A New Species of Attheyella (Canthosella) from Colombia And
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Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
Volume 2, Chapter 10-1: Arthropods: Crustacea
Glime, J. M. 2017. Arthropods: Crustacea – Copepoda and Cladocera. Chapt. 10-1. In: Glime, J. M. Bryophyte Ecology. Volume 2. 10-1-1 Bryological Interaction. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 19 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology2/>. CHAPTER 10-1 ARTHROPODS: CRUSTACEA – COPEPODA AND CLADOCERA TABLE OF CONTENTS SUBPHYLUM CRUSTACEA ......................................................................................................................... 10-1-2 Reproduction .............................................................................................................................................. 10-1-3 Dispersal .................................................................................................................................................... 10-1-3 Habitat Fragmentation ................................................................................................................................ 10-1-3 Habitat Importance ..................................................................................................................................... 10-1-3 Terrestrial ............................................................................................................................................ 10-1-3 Peatlands ............................................................................................................................................. 10-1-4 Springs ............................................................................................................................................... -
BIOTA COLOMBIANA ISSN Impreso 0124-5376 Volumen 20 · Número 1 · Enero-Junio De 2019 ISSN Digital 2539-200X DOI 10.21068/C001
BIOTA COLOMBIANA ISSN impreso 0124-5376 Volumen 20 · Número 1 · Enero-junio de 2019 ISSN digital 2539-200X DOI 10.21068/c001 Atropellamiento vial de fauna silvestre en la Troncal del Caribe Amaryllidaceae en Colombia Adiciones al inventario de copépodos de Colombia Nuevos registros de avispas en la región del Orinoco Herpetofauna de San José del Guaviare Escarabajos estercoleros en Aves en los páramos de Antioquia Oglán Alto, Ecuador y el complejo de Chingaza Biota Colombiana es una revista científica, periódica-semestral, Comité Directivo / Steering Committee que publica artículos originales y ensayos sobre la biodiversi- Brigitte L. G. Baptiste Instituto de Investigación de Recursos Biológicos dad de la región neotropical, con énfasis en Colombia y países Alexander von Humboldt vecinos, arbitrados mínimo por dos evaluadores externos. In- M. Gonzalo Andrade Instituto de Ciencias Naturales, Universidad Nacional de Colombia cluye temas relativos a botánica, zoología, ecología, biología, Francisco A. Arias Isaza Instituto de Investigaciones Marinas y Costeras limnología, conservación, manejo de recursos y uso de la bio- “José Benito Vives De Andréis” - Invemar diversidad. El envío de un manuscrito implica la declaración Charlotte Taylor Missouri Botanical Garden explícita por parte del (los) autor (es) de que este no ha sido previamente publicado, ni aceptado para su publicación en otra Editor / Editor revista u otro órgano de difusión científica. El proceso de arbi- Rodrigo Bernal Independiente traje tiene una duración mínima de tres a cuatro meses a partir Editor de artículos de datos / Data papers Editor de la recepción del artículo por parte de Biota Colombiana. To- Dairo Escobar Instituto de Investigación de Recursos Biológicos das las contribuciones son de la entera responsabilidad de sus Alexander von Humboldt autores y no del Instituto de Investigación de Recursos Bioló- Asistente editorial / Editorial assistant gicos Alexander von Humboldt, ni de la revista o sus editores. -
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources http://www.dnr.sc.gov/marine/sertc/ Southeastern Regional Taxonomic Center Invertebrate Literature Library (updated 9 May 2012, 4056 entries) (1958-1959). Proceedings of the salt marsh conference held at the Marine Institute of the University of Georgia, Apollo Island, Georgia March 25-28, 1958. Salt Marsh Conference, The Marine Institute, University of Georgia, Sapelo Island, Georgia, Marine Institute of the University of Georgia. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Caprellidea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Gammaridea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1981). Stomatopods. FAO species identification sheets for fishery purposes. Eastern Central Atlantic; fishing areas 34,47 (in part).Canada Funds-in Trust. Ottawa, Department of Fisheries and Oceans Canada, by arrangement with the Food and Agriculture Organization of the United Nations, vols. 1-7. W. Fischer, G. Bianchi and W. B. Scott. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume II. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume III. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. -
Mammoth Cave: a Hotspot of Subterranean Biodiversity in the United States
diversity Article Mammoth Cave: A Hotspot of Subterranean Biodiversity in the United States Matthew L. Niemiller 1,*, Kurt Helf 2 and Rickard S. Toomey 3 1 Department of Biological Sciences, The University of Alabama in Huntsville, 301 Sparkman Dr NW, Huntsville, AL 35899, USA 2 Cumberland Piedmont Network, National Park Service, Mammoth Cave National Park, 61 Maintenance Rd., Mammoth Cave, KY 42259, USA; [email protected] 3 Division of Science and Resources Management, Mammoth Cave National Park, P.O. Box 7, Mammoth Cave, KY 42259, USA; [email protected] * Correspondence: [email protected] or [email protected] Abstract: The Mammoth Cave System in the Interior Low Plateau karst region in central Kentucky, USA is a global hotspot of cave-limited biodiversity, particularly terrestrial species. We searched the literature, museum accessions, and database records to compile an updated list of troglobiotic and stygobiotic species for the Mammoth Cave System and compare our list with previously published checklists. Our list of cave-limited fauna totals 49 species, with 32 troglobionts and 17 stygobionts. Seven species are endemic to the Mammoth Cave System and other small caves in Mammoth Cave National Park. The Mammoth Cave System is the type locality for 33 cave-limited species. The exceptional diversity at Mammoth Cave is likely related to several factors, such as the high dispersal potential of cave fauna associated with expansive karst exposures, high surface productivity, and a long history of exploration and study. Nearly 80% of the cave-limited fauna is of conservation concern, many of which are at an elevated risk of extinction because of small ranges, few occurrences, Citation: Niemiller, M.L.; Helf, K.; and several potential threats. -
Epikarst Crustaceans from Some Italian Caves: Endemisms and Spatial Scales
Biogeographia – The Journal of Integrative Biogeography 33 (2018): 1-18 Epikarst crustaceans from some Italian caves: endemisms and spatial scales MARIA CRISTINA BRUNO1,*, VEZIO COTTARELLI2, ROSARIO GRASSO3, LEONARDO LATELLA4, SILVIA ZAUPA5, MARIA TERESA SPENA3 1 Edmund Mach Foundation, Research and Innovation Centre, S. Michele all’Adige (TN), Italy 2 Department for Innovation in Biological, Agro-food and Forest systems, Tuscia University, Viterbo, Italy 3 Department of Biological, Geological and Environmental Sciences, Catania University, Catania, Italy 4 Department of Zoology, Museo Civico di Storia Naturale, Verona, Italy 5 Department of Earth and Environmental Sciences, Bicocca University, Milan, Italy * e-mail corresponding author: [email protected] Keywords: Copepoda, epikarst drip, Italy, Sicily, Venetia. SUMMARY The epikarst crustacean fauna from four Sicilian caves (Conza, Entella, Molara, and Zubbia del Cavallo caves) and four caves in the Lessinian Massif in the Venetian Prealps (Covolo della Croce, Ponte di Veja, Roverè Mille, Buso della Rana caves) was recently investigated. The two groups of caves differ in their environmental conditions: the Sicilian caves are fossil except one which has an active branch; they are all fed by strongly intermittent and scarce rainfall peaking in the fall. The Lessinian caves are fed by more abundant rainfall, with two yearly peaks (May-June and October-November); two of them are active, one has a temporary stream, one is fossil. The crustacean fauna found in the epikarst drip of each of the studied caves is characterized by interesting endemic harpacticoid and cyclopoid copepods, and one bathynellacean syncarid, often collected in only one cave. Higher diversity of stygobiotic taxa was recorded for the Lessinian caves (9 species of copepods in the Lessinian, and 6 species of copepods and one bathynellacean in Sicily); most of the taxa collected in Sicily are endemic to one cave. -
First Record of Harpacticoid Copepods from Lake Tahoe, United States
A peer-reviewed open-access journal ZooKeys 479: 1–24 (2015)First record of harpacticoid copepods from Lake Tahoe, United States... 1 doi: 10.3897/zookeys.479.8673 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research First record of harpacticoid copepods from Lake Tahoe, United States: two new species of Attheyella (Harpacticoida, Canthocamptidae) Hyun Woo Bang1, Jeffrey G. Baguley1, Heejin Moon1 1 Department of Biology, University of Nevada Reno, Reno, Nevada 89557, USA Corresponding author: Jeffrey G. Baguley ([email protected]) Academic editor: D. Defaye | Received 30 September 2014 | Accepted 10 January 2015 | Published 29 January 2015 http://zoobank.org/665FAF39-54BC-450E-AA13-C315EA018B3E Citation: Bang HW, Baguley JG, Moon H (2015) First record of harpacticoid copepods from Lake Tahoe, United States: two new species of Attheyella (Harpacticoida, Canthocamptidae). ZooKeys 479: 1–24. doi: 10.3897/zookeys.479.8673 Abstract Benthic harpacticoids were collected for the first time at Lake Tahoe, California-Nevada, United States. Two species were identified as members of the genusAttheyella Brady, 1880. The genus Attheyella com- prises about 150 species within six subgenera, but only twelve species have previously been reported from North American freshwater habitats. The two new species of Attheyella described here have a 3-segmented endopod on P1 and 2-segmented P2–P4 endopods, the distal segment of exopod of P2–P4 has three outer spines, and the P5 has five setae on the exopod and six setae on the baseoendopod.Attheyella (Attheyella) tahoensis sp. n. most closely resembles A. (A.) idahoensis (Marsh, 1903) from Idaho, Montana, and Alaska (United States) and A. -
The Response of Epigean and Obligate Groundwater Copepods (Crustacea: Copepoda)
water Article Linking Hydrogeology and Ecology in Karst Landscapes: The Response of Epigean and Obligate Groundwater Copepods (Crustacea: Copepoda) Mattia Di Cicco 1, Tiziana Di Lorenzo 2,3 , Mattia Iannella 1 , Ilaria Vaccarelli 1, Diana Maria Paola Galassi 1 and Barbara Fiasca 1,* 1 Department of Life, Health & Environmental Sciences, University of L’Aquila, 67100 L’Aquila, Italy; [email protected] (M.D.C.); [email protected] (M.I.); [email protected] (I.V.); [email protected] (D.M.P.G.) 2 Istituto di Ricerca sugli Ecosistemi Terrestri—IRET CNR, 50019 Sesto Fiorentino, Italy; [email protected] 3 “Emil Racovita” Institute of Speleology Romanian Academy, Clinicilor 5, 400006 Cluj Napoca, Romania * Correspondence: barbara.fi[email protected] Abstract: Groundwater invertebrate communities in karst landscapes are known to vary in response to multiple environmental factors. This study aims to explore the invertebrate assemblages’ compo- sition of an Apennine karst system in Italy mainly described by the Rio Gamberale surface stream and the Stiffe Cave. The stream sinks into the carbonate rock and predominantly feeds the saturated karst into the cave. For a minor portion, groundwater flows from the epikarst and the perched aquifer within it. The spatial distribution of the species belonging to the selected target group of Citation: Di Cicco, M.; Di Lorenzo, the Crustacea Copepoda between the surface stream and the groundwater habitats inside the cave T.; Iannella, M.; Vaccarelli, I.; Galassi, highlighted a different response of surface-water species and obligate groundwater dwellers to the D.M.P.; Fiasca, B. Linking hydrogeological traits of the karst unit. -
Continental Copepods (Crustacea: Hexanauplia) of Colombia: Revision and Additions to the Inventory
DOI: 10.21068/c2019.v20n01a04 Gaviria & Aranguren-Riaño Continental copepods (Crustacea: Hexanauplia) of Colombia: revision and additions to the inventory Copépodos (Crustacea: Hexanauplia) continentales de Colombia: revisión y adiciones al inventario Santiago Gaviria and Nelson Aranguren-Riaño Abstract We present the compilation of published and unpublished records of continental copepods of Colombia, as well as personal observations by the authors, yielding an additional list of 52 species and subspecies (7 calanoids, 20 cyclopoids, 25 harpacticoids). In addition to our former inventory (2007) of 69 species, the total number now reaches 121 taxa, increasing by 75 % the known number of continental copepods. Freshwater taxa increased in 15 species and subspecies. The number of brackish species (and marine species collected in brackish environments), recorded from coastal lagoons and temporal offshore ponds reached 39 species and subspecies. Thirteen taxa with locus typicus in Colombia have been described since 2007. Between 2007 and 2018, thirty-nine departmental records were made, and 43 new habitat records were reported (not including the species recorded as new for the country). Parasitic copepods of fish reached six species. However, the number of species is expected to increase with the survey of poorly studied regions like the Amazon and the Eastern Plains, and habitats like groundwater, benthos of lakes and ponds, semiterrestrial environments and additional coastal lagoons. Keywords. Biodiversity. Geographic distribution. Meiobenthos. Neotropical region. Zooplankton. Resumen Como resultado de la compilación de datos publicados y no publicados de copépodos continentales de Colombia, así como de observaciones personales de los autores, se estableció una lista adicional de 52 especies y subespecies (7 calanoideos, 20 cyclopoideos, 25 harpacticoideos). -
District of Columbia Wildlife Action Plan
District of Columbia Wildlife Action Plan 2015 UPDATE District Department of the Environment July 2015 Acknowledgements Coordinator and Lead Author Damien Ossi, DDOE–Fisheries and Wildlife Lead Authors Dan Rauch, DDOE–Fisheries and Wildlife Lindsay Rohrbaugh, DDOE–Fisheries and Wildlife Shellie Spencer, DDOE–Fisheries and Wildlife Climate Change Vulnerability Assessments Jennifer L. Murrow, University of Maryland, Department of Environmental Science and Technology Editor Sherry Schwechten, DDOE–Natural Resources Updating the District of Columbia’s State Wildlife Action Plan required guidance, technical analysis, review, and editing from technical committees, internal groups, and sister agencies. Members of the DDOE review team were Jonathan Champion, Julia Robey Christian, Adriana Hochberg, Kate Johnson, Hamid Karimi, Bryan King, Karim Marshall, Daniel Ryan, Steve Saari, Mary Searing, and Matt Weber. Individuals from local, regional, and federal agencies; academia; and conservation organizations provided invaluable input concerning species, ecosystems, habitats, threats, conservation challenges, and solutions for the District. iii Preface The District of Columbia is a rapidly growing city, known in part for its beautiful parks and green spaces. With large sites like Rock Creek Park, Fort DuPont Park, the National Arboretum, and the Chesapeake and Ohio Canal Historical Park, and smaller places like Pope Branch, Alger, Linnean, and Hillcrest Parks, the District has the second highest amount of green space per capita of any city in the country. These spaces provide great value to the District’s residents and visitors, but they also act as homes or refuges for somewhat less apparent residents. Bald eagles nest overlooking the Anacostia River. American shad and rockfish swim thousands of miles to spawn in the Potomac River. -
Conservation Advice
Environment Protection and Biodiversity Conservation Act 1999 (EPBC Act) (s266B) Approved Conservation Advice (including Listing Advice) for the Assemblages of species associated with open-coast salt-wedge estuaries of western and central Victoria ecological community 1. The Threatened Species Scientific Committee (the Committee) was established under the EPBC Act and has obligations to present advice to the Minister for the Environment (the Minister) in relation to the listing and conservation of threatened ecological communities, including under sections 189, 194N, 266B 269AA of the EPBC Act. 2. The Committee provided its advice on Assemblages of species associated with open-coast salt-wedge estuaries of western and central Victoria ecological community to the Minister as a draft of this Conservation Advice in 2018. The Committee recommended that: • the ecological community merits listing as Endangered under the EPBC Act; and • a recovery plan is not required for the ecological community at this time. 3. In 2018, the Minister accepted the Committee’s advice, adopting this document as the approved Conservation Advice. The Minister amended the list of threatened ecological communities under section 184 of the EPBC Act to include Assemblages of species associated with open-coast salt-wedge estuaries of western and central Victoria ecological community in the Endangered category. 4. A draft Conservation Advice for this ecological community was made available for expert and public comment for a minimum of 30 business days. The Committee and Minister had regard to all public and expert comment that was relevant to the consideration of the ecological community. 5. This approved Conservation Advice has been developed based on the best available information at the time it was approved; this includes scientific literature, advice from consultations, and existing plans, records or management prescriptions for this ecological community. -
Copepod Crustaceans from Burrows of Parastacus Defossus Faxon, 1898 in Southern Brazil
Nauplius 14(1): 23-30, 2006 23 Copepod crustaceans from burrows of Parastacus defossus Faxon, 1898 in southern Brazil Janet W. Reid; Clarissa K. Noro; Ludwig Buckup and Juliana Bisol (JWR) Research Associate, Virginia Museum of Natural History, Martinsville, Virginia 24112 U.S.A. Correspondence address: 1100 Cherokee Court, Martinsville, Virginia 24112 U.S.A. E-mail: [email protected] (CKN, LB, JB) Departamento de Zoologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, Brazil. Abstract We report the results of a survey of copepods in burrows of Parastacus defossus, near Lami, Porto Alegre, Rio Grande do Sul, Brazil, conducted during the rainy seasons of 2003 and 2004. Copepods were also collected from surface water in nearby ephemeral pools. Twelve species of copepods (6 cyclopoids and 6 harpacticoids) were found either consistently or occasionally in the burrows (several of these also in the surface pools); 3 additional species appeared only in surface waters. None of the species found in the burrows has previously been reported from this subhabitat. In this region, a distinctive crayfish-burrow fauna (pholeteros), defined herein as species that occurred more often in the burrows than in surface water and were present in the burrows during 3 or more sampling months in both years, consists of Diacyclops uruguayensis, Mesocyclops annulatus, and Attheyella fuhrmanni. Paracyclops chiltoni and Elaphoidella bidens appeared equally often in both burrows and surface waters. Microcyclops anceps and Tropocyclops prasinus meridionalis were frequent in surface waters but much less often in burrows; whereas Acanthocyclops smithae, Metacyclops cf. denticulatus, and Microcyclops ceibaensis were found only in surface waters.