Constraint and Diversification of Developmental Trajectories in Cichlid Facial Morphologies Powder Et Al
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CICHLIFORMES: Cichlidae (part 5) · 1 The ETYFish Project © Christopher Scharpf and Kenneth J. Lazara COMMENTS: v. 10.0 - 11 May 2021 Order CICHLIFORMES (part 5 of 8) Family CICHLIDAE Cichlids (part 5 of 7) Subfamily Pseudocrenilabrinae African Cichlids (Palaeoplex through Yssichromis) Palaeoplex Schedel, Kupriyanov, Katongo & Schliewen 2020 palaeoplex, a key concept in geoecodynamics representing the total genomic variation of a given species in a given landscape, the analysis of which theoretically allows for the reconstruction of that species’ history; since the distribution of P. palimpsest is tied to an ancient landscape (upper Congo River drainage, Zambia), the name refers to its potential to elucidate the complex landscape evolution of that region via its palaeoplex Palaeoplex palimpsest Schedel, Kupriyanov, Katongo & Schliewen 2020 named for how its palaeoplex (see genus) is like a palimpsest (a parchment manuscript page, common in medieval times that has been overwritten after layers of old handwritten letters had been scraped off, in which the old letters are often still visible), revealing how changes in its landscape and/or ecological conditions affected gene flow and left genetic signatures by overwriting the genome several times, whereas remnants of more ancient genomic signatures still persist in the background; this has led to contrasting hypotheses regarding this cichlid’s phylogenetic position Pallidochromis Turner 1994 pallidus, pale, referring to pale coloration of all specimens observed at the time; chromis, a name -
Genetic and Developmental Origins of a Unique Foraging Adaptation in a Lake Malawi Cichlid Genus
Genetic and developmental origins of a unique foraging adaptation in a Lake Malawi cichlid genus Moira R. Conitha, Yinan Hub,c, Andrew J. Conithd, Maura A. Maginnisd, Jacqueline F. Webbb, and R. Craig Albertsond,1 aGraduate Program in Organismic and Evolutionary Biology, University of Massachusetts, Amherst, MA 01003; bDepartment of Biological Sciences, University of Rhode Island, Kingston, RI 02881; cBiology Department, Boston College, Chestnut Hill, MA 02467; and dDepartment of Biology, University of Massachusetts, Amherst, MA 01003 Edited by Hopi E. Hoekstra, HHMI and Harvard University, Cambridge, MA, and approved May 29, 2018 (received for review November 13, 2017) Phenotypic novelties are an important but poorly understood from model organisms, which are selected in part because of their category of morphological diversity. They can provide insights into conserved phenotypes (16, 17). Additionally, novel phenotypes of- the origins of phenotypic variation, but we know relatively little ten have ancient origins and/or occur in lineages that are not about their genetic origins. Cichlid fishes display remarkable diversity amenable to laboratory investigations. Here, we address the origin in craniofacial anatomy, including several novelties. One aspect of this of a novel phenotype by identifying the genetic mechanisms un- variation is a conspicuous, exaggerated snout that has evolved in derlying tissue-level changes of a unique craniofacial morphology in a single Malawi cichlid lineage and is associated with foraging a genus of cichlid from Lake Malawi, Africa. Cichlids are an iconic model system for the study of rapid and specialization and increased ecological success. We examined the – developmental and genetic origins for this phenotype and found that extensive craniofacial diversification (18 20). -
Revised Diagnosis of Metriaclima with Description of a New Species (Teleostei: Cichlidae) from Lake Malawi National Park, Africa
233 Ichthyol. Explor. Freshwaters, Vol. 17, No. 3, pp. 233-246, 11 fi gs., 2 tabs., September 2006 © 2006 by Verlag Dr. Friedrich Pfeil, München, Germany – ISSN 0936-9902 Revised diagnosis of Metriaclima with description of a new species (Teleostei: Cichlidae) from Lake Malawi National Park, Africa Adrianus F. Konings* and Jay R. Stauffer, Jr.** The diagnosis of Metriaclima is expanded to include several feeding behavioral characteristics. Species of Metria- clima feed at almost perpendicular angles to the substrate and are able to align the teeth of both upper and lower jaws in the same plane by abducting the jaws to a 180°-angle opening. While closing the mouth, the teeth comb through the algae anchored to the substrate and collect loose material. The bites to the substrate follow in rapid succession. We have further expanded the diagnosis of Metriaclima zebra to include a population without distinct vertical bars. Finally, we describe a new species, M. flavifemina, which inhabits the rock-sand interface in the southern part of the lake. Introduction a moderately-sloped ethmo-vomerine block with a swollen rostral tip. Morphological characteristics The small, rock-dwelling haplochromine cichlid of the feeding apparatus reflect the manner in fishes in Lake Malawi, Africa, are commonly which these fishes browse from the substrate and referred to as mbuna. The genus Pseudotropheus one of the purposes of this paper is to include – one of the dozen genera currently recognized characters of feeding behavior in the diagnosis of within the mbuna – originally included a widely Metriaclima. diverse group of cichlids and served as a catch-all When Stauffer et al. -
Bayesian Node Dating Based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes
Supporting Information Bayesian Node Dating based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes Michael Matschiner,1,2y Zuzana Musilov´a,2,3 Julia M. I. Barth,1 Zuzana Starostov´a,3 Walter Salzburger,1,2 Mike Steel,4 and Remco Bouckaert5,6y Addresses: 1Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, Oslo, Norway 2Zoological Institute, University of Basel, Basel, Switzerland 3Department of Zoology, Faculty of Science, Charles University in Prague, Prague, Czech Republic 4Department of Mathematics and Statistics, University of Canterbury, Christchurch, New Zealand 5Department of Computer Science, University of Auckland, Auckland, New Zealand 6Computational Evolution Group, University of Auckland, Auckland, New Zealand yCorresponding author: E-mail: [email protected], [email protected] 1 Supplementary Text 1 1 Supplementary Text Supplementary Text S1: Sequencing protocols. Mitochondrial genomes of 26 cichlid species were amplified by long-range PCR followed by the 454 pyrosequencing on a GS Roche Junior platform. The primers for long-range PCR were designed specifically in the mitogenomic regions with low interspecific variability. The whole mitogenome of most species was amplified as three fragments using the following primer sets: for the region between position 2 500 bp and 7 300 bp (of mitogenome starting with tRNA-Phe), we used forward primers ZM2500F (5'-ACG ACC TCG ATG TTG GAT CAG GAC ATC C-3'), L2508KAW (Kawaguchi et al. 2001) or S-LA-16SF (Miya & Nishida 2000) and reverse primer ZM7350R (5'-TTA AGG CGT GGT CGT GGA AGT GAA GAA G-3'). The region between 7 300 bp and 12 300 bp was amplified using primers ZM7300F (5'-GCA CAT CCC TCC CAA CTA GGW TTT CAA GAT GC-3') and ZM12300R (5'-TTG CAC CAA GAG TTT TTG GTT CCT AAG ACC-3'). -
Microhabitat Predicts Species Differences in Exploratory Behavior in Lake Malawi 2 Cichlids 3 4 Zachary V
bioRxiv preprint doi: https://doi.org/10.1101/525378; this version posted January 22, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Title: Microhabitat predicts species differences in exploratory behavior in Lake Malawi 2 cichlids 3 4 Zachary V. Johnson†1, Emily C. Moore†2,3, Ryan Y. Wong4, John R. Godwin2, Jeffrey T. 5 Streelman1, Reade B. Roberts2 6 7 1School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA 8 2 Department of Biological Sciences and W. M. Keck Center for Behavioral Biology, North 9 Carolina State University, Raleigh, NC, USA 10 3 Division of Biological Sciences, University of Montana, Missoula, MT, USA 11 4 Department of Biology and Department of Psychology, University of Nebraska Omaha, 12 Omaha, NE, USA 13 14 † Both authors contributed equally to this work 15 16 Acknowledgements: Preparation of this manuscript was supported by an Arnold and Mabel 17 Beckman Foundation Beckman Young Investigator Award to RBR and by NIH grant 18 R01GM101095 to JTS 19 20 Declarations of interest: none 21 22 23 Address Correspondence to: 24 25 Zachary Johnson 26 E-mail: [email protected] 27 Postal: 950 Atlantic Dr NW 28 Engineered Biosystems Building, 3rd floor 29 Atlanta, GA 30332 30 31 Emily Moore 32 E-mail: [email protected] 33 Postal: 32 Campus Drive 34 Division of Biological Sciences, HS 104 35 Missoula, MT, 59812 36 37 38 39 40 41 bioRxiv preprint doi: https://doi.org/10.1101/525378; this version posted January 22, 2019. -
Teleostei: Cichlidae) with Description of a New Genus and Seven New Species
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/308127903 A Revision of the Pseudotropheus elongatus species group (Teleostei: Cichlidae) With Description of a New Genus and Seven New Species Article in Zootaxa · September 2016 DOI: 10.11646/zootaxa.4168.2.9 CITATIONS READS 3 2,495 3 authors: Shan Li Ad Konings Shanghai Natural History Museum, China El Paso Community College 10 PUBLICATIONS 52 CITATIONS 60 PUBLICATIONS 1,065 CITATIONS SEE PROFILE SEE PROFILE Jay Richard Stauffer Pennsylvania State University 244 PUBLICATIONS 4,730 CITATIONS SEE PROFILE Some of the authors of this publication are also working on these related projects: TROPICAL PROTIST-MOLLUSK EPIBIOSIS. Diatoms and other protists on minute snail periostracum View project Fishes of Pennsylvania View project All content following this page was uploaded by Ad Konings on 21 November 2016. The user has requested enhancement of the downloaded file. Zootaxa 4168 (2): 353–381 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2016 Magnolia Press ISSN 1175-5334 (online edition) http://doi.org/10.11646/zootaxa.4168.2.9 http://zoobank.org/urn:lsid:zoobank.org:pub:C1C701D7-B409-43FB-BB36-78F880B8D178 A Revision of the Pseudotropheus elongatus species group (Teleostei: Cichlidae) With Description of a New Genus and Seven New Species SHAN LI1,4, ADRIANUS F. KONINGS3 & JAY R. STAUFFER, JR.2 1Shanghai Natural History Museum, Branch of Shanghai Science & Technology Museum, 510 West Beijing Rd, Jingan District, Shanghai, China 200041. E-mail: [email protected] 2Department of Ecosystem Science and Management, The Pennsylvania State University, University Park, PA, USA 16802; Honorary Research Associate, South African Institute of Aquatic Biodiversity, Grahamstown, South Africa. -
Golden Tropheops (Tropheops Tropheops) Ecological Risk Screening Summary
Golden Tropheops (Tropheops tropheops) Ecological Risk Screening Summary U.S. Fish & Wildlife Service, November 2014 Revised, December 2017 Web Version, 11/6/2019 1 Native Range and Status in the United States Native Range From Froese and Pauly (2017): “Africa: Endemic to Lake Malawi. Recorded from Maleri Islands to Chinyamwezi Rocks [Konings 1990].” From Kasembe (2006): “Endemic to Lake Malawi. Known from Maleri Island, Chemwezi rocks, Chinyankhwazi Island and Chinyamwezi Island.” Status in the United States There were no records of established populations of Tropheops tropheops in the United States. 1 From Nico (2017): “One specimen [Pseudotropheus sp.] was taken with a hook and line from the San Marcos River below the Spring Lake dam in Hays County, Texas, on 3 September 1991 (Whiteside and Berkhouse 1992).” “Many members of the mbuna cichlids are popular in the aquarium trade.” Tropheops tropheops was bred in captivity in the United States in 1979 (Anonymous 1981: listed under the name Pseudotropheus tropheops). Tropheops tropheops was imported to the United States in October 1992 (Chapman et al. 1994: listed under the name Pseudotropheus tropheops). Means of Introductions in the United States From Nico (2017): “Probable aquarium release (Whiteside and Berkhouse 1992).” Remarks From Kasembe (2006): “Red List Category & Criteria: Vulnerable D2 ver 3.1” The valid name for this species is Tropheops tropheops (Eschemeyer et al. 2017). Some databases have not included this update and still use an older name, Pseduotropheus tropheops (ITIS 2017). Information searches were conducted using both names to gather as much relevant information about the species as possible for the assessment. -
Ecomorphological Divergence and Habitat Lability in the Context of Robust Patterns of Modularity in the Cichlid Feeding Apparatus Andrew J
Conith et al. BMC Evolutionary Biology (2020) 20:95 https://doi.org/10.1186/s12862-020-01648-x RESEARCH ARTICLE Open Access Ecomorphological divergence and habitat lability in the context of robust patterns of modularity in the cichlid feeding apparatus Andrew J. Conith1* , Michael R. Kidd2, Thomas D. Kocher3 and R. Craig Albertson1 Abstract Background: Adaptive radiations are characterized by extreme and/or iterative phenotypic divergence; however, such variation does not accumulate evenly across an organism. Instead, it is often partitioned into sub-units, or modules, which can differentially respond to selection. While it is recognized that changing the pattern of modularity or the strength of covariation (integration) can influence the range or rate of morphological evolution, the relationship between shape variation and covariation remains unclear. For example, it is possible that rapid phenotypic change requires concomitant changes to the underlying covariance structure. Alternatively, repeated shifts between phenotypic states may be facilitated by a conserved covariance structure. Distinguishing between these scenarios will contribute to a better understanding of the factors that shape biodiversity. Here, we explore these questions using a diverse Lake Malawi cichlid species complex, Tropheops, that appears to partition habitat by depth. Results: We construct a phylogeny of Tropheops populations and use 3D geometric morphometrics to assess the shape of four bones involved in feeding (mandible, pharyngeal jaw, maxilla, pre-maxilla) in populations that inhabit deep versus shallow habitats. We next test numerous modularity hypotheses to understand whether fish at different depths are characterized by conserved or divergent patterns of modularity. We further examine rates of morphological evolution and disparity between habitats and among modules. -
Expression Variations in Ectodysplasin-A Gene (Eda) May Contribute To
bioRxiv preprint doi: https://doi.org/10.1101/2021.08.25.457685; this version posted August 27, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Expression variations in Ectodysplasin-A gene (eda) may contribute to 2 morphological divergence of scales in Haplochromine cichlids 3 4 Authors 5 Maximilian Wagner1,2* 6 Email: [email protected] 7 8 Sandra Bračun1* 9 Email: [email protected] 10 11 Anna Duenser1, 12 Email: [email protected] 13 14 Christian Sturmbauer1, 15 Email: [email protected] 16 17 Wolfgang Gessl1, 18 Email: [email protected] 19 20 Ehsan Pashay Ahi1,3, 21 Email: [email protected] 22 23 24 1. Institute of Biology, University of Graz, Universitätsplatz 2, A-8010 Graz, Austria. 25 26 2. Department of Biology, University of Antwerp, Groenenborgerlaan 171, 2020 Antwerp, 27 Belgium. 28 29 3. Organismal and Evolutionary Biology Research Programme, University of Helsinki, 30 Viikinkaari 9, 00014, Helsinki, Finland. 31 32 33 Corresponding Authors: 34 35 Ehsan Pashay Ahi, 36 Email: [email protected] 37 38 Christian Sturmbauer, 39 Email: [email protected] 40 41 * The first two authors contributed equally to this study 42 43 44 45 46 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.08.25.457685; this version posted August 27, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
Biota Colombiana Vol
Biota Colombiana Vol. 12 Número 1 Enero - junio de 2011 Una publicación del /A publication of: Instituto Alexander von Humboldt En asocio con /In collaboration with: Instituto de Ciencias Naturales de la Universidad Nacional de Colombia Instituto de Investigaciones Marinas y Costeras - Invemar IOTA OLOMBIANA Missouri Botanical Garden B C ISSN 0124-5376 Volumen 12 Número 1 Enero - junio de 2011 Primer registro del dinoflagelado Neoceratium digitatum (Schütt) Gómez, Moreira y López- García 2009 (Dinophyceae), en aguas del Caribe colombiano Terebélidos (Terebellidae: Polychaeta: Annelida) del Caribe colombiano Apistogramma megaptera (Perciformes: TABLA DE CONTENIDO / TABLE OF CONTENTS Cichlidae), una nueva especie para la cuenca del Orinoco Aves del departamento de Terebélidos (Terebellidae: Polychaeta: Annelida) del Caribe colombiano - Mario H. Lóndoño Mesa ........................................ 1 Nariño, Colombia Peces del departamento de Caldas, Colombia Nuevos datos sobre la presencia de caimán llanero (Crocodylus intermedius) y notas sobre su comportamiento Apistogramma megaptera (Perciformes: Cichlidae), una nueva especie para la cuenca del Orinoco - Lina M. Mesa Salazar y en el río Vichada, Orinoquia (Colombia) Primer registro del dinoflagelado Neoceratium Carlos A. Lasso ............................................................................................................................................................................ 19 digitatum (Schütt) Gómez, Moreira y López-García 2009 (Dinophyceae), en aguas del Aves -
An Investigation of the Utility of Feeding Angles Among Lake Malawi Rock-Dwelling Cichlids (Teleostei: Cichlidae)
Copeia,2006(2), pp. 289-292 An Investigation of the Utility of Feeding Angles Among Lake Malawi Rock-dwelling Cichlids (Teleostei: Cichlidae) JAY R. STAUFFER, JR. AND ISA POSNER Image analysis was used to measure feeding angles of Labeotropheustrewavasae, Labeotropheusfulleborni, Melanochromis auratus, Metriaclima zebra, Petrotilapia spp., Pseudotropheusc.f. elongatus, Tropheopstropheops, and Tropheopsgracilior videotaped in Lake Malawi. Petrotilapiaspp. fed on vertical, slanted, and horizontal slopes, T. gracilor grazed on vertical slopes approximately.60% of the time, and the other species spent at least 80% of the time feeding on horizontal slopes. The median feeding angles ranged from 35' to 900. There are four significantly different groups of feeding angles among the eight rock-dwelling species that were examined: (1) L. trewavasae (35"), (2) L. fulleborni, M. auratus, and P. elongatus (44.8-48.5?), (3) T. tropheops (58.40), and (4) Petrotilapiaspp., T. gracilior, and M. zebra (84.2-90.20). Feeding angles within a species did not vary with location or differences in fish community structure. Feeding angles were associated with a combination of mouth position and head shape. We hypothesized that feeding angles may be important in differential access to food. ICHLIDAE are fishes of the lowland tropics habitat preferences and depth distributions C (Stiassny, 1991), with eighty percent of all (Lewis, 1981; Witte, 1984). Distribution of several cichlid species found in Africa (Fryer and Iles, species of mbuna were correlated with depth, 1972). Although the estimate of the number of (Ribbink et al., 1983b), oxygen levels, algae African cichlid species varies, it is generally production (Sharp, 1981; Reinthal, 1987), size accepted that the African rift valley lakes are of rock, interstitial space (Ribbink et al., 1983b), the most speciose freshwater lakes in the world. -
Genetic and Developmental Origins of a Unique Foraging Adaptation in a Lake Malawi Cichlid Genus
Genetic and developmental origins of a unique foraging adaptation in a Lake Malawi cichlid genus Moira R. Conitha, Yinan Hub,c, Andrew J. Conithd, Maura A. Maginnisd, Jacqueline F. Webbb, and R. Craig Albertsond,1 aGraduate Program in Organismic and Evolutionary Biology, University of Massachusetts, Amherst, MA 01003; bDepartment of Biological Sciences, University of Rhode Island, Kingston, RI 02881; cBiology Department, Boston College, Chestnut Hill, MA 02467; and dDepartment of Biology, University of Massachusetts, Amherst, MA 01003 Edited by Hopi E. Hoekstra, HHMI and Harvard University, Cambridge, MA, and approved May 29, 2018 (received for review November 13, 2017) Phenotypic novelties are an important but poorly understood from model organisms, which are selected in part because of their category of morphological diversity. They can provide insights into conserved phenotypes (16, 17). Additionally, novel phenotypes of- the origins of phenotypic variation, but we know relatively little ten have ancient origins and/or occur in lineages that are not about their genetic origins. Cichlid fishes display remarkable diversity amenable to laboratory investigations. Here, we address the origin in craniofacial anatomy, including several novelties. One aspect of this of a novel phenotype by identifying the genetic mechanisms un- variation is a conspicuous, exaggerated snout that has evolved in derlying tissue-level changes of a unique craniofacial morphology in a single Malawi cichlid lineage and is associated with foraging a genus of cichlid from Lake Malawi, Africa. Cichlids are an iconic model system for the study of rapid and specialization and increased ecological success. We examined the – developmental and genetic origins for this phenotype and found that extensive craniofacial diversification (18 20).