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Revision of the Genus Cotylidia (Basidiomycota, Hymenochaetales) in the Czech Republic
CZECH MYCOLOGY 65(1): 1–13, JUNE 10, 2013 (ONLINE VERSION, ISSN 1805-1421) Revision of the genus Cotylidia (Basidiomycota, Hymenochaetales) in the Czech Republic 1 2 JIŘÍ KOUT *, LUCIE ZÍBAROVÁ 1Department of Biology, Geosciences and Environmental Education, Faculty of Education, University of West Bohemia, Klatovská 51, Plzeň, CZ-306 19, Czech Republic; [email protected] 2Department of Botany, Faculty of Natural Sciences, University of South Bohemia, Na Zlaté stoce 1, České Budějovice, CZ-370 05, Czech Republic; [email protected] *corresponding author Kout J., Zíbarová L. (2013): Revision of the genus Cotylidia (Basidiomycota, Hymenochaetales) in the Czech Republic. – Czech Mycol. 65(1): 1–13. To date, three species of the genus Cotylidia have been identified in the Czech Republic: C. muscigena, C. pannosa, and C. undulata. The occurrence of Cotylidia undulata in the Czech Re- public was already confirmed and a new locality is published here. The other two species are newly re- ported from the Czech Republic. The remaining two European Cotylidia species are not yet known from the area studied: C. carpatica and the badly known Mediterranean C. marsicana. Finally one specimen found during the study of herbarium material does not correspond well to any known Euro- pean species. The genus was reviewed based on fresh and herbarium specimens. The species of Cotylidia are described and an identification key is added. All three species are rarely reported fungi. Key words: hymenochaetoid clade, taxonomy, distribution, threatened fungi, Europe. Kout J., Zíbarová L. (2013): Revize rodu lupénka – Cotylidia (Basidiomycota, Hymenochaetales) v České republice. – Czech Mycol. 65(1): 1–13. -
Fungi of the Fortuna Forest Reserve: Taxonomy and Ecology with Emphasis on Ectomycorrhizal Communities
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.16.045724; this version posted April 18, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Fungi of the Fortuna Forest Reserve: Taxonomy and ecology with emphasis on ectomycorrhizal communities Adriana Corrales1 and Clark L. Ovrebo2 1 Department of Biology, Faculty of Natural Sciences, Universidad del Rosario. Bogota, 111221, Colombia. 2 Department of Biology, University of Central Oklahoma. Edmond, OK. USA. ABSTRACT Panamanian montane forests harbor a high diversity of fungi, particularly of ectomycorrhizal (ECM) fungi, however their taxonomy and diversity patterns remain for the most part unexplored. Here we present state of the art fungal taxonomy and diversity patterns at Fortuna Forest Reserve based on morphological and molecular identification of over 1,000 fruiting body collections of macromycetes made over a period of five years. We compare these new results with previously published work based on environmental sampling of Oreomunnea mexicana root tips. We compiled a preliminary list of species and report 22 new genera and 29 new fungal species for Panama. Based on fruiting body collection data we compare the species composition of ECM fungal communities associated with Oreomunnea stands across sites differing in soil fertility and amount of rainfall. We also examine the effect of a long-term nitrogen addition treatment on the fruiting body production of ECM fungi. Finally, we discuss the biogeographic importance of Panama collections which fill in the knowledge gap of ECM fungal records between Costa Rica and Colombia. -
Re-Thinking the Classification of Corticioid Fungi
mycological research 111 (2007) 1040–1063 journal homepage: www.elsevier.com/locate/mycres Re-thinking the classification of corticioid fungi Karl-Henrik LARSSON Go¨teborg University, Department of Plant and Environmental Sciences, Box 461, SE 405 30 Go¨teborg, Sweden article info abstract Article history: Corticioid fungi are basidiomycetes with effused basidiomata, a smooth, merulioid or Received 30 November 2005 hydnoid hymenophore, and holobasidia. These fungi used to be classified as a single Received in revised form family, Corticiaceae, but molecular phylogenetic analyses have shown that corticioid fungi 29 June 2007 are distributed among all major clades within Agaricomycetes. There is a relative consensus Accepted 7 August 2007 concerning the higher order classification of basidiomycetes down to order. This paper Published online 16 August 2007 presents a phylogenetic classification for corticioid fungi at the family level. Fifty putative Corresponding Editor: families were identified from published phylogenies and preliminary analyses of unpub- Scott LaGreca lished sequence data. A dataset with 178 terminal taxa was compiled and subjected to phy- logenetic analyses using MP and Bayesian inference. From the analyses, 41 strongly Keywords: supported and three unsupported clades were identified. These clades are treated as fam- Agaricomycetes ilies in a Linnean hierarchical classification and each family is briefly described. Three ad- Basidiomycota ditional families not covered by the phylogenetic analyses are also included in the Molecular systematics classification. All accepted corticioid genera are either referred to one of the families or Phylogeny listed as incertae sedis. Taxonomy ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Introduction develop a downward-facing basidioma. -
Welsh Dune Fungi: Data Collation, Evaluation and Conservation Priorities
Welsh Dune Fungi: Data Collation, Evaluation and Conservation Priorities S.E. Evans & P.J. Roberts Evidence Report No 134 About Natural Resources Wales Natural Resources Wales is the organisation responsible for the work carried out by the three former organisations, the Countryside Council for Wales, Environment Agency Wales and Forestry Commission Wales. It is also responsible for some functions previously undertaken by Welsh Government. Our purpose is to ensure that the natural resources of Wales are sustainably maintained, used and enhanced, now and in the future. We work for the communities of Wales to protect people and their homes as much as possible from environmental incidents like flooding and pollution. We provide opportunities for people to learn, use and benefit from Wales' natural resources. We work to support Wales' economy by enabling the sustainable use of natural resources to support jobs and enterprise. We help businesses and developers to understand and consider environmental limits when they make important decisions. We work to maintain and improve the quality of the environment for everyone and we work towards making the environment and our natural resources more resilient to climate change and other pressures. Page 2 of 57 www.naturalresourceswales.gov.uk Evidence at Natural Resources Wales Natural Resources Wales is an evidence based organisation. We seek to ensure that our strategy, decisions, operations and advice to Welsh Government and others are underpinned by sound and quality-assured evidence. We recognise that it is critically important to have a good understanding of our changing environment. We will realise this vision by: Maintaining and developing the technical specialist skills of our staff; Securing our data and information; Having a well resourced proactive programme of evidence work; Continuing to review and add to our evidence to ensure it is fit for the challenges facing us; and Communicating our evidence in an open and transparent way. -
Polyporales, Basidiomycota), a New Polypore Species and Genus from Finland
Ann. Bot. Fennici 54: 159–167 ISSN 0003-3847 (print) ISSN 1797-2442 (online) Helsinki 18 April 2017 © Finnish Zoological and Botanical Publishing Board 2017 Caudicicola gracilis (Polyporales, Basidiomycota), a new polypore species and genus from Finland Heikki Kotiranta1,*, Matti Kulju2 & Otto Miettinen3 1) Finnish Environment Institute, Natural Environment Centre, P.O. Box 140, FI-00251 Helsinki, Finland (*corresponding author’s e-mail: [email protected]) 2) Biodiversity Unit, P.O. Box 3000, FI-90014 University of Oulu, Finland 3) Finnish Museum of Natural History, Botanical Museum, P.O. Box 7, FI-00014 University of Helsinki, Finland Received 10 Jan. 2017, final version received 23 Mar. 2017, accepted 27 Mar. 2017 Kotiranta H., Kulju M. & Miettinen O. 2017: Caudicicola gracilis (Polyporales, Basidiomycota), a new polypore species and genus from Finland. — Ann. Bot. Fennici 54: 159–167. A new monotypic polypore genus, Caudicicola Miettinen, Kotir. & Kulju, is described for the new species C. gracilis Kotir., Kulju & Miettinen. The species was collected in central Finland from Picea abies and Pinus sylvestris stumps, where it grew on undersides of stumps and roots. Caudicicola gracilis is characterized by very fragile basidiocarps, monomitic hyphal structure with clamps, short and wide tramal cells, smooth ellipsoid spores, basidia with long sterigmata and conidiogenous areas in the margins of the basidiocarp producing verrucose, slightly thick-walled conidia. The genus belongs to the residual polyporoid clade of the Polyporales in the vicinity of Steccherinaceae, but has no known close relatives. Introduction sis taxicola, Pycnoporellus fulgens and its suc- cessional predecessor Fomitopsis pinicola, and The species described here was found when deciduous tree trunks had such seldom collected Heino Kulju, the brother of the second author, species as Athelopsis glaucina (on Salix) and was making a forest road for tractors. -
A New Morphological Arrangement of the Polyporales. I
A new morphological arrangement of the Polyporales. I. Phanerochaetineae © Ivan V. Zmitrovich, Vera F. Malysheva,* Wjacheslav A. Spirin** V.L. Komarov Botanical Institute RAS, Prof. Popov str. 2, 197376, St-Petersburg, Russia e-mail: [email protected], *[email protected], **[email protected] Zmitrovich I.V., Malysheva V.F., Spirin W.A. A new morphological arrangement of the Polypo- rales. I. Phanerochaetineae. Mycena. 2006. Vol. 6. P. 4–56. UDC 582.287.23:001.4. SUMMARY: A new taxonomic division of the suborder Phanerochaetineae of the order Polyporales is presented. The suborder covers five families, i.e. Faerberiaceae Pouzar, Fistuli- naceae Lotsy (including Jülich’s Bjerkanderaceae, Grifolaceae, Hapalopilaceae, and Meripi- laceae), Laetiporaceae Jülich (=Phaeolaceae Jülich), and Phanerochaetaceae Jülich. As a basis of the suggested subdivision, features of basidioma micromorphology are regarded, with special attention to hypha/epibasidium ratio. Some generic concepts are changed. New genera Raduliporus Spirin & Zmitr. (type Polyporus aneirinus Sommerf. : Fr.), Emmia Zmitr., Spirin & V. Malysheva (type Polyporus latemarginatus Dur. & Mont.), and Leptochaete Zmitr. & Spirin (type Thelephora sanguinea Fr. : Fr.) are described. The genus Byssomerulius Parmasto is proposed to be conserved versus Dictyonema C. Ag. The genera Abortiporus Murrill and Bjer- kandera P. Karst. are reduced to Grifola Gray. In total, 69 new combinations are proposed. The species Emmia metamorphosa (Fuckel) Spirin, Zmitr. & Malysheva (commonly known as Ceri- poria metamorphosa (Fuckel) Ryvarden & Gilb.) is reported as new to Russia. Key words: aphyllophoroid fungi, corticioid fungi, Dictyonema, Fistulinaceae, homo- basidiomycetes, Laetiporaceae, merulioid fungi, Phanerochaetaceae, phylogeny, systematics I. INTRODUCTORY NOTES There is no general agreement how to outline the limits of the forms which should be called phanerochaetoid fungi. -
Diversity of Mushrooms at Mu Ko Chang National Park, Trat Province
Proceedings of International Conference on Biodiversity: IBD2019 (2019); 21 - 32 Diversity of mushrooms at Mu Ko Chang National Park, Trat Province Baramee Sakolrak*, Panrada Jangsantear, Winanda Himaman, Tiplada Tongtapao, Chanjira Ayawong and Kittima Duengkae Forest and Plant Conservation Research Office, Department of National Parks, Wildlife and Plant Conservation, Chatuchak District, Bangkok, Thailand *Corresponding author e-mail: [email protected] Abstract: Diversity of mushrooms at Mu Ko Chang National Park was carried out by surveying the mushrooms along natural trails inside the national park. During December 2017 to August 2018, a total of 246 samples were classified to 2 phyla Fungi; Ascomycota and Basidiomycota. These mushrooms were revealed into 203 species based on their morphological characteristic. They were classified into species level (78 species), generic level (103 species) and unidentified (22 species). All of them were divided into 4 groups according to their ecological roles in the forest ecosystem, namely, saprophytic mushrooms 138 species (67.98%), ectomycorrhizal mushrooms 51 species (25.12%), plant parasitic mushrooms 6 species (2.96%) termite mushroom 1 species (0.49%). Six species (2.96%) were unknown ecological roles and 1 species as Boletellus emodensis (Berk.) Singer are both of the ectomycorrhizal and plant parasitic mushroom. The edibility of these mushrooms were edible (29 species), inedible (8 species) and unknown edibility (166 species). Eleven medicinal mushroom species were recorded in this study. The most interesting result is Spongiforma thailandica Desjardin, et al. has been found, the first report found after the first discovery in 2009 at Khao Yai National Park by E. Horak, et al. Keywords: Species list, ecological roles, edibility, protected area, Spongiforma thailandica Introduction Mushroom is a group of fungi which has the reproductive part known as the fruit body or fruiting body and develops to form and distribute the spores. -
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North American Fungi Volume 7, Number 1, Pages 1-9 Published May 15, 2012 Tsugacorticium kenaicum (Hymenochaetales, Basidiomycota), a new corticioid genus and species from Alaska Karen K. Nakasone and Harold H. Burdsall, Jr. Center for Forest Mycology Research, Northern Research Station, U.S. Forest Service, One Gifford Pinchot Drive, Madison, Wisconsin USA 53726-2398 Nakasone, K. K., and H. H. Burdsall, Jr. 2012. Tsugacorticium kenaicum (Hymenochaetales, Basidiomycota), a new corticioid genus and species from Alaska. North American Fungi 7(1): 1-9. doi: http://dx.doi: 10.2509/naf2012.007.001 Corresponding author: Karen K. Nakasone, [email protected]. Accepted for publication: April 26, 2012. http://pnwfungi.org Copyright © 2012Pacific Northwest Fungi Project. All rights reserved. Abstract: The new corticioid genus and species, Tsugacorticium kenaicum from Alaska, is described. Primarily found on attached, dead, corticate branches of mountain hemlock in the Kenai Peninsula, T. kenaicum is characterized by small, soft, white to yellow basidiomata, thickened subhymenium, much branched dendrohyphidia, and small globose to subglobose basidiospores. Although morphologically similar to Dendrothele (Agaricales) and Dendrocorticium (Corticiales), phylogenetic analyses of the nuclear large subunit ribosomal RNA gene place this taxon in the Rickenellaceae clade in the Hymenochaetales. Tsugacorticium kenaicum is described, illustrated, and compared to morphologically similar and phylogenetically related taxa. Key words: Hymenochaetales, dendrohyphidia, suburniform basidia, Tsuga mertensiana 2 Nakasone & Burdsall. Tsugacorticium kenaicum from Alaska. North American Fungi 7(1): 1-9 Introduction: There are over 250 species of gene were obtained from Genbank. Current wood-inhabiting fungi reported from Alaska. The names used in the phylogenetic tree shown in majority of the species are basidiomycetes, but Figure 1 are in boldface type, followed by the ascomycetes and slime molds are represented name from Genbank, if different, and Genbank also (Laursen et. -
Macrofungos Agaricomycetes (Basidiomycota) Não Poróides Da Região Amazônica Incorporada À Coleção De Fungos Lignocelulolíticos/INPA
Oliveira, L.A.; Fernandes, O.C.; Jesus, M.A.;Bentes, J.L.S.; Andrade, S.L.; Souza, A.Q.L.; Santos, C. Diversidade Microbiana da Amazônia 2015. Editora INPA. Macrofungos Agaricomycetes (Basidiomycota) não poróides da região Amazônica incorporada à Coleção de Fungos Lignocelulolíticos/INPA 1 1 Couceiro, DM ; Jesus MA 1 Instituto Nacional de Pesquisas da Amazônia – INPA, Manaus –AM. E-mail: [email protected], [email protected] Resumo Os macrofungos não poróides, abriga espécies de fungos raramente estudadas. O objetivo deste estudo é identificar o acervo de macrofungos não poróides depositados na Coleção de Fungos Lignocelulolíticos/INPA. Os fungos são provenientes da Estação Ecológica de Maracá e Parque Nacional do Viruá, ambos localizados no Estado de Roraima e Reserva Biológica do Uatumã e, Campus do Instituto Nacional de Pesquisas da Amazônia/INPA e da Estação Experimental de Sivilcultura Tropical- ZF2/INPA e Área Urbana de Manaus, todos localizados no Estado do Amazonas. Os espécimes dos macrofungos não poróides foram identificadas e distribuídas em 5 famílias, 7 gêneros e 9 espécies: Aquascypha hydrophora, Caripia montagnei, Cotylidia aurantiaca, Cymatoderma caperatum, C. elegans, Inflatostereum glabrum, Stereopsis hiscens var. macrospora, Stereum hirsutum e S. ostrea. C. aurantiaca e I. glabrum são de primeira ocorrência para o Estado de Roraima. O estudo possibilitou conhecimento de espécies Agaricomycetes não poróides da região Amazônica, contribuindo com a ocorrência e distribuição em áreas florestais de ambos Estados Amazonas e Roraima. Palavras-chaves: Amazônia, Micobiota, Não poróide, Podridão branca. Introdução Reid em 1965 propôs uma nova família para fungos não poróides (Aphyllophorales) (Talbot, 1973). Nesta proposta, as espécies de Stereaceae descritas por Tabolt (1973) foram incluídas, de modo que os representantes dos macrofungos (Podoscyphaceae) foram classificados como polifiléticos (Reid, 1965). -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
Molecular Phylogeny of Polyporales from Bafut Forest, Cameroon and Their Importance to Rural Communities
Journal of Biology and Life Science ISSN 2157-6076 2019, Vol. 10, No. 2 Molecular Phylogeny of Polyporales from Bafut Forest, Cameroon and Their Importance to Rural Communities Tonjock Rosemary Kinge (Corresponding author) Department of Biological Sciences, Faculty of Science, The University of Bamenda, P.O. Box 39, Bambili, North West Region, Cameroon Email: [email protected] Azinue Clementine Lem Department of Biological Sciences, Faculty of Science, The University of Bamenda, P.O. Box 39, Bambili, North West Region, Cameroon Email: [email protected] Seino Richard Akwanjoh Department of Biological Sciences, Faculty of Science, The University of Bamenda, P.O. Box 39, Bambili, North West Region, Cameroon Email: [email protected] Received: January 9, 2019 Accepted: January 26, 2019 doi:10.5296/jbls.v10i2.14339 URL: https://doi.org/10.5296/jbls.v10i2.14339 Abstract The polyporales are a large order of pore fungi within the Basidiomycota (Kingdom Fungi). They are mostly found on decay wood with some edible and medicinal species and others causing diseases of trees. In Cameroon, the knowledge on the phylogeny of polyporales is limited, their historical uses as food, medicine, source of income and the sociological impacts are apparently threatened due to slow ethnomycology research drive. The aim of this study was to identify and determine the phylogenetic relationship of polyporales in the Bafut forest and document its uses to the local communities. DNA was extracted using CTAB method and amplified using primers ITS 1 and ITS4. Their identities were determined in GeneBank using BLAST and a phylogenetic analysis was done using MEGA version 7. -
A Revised Family-Level Classification of the Polyporales (Basidiomycota)
fungal biology 121 (2017) 798e824 journal homepage: www.elsevier.com/locate/funbio A revised family-level classification of the Polyporales (Basidiomycota) Alfredo JUSTOa,*, Otto MIETTINENb, Dimitrios FLOUDASc, € Beatriz ORTIZ-SANTANAd, Elisabet SJOKVISTe, Daniel LINDNERd, d €b f Karen NAKASONE , Tuomo NIEMELA , Karl-Henrik LARSSON , Leif RYVARDENg, David S. HIBBETTa aDepartment of Biology, Clark University, 950 Main St, Worcester, 01610, MA, USA bBotanical Museum, University of Helsinki, PO Box 7, 00014, Helsinki, Finland cDepartment of Biology, Microbial Ecology Group, Lund University, Ecology Building, SE-223 62, Lund, Sweden dCenter for Forest Mycology Research, US Forest Service, Northern Research Station, One Gifford Pinchot Drive, Madison, 53726, WI, USA eScotland’s Rural College, Edinburgh Campus, King’s Buildings, West Mains Road, Edinburgh, EH9 3JG, UK fNatural History Museum, University of Oslo, PO Box 1172, Blindern, NO 0318, Oslo, Norway gInstitute of Biological Sciences, University of Oslo, PO Box 1066, Blindern, N-0316, Oslo, Norway article info abstract Article history: Polyporales is strongly supported as a clade of Agaricomycetes, but the lack of a consensus Received 21 April 2017 higher-level classification within the group is a barrier to further taxonomic revision. We Accepted 30 May 2017 amplified nrLSU, nrITS, and rpb1 genes across the Polyporales, with a special focus on the Available online 16 June 2017 latter. We combined the new sequences with molecular data generated during the Poly- Corresponding Editor: PEET project and performed Maximum Likelihood and Bayesian phylogenetic analyses. Ursula Peintner Analyses of our final 3-gene dataset (292 Polyporales taxa) provide a phylogenetic overview of the order that we translate here into a formal family-level classification.