Cistanche Tubulosa Extract
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Haloxylon Ammodendron (Chenopodiaceae)
Complete Chloroplast Genome Sequence of Holoparasite Cistanche deserticola (Orobanchaceae) Reveals Gene Loss and Horizontal Gene Transfer from Its Host Haloxylon ammodendron (Chenopodiaceae) Xi Li1., Ti-Cao Zhang1., Qin Qiao1, Zhumei Ren2, Jiayuan Zhao1, Takahiro Yonezawa1, Masami Hasegawa1, M. James C Crabbe3, Jianqiang Li4*, Yang Zhong1,5* 1 Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, China, 2 College of Life Science and Technology, Shanxi University, Taiyuan, China, 3 Faculty of Creative Arts, Technologies and Science, Institute of Biomedical, Environmental Science and Technology, University of Bedfordshire, Luton, United Kingdom, 4 Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China, 5 Institute of Biodiversity Science and Geobiology, Tibet University, Lhasa, China Abstract Background: The central function of chloroplasts is to carry out photosynthesis, and its gene content and structure are highly conserved across land plants. Parasitic plants, which have reduced photosynthetic ability, suffer gene losses from the chloroplast (cp) genome accompanied by the relaxation of selective constraints. Compared with the rapid rise in the number of cp genome sequences of photosynthetic organisms, there are limited data sets from parasitic plants. Principal Findings/Significance: Here we report the complete sequence of the cp genome of Cistanche deserticola,a holoparasitic desert species belonging to the family Orobanchaceae. The cp genome of C. deserticola is greatly reduced both in size (102,657 bp) and in gene content, indicating that all genes required for photosynthesis suffer from gene loss and pseudogenization, except for psbM. The striking difference from other holoparasitic plants is that it retains almost a full set of tRNA genes, and it has lower dN/dS for most genes than another close holoparasitic plant, E. -
Worldwide Trends on Cistanche Species in 1968–2016
International Journal of Scientific & Engineering Research Volume 9, Issue 10, October-2018 2038 ISSN 2229-5518 Worldwide trends on Cistanche species in 1968–2016 Zhixia Du1,2, Jin Pei*, Linfang Huang* 1 Chengdu University of Traditional Chinese Medicine, Chengdu 611137, Sichuan. 2Institute of Medicinal Plant Development (IMPLAD), Chinese Academy of Medical Sciences (CAMS),Peking Union Medical College (PUMC), Beijing 100193, China Correspondence: [email protected]; Tel.:+86-028-61800235. [email protected];Tel.: +86-10-5783-3197. Abstract Cistanche provides benefits not only to desert control but also to the economy because this plant exhibits a high medicinal value and grows under drought conditions. This study aimed to comprehensively analyse Cistanche species by using a visual method based on data from Web of Science (WoS). Bibliometrics and network analysis were employed to investigate various items, including countries, institutions, and frequently cited articles and keywords from 272 articles about Cistanche in 1968–2016. Results showed an increase in the number of Cistanche-related published documents, and China is the leading country with 175 documents. Japan also presented an outstanding achievement (34 documents) and ranked second. Close cooperation existed between China and Japan. Pharmacology and pharmacy were the most popular subjects, followed by chemistry and plant sciences. The most frequently cited article was related to the pharmacology of Cistanche tubulosa. Our keyword analysis revealed that scholars prone to research the pharmacology of phenylethanoid glycosides in C. deserticola and C. tubulosa. This study explored the differences betweenIJSER C. deserticola and C. tubulosa, including their morphological characteristics, host plants and pharmacological effects. Overall, our results provided valuable information for further research on Cistanche. -
China: a Rich Flora Needed of Urgent Conservationprovided by Digital.CSIC
Orsis 19, 2004 49-89 View metadata, citation and similar papers at core.ac.uk brought to you by CORE China: a rich flora needed of urgent conservationprovided by Digital.CSIC López-Pujol, Jordi GReB, Laboratori de Botànica, Facultat de Farmàcia, Universitat de Barcelona, Avda. Joan XXIII s/n, E-08028, Barcelona, Catalonia, Spain. Author for correspondence (E-mail: [email protected]) Zhao, A-Man Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, The People’s Republic of China. Manuscript received in april 2004 Abstract China is one of the richest countries in plant biodiversity in the world. Besides to a rich flora, which contains about 33 000 vascular plants (being 30 000 of these angiosperms, 250 gymnosperms, and 2 600 pteridophytes), there is a extraordinary ecosystem diversity. In addition, China also contains a large pool of both wild and cultivated germplasm; one of the eight original centers of crop plants in the world was located there. China is also con- sidered one of the main centers of origin and diversification for seed plants on Earth, and it is specially profuse in phylogenetically primitive taxa and/or paleoendemics due to the glaciation refuge role played by this area in the Quaternary. The collision of Indian sub- continent enriched significantly the Chinese flora and produced the formation of many neoen- demisms. However, the distribution of the flora is uneven, and some local floristic hotspots can be found across China, such as Yunnan, Sichuan and Taiwan. Unfortunately, threats to this biodiversity are huge and have increased substantially in the last 50 years. -
Accepted Manuscript
Diverse trajectories of plastome degradation in holoparasitic Cistanche and the whereabouts of the lost plastid genes Downloaded from https://academic.oup.com/jxb/advance-article-abstract/doi/10.1093/jxb/erz456/5602659 by Harvard Library user on 01 November 2019 Xiaoqing Liu1, Weirui Fu1, Yiwei Tang1, Wenju Zhang1, Zhiping Song1, Linfeng Li1, Ji Yang1, Hong Ma2,3, Jianhua Yang4, Chan Zhou5, Charles C. Davis6 and Yuguo Wang1,† 1 Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, School of Life Sciences, Fudan University, Shanghai 200433, China 2 State Key Laboratory of Genetic Engineering, School of Life Sciences, Institute of Plant Biology, Center for Evolutionary Biology, Fudan University, Shanghai 200433, China 3 Department of Biology, Institute of Molecular Evolutionary Genetics, and the Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, Pennsylvania 16802, USA 4 College of Pharmacy, The First Affiliated Hospital, Xinjiang Medical University, Urumqi 830011, China 5 Department of Population and Quantitative Health Sciences, Massachusetts General Hospital, 55 Lake Ave North Worcester, MA 01605, USA 6 Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, MA 02138, USA † Correspondence: [email protected]; Tel: 0086-21-31246697 Accepted Manuscript The email address for each author: Xiaoqing Liu, [email protected]; Weirui Fu, [email protected]; Yiwei Tang, -
TERIZATION of HOLOPARASITIC PLANT, Cistanche Phelypea L. in SIWA OASIS, EGYPT
MORPHOLOGICAL AND MOLECULAR GENETICS CHARAC- TERIZATION OF HOLOPARASITIC PLANT, Cistanche phelypea L. IN SIWA OASIS, EGYPT H. E. ELWAKIL1, N. R. ABDELSALAM1, REHAM M. ABD EL-AZEEM2, A. A. HEMEIDA3, NERMEEN Y. ABASS1 AND A. NASSAR 1. Department of Agricultural Botany, Faculty of agriculture-Saba Basha, Alexandria Univ., Egypt 2. Dept. of Environ. Biotechnology, Institute of Genet. Eng. and Biotechnology, Univ. of Minufiya 3. Dept. of Bioinformatics, Institute of Genetic Engineering and Biotechnology, Univ. of Minufiya 4. Plant Protection Dept., Faculty of Agricultural, Damnhour Univ. gypt is famous for a vast desert is represented in Egypt by four species E spaces. About 4/5 the total area is namely C. phelypaea C. tubulosa, C. desert. Only about one-fifth of the total violacea and C. salsa (Vivi Tackholm, area is cultivated land. Most of the soils 1974; Boulos 2002). In the observed and of this desert are sand dunes, sand sheets, collected areas,Cistanche phelypaea re- sand bed rock, sandstone, limestone and stricted its host range in two families only, salt marshes. In the western desert of Chenopodiaceae and Zygophyllaceae. Egypt there are a series of oases which This holoparasitic species which parasitic stretching longitudinally from the north to on the roots of other plants lacks chloro- the far south in a line almost parallel to the phyll and therefore cannot performs pho- Nile valley. This represents natural de- tosynthesis. So it is an obligate parasite pressions rich in natural springs and wells which totally depends on its host for wa- which are used in agriculture. One of the ter, minerals and organic nutrients advantages of this desert is the presence of (Boulos, 2002). -
Based Probes Reveals a Large-Scale Phylogeny of 412 Bamboos
Wang et al. BMC Plant Biology (2021) 21:76 https://doi.org/10.1186/s12870-020-02779-5 RESEARCH ARTICLE Open Access Targeted enrichment of novel chloroplast- based probes reveals a large-scale phylogeny of 412 bamboos Jiongliang Wang1,2†, Weixue Mu3†, Ting Yang3, Yue Song3, Yin Guang Hou1,2, Yu Wang1,2, Zhimin Gao1,2, Xin Liu3, Huan Liu3 and Hansheng Zhao1,2* Abstract Background: The subfamily Bambusoideae belongs to the grass family Poaceae and has significant roles in culture, economy, and ecology. However, the phylogenetic relationships based on large-scale chloroplast genomes (CpGenomes) were elusive. Moreover, most of the chloroplast DNA sequencing methods cannot meet the requirements of large-scale CpGenome sequencing, which greatly limits and impedes the in-depth research of plant genetics and evolution. Results: To develop a set of bamboo probes, we used 99 high-quality CpGenomes with 6 bamboo CpGenomes as representative species for the probe design, and assembled 15 M unique sequences as the final pan-chloroplast genome. A total of 180,519 probes for chloroplast DNA fragments were designed and synthesized by a novel hybridization-based targeted enrichment approach. Another 468 CpGenomes were selected as test data to verify the quality of the newly synthesized probes and the efficiency of the probes for chloroplast capture. We then successfully applied the probes to synthesize, enrich, and assemble 358 non-redundant CpGenomes of woody bamboo in China. Evaluation analysis showed the probes may be applicable to chloroplasts in Magnoliales, Pinales, Poales et al. Moreover, we reconstructed a phylogenetic tree of 412 bamboos (358 in-house and 54 published), supporting a non-monophyletic lineage of the genus Phyllostachys. -
Limited Mitogenomic Degradation in Response to a Parasitic Lifestyle in Orobanchaceae Weishu Fan University of Nebraska-Lincoln, [email protected]
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications from the Center for Plant Plant Science Innovation, Center for Science Innovation 2016 Limited mitogenomic degradation in response to a parasitic lifestyle in Orobanchaceae Weishu Fan University of Nebraska-Lincoln, [email protected] Andan Zhu University of Nebraska-Lincoln Melisa Kozaczek University of Nebraska-Lincoln Neethu Shah University of Nebraska-Lincoln Natalia Pabón-Mora Universidad de Antioquia See next page for additional authors Follow this and additional works at: http://digitalcommons.unl.edu/plantscifacpub Part of the Plant Biology Commons, Plant Breeding and Genetics Commons, and the Plant Pathology Commons Fan, Weishu; Zhu, Andan; Kozaczek, Melisa; Shah, Neethu; Pabón-Mora, Natalia; González, Favio; and Mower, Jeffrey P., "Limited mitogenomic degradation in response to a parasitic lifestyle in Orobanchaceae" (2016). Faculty Publications from the Center for Plant Science Innovation. 156. http://digitalcommons.unl.edu/plantscifacpub/156 This Article is brought to you for free and open access by the Plant Science Innovation, Center for at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications from the Center for Plant Science Innovation by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Authors Weishu Fan, Andan Zhu, Melisa Kozaczek, Neethu Shah, Natalia Pabón-Mora, Favio González, and Jeffrey P. Mower This article is available at DigitalCommons@University of Nebraska - Lincoln: http://digitalcommons.unl.edu/plantscifacpub/156 www.nature.com/scientificreports OPEN Limited mitogenomic degradation in response to a parasitic lifestyle in Orobanchaceae Received: 14 June 2016 Weishu Fan1,2, Andan Zhu1,2, Melisa Kozaczek1, Neethu Shah1,3, Natalia Pabón-Mora4, Accepted: 13 October 2016 Favio González5 & Jeffrey P. -
Rapidly Simultaneous Determination of Six Effective Components in Cistanche Tubulosa by Near Infrared Spectroscopy
Communication Rapidly Simultaneous Determination of Six Effective Components in Cistanche tubulosa by Near Infrared Spectroscopy Xinhong Wang, Xiaoguang Wang and Yuhai Guo * College of Agronomy, China Agricultural University, Yuanming Yuan West Road, Haidian District, Beijing 100193, China; [email protected] (X.W.); [email protected] (X.W.) * Correspondence: [email protected]; Tel./Fax: +86-010-6273-2556 Academic Editor: Derek McPhee Received: 11 April 2017; Accepted: 16 May 2017; Published: 19 May 2017 Abstract: Quantitative determination of multiple effective components in a given plant usually requires a very large amount of authentic natural products. In this study, we proposed a rapid and non-destructive method for the simultaneous determination of echinacoside, verbascoside, mannitol, sucrose, glucose and fructose in Cistanche tubulosa by near infrared spectroscopy (NIRS). Near infrared diffuse reflectance spectroscopy (DRS) and high performance liquid chromatography (HPLC) were conducted on 116 batches of C. tubulosa samples. The DRS data were processed using standard normal variety (SNV) and multiplicative scatter correction (MSC) methods. Partial least squares regression (PLSR) was utilized to build calibration models for components-of-interest in C. tubulosa. All models were then assessed by calculating the root mean square error of calibration (RMSEC), correlation coefficient of calibration (r). The r values of all six calibration models were determined to be greater than 0.94, suggesting each model is reliable. Therefore, the quantitative NIR models reported in this study can be qualified to accurately quantify the contents of six medicinal components in C. tubulosa. Keywords: Cistanche tubulosa; high performance liquid chromatography; near infrared spectroscopy; partial least squares 1. -
Effects of Cistanche Deserticola Extract on Penis Erectile Response in Castrated Rats
Effects of Cistanche deserticola extract on penis erectile response in castrated rats Li Gu, Wen Ting Xiong, Yan Lei Zhuang, Jian Shuang Zhang and Xin Liu* Food and Health Engineering Research Center of State Education Ministry, Sun Yat-sen University, Guangzhou, China Abstract: Cistanche deserticola (CD) has been considered as a tonic agent on reproductive function for thousands of years. The effects of CD extract on penis erectile response were investigated in present study. After castration surgery, rats were treated intragastrically with CD extract (0.45, 0.90 and 1.8 g/kg) daily for four weeks. Penis erectile response was measured and the serum hormones were assayed at the end of the experiment. It was evaluated that the erectile latency became longer and the erectile duration shorter significantly in castrated rats compared to sham operated controls. However, CD extract shortened the erectile latency and prolonged the erectile duration to minimize the negative effects of castration. At the dosage of 0.9g/kg, CD extract regulated the serum luteinizing hormone concentration approach to normal level in castrated rats. These findings indicated that CD facilitated the penis erectile response and modulated the serum hormone level to some extent. Keywords: Cistanche deserticola; erectile response; castration; hormone. INTRODUCTION Erectile dysfunction (ED) is a condition characterized by either inadequate erection of the penis or erection that Cistanche Hoffmg. Et Link, one of the genera of the does not last sufficiently long in adult males (Cohan and Orobanchaceae family, is mainly distributed in the arid Korenman 2000). In response to modern, sophisticated, lands and deserts in the northern hemisphere, such as chemical agents, there has been a renewed interest to Inner Mongolia, Xinjiang, Ningxia autonomous regions of search effective and safe medication from plants for the China, and Iran, India, Mongolia, etc. -
Echinacoside Isolated from Cistanche Tubulosa Putatively Stimulates Growth Hormone Secretion Via Activation of the Ghrelin Receptor
molecules Article Echinacoside Isolated from Cistanche tubulosa Putatively Stimulates Growth Hormone Secretion via Activation of the Ghrelin Receptor Chieh-Ju Wu 1, Mei-Yin Chien 2, Nan-Hei Lin 1, Yi-Chiao Lin 1, Wen-Ying Chen 3, Chao-Hsiang Chen 2,4,* and Jason T. C. Tzen 1,* 1 Graduate Institute of Biotechnology, National Chung-Hsing University, Taichung 402, Taiwan; [email protected] (C.-J.W.); [email protected] (N.-H.L.); [email protected] (Y.-C.L.) 2 Ko Da Pharmaceutical Co. Ltd., Taoyuan 324, Taiwan; [email protected] 3 Department of Veterinary Medicine, National Chung-Hsing University, Taichung 402, Taiwan; [email protected] 4 Graduate Institute of Pharmacognosy, Taipei Medical University, Taipei 110, Taiwan * Correspondence: [email protected] (C.-H.C.); [email protected] (J.T.C.T.); Tel.: +886-4-22840328 (ext. 776) (J.T.C.T.); Fax: +886-4-22853527 (J.T.C.T.) Academic Editor: Pinarosa Avato Received: 22 January 2019; Accepted: 14 February 2019; Published: 17 February 2019 Abstract: Cistanche species, the ginseng of the desert, has been recorded to possess many biological activities in traditional Chinese pharmacopoeia and has been used as an anti-aging medicine. Three phenylethanoid glycosides—echinacoside, tubuloside A, and acteoside—were detected in the water extract of Cistanche tubulosa (Schenk) R. Wight and the major constituent, echinacoside, was further purified. Echinacoside of a concentration higher than 10−6 M displayed significant activity to stimulate growth hormone secretion of rat pituitary cells. Similar to growth hormone-releasing hormone-6, a synthetic analog of ghrelin, the stimulation of growth hormone secretion by echinacoside was inhibited by [D-Arg1, D-Phe5, D-Trp7,9, Leu11]-substance P, an inverse agonist of the ghrelin receptor. -
Comparative and Phylogenetic Analyses of the Chloroplast Genomes of Species of Paeoniaceae
www.nature.com/scientificreports OPEN Comparative and phylogenetic analyses of the chloroplast genomes of species of Paeoniaceae Liwei Wu1,2, Liping Nie1,2, Qing Wang1,2, Zhichao Xu1,2, Yu Wang1, Chunnian He1, Jingyuan Song1,2 & Hui Yao1,2* Plants belonging to family Paeoniaceae are not only economically important ornamental plants but also medicinal plants used as an important source of traditional Chinese medicine. Owing to the complex network evolution and polyploidy evolution of this family, its systematics and taxonomy are controversial and require a detailed investigation. In this study, three complete chloroplast genomes of sect. Paeonia, one of the sections of Paeonia, were sequenced and then analysed together with 16 other published chloroplast genomes of Paeoniaceae species. The total lengths of the chloroplast genomes of these species were 152,153–154,405 bp. A total of 82–87 protein-coding genes, 31–40 tRNA genes and 8 rRNA genes were annotated. Bioinformatics analysis revealed 61–74 simple sequence repeats (SSRs) in the chloroplast genomes, most of which have A/T base preference. Codon usage analysis showed that A/U-ending codons were more positive than C/G-ending codons, and a slight bias in codon usage was observed in these species. A comparative analysis of these 19 species of Paeoniaceae was then conducted. Fourteen highly variable regions were selected for species relationship study. Phylogenetic analysis revealed that the species of sect. Paeonia gathered in one branch and then divided into diferent small branches. P. lactifora, P. anomala, P. anomala subsp. veitchii and P. mairei clustered together. P. intermedia was related to P. -
Characterization and Comparative Analysis of the Complete Chloroplast Genome of the Critically Endangered Species Streptocarpus Teitensis (Gesneriaceae)
Hindawi BioMed Research International Volume 2018, Article ID 1507847, 11 pages https://doi.org/10.1155/2018/1507847 Research Article Characterization and Comparative Analysis of the Complete Chloroplast Genome of the Critically Endangered Species Streptocarpus teitensis (Gesneriaceae) Cornelius M. Kyalo ,1,2,3 Andrew W. Gichira,1,2,3 Zhi-Zhong Li,1,2,3 Josphat K. Saina,1,2,3 Itambo Malombe,4 Guang-Wan Hu ,1,3 and Qing-Feng Wang 1,3 1 Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China 2University of Chinese Academy of Sciences, Beijing 100049, China 3Sino-Africa Joint Research Center, Chinese Academy of Sciences, Wuhan 430074, China 4East African Herbarium, National Museums of Kenya, P.O. Box 45166-00100, Nairobi, Kenya Correspondence should be addressed to Guang-Wan Hu; [email protected] and Qing-Feng Wang; [email protected] Received 18 October 2017; Revised 27 December 2017; Accepted 28 January 2018; Published 25 March 2018 Academic Editor: Stanley Brul Copyright © 2018 Cornelius M. Kyalo et al. Tis is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Streptocarpus teitensis (Gesneriaceae) is an endemic species listed as critically endangered in the International Union for Conservation of Nature (IUCN) red list of threatened species. However, the sequence and genome information of this species remains to be limited. In this article, we present the complete chloroplast genome structure of Streptocarpus teitensis and its evolution inferred through comparative studies with other related species.