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From South Africa
First report of the isolation of entomopathogenic AUTHORS: nematode Steinernema australe (Rhabditida: Tiisetso E. Lephoto1 Vincent M. Gray1 Steinernematidae) from South Africa AFFILIATION: 1 Department of Microbiology and A survey was conducted in Walkerville, south of Johannesburg (Gauteng, South Africa) between 2012 Biotechnology, University of the Witwatersrand, Johannesburg, and 2016 to ascertain the diversity of entomopathogenic nematodes in the area. Entomopathogenic South Africa nematodes are soil-dwelling microscopic worms with the ability to infect and kill insects, and thus serve as eco-friendly control agents for problem insects in agriculture. Steinernematids were recovered in 1 out CORRESPONDENCE TO: Tiisetso Lephoto of 80 soil samples from uncultivated grassland; soil was characterised as loamy. The entomopathogenic nematodes were identified using molecular and morphological techniques. The isolate was identified as EMAIL: Steinernema australe. This report is the first of Steinernema australe in South Africa. S. australe was first [email protected] isolated worldwide from a soil sample obtained from the beach on Isla Magdalena – an island in the Pacific DATES: Ocean, 2 km from mainland Chile. Received: 31 Jan. 2019 Revised: 21 May 2019 Significance: Accepted: 26 Aug. 2019 • Entomopathogenic nematodes are only parasitic to insects and are therefore important in agriculture Published: 27 Nov. 2019 as they can serve as eco-friendly biopesticides to control problem insects without effects on the environment, humans and other animals, unlike chemical pesticides. HOW TO CITE: Lephoto TE, Gray VM. First report of the isolation of entomopathogenic Introduction nematode Steinernema australe (Rhabditida: Steinernematidae) Entomopathogenic nematodes are one of the most studied microscopic species of nematodes because of their from South Africa. -
Monophyly of Clade III Nematodes Is Not Supported by Phylogenetic Analysis of Complete Mitochondrial Genome Sequences
UC Davis UC Davis Previously Published Works Title Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences Permalink https://escholarship.org/uc/item/7509r5vp Journal BMC Genomics, 12(1) ISSN 1471-2164 Authors Park, Joong-Ki Sultana, Tahera Lee, Sang-Hwa et al. Publication Date 2011-08-03 DOI http://dx.doi.org/10.1186/1471-2164-12-392 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Park et al. BMC Genomics 2011, 12:392 http://www.biomedcentral.com/1471-2164/12/392 RESEARCHARTICLE Open Access Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences Joong-Ki Park1*, Tahera Sultana2, Sang-Hwa Lee3, Seokha Kang4, Hyong Kyu Kim5, Gi-Sik Min2, Keeseon S Eom6 and Steven A Nadler7 Abstract Background: The orders Ascaridida, Oxyurida, and Spirurida represent major components of zooparasitic nematode diversity, including many species of veterinary and medical importance. Phylum-wide nematode phylogenetic hypotheses have mainly been based on nuclear rDNA sequences, but more recently complete mitochondrial (mtDNA) gene sequences have provided another source of molecular information to evaluate relationships. Although there is much agreement between nuclear rDNA and mtDNA phylogenies, relationships among certain major clades are different. In this study we report that mtDNA sequences do not support the monophyly of Ascaridida, Oxyurida and Spirurida (clade III) in contrast to results for nuclear rDNA. Results from mtDNA genomes show promise as an additional independently evolving genome for developing phylogenetic hypotheses for nematodes, although substantially increased taxon sampling is needed for enhanced comparative value with nuclear rDNA. -
Species Variability and Connectivity in the Deep Sea: Evaluating Effects of Spatial Heterogeneity and Hydrodynamic Effects]
Supplementary material for [L Lins], [2016], [Species variability and connectivity in the deep sea: evaluating effects of spatial heterogeneity and hydrodynamic effects] Species variability and connectivity in the deep sea: evaluating effects of spatial heterogeneity and hydrodynamic effects Supplementary material for [L Lins], [2016], [Species variability and connectivity in the deep sea: evaluating effects of spatial heterogeneity and hydrodynamic effects] Supplementary material for [L Lins], [2016], [Species variability and connectivity in the deep sea: evaluating effects of spatial heterogeneity and hydrodynamic effects] Supplementary Figure 1: Partial-18S rDNA phylogeny of Nematoda: Chromadorea. The inferred relationships support a broad taxonomic representation of nematodes in samples from lower shelf and upper slope at the West-Iberian Margin and furthermore indicate neither geographic nor depth clustering between ‘deep’ and ‘shallow’ taxa at any level of the tree topology. Reconstruction of nematode 18S relationships was conducted using Maximum Likelihood. Bootstrap support values were generated using 1000 replicates and are presented as node support. The analyses were performed by means of Randomized Axelerated Maximum Likelihood (RAxML). Branch (line) width represents statistical support. Sequences retrieved from Genbank are represented by their Genbank Accession numbers. Orders and Families are annotated as branch labels. PERMANOVA table of results (2-factor design) Source df SS MS Pseudo-F P(perm) Unique perms Depth 1 105.29 -
Entomopathogenic Nematodes (Nematoda: Rhabditida: Families Steinernematidae and Heterorhabditidae) 1 Nastaran Tofangsazi, Steven P
EENY-530 Entomopathogenic Nematodes (Nematoda: Rhabditida: families Steinernematidae and Heterorhabditidae) 1 Nastaran Tofangsazi, Steven P. Arthurs, and Robin M. Giblin-Davis2 Introduction Entomopathogenic nematodes are soft bodied, non- segmented roundworms that are obligate or sometimes facultative parasites of insects. Entomopathogenic nema- todes occur naturally in soil environments and locate their host in response to carbon dioxide, vibration, and other chemical cues (Kaya and Gaugler 1993). Species in two families (Heterorhabditidae and Steinernematidae) have been effectively used as biological insecticides in pest man- agement programs (Grewal et al. 2005). Entomopathogenic nematodes fit nicely into integrated pest management, or IPM, programs because they are considered nontoxic to Figure 1. Infective juvenile stages of Steinernema carpocapsae clearly humans, relatively specific to their target pest(s), and can showing protective sheath formed by retaining the second stage be applied with standard pesticide equipment (Shapiro-Ilan cuticle. et al. 2006). Entomopathogenic nematodes have been Credits: James Kerrigan, UF/IFAS exempted from the US Environmental Protection Agency Life Cycle (EPA) pesticide registration. There is no need for personal protective equipment and re-entry restrictions. Insect The infective juvenile stage (IJ) is the only free living resistance problems are unlikely. stage of entomopathogenic nematodes. The juvenile stage penetrates the host insect via the spiracles, mouth, anus, or in some species through intersegmental membranes of the cuticle, and then enters into the hemocoel (Bedding and Molyneux 1982). Both Heterorhabditis and Steinernema are mutualistically associated with bacteria of the genera Photorhabdus and Xenorhabdus, respectively (Ferreira and 1. This document is EENY-530, one of a series of the Department of Entomology and Nematology, UF/IFAS Extension. -
First Report and Comparative Study of Steinernema Surkhetense (Rhabditida: Steinernematidae) and Its Symbiont Bacteria from Subcontinental India
Journal of Nematology 49(1):92–102. 2017. Ó The Society of Nematologists 2017. First Report and Comparative Study of Steinernema surkhetense (Rhabditida: Steinernematidae) and its Symbiont Bacteria from Subcontinental India 1 1 1 2 3 AASHIQ HUSSAIN BHAT, ISTKHAR, ASHOK KUMAR CHAUBEY, VLADIMIR PUzA, AND ERNESTO SAN-BLAS Abstract: Two populations (CS19 and CS20) of entomopathogenic nematodes were isolated from the soils of vegetable fields from Bijnor district, India. Based on morphological, morphometrical, and molecular studies, the nematodes were identified as Steinernema surkhetense. This work represents the first report of this species in India. The infective juveniles (IJs) showed morphometrical and morphological differences, with the original description based on longer IJs size. The IJs of the Indian isolates possess six ridges in their lateral field instead of eight reported in the original description. The analysis of ITS-rDNA sequences revealed nucleotide differences at 345, 608, and 920 positions in aligned data. No difference was observed in D2-D3 domain. The S. surkhetense COI gene was studied for the first time as well as the molecular characterization of their Xenorhabdus symbiont using the sequences of recA and gyrB genes revealing Xenorhabdus stockiae as its symbiont. These data, together with the finding of X. stockiae, suggest that this bacterium is widespread among South Asian nematodes from the ‘‘carpocapsae’’ group. Virulence of both isolates was tested on Spodoptera litura. The strain CS19 was capable to kill the larvae with 31.78 IJs at 72 hr, whereas CS20 needed 67.7 IJs. Key words: D2-D3 domain, entomopathogenic nematode, ITS-rDNA, mt COI gene, Xenorhabdus stockiae. -
JOURNAL of NEMATOLOGY Article | DOI: 10.21307/Jofnem-2020-089 E2020-89 | Vol
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2020-089 e2020-89 | Vol. 52 Isolation, identification, and pathogenicity of Steinernema carpocapsae and its bacterial symbiont in Cauca-Colombia Esteban Neira-Monsalve1, Natalia Carolina Wilches-Ramírez1, Wilson Terán1, María del Pilar Abstract 1 Márquez , Ana Teresa In Colombia, identification of entomopathogenic nematodes (EPN’s) 2 Mosquera-Espinosa and native species is of great importance for pest management 1, Adriana Sáenz-Aponte * programs. The aim of this study was to isolate and identify EPNs 1Biología de Plantas y Sistemas and their bacterial symbiont in the department of Cauca-Colombia Productivos, Departamento de and then evaluate the susceptibility of two Hass avocado (Persea Biología, Pontificia Universidad americana) pests to the EPNs isolated. EPNs were isolated from soil Javeriana, Bogotá, Colombia. samples by the insect baiting technique. Their bacterial symbiont was isolated from hemolymph of infected Galleria mellonella larvae. 2 Departamento de Ciencias Both organisms were molecularly identified. Morphological, and Naturales y Matemáticas, biochemical cha racterization was done for the bacteria. Susceptibility Pontificia Universidad Javeriana, of Epitrix cucumeris and Pandeleteius cinereus adults was evaluated Cali, Colombia. by individually exposing adults to 50 infective juveniles. EPNs were *E-mail: adriana.saenz@javeriana. allegedly detected at two sampled sites (natural forest and coffee edu.co cultivation) in 5.8% of the samples analyzed. However, only natural forest EPN’s could be isolated and multiplied. The isolate was identified This paper was edited by as Steinernema carpocapsae BPS and its bacterial symbiont as Raquel Campos-Herrera. Xenorhabus nematophila BPS. Adults of both pests were susceptible Received for publication to S. -
Functional Diversity of Soil Nematodes in Relation to the Impact of Agriculture—A Review
diversity Review Functional Diversity of Soil Nematodes in Relation to the Impact of Agriculture—A Review Stela Lazarova 1,* , Danny Coyne 2 , Mayra G. Rodríguez 3 , Belkis Peteira 3 and Aurelio Ciancio 4,* 1 Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 2 Y. Gagarin Str., 1113 Sofia, Bulgaria 2 International Institute of Tropical Agriculture (IITA), Kasarani, Nairobi 30772-00100, Kenya; [email protected] 3 National Center for Plant and Animal Health (CENSA), P.O. Box 10, Mayabeque Province, San José de las Lajas 32700, Cuba; [email protected] (M.G.R.); [email protected] (B.P.) 4 Consiglio Nazionale delle Ricerche, Istituto per la Protezione Sostenibile delle Piante, 70126 Bari, Italy * Correspondence: [email protected] (S.L.); [email protected] (A.C.); Tel.: +359-8865-32-609 (S.L.); +39-080-5929-221 (A.C.) Abstract: The analysis of the functional diversity of soil nematodes requires detailed knowledge on theoretical aspects of the biodiversity–ecosystem functioning relationship in natural and managed terrestrial ecosystems. Basic approaches applied are reviewed, focusing on the impact and value of soil nematode diversity in crop production and on the most consistent external drivers affecting their stability. The role of nematode trophic guilds in two intensively cultivated crops are examined in more detail, as representative of agriculture from tropical/subtropical (banana) and temperate (apple) climates. The multiple facets of nematode network analysis, for management of multitrophic interactions and restoration purposes, represent complex tasks that require the integration of different interdisciplinary expertise. Understanding the evolutionary basis of nematode diversity at the field Citation: Lazarova, S.; Coyne, D.; level, and its response to current changes, will help to explain the observed community shifts. -
Characterization of Novel Xenorhabdus- Steinernema Associations and Identification of Novel Antimicrobial Compounds Produced by Xenorhabdus Khoisanae
Characterization of Novel Xenorhabdus- Steinernema Associations and Identification of Novel Antimicrobial Compounds Produced by Xenorhabdus khoisanae by Jonike Dreyer Thesis presented in partial fulfilment of the requirements for the degree of Master of Science in the Faculty of Science at Stellenbosch University Supervisor: Prof. L.M.T. Dicks Co-supervisor: Dr. A.P. Malan March 2018 Stellenbosch University https://scholar.sun.ac.za Declaration By submitting this thesis electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. March 2018 Copyright © 2018 Stellenbosch University All rights reserved ii Stellenbosch University https://scholar.sun.ac.za Abstract Xenorhabdus bacteria are closely associated with Steinernema nematodes. This is a species- specific association. Therefore, a specific Steinernema species is associated with a specific Xenorhabdus species. During the Xenorhabdus-Steinernema life cycle the nematodes infect insect larvae and release the bacteria into the hemocoel of the insect by defecation. The bacteria and nematodes produce several exoenzymes and toxins that lead to septicemia, death and bioconversion of the insect. This results in the proliferation of both the nematodes and bacteria. When nutrients are depleted, nematodes take up Xenorhabdus cells and leave the cadaver in search of their next prey. Xenorhabdus produces various broad-spectrum bioactive compounds during their life cycle to create a semi-exclusive environment for the growth of the bacteria and their symbionts. -
Chapter 6 Phylogeny and Evolution
NMP5[v.2007/04/19 7:46;] Prn:21/05/2007; 12:39 Tipas:?? F:nmp506.tex; /Austina p. 1 (72-184) Nematology Monographs & Perspectives, 2007, Vol. 5, 693-733 Chapter 6 Phylogeny and evolution Byron J. ADAMS,ScottM.PEAT and Adler R. DILLMAN Microbiology & Molecular Biology Department, and Evolutionary Ecology Laboratory, Brigham Young University, Provo, UT 84602-5253, USA Introduction Nematodes originated during the Precambrian explosion over 500 million years ago (Wray et al., 1996; Ayala & Rzhetsky, 1998; Rod- riguez-Trelles et al., 2002). The phylogenetic position of the Nematoda relative to other metazoans has historically been one of contention. Originally circumscribed within the Vermes Linnaeus, 1758 and later the Aschelminthes Grobben, 1910 (Claus & Grobben, 1910), the Nematoda are now believed to belong to a clade of moulting animals, the Ecdysozoa (Aguinaldo et al., 1997), and share a most recent common ancestor with arthropods, kinorhynchs, nematomorphs, onychophorans, priapulids and tardigrades. ORIGINS OF ENTOMOPATHOGENIC NEMATODES (EPN) Entomopathogenic nematodes of the Steinernematidae and Het- erorhabditidae are not monophyletic, but likely began independently to explore biotic relationships with arthropods and Gram-negative enteric bacteria (Enterobacteriaceae) by the mid-Palaeozoic (approximately 350 million years ago) (Poinar, 1993). Their origins were probably not syn- chronous and the ages of their respective lineages appear to be signif- icantly different. Evidence for the disparate origins and relative age of these Families is illustrated in Figure 240. Assuming even a somewhat sloppy molecular clock, the long branch lengths of Steinernema, both within the genus and relative to its most recent common ancestor, imply that it has been evolving independently of other nematode lineages for a longer period of time than Heterorhabditis. -
Practical Black Vine Weevil Management
Practical Black Vine Weevil Management Source: JARS V57:No4:p219:y2003 Practical Black Vine Weevil Management Richard S. Cowles Connecticut Agricultural Experiment Station Valley Laboratory P. O. Box 248 Windsor, CT 06095 Black vine weevil, Otiorhynchus sulcatus F, is the most obviously injurious insect pest of rhododendrons. Rhododendron enthusiasts are disheartened when purchasing precious species or hybrid plants, if they then find that the plant came with unwanted weevils "hitchhiking" in the roots. If the plant is small, feeding by black vine weevil larvae may cause sufficient root loss to kill the plant, or the larvae may girdle the main stem, with the same result. Larger plants can be affected in other ways. Root feeding can lead to nutrient deficiencies, because poorly functioning roots cannot translocate minerals available in the soil to the foliage. Finally, adult black weevils give plants a ragged appearance by notching the edges of leaves while feeding. This article is an update to my earlier review of black vine weevil biology (Cowles, 1995), and suggests practical approaches for managing this pest in nursery and landscape settings. Management in Container-grown Nurseries Control of black vine weevils in nurseries is especially important, both for protecting plants and to prevent transport of this pest. During the early development of rhododendron plants, there is insufficient root tissue on an individual plant to support the development of black vine weevil larvae, leading to plant girdling (Cowles, 1995). I have observed long-term effects of partial girdling and root loss on the growth performance of nursery plants, so any early effort to prevent this feeding can be expected to yield large benefits in terms of improved plant growth. -
Entomopathogenic Nematodes and Their Mutualistic Bacteria: Their Ecology and Application As Microbial Control Agents
Biopestic. Int.13(2):79-112 (2017) ISSN 0973-483X / e-ISSN 0976-9412 Entomopathogenic Nematodes and their Mutualistic Bacteria: Their Ecology and Application as Microbial Control Agents BARIS GULCU1, HARUN CIMEN2, RAMALINGAM KARTHIK RAJA3 AND SELCUK HAZIR2* 1Department of Biology, Faculty of Arts and Science, Duzce University, Duzce, 81620, Turkey 2Department of Biology, Faculty of Arts and Science, Adnan Menderes University, Aydin, 09010, Turkey 3Department of Biotechnology, Periyar University, Salem, Tamil Nadu, India KEY WORDS ABSTRACT Entomopathogenic nematodes (EPNs) belonging to the Biological control families heterorhabditidae (genus Heterorhabditis) and steinernematidae (genus Steinernema) are mutualistically associated with bacteria in the family Heterorhabditis Enterobacteriaceae (Photorhabdus spp. for Heterorhabditis and Xenorhabdus Photorhabdus spp. for Steinernema). At present, there are 100 Steinernema and 17 Steinernema Heterorhabditis species and 20 Xenorhabdus and 4 Photorhabdus species. In general, each EPN species has its own bacterial species, but a given bacterial Xenorhabdus species may be associated with more than one EPN species. The EPNs’ natural habitat is the soil where the nematode-bacterium complex infects many different insect species killing them within 48 h. EPNs have been isolated from many different islands and from all continents except antarctica. Because EPNs and their associated bacteria are safe to humans, other vertebrates, and plants, can effectively kill soil insect pests in a short time, serve as an alternative to chemical pesticides, are easily massed produced in vivo and in vitro, and do not require registration in many countries, a number of EPN species have been produced commercially to target soil and plant-boring pests in high value crops. -
(Stsm) Scientific Report
SHORT TERM SCIENTIFIC MISSION (STSM) SCIENTIFIC REPORT This report is submitted for approval by the STSM applicant to the STSM coordinator Action number: CA15219-45333 STSM title: Free-living marine nematodes from the eastern Mediterranean deep sea - connecting COI and 18S rRNA barcodes to structure and function STSM start and end date: 06/02/2020 to 18/3/2020 (short than the planned two months due to the Co-Vid 19 virus pandemic) Grantee name: Zoya Garbuzov PURPOSE OF THE STSM: My Ph.D. thesis is devoted to the population ecology of free-living nematodes inhabiting deep-sea soft substrates of the Mediterranean Levantine Basin. The success of the study largely depends on my ability to accurately identify collected nematodes at the species level, essential for appropriate environmental analysis. Morphological identification of nematodes at the species level is fraught with difficulties, mainly because of their relatively simple body shape and the absence of distinctive morphological characters. Therefore, a combination of morphological identification to genus level and the use of molecular markers to reach species identification is assumed to provide a better distinction of species in this difficult to identify group. My STSM host, Dr. Nikolaos Lampadariou, is an experienced taxonomist and nematode ecologist. In addition, I will have access to the molecular laboratory of Dr. Panagiotis Kasapidis. Both researchers are based at the Hellenic Center for Marine Research (HCMR) in Crete and this STSM is aimed at combining morphological taxonomy, under the supervision of Dr. Lampadariou, with my recently acquired experience in nematode molecular taxonomy for relating molecular identifiers to nematode morphology.