Applications of Click Chemistry in Drug Discovery
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Hydrogenationn of 4-Octyne Catalyzedd by Pd[(M^W'- (CF3)2C6H3)) Bian](Ma) in THF
UvA-DARE (Digital Academic Repository) Palladium-catalyzed stereoselective hydrogenation of alkynes to (Z)-alkenes in common solvents and supercritical CO2 Kluwer, A.M. Publication date 2004 Link to publication Citation for published version (APA): Kluwer, A. M. (2004). Palladium-catalyzed stereoselective hydrogenation of alkynes to (Z)- alkenes in common solvents and supercritical CO2. General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:04 Oct 2021 5 Kineti5 cc study and Spectroscopic Investigationn of the semi- hydrogenationn of 4-octyne catalyzedd by Pd[(m^w'- (CF3)2C6H3)) bian](ma) in THF 5.11 Introduction Homogeneouss hydrogenation by transition metal complexes has played a key role in the fundamental understandingg of catalytic reactions and has proven to be of great utility in practical applications. -
Ethanol Production from Hydrolyzed Kraft Pulp by Mono- and Co-Cultures of Yeasts: the Challenge of C6 and C5 Sugars Consumption
energies Article Ethanol Production from Hydrolyzed Kraft Pulp by Mono- and Co-Cultures of Yeasts: The Challenge of C6 and C5 Sugars Consumption Rita H. R. Branco, Mariana S. T. Amândio, Luísa S. Serafim and Ana M. R. B. Xavier * CICECO–Aveiro Institute of Materials, Chemistry Department, University of Aveiro, Campus Universitario de; Santiago, 3810-193 Aveiro, Portugal; [email protected] (R.H.R.B.); [email protected] (M.S.T.A.); luisa.serafi[email protected] (L.S.S.) * Correspondence: [email protected]; Tel.: +351-234-370-716 Received: 27 December 2019; Accepted: 4 February 2020; Published: 8 February 2020 Abstract: Second-generation bioethanol production’s main bottleneck is the need for a costly and technically difficult pretreatment due to the recalcitrance of lignocellulosic biomass (LCB). Chemical pulping can be considered as a LCB pretreatment since it removes lignin and targets hemicelluloses to some extent. Chemical pulps could be used to produce ethanol. The present study aimed to investigate the batch ethanol production from unbleached Kraft pulp of Eucalyptus globulus by separate hydrolysis and fermentation (SHF). Enzymatic hydrolysis of the pulp resulted in a glucose yield of 96.1 3.6% and a xylose yield of 94.0 7.1%. In an Erlenmeyer flask, fermentation of the ± ± hydrolysate using Saccharomyces cerevisiae showed better results than Scheffersomyces stipitis. At both the Erlenmeyer flask and bioreactor scale, co-cultures of S. cerevisiae and S. stipitis did not show significant improvements in the fermentation performance. The best result was provided by S. cerevisiae alone in a bioreactor, which fermented the Kraft pulp hydrolysate with an ethanol yield of 0.433 g g 1 and a volumetric ethanol productivity of 0.733 g L 1 h 1, and a maximum ethanol · − · − · − concentration of 19.24 g L 1 was attained. -
Read the Book of Abstracts
2o21 ONLINE May 10- 12 2021 International Symposium on SupraBiomolecular Systems 2021 Table of Contents TBD 1 Prof. Andreas Herrmann TBD 2 Prof. Rachel O’Reilly Tackling challenges in nanomedicine with responsive supramolecular polymers and advanced mi- croscopy 3 Dr. Silvia Pujals, Mr. Edgar Fuentes, Dr. Lorenzo Albertazzi Water Soluble Nanotubular Architectures from Amphiphilic Dinucleobases 4 Dr. Fatima Aparicio, Ms. Paula Blue Chamorro, Dr. Raquel Chamorro, Prof. David Gonzalez-Rodriguez Glyconucleolipids as new drug delivery systems for Parkinson’s disease treatment 5 Mr. Anthony Cunha, Dr. Alexandra Gaubert, Prof. Philippe Barthélémy, Dr. Benjamin Dehay, Dr. Laurent Latxague Membraneless compartments based on intrinsically disordered proteins: from biology towards new pro- tein materials 6 Prof. Paolo Arosio Low Molecular Weight Oleogel formation via unique keto-enol-type nucleolipid supramolecular assembly 8 Mr. Arthur KLUFTS-EDEL, Ms. Bérangère Dessane, Dr. Aladin Hamoud, Dr. Geoffrey Prévot, Dr. Antoine Lo- quet, Dr. Brice Kauffmann, Prof. Philippe Barthélémy, Prof. Sylvie Crauste-Manciet, Dr. Valérie Desvergnes Multi-responsive supramolecular fibers from peptide-based amphiphiles 9 Mr. Edgar Fuentes, Dr. Marieke Gerth, Dr. Jose Augusto Berrocal, Dr. Carlo Matera, Prof. Pau Gorostiza, Prof. Ilja Voets, Dr. Silvia Pujals, Dr. Lorenzo Albertazzi Electrostatic Protein Assemblies Towards Biohybrid Photoactive Materials 10 Dr. Eduardo Anaya-Plaza, Prof. Mauri Kostiainen Exploring Polyoxometalates as Non-destructive Staining Agents for Contrast-Enhanced Microfocus Com- puted Tomography of Biological Tissues 11 Ms. Sarah Vangrunderbeeck, Mr. Sébastien De Bournonville, Mrs. Hong Giang T. Ly, Prof. Wim De Borggraeve, Prof. Tatjana Parac-Vogt, Prof. Greet Kerckhofs Hydrogels with Photo-Switchable Stiffness: A Tool to Mimic Extra Cellular Matrix 13 Prof. -
Supporting Information
Electronic Supplementary Material (ESI) for Organic & Biomolecular Chemistry. This journal is © The Royal Society of Chemistry 2014 Supplementary Material Nickel-Catalyzed Substitution Reactions of Propargyl Halides with Organotitanium Reagents Qing-Han Li,a,b,* Jung-Wei Liao,a Yi-Ling Huang,a Ruei-Tang Chianga and Han-Mou Gaua,* a Department of Chemistry, National Chung Hsing University, Taichung 402, Taiwan b College of Chemistry and Environmental Protection Engineering, Southwest University for Nationalities, Chengdu 610041, China e-mail: [email protected] - S1- Table of Contents I. 1H and 13C NMR Spectra of Aryltitanium Reagents S3 1. (2-MeOC6H4)Ti(O-i-Pr)3 (4e) S3 2. (2,6-Me2C6H3)Ti(O-i-Pr)3 (4j) S5 II. 1H and 13C NMR Spectra of Coupling Products S7 1. 1-Phenyl-1,2-propadiene (2aa) S7 2. 1-(4-Methylphenyl)-1,2-propadiene (2ab) S9 3. 1-(2-Methylphenyl)-1,2-propadiene (2ac) S11 4. 1-(4-Methoxyphenyl)-1,2-propadiene (2ad) S13 5. 1-(2-Methoxyphenyl)-1,2-propadiene (2ae) S15 6. 1-(3,5-Dimethylphenyl)-1,2-propadiene (2af) S17 7. 1-(2-Naphthyl)-1,2-propadiene (2ag) S19 8. 1-(4-Trifluoromethylphenyl)-1,2-propadiene (2ah) S21 9. 1-cyclohexyl-1,2-propadiene (2ai) S23 10. 1-(2,6-Dimethylphenyl)-1,2-propadiene (2aj) S25 11. 1-(2,6-Dimethylphenyl)-4-(bromomethyl)-1,2,4-pentatriene (2aj’) S27 12. 3-Phenyl-1,2-pentadiene (2ba) S29 13. 3-(2-Methylphenyl)-1,2-pentadiene (2bc) S31 14. 3-(3,5-Dimethylphenyl)-1,2-pentadiene (2bf) S33 15. 3-(2,6-Dimethylphenyl)-1,2-pentadiene (2bj) S35 16. -
Synthesis of Organometallic PNA Oligomers by Click Chemistry
Supplementary Material (ESI) for Chemical Communications This journal is (c) The Royal Society of Chemistry 2008 1 Supporting Information: Synthesis of organometallic PNA oligomers by click chemistry Gilles Gasser, Nina Hüsken, S. David Köster and Nils Metzler-Nolte* Department of Inorganic Chemistry I – Bioinorganic Chemistry, Faculty of Chemistry and Biochemistry, Ruhr-University Bochum Universitätsstrasse 150; 44801 Bochum, Germany Fax: +49 (0)234 – 32 14378; E-Mail: [email protected] Table of contents I. Experimental Section a) Materials 2 b) Instrumentation and methods 2 c) Peptide Nucleic Acid synthesis 2 d) Synthesis, characterisation and NMR spectra of Fmoc-1-OtBu, Fmoc-1-OH, Fmoc-2-OtBu and 3 3 e) Characterisation of PNA1-4 10 f) Synthesis and characterisation of Fc-PNA1-3 and Fc2-PNA4 10 II. MALDI-TOF Spectra a) Figure 5: MALDI-TOF mass spectrum of Fc-PNA1 11 b) Figure 6: MALDI-TOF mass spectrum of Fc-PNA2 12 c) Figure 7: MALDI-TOF mass spectrum of Fc-PNA3 12 d) Figure 8: MALDI-TOF mass spectrum of Fc2-PNA4 13 III. References 13 Supplementary Material (ESI) for Chemical Communications This journal is (c) The Royal Society of Chemistry 2008 2 I. Experimental Section a) Materials. All chemicals were of reagent grade quality or better, obtained from commercial suppliers and used without further purification. Solvents were used as received or dried over 4 Å molecular sieves. b) Instrumentation and methods. 1H and 13C NMR spectra were recorded in deuterated solvents on a Bruker DRX 400 spectrometer at 30°C. The chemical shifts, δ, are reported in ppm (parts per million). -
Professor of Chemistry
Bruce C. Gibb FRSC Professor of Chemistry Department of Chemistry Tulane University New Orleans, LA 70118, USA Tel: (504) 862 8136 E-mail: [email protected] Website: http://www.gibbgroup.org Twitter: @brucecgibb Research Interests: Aqueous supramolecular chemistry: understanding how molecules interact in water: from specific ion- pairing and the hydrophobic effect, to protein aggregation pertinent to neurodegenerative disorders. Our research has primarily focused on: 1) novel hosts designed to probe the hydrophobic, Hofmeister, and Reverse Hofmeister effects, and; 2) designing supramolecular capsules as yocto-liter reaction vessels and separators. Current efforts to probe the hydrophobic and Hofmeister effects include studies of the supramolecular properties of proteins. Professional Positions: Visiting Professor, Wuhan University of Science and Technology as a Chair Professor of Chutian Scholars Program (2015-2018) Professor of Chemistry, Tulane University, New Orleans, USA (2012-present). University Research Professor, University of New Orleans, USA (2007-2011). Professor of Chemistry, University of New Orleans, USA (2005-2007). Associate Professor of Chemistry, University of New Orleans, USA (2002-2005). Assistant Professor of Chemistry, University of New Orleans, USA, (1996-2002). Education: Postdoctoral Work Department of Chemistry, New York University. Synthesis of Carbonic Anhydrase (CA) mimics with Advisor: Prof. J. W. Canary, (1994-1996). Department of Chemistry, University of British Columbia, Canada De Novo Protein development. Advisor: Prof. J. C. Sherman (1993-1994). Ph.D. Robert Gordon’s University, Aberdeen, UK. Synthesis and Structural Examination of 3a,5-cyclo-5a- Androstane Steroids. Advisors: Dr. Philip J. Cox and Dr. Steven MacManus (1987-92) . B.Sc. with Honors in Physical Sciences Robert Gordon’s University, Aberdeen, UK. -
Transformation of Phenanthrene by Mycobacterium Sp. ELW1 and the Formation of Toxic Metabolites
AN ABSTRACT OF THE THESIS OF Jill E. Schrlau for the degree of Master of Science in Environmental Engineering presented on September 20, 2016. Title: Transformation of Phenanthrene by Mycobacterium sp. ELW1 and the Formation of Toxic Metabolites. Abstract approved: _____________________________________________________________________ Lewis Semprini Staci Simonich The ability of Mycobacterium sp. ELW1, a novel microbe capable of alkene oxidation, to co-metabolize phenanthrene (PHE) was studied. ELW1 was able to completely co-metabolize PHE, at different concentrations below its water solubility limit, in an aqueous environment. The alkene monooxygenases in ELW1, used to initiate oxidation of PHE, were effectively inhibited by 1-octyne despite some PHE transformation observed. PHE metabolites consisted of only hydroxyphenanthrenes (OHPHEs) with trans-9,10-dihydroxy-9,10-dihydrophenanthrene (trans-9,10-PHE), the primary product, comprising more than 90% of the total metabolites formed in both PHE-exposed cells and 1-octyne controls. Mass balance was estimated by summing the zero-order formation rates of OHPHE metabolites and comparing these to the zero-order transformation rates PHE in PHE-exposed cells. The transformation rates of PHE and were in good agreement with the formation rates of the metabolites. PHE transformation followed first-order rates that, when normalized by biomass, were in the range of those estimated by the ratio of the Michaelis-Menten kinetic variables of maximum transformation rate (kmax) to the half-saturation constant (KS). Estimated values for kmax to KS obtained through both non-linear and linearization methods resulted in kmax/KS estimates that were a factor of ~3 lower compared to experimental values. -
Organic Seminar Abstracts
Digitized by the Internet Archive in 2012 with funding from University of Illinois Urbana-Champaign http://archive.org/details/organicsemin1971752univ / a ORGANIC SEMINAR ABSTRACTS 1971-1972 Semester II School of Chemical Sciences Department of Chemistry- University of Illinois Urbana, Illinois 3 SEMINAR TOPICS II Semester 1971-72 Reactions of Alkyl Ethers Involving n- Complexes on a Reaction Pathway 125 Jerome T. Adams New Syntheses of Helicenes 127 Alan Morrice Recent Advances in Drug Detection and Analysis I36 Ronald J. Convers The Structure of Carbonium Ions with Multiple Neighboring Groups 138 William J. Work Recent Reactions of the DMSO-DCC Reagent ll+O James A. Franz Nucleophilic Acylation 1^2 Janet Ollinger The Chemistry of Camptothecin lU^ Dale Pigott Stereoselective Syntheses and Absolute Configuration of Cecropia Juvenile Horomone 1U6 John C. Greenfield Uleine and Related Aspidosperma Alkaloids 155 Glen Tolman Strategies in Oligonucleotide Synthesis 162 Graham Walker Stable Carbocations: C-13 Nuclear Magnetic Resonance Studies 16U Moses W. McMillan Organic Chlorosulfinates 166 Steven W. Moje Recent Advances in the Chemistry of Penicillins and Cephalosporins 168 Ronald Stroshane Cerium (iv) Oxidations 175 William C. Christopfel A New Total Synthesis of Vitamin D 18 William Graham Ketone Transpositions 190 Ann L. Crumrine - 125 - REACTIONS OF ALKYL ETHERS INVOLVING n-COMPLEXES ON A REACTION PATHWAY Reported by Jerome T. Adams February 2k 1972 The n-complex (l) has been described as an intermediate on the reaction pathway for electrophilic aromatic substitution and acid catalyzed rearrange- ment of alkyl aryl ethers along with sigma (2) and pi (3) type intermediates. 1 ' 2 +xR Physical evidence for the existence of n-complexes of alkyl aryl ethers was found in the observation of methyl phenyl ononium ions by nmr 3 and ir observation of n-complexes of anisole with phenol. -
Gfsorganics & Fragrances
Chemicals for Flavors GFSOrganics & Fragrances GFS offers a broad range of specialty organic chemicals Specialized chemistries we as building blocks and intermediates for the manufacture of offer include: flavors and fragrances. • Alkynes Over 5,500 materials, including 1,400 chemicals from natural sources, are used for flavor • Alkynols enhancements and aroma profiles. These aroma chemicals are integral components of • Olefins the continued growth within consumer products and packaged foods. The diversity of products can be attributed to the broad spectrum of organic compounds derived from • Unsaturated Acids esters, aldehydes, lactones, alcohols and several other functional groups. • Unsaturated Esters • DIPPN and other Products GFS Chemicals manufactures a wide range of organic intermediates that have been utilized in a multitude of personal care applications. For example, we support Why GFS? several market leading companies in the manufacture and supply of alkyne based aroma chemicals. • Specialized Chemistries • Tailored Specifications As such, we understand the demanding nature of this fast changing market and are fully • From Grams to Metric Tons equipped to overcome process challenges and manufacture the novel chemical products • Responsive Technical Staff that you need, when you need them. We offer flexible custom manufacturing services to produce high purity products with the assurance of quality and full confidentiality. • Uncompromised Product Quality Our state-of-the-art manufacturing facility, located in Columbus, OH is ISO 9001:2008 certified. As a U.S. based manufacturer we have a proven record of helping you take products from development to commercialization. Our technical sales experts are readily accessible to discuss your project needs and unique product specifications. -
Article Metric to 'Green' Chemistry – Which Are the Best?
View Article Online / Journal Homepage / Table of Contents for this issue Metrics to ‘green’ chemistry—which are the best? David J. C. Constable,a Alan D. Curzonsb and Virginia L. Cunninghama a GlaxoSmithKline Pharmaceuticals, 2200 Renaissance Boulevard, King of Prussia, PA 19406, USA. E-mail: [email protected] b GlaxoSmithKline Pharmaceuticals, Southdownview Way, Worthing, West Sussex, UK BN14 8NQ Received 26th June 2002 First published as an Advance Article on the web 17th October 2002 A considerable amount has been written about the use of metrics to drive business, government and communities towards more sustainable practices. A number of metrics have also been proposed over the past 5U10 years to make chemists aware of the need to change the methods used for chemical syntheses and chemical processes. This paper explores several metrics commonly used by chemists and compares and contrasts these metrics with a new metric known as reaction mass efficiency. The paper also uses an economic analysis of four commercial pharmaceutical processes to understand the relationship between metrics and the most important cost drivers in these processes. Selected metrics used in the past autoclaved cell mass have some environmental impacts of one kind or another that would need to be evaluated and ad- A considerable number of publications have been written about dressed. the use of metrics to drive business, government and commu- nities towards more sustainable practices. The reader is referred elsewhere for a discussion of what metrics have -
Nuclear Spin-Induced Optical Rotation of Functional Groups in Hydrocarbons Petr Štěpánek1 Supplementary Information
Electronic Supplementary Material (ESI) for Physical Chemistry Chemical Physics. This journal is © the Owner Societies 2020 Nuclear spin-induced optical rotation of functional groups in hydrocarbons Petr Štěpánek1 Supplementary Information Contents 1 List of molecules 2 2 Basis set benchmark 5 1 3 Effect of cis/trans isomerism on H NSOR of T1 atom type in alkenes 5 4 Effect of conformation on NSOR 6 5 Extended Figure for NSOR of dienes 7 6 Effect of cis/trans isomerism in dienes 8 7 Supporting data for solvent and geometry effects 8 1NMR Research Unit, Faculty of Science, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland; petr.stepanek@oulu.fi 1 1 List of molecules Tables below list the molecules included in the study. The test cases of the contribution model are not included. Table S 1: Alkane molecules methane 2-methyl-propane 2,3-dimethyl-butane ethane 2-methyl-butane 2,2-dimethyl-propane propane 2-methyl-pentane 2,2-dimethyl-pentane butane 3-methyl-pentane 2,3-dimethyl-pentane pentane 2,2-dimethyl-butane 3,3-dimethyl-pentane hexane Table S 2: Alkene molecules ethene 2,3,3-trimethyl-butene 5-methyl-heptene propene 2,4-dimethyl-pentene 6-methyl-heptene trans-but-2-ene 2-methyl-hexene cis-5,5-dimethyl-hex-2-ene cis-pent-2-ene 3,3-dimethyl-pentene cis-6-methyl-hept-2-ene trans-hex-2-ene 3,4-dimethyl-pentene trans-5,5-dimethyl-hex-2-ene trans-pent-2-ene 3-methyl-hexene trans-6-methyl-hept-2-ene trans-hex-3-ene 4-methyl-hexene 5,6-dimethyl-heptene 2-methyl-propene cis-4,4-dimethyl-pent-2-ene cis-6,6-dimethyl-hepte-2-ene 2-methyl-butene -
Cycloadditions for Rapid, Scalable Access to Alkynylated Polycyclic Aromatic Cite This: Chem
Chemical Science EDGE ARTICLE View Article Online View Journal | View Issue Site-selective [2 + 2 + n] cycloadditions for rapid, scalable access to alkynylated polycyclic aromatic Cite this: Chem. Sci., 2020, 11,3028 hydrocarbons† All publication charges for this article have been paid for by the Royal Society of Chemistry Gavin R. Kiel, Harrison M. Bergman and T. Don Tilley * Polycyclic aromatic hydrocarbons (PAHs) are attractive synthetic building blocks for more complex conjugated nanocarbons, but their use for this purpose requires appreciable quantities of a PAH with reactive functional groups. Despite tremendous recent advances, most synthetic methods cannot satisfy these demands. Here we present a general and scalable [2 + 2 + n](n ¼ 1 or 2) cycloaddition strategy to access PAHs that are decorated with synthetically versatile alkynyl groups and its application to seven structurally diverse PAH ring systems (thirteen new alkynylated PAHs in total). The critical discovery is the site-selectivity of an Ir-catalyzed [2 + 2 + 2] cycloaddition, which preferentially cyclizes tethered diyne units with preservation of other (peripheral) alkynyl groups. The potential for generalization of the site- Creative Commons Attribution-NonCommercial 3.0 Unported Licence. selectivity to other [2 + 2 + n] reactions is demonstrated by identification of a Cp2Zr-mediated [2 + 2 + 1]/metallacycle transfer sequence for synthesis of an alkynylated, selenophene-annulated PAH. The new PAHs are excellent synthons for macrocyclic conjugated nanocarbons. As a proof of concept, four were subjected to alkyne metathesis catalysis to afford large, PAH-containing arylene ethylene macrocycles, which possess a range of cavity sizes reaching well into the nanometer regime. Notably, these high- Received 2nd December 2019 yielding macrocyclizations establish that synthetically convenient pentynyl groups can be effective for Accepted 15th February 2020 metathesis since the 4-octyne byproduct is sequestered by 5 A˚ MS.