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1. TAKAKIACEAE S. Hattori & Inoue
1. TAKAKIACEAE S. Hattori & Inoue John R. Spence Wilfred B. Schofield Stems erect, arising sympodially from creeping pale or white stolons bearing clusters of beaked slime cells, rhizoids absent, stem in cross section differentiated into outer layer of smaller, thick- walled cells and cortex of larger thin-walled cells, sometimes with small central cells, these often with trigones, outer cells with simple oil droplets. Leaves typically 3-ranked, terete, forked, of (1–)2–4 terete segments, segments sometimes connate at base, in cross section of 3–5 cells, one or more larger central cells surrounded by smaller cells, oil droplets present in all cells, 2-celled slime hairs with enlarged apical cell present in axils of leaves. Specialized asexual reproduction by caducous leaves or stems. Sexual condition dioicous, gametangia naked. Seta with foot, persistent, elongating prior to capsule maturation. Capsule erect, symmetric, well-defined neck region absent, stomates absent, dextrorsely spiralled at maturity, columella ephemeral, basifixed, not penetrating the archesporial tissue, peristome absent, dehiscence by longitudinal helical slit. Calyptra fugacious to rarely persistent, typically mitrate. Spores 3-radiate, slightly roughened to papillose. Genus 1, species 2 (2 in the flora): North America, se Asia (including Borneo). Takakiaceae are plants of cool, cold-temperate to arctic-alpine oceanic climates. They were first collected in the Himalayas by J. D. Hooker and placed in the hepatic genus Lepidozia as L. ceratophylla by W. Mitten. The consensus has been that it was a highly unusual liverwort with affinity to the Calobryales. Distinctive features include erect shoots arising from a stolon, terete leaves, sometimes fused at or near the base and thus of 2–4 segments, naked lateral gametangia, slime cells, oil droplets, and chromosome numbers of n = 4 or 5. -
Early Evolution of the Land Plant Circadian Clock
Research Early evolution of the land plant circadian clock Anna-Malin Linde1,2*, D. Magnus Eklund1,2*, Akane Kubota3*, Eric R. A. Pederson1,2, Karl Holm1,2, Niclas Gyllenstrand1,2, Ryuichi Nishihama3, Nils Cronberg4, Tomoaki Muranaka5, Tokitaka Oyama5, Takayuki Kohchi3 and Ulf Lagercrantz1,2 1Department of Plant Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Norbyv€agen 18D, SE-75236 Uppsala, Sweden; 2The Linnean Centre for Plant Biology in Uppsala, Uppsala, Sweden; 3Graduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan; 4Department of Biology, Lund University, Ecology Building, SE-22362 Lund, Sweden; 5Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan Summary Author for correspondence: While angiosperm clocks can be described as an intricate network of interlocked transcrip- Ulf Lagercrantz tional feedback loops, clocks of green algae have been modelled as a loop of only two genes. Tel: +46(0)18 471 6418 To investigate the transition from a simple clock in algae to a complex one in angiosperms, we Email: [email protected] performed an inventory of circadian clock genes in bryophytes and charophytes. Additionally, Received: 14 December 2016 we performed functional characterization of putative core clock genes in the liverwort Accepted: 18 January 2017 Marchantia polymorpha and the hornwort Anthoceros agrestis. Phylogenetic construction was combined with studies of spatiotemporal expression patterns New Phytologist (2017) 216: 576–590 and analysis of M. polymorpha clock gene mutants. doi: 10.1111/nph.14487 Homologues to core clock genes identified in Arabidopsis were found not only in bryophytes but also in charophytes, albeit in fewer copies. Circadian rhythms were detected Key words: bryophyte, circadian clock, for most identified genes in M. -
Anthocerotophyta
Glime, J. M. 2017. Anthocerotophyta. Chapt. 2-8. In: Glime, J. M. Bryophyte Ecology. Volume 1. Physiological Ecology. Ebook 2-8-1 sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 5 June 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 2-8 ANTHOCEROTOPHYTA TABLE OF CONTENTS Anthocerotophyta ......................................................................................................................................... 2-8-2 Summary .................................................................................................................................................... 2-8-10 Acknowledgments ...................................................................................................................................... 2-8-10 Literature Cited .......................................................................................................................................... 2-8-10 2-8-2 Chapter 2-8: Anthocerotophyta CHAPTER 2-8 ANTHOCEROTOPHYTA Figure 1. Notothylas orbicularis thallus with involucres. Photo by Michael Lüth, with permission. Anthocerotophyta These plants, once placed among the bryophytes in the families. The second class is Leiosporocerotopsida, a Anthocerotae, now generally placed in the phylum class with one order, one family, and one genus. The genus Anthocerotophyta (hornworts, Figure 1), seem more Leiosporoceros differs from members of the class distantly related, and genetic evidence may even present -
Recq Helicases Function in Development, DNA Repair, and Gene Targeting in Physcomitrella Patens[OPEN]
The Plant Cell, Vol. 30: 717–736, March 2018, www.plantcell.org ã 2018 ASPB. RecQ Helicases Function in Development, DNA Repair, and Gene Targeting in Physcomitrella patensOPEN Gertrud Wiedemann,a Nico van Gessel,a Fabian Köchl,a Lisa Hunn,a Katrin Schulze,b Lina Maloukh,c Fabien Nogué,c Eva L. Decker,a Frank Hartung,b,1 and Ralf Reskia,d,1 a Plant Biotechnology, Faculty of Biology, University of Freiburg, 79104 Freiburg, Germany b Julius Kuehn Institute, Institute for Biosafety in Plant Biotechnology, 06484 Quedlinburg, Germany c Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, 78000 Versailles, France Downloaded from https://academic.oup.com/plcell/article/30/3/717/6099120 by guest on 28 September 2021 d BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg, Germany ORCID IDs: 0000-0002-0606-246X (N.v.G.); 0000-0003-0619-4638 (F.N.); 0000-0002-2356-6707 (F.H.); 0000-0002-5496-6711 (R.R.) RecQ DNA helicases are genome surveillance proteins found in all kingdoms of life. They are characterized best in humans, as mutations in RecQ genes lead to developmental abnormalities and diseases. To better understand RecQ functions in plants we concentrated on Arabidopsis thaliana and Physcomitrella patens, the model species predominantly used for studies on DNA repair and gene targeting. Phylogenetic analysis of the six P. patens RecQ genes revealed their orthologs in humans and plants. Because Arabidopsis and P. patens differ in their RecQ4 and RecQ6 genes, reporter and deletion moss mutants were generated and gene functions studied in reciprocal cross-species and cross-kingdom approaches. -
JUDD W.S. Et. Al. (2002) Plant Systematics: a Phylogenetic Approach. Chapter 7. an Overview of Green
UNCORRECTED PAGE PROOFS An Overview of Green Plant Phylogeny he word plant is commonly used to refer to any auto- trophic eukaryotic organism capable of converting light energy into chemical energy via the process of photosynthe- sis. More specifically, these organisms produce carbohydrates from carbon dioxide and water in the presence of chlorophyll inside of organelles called chloroplasts. Sometimes the term plant is extended to include autotrophic prokaryotic forms, especially the (eu)bacterial lineage known as the cyanobacteria (or blue- green algae). Many traditional botany textbooks even include the fungi, which differ dramatically in being heterotrophic eukaryotic organisms that enzymatically break down living or dead organic material and then absorb the simpler products. Fungi appear to be more closely related to animals, another lineage of heterotrophs characterized by eating other organisms and digesting them inter- nally. In this chapter we first briefly discuss the origin and evolution of several separately evolved plant lineages, both to acquaint you with these important branches of the tree of life and to help put the green plant lineage in broad phylogenetic perspective. We then focus attention on the evolution of green plants, emphasizing sev- eral critical transitions. Specifically, we concentrate on the origins of land plants (embryophytes), of vascular plants (tracheophytes), of 1 UNCORRECTED PAGE PROOFS 2 CHAPTER SEVEN seed plants (spermatophytes), and of flowering plants dons.” In some cases it is possible to abandon such (angiosperms). names entirely, but in others it is tempting to retain Although knowledge of fossil plants is critical to a them, either as common names for certain forms of orga- deep understanding of each of these shifts and some key nization (e.g., the “bryophytic” life cycle), or to refer to a fossils are mentioned, much of our discussion focuses on clade (e.g., applying “gymnosperms” to a hypothesized extant groups. -
Chapter 23: the Early Tracheophytes
Chapter 23 The Early Tracheophytes THE LYCOPHYTES Lycopodium Has a Homosporous Life Cycle Selaginella Has a Heterosporous Life Cycle Heterospory Allows for Greater Parental Investment Isoetes May Be the Only Living Member of the Lepidodendrid Group THE MONILOPHYTES Whisk Ferns Ophioglossalean Ferns Horsetails Marattialean Ferns True Ferns True Fern Sporophytes Typically Have Underground Stems Sexual Reproduction Usually Is Homosporous Fern Have a Variety of Alternative Means of Reproduction Ferns Have Ecological and Economic Importance SUMMARY PLANTS, PEOPLE, AND THE ENVIRONMENT: Sporophyte Prominence and Survival on Land PLANTS, PEOPLE, AND THE ENVIRONMENT: Coal, Smog, and Forest Decline THE OCCUPATION OF THE LAND PLANTS, PEOPLE, AND THE The First Tracheophytes Were ENVIRONMENT: Diversity Among the Ferns Rhyniophytes Tracheophytes Became Increasingly Better PLANTS, PEOPLE, AND THE Adapted to the Terrestrial Environment ENVIRONMENT: Fern Spores Relationships among Early Tracheophytes 1 KEY CONCEPTS 1. Tracheophytes, also called vascular plants, possess lignified water-conducting tissue (xylem). Approximately 14,000 species of tracheophytes reproduce by releasing spores and do not make seeds. These are sometimes called seedless vascular plants. Tracheophytes differ from bryophytes in possessing branched sporophytes that are dominant in the life cycle. These sporophytes are more tolerant of life on dry land than those of bryophytes because water movement is controlled by strongly lignified vascular tissue, stomata, and an extensive cuticle. The gametophytes, however still require a seasonally wet habitat, and water outside the plant is essential for the movement of sperm from antheridia to archegonia. 2. The rhyniophytes were the first tracheophytes. They consisted of dichotomously branching axes, lacking roots and leaves. They are all extinct. -
Topic 11: Land Plants, Part 1 (Bryophytes, Ferns & Fern Allies)
BIOL 221 – Concepts of Botany Spring 2008 Topic 11: Land Plants, part 1 (Bryophytes, Ferns & Fern Allies) A. Objectives for today’s lab . 1. Get to know 2 of the three groups of bryophytes (liverworts & mosses). 2. Get to know some of the Ferns and Fern Allies, which include some of the earliest lineages of vascular plants (represented today by Psilotum, Lycopodium, Equisetum, & Ferns—Boston (sword) fern, Staghorn fern) 3. Think about the morphological/anatomical innovations that are represented by each. Place these in the context of the origins of leaves, roots, and the fossil record and green plant phylogeny. 4. Know the general sequence of appearance: Green Algae ==> Bryophyte Lineages ==> Lycopod & Horsetail Lineages ==> Fern Lineages ==> Seed Plants (Gymnosperms & Angiosperms) B. Green Plant Phylogeny . Concepts of Botany, (page 1 of 12) C. NonVascular Free-Sporing Land Plants (Bryophytes) . C1. Liverworts . a. **LIVING MATERIAL**: Marchantia &/or Conacephalum (thallose liverworts). The conspicuous green plants are the gametophytes. With a dissecting scope, observe the polygonal outlines of the air chambers. On parts of the thallus are drier, it is easy to see the pore opening to the chamber. These are not stomata. They cannot open and close and the so the thallus can easily dry out if taking from water. Note the gemmae cups on some of that thalli. Ask your instructor what these are for. DRAW THEM TOO. b. **SLIDES**. Using the compound microscope, make observations of the vegetative and reproductive parts of various liverwort species. Note the structure of the air-chambers and the photosynthetic cells inside on the Marchantia sections! Concepts of Botany, (page 2 of 12) C2. -
Extant Diversity of Bryophytes Emerged from Successive Post-Mesozoic Diversification Bursts
ARTICLE Received 20 Mar 2014 | Accepted 3 Sep 2014 | Published 27 Oct 2014 DOI: 10.1038/ncomms6134 Extant diversity of bryophytes emerged from successive post-Mesozoic diversification bursts B. Laenen1,2, B. Shaw3, H. Schneider4, B. Goffinet5, E. Paradis6,A.De´samore´1,2, J. Heinrichs7, J.C. Villarreal7, S.R. Gradstein8, S.F. McDaniel9, D.G. Long10, L.L. Forrest10, M.L. Hollingsworth10, B. Crandall-Stotler11, E.C. Davis9, J. Engel12, M. Von Konrat12, E.D. Cooper13, J. Patin˜o1, C.J. Cox14, A. Vanderpoorten1,* & A.J. Shaw3,* Unraveling the macroevolutionary history of bryophytes, which arose soon after the origin of land plants but exhibit substantially lower species richness than the more recently derived angiosperms, has been challenged by the scarce fossil record. Here we demonstrate that overall estimates of net species diversification are approximately half those reported in ferns and B30% those described for angiosperms. Nevertheless, statistical rate analyses on time- calibrated large-scale phylogenies reveal that mosses and liverworts underwent bursts of diversification since the mid-Mesozoic. The diversification rates further increase in specific lineages towards the Cenozoic to reach, in the most recently derived lineages, values that are comparable to those reported in angiosperms. This suggests that low diversification rates do not fully account for current patterns of bryophyte species richness, and we hypothesize that, as in gymnosperms, the low extant bryophyte species richness also results from massive extinctions. 1 Department of Conservation Biology and Evolution, Institute of Botany, University of Lie`ge, Lie`ge 4000, Belgium. 2 Institut fu¨r Systematische Botanik, University of Zu¨rich, Zu¨rich 8008, Switzerland. -
A Polycomb Repressive Complex 2 Gene Regulates Apogamy and Gives Evolutionary Insights Into Early Land Plant Evolution
A polycomb repressive complex 2 gene regulates apogamy and gives evolutionary insights into early land plant evolution Yosuke Okanoa,1, Naoki Aonoa,1, Yuji Hiwatashia,b, Takashi Murataa,b, Tomoaki Nishiyamac,d, Takaaki Ishikawaa, Minoru Kuboc, and Mitsuyasu Hasebea,b,c,2 aNational Institute for Basic Biology, Okazaki 444-8585, Japan; bSchool of Life Science, The Graduate University for Advanced Studies, Okazaki 444-8585, Japan; cERATO, Japan Science and Technology Agency, Okazaki 444-8585, Japan; and dAdvanced Science Research Center, Kanazawa University, Kanazawa 920-0934, Japan Edited by Peter R. Crane, The University of Chicago, Chicago, IL, and approved July 27, 2009 (received for review June 22, 2009) Land plants have distinct developmental programs in haploid ogy, development, and evolution (5–7), the gene regulatory (gametophyte) and diploid (sporophyte) generations. Although network remains undeciphered. usually the two programs strictly alternate at fertilization and Parthenogenetic development of egg cells has been observed meiosis, one program can be induced during the other program. In in some alleles of loss-of-function mutants of the Arabidopsis a process called apogamy, cells of the gametophyte other than the thaliana genes FERTILIZATION-INDEPENDENT SEED 2 egg cell initiate sporophyte development. Here, we report for the (FIS2), MEDEA (MEA), and MULTICOPY SUPPRESSOR OF moss Physcomitrella patens that apogamy resulted from deletion IRA 1 (MSI1) (8, 9), which encode members of the polycomb of the gene orthologous to the Arabidopsis thaliana CURLY LEAF repressive complex 2 (PRC2) (8, 10, 11). The PRC2 complex was (PpCLF), which encodes a component of polycomb repressive first characterized in Drosophila melanogaster as a regulator of complex 2 (PRC2). -
Gametophore Buds
Glime, J. M. 2017. Ecophysiology of Development: Gametophore Buds. Chapt. 5-4. In: Glime, J. M. Bryophyte Ecology. Volume 1. 5-4-1 Physiological Ecology. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 17 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 5-4 ECOPHYSIOLOGY OF DEVELOPMENT: GAMETOPHORE BUDS TABLE OF CONTENTS Establishment Success ........................................................................................................................................ 5-4-2 Light and Photoperiod ......................................................................................................................................... 5-4-3 Growth Regulators .............................................................................................................................................. 5-4-4 Cytokinins .................................................................................................................................................... 5-4-4 Auxin-Cytokinin Interaction ........................................................................................................................ 5-4-6 Ethylene ....................................................................................................................................................... 5-4-8 Interactions with Other Organisms..................................................................................................................... -
Volume 1, Chapter 2-4: Bryophyta
Glime, J. M. 2017. Bryophyta - Takakiopsida. Chapt. 2-4. In: Glime, J. M. Bryophyte Ecology. Volume 1. Physiological Ecology. 2-4-1 Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 9 April 2021 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 2-4 BRYOPHYTA – TAKAKIOPSIDA TABLE OF CONTENTS Phylum Bryophyta .............................................................................................................................................. 2-4-2 Class Takakiopsida...................................................................................................................................... 2-4-2 Summary ........................................................................................................................................................... 2-4-10 Acknowledgments............................................................................................................................................. 2-4-10 Literature Cited ................................................................................................................................................. 2-4-10 2-4-2 Chapter 2-4: Bryophyta - Takakiopsida CHAPTER 2-4 BRYOPHYTA – TAKAKIOPSIDA Figure 1. Mt. Daisetsu from Kogan Spa, Hokkaido, Japan. The foggy peak of Mt. Daisetsu is the home of Takakia lepidozioides. Photo by Janice Glime. the Bryopsida, Andreaeopsida, and Sphagnopsida (Crum 1991). However, as more evidence from genetic and biochemical relationships -
Morphology Supports the Setaphyte Hypothesis: Mosses Plus Liverworts Form a Natural Group
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/329947849 Morphology supports the setaphyte hypothesis: mosses plus liverworts form a natural group Article · December 2018 DOI: 10.11646/bde.40.2.1 CITATION READS 1 713 3 authors: Karen S Renzaglia Juan Carlos Villarreal Southern Illinois University Carbondale Laval University 139 PUBLICATIONS 3,181 CITATIONS 64 PUBLICATIONS 1,894 CITATIONS SEE PROFILE SEE PROFILE David J. Garbary St. Francis Xavier University 227 PUBLICATIONS 3,461 CITATIONS SEE PROFILE Some of the authors of this publication are also working on these related projects: Ultrastructure and pectin composition of guard cell walls View project Integrating red macroalgae into land-based marine finfish aquaculture View project All content following this page was uploaded by Karen S Renzaglia on 27 December 2018. The user has requested enhancement of the downloaded file. Bry. Div. Evo. 40 (2): 011–017 ISSN 2381-9677 (print edition) DIVERSITY & http://www.mapress.com/j/bde BRYOPHYTEEVOLUTION Copyright © 2018 Magnolia Press Article ISSN 2381-9685 (online edition) https://doi.org/10.11646/bde.40.2.1 Morphology supports the setaphyte hypothesis: mosses plus liverworts form a natural group KAREN S. RENZAGLIA1, JUAN CARLOS VILLARREAL A.2,3 & DAVID J. GARBARY4 1 Department of Plant Biology, Southern Illinois University, Carbondale, Illinois, USA 2Département de Biologie, Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec, Canada 3 Smithsonian Tropical Research Institute, Panama, Panama 4 St. Francis Xavier University, Antigonish, Nova Scotia, Canada The origin and early diversification of land plants is one of the major unresolved problems in evolutionary biology.