to my grandparents, parents, siblings, and to the Smiths for all of their love and support. -
The Molecular Evolution of Rhodopsin in Marine-Derived
THE MOLECULAR EVOLUTION OF RHODOPSIN IN MARINE-DERIVED AND OTHER FRESHWATER FISHES by Alexander Van Nynatten A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Department of Cell and Systems Biology University of Toronto © Copyright by Alexander Van Nynatten (2019) THE MOLECULAR EVOLUTION OF RHODOPSIN IN MARINE-DERIVED AND OTHER FRESHWATER FISHES A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Department of Cell and Systems Biology University of Toronto © Copyright by Alexander Van Nynatten (2019) ABSTRACT Visual system evolution can be influenced by the spectral properties of light available in the environment. Variation in the dim-light specialized visual pigment rhodopsin is thought to result in functional shifts that optimize its sensitivity in relation to ambient spectral environments. Marine and freshwater environments have been shown to be characterized by different spectral properties and might be expected to place the spectral sensitivity of rhodopsin under different selection pressures. In Chapter two, I show that the rate ratio of non- synonymous to synonymous substitutions is significantly elevated in the rhodopsin gene of a South American clade of freshwater anchovies with marine ancestry. This signature of positive selection is not observed in the rhodopsin gene of the marine sister clade or in non-visual genes. ii In Chapter three I functionally characterize the effects of positively selected substitutions occurring on another independent invasion of freshwater made by ancestrally marine croakers. In vitro spectroscopic assays on ancestrally resurrected rhodopsin pigments reveal a red-shift in peak spectral sensitivity along the transitional branch, consistent with the wavelengths of light illuminating freshwater environments. -
Cryptic Diversity and Venom Glands in Western Atlantic Clingfishes of the Genus Acyrtus (Teleostei: Gobiesocidae)
Cryptic Diversity and Venom Glands in Western Atlantic Clingfishes of the Genus Acyrtus (Teleostei: Gobiesocidae) Kevin W. Conway1*, Carole Baldwin2, Macaulay D. White3¤ 1 Department of Wildlife and Fisheries Sciences and Biodiversity Research and Teaching Collections, Texas A&M University, College Station, Texas, United States of America, 2 Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington D. C., United States of America, 3 Undergraduate Degree Program, Department of Wildlife and Fisheries Sciences, Texas A&M University, College Station, Texas, United States of America Abstract Examination of genetic data (mitochondrial cytochrome c oxidase I) for western Atlantic clingfishes revealed two distinct lineages within a group of individuals originally identified as Acyrtus artius. Subsequent investigation of preserved voucher specimens was conducted to reconcile the genetic data and the existing classification, which is based on morphology. In addition to discovering that one of the genetic lineages is an undescribed species, which we describe as Acyrtus lanthanum, new species, we found that the nominal species Acyrtus artius has a putative venom gland associated with the subopercle that has been overlooked since the species was described nearly 60 years ago. The new species lacks the subopercular gland as does Acyrtus rubiginosus, but one is present in the related Arcos nudus. Venom glands have not been reported previously for the Gobiesocidae, and the venom gland described herein for Acyrtus and Arcos represents the first example in teleost fishes of a venom gland associated with the subopercle. Citation: Conway KW, Baldwin C, White MD (2014) Cryptic Diversity and Venom Glands in Western Atlantic Clingfishes of the Genus Acyrtus (Teleostei: Gobiesocidae). -
Comparison of Parasite Diversity of Intertidal Fish Assemblages From
Revista de Biología Marina y Oceanografía Vol. 52, N°3: 505-521, diciembre 2017 DOI 10.4067/S0718-19572017000300008 ARTICLE Comparison of parasite diversity of intertidal fish assemblages from central California and central Chile Comparación de la diversidad parasitaria de ensambles de peces intermareales de las costas de California y Chile central Ítalo Fernández-Cisternas1, Mario George-Nascimento2 and F. Patricio Ojeda1* 1Departamento de Ecología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O’Higgins 340, CP 6513677, Santiago, Chile.*[email protected] 2Departamento de Ecología, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Alonso de Ribera 2850, Concepción, Chile Resumen.- Las costas de Chile y California central representan importantes puntos de comparación para el estudio de convergencias ecológicas como la composición de parásitos en distintos hospederos. Ambas costas presentan similares condiciones ambientales junto con compartir muchas familias de distintas especies. Se analizó la diversidad parasitaria de especies de peces de ambas zonas comparando si existe similitud entre estas faunas, además se determinó la presencia de 6 grupos taxonómicos de parásitos a través de la literatura y en bases de datos para cada zona (Chile y California). Se creó una matriz de presencia ausencia para las especies de peces estudiadas de ambas zonas y se realizó un análisis de similitud para probar si la composición parasitaria era similar. Los taxones de parásitos mayormente encontrados en peces de California Central correspondieron a digeneos y nemátodos mientras que en Chile central se encontró una mayor diversidad (Digenea, Annelida, Copepoda, Acanthocephala y Nematoda). El análisis de similitud mostró que las comunidades parasitarias entre Chile y California son diferentes significativamente, sin embargo, se obtuvieron sobreposiciones en la diversidad parasitaria agrupándose los hospedadores en 3 grupos, uno de los cuales estuvo conformado por hospedadores de ambas zonas. -
CABO DE HORNOS - DIEGO RAMÍREZ BIODIVERSIDAD Y PROPUESTA DE CONSERVACIÓN Julio Del 2017
CABO DE HORNOS - DIEGO RAMÍREZ BIODIVERSIDAD Y PROPUESTA DE CONSERVACIÓN Julio del 2017 National Geographic Pristine Seas Waitt Foundation 2 COMO CITAR ESTE DOCUMENTO: Salinas-de-León P, Friedlander A, Ballesteros E, Henning B, Hune M, Sala E. 2017. Cabo de Hornos - Diego Ramírez. Biodiversidad y propuesta de conservación. Informe técnico para el Gobierno de Chile. National Geographic Pristine Seas, Washington, D.C. 79pp ÍNDICE DE CONTENIDOS RESUMEN EJECUTIVO . .4 INTRODUCCIÓN . 6 ECOSISTEMAS SUBMARINOS . .11 UN GRAN ECOSISTEMA PELÁGICO . 46 AMENAZAS . 50 NECESIDADES DE CONSERVACIÓN. .64 BIBLIOGRAFÍA . 67 ANEXOS . 74 4 RESUMEN EJECUTIVO Chile se ha convertido en un líder mundial en conservación al crear los dos parques marinos más grandes de América alrededor de islas oceánicas. Hoy el desafío es ampliar ese liderazgo para cubrir de manera representativa otros ecosistemas de Chile. La Región de Magallanes presenta una oportunidad única para crear el parque marino más grande e importante del Cono Sur en la zona de Cabo de Hornos y las islas Diego Ramírez. Los archipiélagos más australes del continente americano albergan un ecosistema marino- terrestre único e intacto. Su valor ecológico es irremplazable: ◾◾ Un ecosistema marino prístino de alta productividad. ◾◾ Los fondos costeros albergan extensos bosques de kelp, auténticas catedrales submarinas donde habitan innumerables especies como la centolla. ◾◾ El abundante krill, base de la cadena alimentaria, sostiene a pingüinos, sardinas y ballenas. ◾◾ Abundantes colonias de lobos marinos, elefantes marinos, y cientos de miles de aves marinas – incluyendo a especies amenazadas. ◾◾ Es la puerta natural de Chile a la Antártida. AMENAZAS ◾◾ La pesca industrial en la región ya ha sobreexplotado especies como el bacalo de profundidad, la merluza austral y la centolla. -
Letter from the Editors
ETHNOBIOLOGY LETTERS Research Communication Peruvian Children’s Folk Taxonomy of Marine Animals José Pizarro-Neyra1 Author Address: 1Proyecto Nuestro Medio Ambiente Marino, Perú [email protected] Received: June 18th 2011 Volume 2:50-57 Published: September 9th 2011 © 2011 Society of Ethnobiology Abstract: Free listing was used to obtain names of marine animals from 234 Peruvian children with families involved in fishing activities. They live in the fishing towns of Vila-vila, Morro Sama and Ilo, located in Southern Peru. Fishes, birds and the category “other marine animal” were used for the classification of marine fauna by children. The group of 6-8 year-olds shows a mean frequency of 19.7 names per child, while the group of 9-11 year-olds shows a mean frequency of 25.7 names per child. Folk species of fish is the most frequently recorded category with a predominance of coastal species and with a mean frequency of 7.56 and 11.51 names per child for the groups of 6-8 year-olds and 9-11 year-olds, respectively. In contrast, bird names are less frequently recorded in the lists. Some bird and mollusc names have lexical under-differentiation at a generic level and apparently have lower cultural significance than fish. Children’s classification in different levels of organization is evidence of a folk biology. The folk taxonomy of marine animals could be influenced by the lesser cognitive development of younger children and the ecological salience of some species. Some species with coastal habitat exhibit a high dominance index of folk names. -
Marine Biodiversity at the End of the World: Cape Horn and Diego Ramı´Rez Islands
RESEARCH ARTICLE Marine biodiversity at the end of the world: Cape Horn and Diego RamõÂrez islands Alan M. Friedlander1,2*, Enric Ballesteros3, Tom W. Bell4, Jonatha Giddens2, Brad Henning5, Mathias HuÈne6, Alex Muñoz1, Pelayo Salinas-de-LeoÂn1,7, Enric Sala1 1 Pristine Seas, National Geographic Society, Washington DC, United States of America, 2 Fisheries Ecology Research Laboratory, University of Hawai`i, Honolulu, Hawai`i, United States of America, 3 Centre d0Estudis AvancËats (CEAB-CSIC), Blanes, Spain, 4 Department of Geography, University of California Los Angeles, Los Angeles, California, United States of America, 5 Remote Imaging Team, National Geographic Society, Washington DC, United States of America, 6 FundacioÂn IctioloÂgica, Santiago, Chile, 7 Charles a1111111111 Darwin Research Station, Puerto Ayora, GalaÂpagos Islands, Ecuador a1111111111 a1111111111 * [email protected] a1111111111 a1111111111 Abstract The vast and complex coast of the Magellan Region of extreme southern Chile possesses a diversity of habitats including fjords, deep channels, and extensive kelp forests, with a OPEN ACCESS unique mix of temperate and sub-Antarctic species. The Cape Horn and Diego RamõÂrez Citation: Friedlander AM, Ballesteros E, Bell TW, archipelagos are the most southerly locations in the Americas, with the southernmost kelp Giddens J, Henning B, HuÈne M, et al. (2018) Marine biodiversity at the end of the world: Cape forests, and some of the least explored places on earth. The giant kelp Macrocystis pyrifera Horn and Diego RamõÂrez islands. PLoS ONE 13(1): plays a key role in structuring the ecological communities of the entire region, with the large e0189930. https://doi.org/10.1371/journal. brown seaweed Lessonia spp. -
Redalyc.Comparison of Parasite Diversity of Intertidal Fish
Revista de Biología Marina y Oceanografía ISSN: 0717-3326 [email protected] Universidad de Valparaíso Chile Fernández-Cisternas, Ítalo; George-Nascimento, Mario; Ojeda, F. Patricio Comparison of parasite diversity of intertidal fish assemblages from central California and central Chile Revista de Biología Marina y Oceanografía, vol. 52, núm. 3, diciembre, 2017, pp. 505-521 Universidad de Valparaíso Viña del Mar, Chile Available in: http://www.redalyc.org/articulo.oa?id=47954027008 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Revista de Biología Marina y Oceanografía Vol. 52, N°3: 505-521, diciembre 2017 ARTICLE Comparison of parasite diversity of intertidal fish assemblages from central California and central Chile Comparación de la diversidad parasitaria de ensambles de peces intermareales de las costas de California y Chile central Ítalo Fernández-Cisternas 1, Mario George-Nascimento 2 and F. Patricio Ojeda 1* 1Departamento de Ecología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O’Higgins 340, CP 6513677, Santiago, Chile.*[email protected] 2Departamento de Ecología, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Alonso de Ribera 2850, Concepció n, Chile Resumen .- Las costas de Chile y California central representan importantes puntos de comparación para el estudio de convergencias ecológicas como la composición de parásitos en distintos hospederos. Ambas costas presentan similares condiciones ambientales junto con compartir muchas familias de distintas especies. Se analizó la diversidad parasitaria de especies de peces de ambas zonas comparando si existe similitud entre estas faunas, además se determinó la presencia de 6 grupos taxonómicos de parásitos a través de la literatura y en bases de datos para cada zona (Chile y California).