Rickettsiales in Italy
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Anaplasma Species of Veterinary Importance in Japan
Veterinary World, EISSN: 2231-0916 REVIEW ARTICLE Available at www.veterinaryworld.org/Vol.9/November-2016/4.pdf Open Access Anaplasma species of veterinary importance in Japan Adrian Patalinghug Ybañez1 and Hisashi Inokuma2 1. Biology and Environmental Studies Program, Sciences Cluster, University of the Philippines Cebu, Lahug, Cebu City 6000, Philippines; 2. Department of Veterinary Clinical Science, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Inada Cho, Hokkaido 080-8555, Japan. Corresponding author: Adrian Patalinghug Ybañez, e-mail: [email protected], HI: [email protected] Received: 14-06-2016, Accepted: 28-09-2016, Published online: 04-11-2016 doi: 10.14202/vetworld.2016.1190-1196 How to cite this article: Ybañez AP, Inokuma H (2016) Anaplasma species of veterinary importance in Japan, Veterinary World, 9(11): 1190-1196. Abstract Anaplasma species of the family Anaplasmataceae, order Rickettsiales are tick-borne organisms that can cause disease in animals and humans. In Japan, all recognized species of Anaplasma (except for Anaplasma ovis) and a potentially novel Anaplasma sp. closely related to Anaplasma phagocytophilum have been reported. Most of these detected tick- borne pathogens are believed to be lowly pathogenic in animals in Japan although the zoonotic A. phagocytophilum has recently been reported to cause clinical signs in a dog and in humans. This review documents the studies and reports about Anaplasma spp. in Japan. Keywords: Anaplasma spp., Japan, tick-borne pathogen. Introduction A. phagocytophilum sequences [10-15]. Phylogenetic Anaplasma species are Gram-negative, obligate inferences have suggested that 2 clades exist within intracellular bacteria of the order Rickettsiales, fam- the genus Anaplasma: (1) Erythrocytic (A. -
Ehrlichiosis in Dogs Animal Veterinary Associations Borne Diseases
21 Working ECAVA F F A E V C A A C V Group on E A F F A E V C Canine A FECAVA Federation of European Companion vector Ehrlichiosis in dogs Animal Veterinary Associations borne diseases WERSJA POPRAWIONA A Ehrlichia spp. !! Ehrlichiosis is a tick-borne disease caused by Ehrlichia spp, an obligate intracellular gram-negative bacterium of the Anaplasmataceae family. In Europe, Ehrlichia canis causes canine monocytic ehrlichiosis ! (CME) The tick Rhipicephalus sanguineus is its main vector in Europe. Dogs and wild canids act as reservoirs. The disease has a subclinical, acute asymptomatic phase and chronic phase. The prognosis for chronically sick dogs is poor, ! !! The incubation period is 1-4 weeks. German Shepherds and Siberian Huskies appear to be more susceptible to clinical ehrlichiosis with more severe clinical !! presentations than other breeds. When to suspect infection? Origin / travelling history Clinical signs o Dogs that live in, originate from or have travelled to countries where the parasite is endemic are at risk. Weight loss, anorexia, lethargy, fever o Dogs in countries not currently considered endemic Bleeding disorders: petechiae/ecchymoses of the skin, mucous o o should not be considered free of risk. membranes and conjunctivas, hyphaema, epistaxis Lymphadenomegaly o How can it be confirmed? o Splenomegaly o Ocular signs: conjunctivitis, uveitis, corneal oedema Blood smear: Visualisation of intracellular bacteria on blood o Neurological signs (less common): seizures, ataxia, paresis, smears stained with Giemsa or similar. Sensitivity is poor: hyperaesthesia, cranial nerve deficits E. canis morulae in monocytes are visualised in only 4% (meningitis/meninigoencephalitis) cases of acute infections. -
Pinpointing the Origin of Mitochondria Zhang Wang Hanchuan, Hubei
Pinpointing the origin of mitochondria Zhang Wang Hanchuan, Hubei, China B.S., Wuhan University, 2009 A Dissertation presented to the Graduate Faculty of the University of Virginia in Candidacy for the Degree of Doctor of Philosophy Department of Biology University of Virginia August, 2014 ii Abstract The explosive growth of genomic data presents both opportunities and challenges for the study of evolutionary biology, ecology and diversity. Genome-scale phylogenetic analysis (known as phylogenomics) has demonstrated its power in resolving the evolutionary tree of life and deciphering various fascinating questions regarding the origin and evolution of earth’s contemporary organisms. One of the most fundamental events in the earth’s history of life regards the origin of mitochondria. Overwhelming evidence supports the endosymbiotic theory that mitochondria originated once from a free-living α-proteobacterium that was engulfed by its host probably 2 billion years ago. However, its exact position in the tree of life remains highly debated. In particular, systematic errors including sparse taxonomic sampling, high evolutionary rate and sequence composition bias have long plagued the mitochondrial phylogenetics. This dissertation employs an integrated phylogenomic approach toward pinpointing the origin of mitochondria. By strategically sequencing 18 phylogenetically novel α-proteobacterial genomes, using a set of “well-behaved” phylogenetic markers with lower evolutionary rates and less composition bias, and applying more realistic phylogenetic models that better account for the systematic errors, the presented phylogenomic study for the first time placed the mitochondria unequivocally within the Rickettsiales order of α- proteobacteria, as a sister clade to the Rickettsiaceae and Anaplasmataceae families, all subtended by the Holosporaceae family. -
Influence of Parasites on Fitness Parameters of the European Hedgehog (Erinaceus Europaeus)
Influence of parasites on fitness parameters of the European hedgehog (Erinaceus europaeus ) Zur Erlangung des akademischen Grades eines DOKTORS DER NATURWISSENSCHAFTEN (Dr. rer. nat.) Fakultät für Chemie und Biowissenschaften Karlsruher Institut für Technologie (KIT) – Universitätsbereich vorgelegte DISSERTATION von Miriam Pamina Pfäffle aus Heilbronn Dekan: Prof. Dr. Stefan Bräse Referent: Prof. Dr. Horst Taraschewski Korreferent: Prof. Dr. Agustin Estrada-Peña Tag der mündlichen Prüfung: 19.10.2010 For my mother and my sister – the strongest influences in my life “Nose-to-nose with a hedgehog, you get a chance to look into its eyes and glimpse a spark of truly wildlife.” (H UGH WARWICK , 2008) „Madame Michel besitzt die Eleganz des Igels: außen mit Stacheln gepanzert, eine echte Festung, aber ich ahne vage, dass sie innen auf genauso einfache Art raffiniert ist wie die Igel, diese kleinen Tiere, die nur scheinbar träge, entschieden ungesellig und schrecklich elegant sind.“ (M URIEL BARBERY , 2008) Index of contents Index of contents ABSTRACT 13 ZUSAMMENFASSUNG 15 I. INTRODUCTION 17 1. Parasitism 17 2. The European hedgehog ( Erinaceus europaeus LINNAEUS 1758) 19 2.1 Taxonomy and distribution 19 2.2 Ecology 22 2.3 Hedgehog populations 25 2.4 Parasites of the hedgehog 27 2.4.1 Ectoparasites 27 2.4.2 Endoparasites 32 3. Study aims 39 II. MATERIALS , ANIMALS AND METHODS 41 1. The experimental hedgehog population 41 1.1 Hedgehogs 41 1.2 Ticks 43 1.3 Blood sampling 43 1.4 Blood parameters 45 1.5 Regeneration 47 1.6 Climate parameters 47 2. Hedgehog dissections 48 2.1 Hedgehog samples 48 2.2 Biometrical data 48 2.3 Organs 49 2.4 Parasites 50 3. -
Genetic Diversity of Bartonella Species in Small Mammals in the Qaidam
www.nature.com/scientificreports OPEN Genetic diversity of Bartonella species in small mammals in the Qaidam Basin, western China Huaxiang Rao1, Shoujiang Li3, Liang Lu4, Rong Wang3, Xiuping Song4, Kai Sun5, Yan Shi3, Dongmei Li4* & Juan Yu2* Investigation of the prevalence and diversity of Bartonella infections in small mammals in the Qaidam Basin, western China, could provide a scientifc basis for the control and prevention of Bartonella infections in humans. Accordingly, in this study, small mammals were captured using snap traps in Wulan County and Ge’ermu City, Qaidam Basin, China. Spleen and brain tissues were collected and cultured to isolate Bartonella strains. The suspected positive colonies were detected with polymerase chain reaction amplifcation and sequencing of gltA, ftsZ, RNA polymerase beta subunit (rpoB) and ribC genes. Among 101 small mammals, 39 were positive for Bartonella, with the infection rate of 38.61%. The infection rate in diferent tissues (spleens and brains) (χ2 = 0.112, P = 0.738) and gender (χ2 = 1.927, P = 0.165) of small mammals did not have statistical diference, but that in diferent habitats had statistical diference (χ2 = 10.361, P = 0.016). Through genetic evolution analysis, 40 Bartonella strains were identifed (two diferent Bartonella species were detected in one small mammal), including B. grahamii (30), B. jaculi (3), B. krasnovii (3) and Candidatus B. gerbillinarum (4), which showed rodent-specifc characteristics. B. grahamii was the dominant epidemic strain (accounted for 75.0%). Furthermore, phylogenetic analysis showed that B. grahamii in the Qaidam Basin, might be close to the strains isolated from Japan and China. -
New Molecular High Throughput Methods for Ehrlichia Ruminantium Tick Screening and Characterization of Strain Genetic Structure in Mozambique and at Worldwide Scale
New molecular high throughput methods for Ehrlichia ruminantium tick screening and characterization of strain genetic structure in Mozambique and at worldwide scale Nídia Cangi Thesis presented on the 30th of January 2017 to obtain the grade of Doctor of Philosophy in Life Science, speciality in Molecular biology and Genetics, from the Université des Antilles Jury members: Reviewer: Prof. Christine MARITZ-OLIVIER Reviewer: Dr Eric DUCHAUD Examiner: Dr Nicola COLLINS Examiner: Prof. Jérôme GUERLOTTE Guest members: Thesis director: Prof. Olivier GROS Thesis co-director: Prof. Luís NEVES Thesis co-director: Dr Nathalie VACHIÉRY Acknowledgments I would like to express my gratitude to several people and institutions that contributed directly and indirectly to complete this thesis. I would like to thank sincerely my supervisors Dr Nathalie Vachiéry and Prof. Luís Neves for all their support and guidance, teaching, kindness and especially patience throughout the project. I would not be able to cross the many barriers on my way without their helping hands. I also would like to thank all members of CIRAD-Guadeloupe for receiving me, for their friendship, ideas and help in times of need, especially to Laure Bournez, Soledad Castano, Valerie Pinarello, Rosalie Aprelon, Christian Sheikboudou, Isabel Marcelino, Emmanuel Albina, as well as Adela Chavez, Jonathan Gordon and Mathilde Gondard. To CB-UEM for contributing to my academic development and to my supportive and friendly colleagues. To Prof. Olivier Gros and the University of Antilles for all the administrative support. To all my family and friends, especially my mother Balbina Müller and my husband Nilton Vaz that even without understanding the science behind my work always encouraged and loved me. -
Ehrlichiosis and Anaplasmosis Are Tick-Borne Diseases Caused by Obligate Anaplasmosis: Intracellular Bacteria in the Genera Ehrlichia and Anaplasma
Ehrlichiosis and Importance Ehrlichiosis and anaplasmosis are tick-borne diseases caused by obligate Anaplasmosis: intracellular bacteria in the genera Ehrlichia and Anaplasma. These organisms are widespread in nature; the reservoir hosts include numerous wild animals, as well as Zoonotic Species some domesticated species. For many years, Ehrlichia and Anaplasma species have been known to cause illness in pets and livestock. The consequences of exposure vary Canine Monocytic Ehrlichiosis, from asymptomatic infections to severe, potentially fatal illness. Some organisms Canine Hemorrhagic Fever, have also been recognized as human pathogens since the 1980s and 1990s. Tropical Canine Pancytopenia, Etiology Tracker Dog Disease, Ehrlichiosis and anaplasmosis are caused by members of the genera Ehrlichia Canine Tick Typhus, and Anaplasma, respectively. Both genera contain small, pleomorphic, Gram negative, Nairobi Bleeding Disorder, obligate intracellular organisms, and belong to the family Anaplasmataceae, order Canine Granulocytic Ehrlichiosis, Rickettsiales. They are classified as α-proteobacteria. A number of Ehrlichia and Canine Granulocytic Anaplasmosis, Anaplasma species affect animals. A limited number of these organisms have also Equine Granulocytic Ehrlichiosis, been identified in people. Equine Granulocytic Anaplasmosis, Recent changes in taxonomy can make the nomenclature of the Anaplasmataceae Tick-borne Fever, and their diseases somewhat confusing. At one time, ehrlichiosis was a group of Pasture Fever, diseases caused by organisms that mostly replicated in membrane-bound cytoplasmic Human Monocytic Ehrlichiosis, vacuoles of leukocytes, and belonged to the genus Ehrlichia, tribe Ehrlichieae and Human Granulocytic Anaplasmosis, family Rickettsiaceae. The names of the diseases were often based on the host Human Granulocytic Ehrlichiosis, species, together with type of leukocyte most often infected. -
Bartonella Henselae • Fleas and Black-Legged Ticks (Also Called Deer Ticks) of the Genus Ixodes May Serve As Vectors, but This Has Not Disease Agent: Been Proven
APPENDIX 2 Bartonella henselae • Fleas and black-legged ticks (also called deer ticks) of the genus Ixodes may serve as vectors, but this has not Disease Agent: been proven. • Bartonella henselae Blood Phase: Disease Agent Characteristics: • Agent found in endothelial cells and associated with RBCs in symptomatic cases • Gram-negative bacillus or coccobacillus, aerobic, • Occult bacteremia sometimes occurs in the absence nonmotile, nonspore-forming, facultatively intracel- of specific antibodies. lular bacterium • Order: Rhizobiales; Family: Bartonellaceae Survival/Persistence in Blood Products: • Size: 0.3-0.6 ¥ 0.3-1.0 mm • Nucleic acid: Approximately 1900 kb of DNA • A spiking study suggests that B. henselae added to RBCs can be recovered on solid media through 35 Disease Name: days of storage at 4°C. • Cat scratch disease • Cat scratch fever Transmission by Blood Transfusion: • Bacillary angiomatosis • Theoretical • Bacillary peliosis Cases/Frequency in Population: Priority Level: • 22,000 cases per year estimated in the US • Scientific/Epidemiologic evidence regarding blood • 2-6% in US blood donors safety: Theoretical • Cumulative seroprevalence of 7.1% to B. henselae and • Public perception and/or regulatory concern regard- B. quintana in US veterinary professionals ing blood safety: Absent • Public concern regarding disease agent: Very low Incubation Period: Background: • 3-10 days to appearance of papule at inoculation site; regional adenopathy may follow after a few weeks • In 1909,ALBartondescribed organisms that adhered to RBCs. Likelihood of Clinical Disease: • The name Bartonella bacilliformis was used for the • Relatively benign and self-limiting, lasting 6-12 weeks only member of the group identified before 1993. in the absence of antibiotic therapy • Several other species of Bartonella are known to infect humans, but at present, B. -
Ehrlichia Ewingii Sp. Nov., the Etiologic Agent of Canine Granulocytic Ehrlichiosis
INTERNATIONAL JOURNAL OF SYSTEMATICBACTERIOLOGY, Apr. 1992, p. 299-302 Vol. 42, No. 2 0020-7713/92/020299-04$02.00/0 Copyright 0 1992, International Union of Microbiological Societies NOTES Ehrlichia ewingii sp. nov., the Etiologic Agent of Canine Granulocytic Ehrlichiosis BURT E. ANDERSON,l* CRAIG E. GREENE,2 DANA C. JONES,l AND JACQUELINE E. DAWSON’ viral and Rickettsial Zoonoses Branch, Division of viral and Rickettsial Diseases, National Center for Infectious Diseases, Centers for Disease Control, Atlanta, Georgia 30333, and Department of Small Animal Medicine, College of Veterinaly Medicine, University of Georgia, Athens, Georgia 306022 The 16s rRNA gene was amplified, cloned, and sequenced from the blood of two dogs that were experimentally infected with the etiologic agent of canine granulocytic ehrlichiosis. The 16s rRNA sequence was found to be unique when it was compared with the sequences of other members of the genus Ehrlichia. The most closely related species were Ehrlichia canis (98.0% related) and the human ehrlichiosis agent (Ehrlichia chafeensis) (98.1% related); all other species in the genus were found to be phylogenetically much more distant. Our results, coupled with previous serologic data, provide conclusive evidence that the canine granulocytic ehrlichiosis agent is a new species of the genus Ehrlichia that is related to, but is distinct from, E. canis and all other members of the genus. We propose the name Ehrlichia ewingii sp. nov.; the Stillwater strain is the type strain. Ehrlichia canis, the type species of the genus Ehrlichia, human ehrlichiosis (Ehrlichia chafeensis) (1) is discussed was first described by Donatien and Lestoquard in 1935 (7). -
Anaplasma Platys Diagnosis in Dogs
Anaplasma platys Diagnosis in Dogs: Comparison Between Morphological and Molecular Tests Renata Fernandes Ferreira, VMD, MSc1 Aloysio de Mello Figueiredo Cerqueira, VMD, MSc, DSc2 Ananda Müller Pereira, VMD1 Cecília Matheus Guimarães BSc2 Alexandre Garcia de Sá, VMD, MSc1 Fabricio da Silva Abreu, VMD, MSc1 Carlos Luiz Massard, VMD, MSc, PhD3 Nádia Regina Pereira Almosny, VMD, MSc, PhD1 1Departamento de Patologia e Clínica Veterinária Universidade Federal Fluminense Niterói, Rio de Janeiro, Brazil 2Departamento de Microbiologia e Parasitologia Universidade Federal Fluminense Niterói, Rio de Janeiro, Brazil 3Departamento de Parasitologia Animal Universidade Federal Rural do Rio de Janeiro Seropédica, Rio de Janeiro, Brazil KEY WORDS: Anaplasma platys, PCR, ickettsia helminthoeca (PCR1). The second inclusions stage consisted of the utilization of specific primers for the detection of the species A ABSTRACT platys (PCR2). Upon comparison of the re- Anaplasma platys is related to the appear- sults, 18.81% of the studied animals showed ance of inclusion bodies in blood platelets; positive for PCR1. For PCR2, 15.84% of the however, this may be a nonspecific occur- studied animals had a positive result. In the rence as there are nonparasitic inclusion morphological analysis of the inclusion bod- bodies within these figured elements. Aiming ies, 14.85% of the animals showed positive to validate the morphological diagnosis for for A platys. The other inclusion bodies were A platys, 101 dogs were selected due to the considered as nonspecific, therefore nega- appearance of inclusion bodies, indepen- tive. When compared to the morphological dently from suggestive parasites, which analysis, the results of the molecule analysis were submitted to polymerase chain reac- by means of the MacNemar test led to the tion (PCR) carried out in 2 stages. -
First Detection of Tick-Borne Encephalitis Virus in Ixodes Ricinus
Ticks and Tick-borne Diseases 10 (2019) 101265 Contents lists available at ScienceDirect Ticks and Tick-borne Diseases journal homepage: www.elsevier.com/locate/ttbdis Original article First detection of tick-borne encephalitis virus in Ixodes ricinus ticks and T their rodent hosts in Moscow, Russia ⁎ Marat Makenova, , Lyudmila Karana, Natalia Shashinab, Marina Akhmetshinab, Olga Zhurenkovaa, Ivan Kholodilovc, Galina Karganovac,d, Nina Smirnovaa,e, Yana Grigorevaa, Yanina Yankovskayaf, Marina Fyodorovaa a Central Research Institute of Epidemiology, Novogireevskaya st 3-A, 415, Moscow, 111123, Russia b Sсiеntifiс Rеsеarсh Disinfесtology Institutе, Nauchniy proezd st. 18, Moscow, 117246, Russia c Chumakov Institute of Poliomyelitis and Viral Encephalitides (FSBSI “Chumakov FSC R&D IBP RAS), prem. 8, k.17, pos. Institut Poliomyelita, poselenie Moskovskiy, Moscow, 108819, Russia d Institute for Translational Medicine and Biotechnology, Sechenov University, Bolshaya Pirogovskaya st, 2, page 4, room 106, Moscow, 119991, Russia e Lomonosov Moscow State University, Leninskie Gory st. 1-12, MSU, Faculty of Biology, Moscow, 119991, Russia f Pirogov Russian National Research Medical University, Ostrovityanova st. 1, Moscow, 117997, Russia ARTICLE INFO ABSTRACT Keywords: Here, we report the first confirmed autochthonous tick-borne encephalitis case diagnosed in Moscow in2016 Tick-borne encephalitis virus and describe the detection of tick-borne encephalitis virus (TBEV) in ticks and small mammals in a Moscow park. Ixodes ricinus The paper includes data from two patients who were bitten by TBEV-infected ticks in Moscow city; one of Borrelia burgdorferi sensu lato these cases led to the development of the meningeal form of TBE. Both TBEV-infected ticks attacked patients in Vector-borne diseases the same area.