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Systematics, Barcoding and Ecology of Fungi from Waxcap Grasslands in Britain
Project report to DEFRA 1: 3 December 2010 Systematics, barcoding and ecology of fungi from waxcap grasslands in Britain Collaborations An important component of the project is to bring together professional scientists and specialist volunteers to contribute specimens and ecological data, and later on to explore ways of improving the existing recording and monitoring schemes. The project will provide valuable data to aid decision-making for conservation management, for example designation of SSSIs and establishment of red data lists. The first action was therefore to publicize the project to potential collaborators, and emails and verbal communications took place both directly with known collectors/recording groups and through the British Mycological Society. Excluding those named in the project application, 33 individuals/recording groups have provided specimens and/or identification data. Our initial request was for all species of Hygrocybe and Geoglossaceae. While a number of these are common and widespread, there are concerns that existing species concepts are too broad and are masking cryptic taxa. Along with specimens that we have collected ourselves, we have received a total of 213 collections belonging to 34 species/varieties of Hygrocybe and four species of Geoglossaceae. The collections have come from 27 different vice-counties in England, Wales and Scotland. Much of the field season was poor for waxcap species, although a number of species fruited abnormally late in the year. With this in mind, we are very happy with the response we have received from field workers, and there has been a widespread welcome for our project. We are confident that our field collaborators will continue to support our work throughout the project period and beyond. -
Development and Evaluation of Rrna Targeted in Situ Probes and Phylogenetic Relationships of Freshwater Fungi
Development and evaluation of rRNA targeted in situ probes and phylogenetic relationships of freshwater fungi vorgelegt von Diplom-Biologin Christiane Baschien aus Berlin Von der Fakultät III - Prozesswissenschaften der Technischen Universität Berlin zur Erlangung des akademischen Grades Doktorin der Naturwissenschaften - Dr. rer. nat. - genehmigte Dissertation Promotionsausschuss: Vorsitzender: Prof. Dr. sc. techn. Lutz-Günter Fleischer Berichter: Prof. Dr. rer. nat. Ulrich Szewzyk Berichter: Prof. Dr. rer. nat. Felix Bärlocher Berichter: Dr. habil. Werner Manz Tag der wissenschaftlichen Aussprache: 19.05.2003 Berlin 2003 D83 Table of contents INTRODUCTION ..................................................................................................................................... 1 MATERIAL AND METHODS .................................................................................................................. 8 1. Used organisms ............................................................................................................................. 8 2. Media, culture conditions, maintenance of cultures and harvest procedure.................................. 9 2.1. Culture media........................................................................................................................... 9 2.2. Culture conditions .................................................................................................................. 10 2.3. Maintenance of cultures.........................................................................................................10 -
Appendix K. Survey and Manage Species Persistence Evaluation
Appendix K. Survey and Manage Species Persistence Evaluation Establishment of the 95-foot wide construction corridor and TEWAs would likely remove individuals of H. caeruleus and modify microclimate conditions around individuals that are not removed. The removal of forests and host trees and disturbance to soil could negatively affect H. caeruleus in adjacent areas by removing its habitat, disturbing the roots of host trees, and affecting its mycorrhizal association with the trees, potentially affecting site persistence. Restored portions of the corridor and TEWAs would be dominated by early seral vegetation for approximately 30 years, which would result in long-term changes to habitat conditions. A 30-foot wide portion of the corridor would be maintained in low-growing vegetation for pipeline maintenance and would not provide habitat for the species during the life of the project. Hygrophorus caeruleus is not likely to persist at one of the sites in the project area because of the extent of impacts and the proximity of the recorded observation to the corridor. Hygrophorus caeruleus is likely to persist at the remaining three sites in the project area (MP 168.8 and MP 172.4 (north), and MP 172.5-172.7) because the majority of observations within the sites are more than 90 feet from the corridor, where direct effects are not anticipated and indirect effects are unlikely. The site at MP 168.8 is in a forested area on an east-facing slope, and a paved road occurs through the southeast part of the site. Four out of five observations are more than 90 feet southwest of the corridor and are not likely to be directly or indirectly affected by the PCGP Project based on the distance from the corridor, extent of forests surrounding the observations, and proximity to an existing open corridor (the road), indicating the species is likely resilient to edge- related effects at the site. -
LUNDY FUNGI: FURTHER SURVEYS 2004-2008 by JOHN N
Journal of the Lundy Field Society, 2, 2010 LUNDY FUNGI: FURTHER SURVEYS 2004-2008 by JOHN N. HEDGER1, J. DAVID GEORGE2, GARETH W. GRIFFITH3, DILUKA PEIRIS1 1School of Life Sciences, University of Westminster, 115 New Cavendish Street, London, W1M 8JS 2Natural History Museum, Cromwell Road, London, SW7 5BD 3Institute of Biological Environmental and Rural Sciences, University of Aberystwyth, SY23 3DD Corresponding author, e-mail: [email protected] ABSTRACT The results of four five-day field surveys of fungi carried out yearly on Lundy from 2004-08 are reported and the results compared with the previous survey by ourselves in 2003 and to records made prior to 2003 by members of the LFS. 240 taxa were identified of which 159 appear to be new records for the island. Seasonal distribution, habitat and resource preferences are discussed. Keywords: Fungi, ecology, biodiversity, conservation, grassland INTRODUCTION Hedger & George (2004) published a list of 108 taxa of fungi found on Lundy during a five-day survey carried out in October 2003. They also included in this paper the records of 95 species of fungi made from 1970 onwards, mostly abstracted from the Annual Reports of the Lundy Field Society, and found that their own survey had added 70 additional records, giving a total of 156 taxa. They concluded that further surveys would undoubtedly add to the database, especially since the autumn of 2003 had been exceptionally dry, and as a consequence the fruiting of the larger fleshy fungi on Lundy, especially the grassland species, had been very poor, resulting in under-recording. Further five-day surveys were therefore carried out each year from 2004-08, three in the autumn, 8-12 November 2004, 4-9 November 2007, 3-11 November 2008, one in winter, 23-27 January 2006 and one in spring, 9-16 April 2005. -
Two Earth-Tongue Genera New for Turkey
ISSN (print) 0093-4666 © 2013. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/125.87 Volume 125, pp. 87–90 July–September 2013 Two earth-tongue genera new for Turkey Ilgaz Akata1 & Abdullah Kaya2* 1Ankara University, Science Faculty, Department of Biology, TR 06100, Ankara, Turkey 2Karamanoglu Mehmetbey University, Science Faculty, Department of Biology, TR 70100 Karaman, Turkey *Correspondence to: [email protected] Abstract — The genera Spathulariopsis (Cudoniaceae) and Trichoglossum (Geoglossaceae) are recorded from Turkey for the first time, based on the collections of Spathulariopsis velutipes and Trichoglossum hirsutum. Short descriptions and photographs of the taxa are provided. Key words — Ascomycota, biodiversity, macrofungi Introduction Earth-tongues, including the genera Geoglossum Pers., Leotia Pers., Microglossum Gillet, Spathularia Pers., Spathulariopsis Maas Geest., and Trichoglossum Boud., are among the most widely distributed groups of fungi in the division Ascomycota. They produce large pileate tongue-shaped fruiting bodies on various substrates and are common in temperate regions. Despite their wide distribution, most have been described from North America and Southwest China (Zhuang 1998, Hustad et al. 2011, Wang et al. 2011). Spathulariopsis (Cudoniaceae) is a monotypic genus. Also known as velvet- foot fairy fan, S. velutipes forms a yellowish to brownish yellow laterally compressed fan- or spatula-like head on a narrow brownish stem, needle- shaped hyaline occasional septate ascospores, and 8-spored asci. Trichoglossum (Geoglossaceae) contains 19 species (Kirk et al. 2008), commonly known as black earth-tongues. Trichoglossum taxa are usually characterized by club-shaped brownish black fruiting bodies, smooth or velvety stipes, 7–15-septate smooth dark ascospores, large 4–8-spored asci, and a positive reaction of the apical ascus pore in Meltzer’s reagent (Arora 1986, Hansen & Knudsen 2000). -
Studies on the Geoglossaceae of Japan. II the Genus Leotia
Jan. 20, 1936.) S. 1MAj-STUDIES ON TILE GEOGLOSSACEAE OF JAPAN. 11. 9 Studies on the Geoglossaceae of Japan. II.'' The Genus Leotia. By Sanshi Imai. Received June 10, 1935. It seems that the name Leotia was first used by II1LL,in 1751. PERSOON3~established the genus Leotia in 1794 with a type species Leotia lubrica which had been formerly described by ScoPoLI under the name Elvela lubrica. In 1801,x' he added eight species, viz., Leotia Mitrula, L. Ludwigii, L. Dicksoni, L. Bulliardi, L. circinans, L. marcida, L. conica and L. Helvella. In 1822,' he divided the genus into two sections, " Carnosae , colore plerumque flavescentes ant rubicundae" and " Cuccul- laria. Tremellosae ant carnoso-gelatinosae, terrestres, colore obscuri, fusces- centes olivaceae ant virescentes. Pileo brevi subpatulo." The former section comprised five species, L, circinans, L. Mitrula, L. truncorum, L. clavus and L, uliginosa, and the latter four species, viz., L. lubrica, L. marcida, L, atrovirens and L. platypoda. In 1823, FRIES6~ described ten species of Leotia and divided the genus into two tribes, Cuccullaria and Hygromitra. The former tribe was mainly characterized by the fleshy or tough texture which was persistent when dry and by the stuffed or hollow stipe. L. circinans and four indefinite or doubtful species were included in this tribe. The latter tribe was characterized as " Substantia tremellosa ant carnoso-gelatinosa, putrescens nec persistens. Pileus minus evolutus clavato-capitatns, tumens, margine subtus adnato. Stipes saepius fistulosus, gelatina plenus, sursum inerassatus & in pileum abiens. Noxiae, colore e flavo viridisque variae. Abeunt ad Tremellas mediante Trem. Helv. Deeand. ; in L. -
4118880.Pdf (10.47Mb)
Multigene Molecular Phylogeny and Biogeographic Diversification of the Earth Tongue Fungi in the Genera Cudonia and Spathularia (Rhytismatales, Ascomycota) The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Ge, Zai-Wei, Zhu L. Yang, Donald H. Pfister, Matteo Carbone, Tolgor Bau, and Matthew E. Smith. 2014. “Multigene Molecular Phylogeny and Biogeographic Diversification of the Earth Tongue Fungi in the Genera Cudonia and Spathularia (Rhytismatales, Ascomycota).” PLoS ONE 9 (8): e103457. doi:10.1371/journal.pone.0103457. http:// dx.doi.org/10.1371/journal.pone.0103457. Published Version doi:10.1371/journal.pone.0103457 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:12785861 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Multigene Molecular Phylogeny and Biogeographic Diversification of the Earth Tongue Fungi in the Genera Cudonia and Spathularia (Rhytismatales, Ascomycota) Zai-Wei Ge1,2,3*, Zhu L. Yang1*, Donald H. Pfister2, Matteo Carbone4, Tolgor Bau5, Matthew E. Smith3 1 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, China, 2 Harvard University Herbaria and Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, United States of America, 3 Department of Plant Pathology, University of Florida, Gainesville, Florida, United States of America, 4 Via Don Luigi Sturzo 173, Genova, Italy, 5 Institute of Mycology, Jilin Agriculture University, Changchun, Jilin, China Abstract The family Cudoniaceae (Rhytismatales, Ascomycota) was erected to accommodate the ‘‘earth tongue fungi’’ in the genera Cudonia and Spathularia. -
The Ascomycota
Papers and Proceedings of the Royal Society of Tasmania, Volume 139, 2005 49 A PRELIMINARY CENSUS OF THE MACROFUNGI OF MT WELLINGTON, TASMANIA – THE ASCOMYCOTA by Genevieve M. Gates and David A. Ratkowsky (with one appendix) Gates, G. M. & Ratkowsky, D. A. 2005 (16:xii): A preliminary census of the macrofungi of Mt Wellington, Tasmania – the Ascomycota. Papers and Proceedings of the Royal Society of Tasmania 139: 49–52. ISSN 0080-4703. School of Plant Science, University of Tasmania, Private Bag 55, Hobart, Tasmania 7001, Australia (GMG*); School of Agricultural Science, University of Tasmania, Private Bag 54, Hobart, Tasmania 7001, Australia (DAR). *Author for correspondence. This work continues the process of documenting the macrofungi of Mt Wellington. Two earlier publications were concerned with the gilled and non-gilled Basidiomycota, respectively, excluding the sequestrate species. The present work deals with the non-sequestrate Ascomycota, of which 42 species were found on Mt Wellington. Key Words: Macrofungi, Mt Wellington (Tasmania), Ascomycota, cup fungi, disc fungi. INTRODUCTION For the purposes of this survey, all Ascomycota having a conspicuous fruiting body were considered, excluding Two earlier papers in the preliminary documentation of the endophytes. Material collected during forays was described macrofungi of Mt Wellington, Tasmania, were confined macroscopically shortly after collection, and examined to the ‘agarics’ (gilled fungi) and the non-gilled species, microscopically to obtain details such as the size of the -
Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
A Five-Gene Phylogeny of Pezizomycotina
Mycologia, 98(6), 2006, pp. 1018–1028. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 A five-gene phylogeny of Pezizomycotina Joseph W. Spatafora1 Burkhard Bu¨del Gi-Ho Sung Alexandra Rauhut Desiree Johnson Department of Biology, University of Kaiserslautern, Cedar Hesse Kaiserslautern, Germany Benjamin O’Rourke David Hewitt Maryna Serdani Harvard University Herbaria, Harvard University, Robert Spotts Cambridge, Massachusetts 02138 Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331 Wendy A. Untereiner Department of Botany, Brandon University, Brandon, Franc¸ois Lutzoni Manitoba, Canada Vale´rie Hofstetter Jolanta Miadlikowska Mariette S. Cole Vale´rie Reeb 2017 Thure Avenue, St Paul, Minnesota 55116 Ce´cile Gueidan Christoph Scheidegger Emily Fraker Swiss Federal Institute for Forest, Snow and Landscape Department of Biology, Duke University, Box 90338, Research, WSL Zu¨ rcherstr. 111CH-8903 Birmensdorf, Durham, North Carolina 27708 Switzerland Thorsten Lumbsch Matthias Schultz Robert Lu¨cking Biozentrum Klein Flottbek und Botanischer Garten der Imke Schmitt Universita¨t Hamburg, Systematik der Pflanzen Ohnhorststr. 18, D-22609 Hamburg, Germany Kentaro Hosaka Department of Botany, Field Museum of Natural Harrie Sipman History, Chicago, Illinois 60605 Botanischer Garten und Botanisches Museum Berlin- Dahlem, Freie Universita¨t Berlin, Ko¨nigin-Luise-Straße Andre´ Aptroot 6-8, D-14195 Berlin, Germany ABL Herbarium, G.V.D. Veenstraat 107, NL-3762 XK Soest, The Netherlands Conrad L. Schoch Department of Botany and Plant Pathology, Oregon Claude Roux State University, Corvallis, Oregon 97331 Chemin des Vignes vieilles, FR - 84120 MIRABEAU, France Andrew N. Miller Abstract: Pezizomycotina is the largest subphylum of Illinois Natural History Survey, Center for Biodiversity, Ascomycota and includes the vast majority of filamen- Champaign, Illinois 61820 tous, ascoma-producing species. -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Cudonia Circinans (Persoon) Fries Cudonie Circulaire J Eon-Luc Muller
18 Cudonia circinans (Persoon) Fries Cudonie circulaire J eon-Luc Muller Cudonia circinans (Persoon ex Fries) Fries (= Leot;a c;rc;nans Persoon) Taxonomie Règne: Fung; Division: Ascomycota S/division : Pez;zomycotina Classe: Leot;omycetes Ordre: Rhytismatales Famille: Cudon;aceae Note taxonomique: En 2001, une nouvelle description a été effectuée par Cannon sur la Famille Cudoniaceae (comprenant les gemes Cudonia et Spathularia) qui la plaça dans l'ordre des Helotiales. Pourtant, suite à des études phylogéniques récentes, celle-ci a été définitivement intégrée dans l'ordre des Rhytismatales (Mycologia - NovlDec 2006). Ethymologie : Du latin circinans qui signifie "arrondie" faisant clairement référence à la forme du chapeau. Fructification : 2 à 6 cm de hauteur. Le pied, de 2 à 4(5) cm de haut avec un diamètre d'environ 2 à 6 mm, est ocre pâle et légère ment plus foncé (brun-rougeâtre) vers une base plutôt évasée. Il est fréquemment comprimé verticalement, sillonné et finement squamuleux. La tête fertile arrondie, de 1 à 2 cm de large, est quelquefois légèrement cérébriforme avec une marge emoulée. Sa surface peut-être lisse ou ridée, ocre pâle à beige nuancé de rose-lilas. Chair ferme, mince, plutôt tenace ou coriace en séchant, non gélatineuse contrairement à Leo fia lubrica son (presque) sosie. 19 Habitat: grégaires, sur lit d'aiguilles dans les pessières. Nos exemplaires proviennent d'une station de Thollon -les - Mémises, située à 2000 m d'altitude. D'août à septembre. Grégaire, parfois même en troupes très nombreuses. Comestibilité: Vénéneux, du moins cru. Contient du monométhylhydrazine (MMH), une substance très volatile, cancérogène puissant, produit d'hydrolyse de la gyromitrine.