SRS News No. 87: Spring 2017
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Untangling Taxonomy: a DNA Barcode Reference Library for Canadian Spiders
Molecular Ecology Resources (2016) 16, 325–341 doi: 10.1111/1755-0998.12444 Untangling taxonomy: a DNA barcode reference library for Canadian spiders GERGIN A. BLAGOEV, JEREMY R. DEWAARD, SUJEEVAN RATNASINGHAM, STEPHANIE L. DEWAARD, LIUQIONG LU, JAMES ROBERTSON, ANGELA C. TELFER and PAUL D. N. HEBERT Biodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada Abstract Approximately 1460 species of spiders have been reported from Canada, 3% of the global fauna. This study provides a DNA barcode reference library for 1018 of these species based upon the analysis of more than 30 000 specimens. The sequence results show a clear barcode gap in most cases with a mean intraspecific divergence of 0.78% vs. a min- imum nearest-neighbour (NN) distance averaging 7.85%. The sequences were assigned to 1359 Barcode index num- bers (BINs) with 1344 of these BINs composed of specimens belonging to a single currently recognized species. There was a perfect correspondence between BIN membership and a known species in 795 cases, while another 197 species were assigned to two or more BINs (556 in total). A few other species (26) were involved in BIN merges or in a combination of merges and splits. There was only a weak relationship between the number of specimens analysed for a species and its BIN count. However, three species were clear outliers with their specimens being placed in 11– 22 BINs. Although all BIN splits need further study to clarify the taxonomic status of the entities involved, DNA bar- codes discriminated 98% of the 1018 species. The present survey conservatively revealed 16 species new to science, 52 species new to Canada and major range extensions for 426 species. -
Effects of Climate Change on Arctic Arthropod Assemblages and Distribution Phd Thesis
Effects of climate change on Arctic arthropod assemblages and distribution PhD thesis Rikke Reisner Hansen Academic advisors: Main supervisor Toke Thomas Høye and co-supervisor Signe Normand Submitted 29/08/2016 Data sheet Title: Effects of climate change on Arctic arthropod assemblages and distribution Author University: Aarhus University Publisher: Aarhus University – Denmark URL: www.au.dk Supervisors: Assessment committee: Arctic arthropods, climate change, community composition, distribution, diversity, life history traits, monitoring, species richness, spatial variation, temporal variation Date of publication: August 2016 Please cite as: Hansen, R. R. (2016) Effects of climate change on Arctic arthropod assemblages and distribution. PhD thesis, Aarhus University, Denmark, 144 pp. Keywords: Number of pages: 144 PREFACE………………………………………………………………………………………..5 LIST OF PAPERS……………………………………………………………………………….6 ACKNOWLEDGEMENTS……………………………………………………………………...7 SUMMARY……………………………………………………………………………………...8 RESUMÉ (Danish summary)…………………………………………………………………....9 SYNOPSIS……………………………………………………………………………………....10 Introduction……………………………………………………………………………………...10 Study sites and approaches……………………………………………………………………...11 Arctic arthropod community composition…………………………………………………….....13 Potential climate change effects on arthropod composition…………………………………….15 Arctic arthropod responses to climate change…………………………………………………..16 Future recommendations and perspectives……………………………………………………...20 References………………………………………………………………………………………..21 PAPER I: High spatial -
Spiders (Araneae) of Churchill, Manitoba: DNA Barcodes And
Blagoev et al. BMC Ecology 2013, 13:44 http://www.biomedcentral.com/1472-6785/13/44 RESEARCH ARTICLE Open Access Spiders (Araneae) of Churchill, Manitoba: DNA barcodes and morphology reveal high species diversity and new Canadian records Gergin A Blagoev1*, Nadya I Nikolova1, Crystal N Sobel1, Paul DN Hebert1,2 and Sarah J Adamowicz1,2 Abstract Background: Arctic ecosystems, especially those near transition zones, are expected to be strongly impacted by climate change. Because it is positioned on the ecotone between tundra and boreal forest, the Churchill area is a strategic locality for the analysis of shifts in faunal composition. This fact has motivated the effort to develop a comprehensive biodiversity inventory for the Churchill region by coupling DNA barcoding with morphological studies. The present study represents one element of this effort; it focuses on analysis of the spider fauna at Churchill. Results: 198 species were detected among 2704 spiders analyzed, tripling the count for the Churchill region. Estimates of overall diversity suggest that another 10–20 species await detection. Most species displayed little intraspecific sequence variation (maximum <1%) in the barcode region of the cytochrome c oxidase subunit I (COI) gene, but four species showed considerably higher values (maximum = 4.1-6.2%), suggesting cryptic species. All recognized species possessed a distinct haplotype array at COI with nearest-neighbour interspecific distances averaging 8.57%. Three species new to Canada were detected: Robertus lyrifer (Theridiidae), Baryphyma trifrons (Linyphiidae), and Satilatlas monticola (Linyphiidae). The first two species may represent human-mediated introductions linked to the port in Churchill, but the other species represents a range extension from the USA. -
Trail and Fell Running
Trail and Fell Running in the Yorkshire Dales Trail and Fell Running in the About the Author Pete Ellwood is an experienced fell runner, running and racing in the hills for over thirty years. He has lived Yorkshire Dales in the north all his life and, since his teenage years, has attempted to spend every possible waking hour on the hills and mountains. Pete holds a long service award for volunteering as a member of a mountain rescue team, 40 runs and he completed the Munros in 2003. He regularly com- petes in fell races and mountain marathons in the North in the National Park, of England and Scotland, winning a class of the Saunders Lakeland Mountain Marathon in 2013. including the Three Peaks Pete lives on the edge of the Yorkshire Dales with his wife, two boys and a daily view of Ingleborough to keep by Pete Ellwood him company. Juniper House, Murley Moss, Oxenholme Road, Kendal, Cumbria LA9 7RL www.cicerone.co.uk © Pete Ellwood 2019 Register your book: To sign up to receive free updates, special offers First edition 2019 and GPX files where available, register Contents ISBN: 978 1 85284 922 1 your book at www.cicerone.co.uk. Map key ................................................................7 Printed by KHL Printing, Singapore Acknowledgements Overview map ..........................................................8 A catalogue record for this book is Route summary table ....................................................9 This book would not have been possible available from the British Library. without the help and support of a large ULTRA ................................................................15 © Crown copyright 2019 number of people. I would like to take OS PU100012932 this opportunity to thank all the Settle Harriers who checked routes and posed The Yorkshire Dales ....................................................... -
196 Arachnology (2019)18 (3), 196–212 a Revised Checklist of the Spiders of Great Britain Methods and Ireland Selection Criteria and Lists
196 Arachnology (2019)18 (3), 196–212 A revised checklist of the spiders of Great Britain Methods and Ireland Selection criteria and lists Alastair Lavery The checklist has two main sections; List A contains all Burach, Carnbo, species proved or suspected to be established and List B Kinross, KY13 0NX species recorded only in specific circumstances. email: [email protected] The criterion for inclusion in list A is evidence that self- sustaining populations of the species are established within Great Britain and Ireland. This is taken to include records Abstract from the same site over a number of years or from a number A revised checklist of spider species found in Great Britain and of sites. Species not recorded after 1919, one hundred years Ireland is presented together with their national distributions, before the publication of this list, are not included, though national and international conservation statuses and syn- this has not been applied strictly for Irish species because of onymies. The list allows users to access the sources most often substantially lower recording levels. used in studying spiders on the archipelago. The list does not differentiate between species naturally Keywords: Araneae • Europe occurring and those that have established with human assis- tance; in practice this can be very difficult to determine. Introduction List A: species established in natural or semi-natural A checklist can have multiple purposes. Its primary pur- habitats pose is to provide an up-to-date list of the species found in the geographical area and, as in this case, to major divisions The main species list, List A1, includes all species found within that area. -
SA Spider Checklist
REVIEW ZOOS' PRINT JOURNAL 22(2): 2551-2597 CHECKLIST OF SPIDERS (ARACHNIDA: ARANEAE) OF SOUTH ASIA INCLUDING THE 2006 UPDATE OF INDIAN SPIDER CHECKLIST Manju Siliwal 1 and Sanjay Molur 2,3 1,2 Wildlife Information & Liaison Development (WILD) Society, 3 Zoo Outreach Organisation (ZOO) 29-1, Bharathi Colony, Peelamedu, Coimbatore, Tamil Nadu 641004, India Email: 1 [email protected]; 3 [email protected] ABSTRACT Thesaurus, (Vol. 1) in 1734 (Smith, 2001). Most of the spiders After one year since publication of the Indian Checklist, this is described during the British period from South Asia were by an attempt to provide a comprehensive checklist of spiders of foreigners based on the specimens deposited in different South Asia with eight countries - Afghanistan, Bangladesh, Bhutan, India, Maldives, Nepal, Pakistan and Sri Lanka. The European Museums. Indian checklist is also updated for 2006. The South Asian While the Indian checklist (Siliwal et al., 2005) is more spider list is also compiled following The World Spider Catalog accurate, the South Asian spider checklist is not critically by Platnick and other peer-reviewed publications since the last scrutinized due to lack of complete literature, but it gives an update. In total, 2299 species of spiders in 67 families have overview of species found in various South Asian countries, been reported from South Asia. There are 39 species included in this regions checklist that are not listed in the World Catalog gives the endemism of species and forms a basis for careful of Spiders. Taxonomic verification is recommended for 51 species. and participatory work by arachnologists in the region. -
WO 2017/035099 Al 2 March 2017 (02.03.2017) P O P C T
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2017/035099 Al 2 March 2017 (02.03.2017) P O P C T (51) International Patent Classification: BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, C07C 39/00 (2006.01) C07D 303/32 (2006.01) DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, C07C 49/242 (2006.01) HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, MG, (21) International Application Number: MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, OM, PCT/US20 16/048092 PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, (22) International Filing Date: SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, 22 August 2016 (22.08.2016) TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW. (25) Filing Language: English (84) Designated States (unless otherwise indicated, for every kind of regional protection available): ARIPO (BW, GH, (26) Publication Language: English GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, (30) Priority Data: TZ, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, 62/208,662 22 August 2015 (22.08.2015) US TJ, TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, DK, EE, ES, FI, FR, GB, GR, HR, HU, IE, IS, IT, LT, LU, (71) Applicant: NEOZYME INTERNATIONAL, INC. -
Arachnologische Arachnology
Arachnologische Gesellschaft E u Arachnology 2015 o 24.-28.8.2015 Brno, p Czech Republic e www.european-arachnology.org a n Arachnologische Mitteilungen Arachnology Letters Heft / Volume 51 Karlsruhe, April 2016 ISSN 1018-4171 (Druck), 2199-7233 (Online) www.AraGes.de/aramit Arachnologische Mitteilungen veröffentlichen Arbeiten zur Faunistik, Ökologie und Taxonomie von Spinnentieren (außer Acari). Publi- ziert werden Artikel in Deutsch oder Englisch nach Begutachtung, online und gedruckt. Mitgliedschaft in der Arachnologischen Gesellschaft beinhaltet den Bezug der Hefte. Autoren zahlen keine Druckgebühren. Inhalte werden unter der freien internationalen Lizenz Creative Commons 4.0 veröffentlicht. Arachnology Logo: P. Jäger, K. Rehbinder Letters Publiziert von / Published by is a peer-reviewed, open-access, online and print, rapidly produced journal focusing on faunistics, ecology Arachnologische and taxonomy of Arachnida (excl. Acari). German and English manuscripts are equally welcome. Members Gesellschaft e.V. of Arachnologische Gesellschaft receive the printed issues. There are no page charges. URL: http://www.AraGes.de Arachnology Letters is licensed under a Creative Commons Attribution 4.0 International License. Autorenhinweise / Author guidelines www.AraGes.de/aramit/ Schriftleitung / Editors Theo Blick, Senckenberg Research Institute, Senckenberganlage 25, D-60325 Frankfurt/M. and Callistus, Gemeinschaft für Zoologische & Ökologische Untersuchungen, D-95503 Hummeltal; E-Mail: [email protected], [email protected] Sascha -
Untangling Taxonomy: a DNA Barcode Reference Library for Canadian Spiders
Received Date : 14-Mar-2015 Revised Date : 30-Jun-2015 Accepted Date : 06-Jul-2015 Article type : Resource Article Untangling Taxonomy: A DNA Barcode Reference Library for Canadian Spiders Gergin A. Blagoev Jeremy R. deWaard* Sujeevan Ratnasingham Article Stephanie L. deWaard Liuqiong Lu James Robertson Angela C. Telfer Paul D. N. Hebert Biodiversity Institute of Ontario, University of Guelph, Guelph, ON, Canada * Corresponding author E-mail: [email protected] This article has been accepted for publication and undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. Please cite this article as doi: Accepted 10.1111/1755-0998.12444 This article is protected by copyright. All rights reserved. Keywords: DNA barcoding, spiders, Araneae, species identification, Barcode Index Numbers, Operational Taxonomic Units Abstract Approximately 1460 species of spiders have been reported from Canada, 3% of the global fauna. This study provides a DNA barcode reference library for 1018 of these species based upon the analysis of more than 30,000 specimens. The sequence results show a clear barcode gap in most cases with a mean intraspecific divergence of 0.78% versus a minimum nearest-neighbour (NN) distance averaging 7.85%. The sequences were assigned to 1359 Barcode Index Numbers (BINs) with 1344 of these BINs composed of specimens belonging to a single currently recognized Article species. There was a perfect correspondence between BIN membership and a known species in 795 cases while another 197 species were assigned to two or more BINs (556 in total). -
IBEITR.ARANEOL.,L(2004)
I BEITR.ARANEOL.,l(2004) I PART 111 a (TEil 111 a) - Descriptions of selected taxa THE FOSSil MYGAlOMORPH SPIDERS (ARANEAE) IN BAl TIC AND DOMINICAN AMBER AND ABOUT EXTANT MEMBERS OF THE FAMllY MICROMYGALIDAE J. WUNDERLICH, 75334 Straubenhardt, Germany. Abstract: The fossil mygalomorph spiders (Araneae: Mygalomorpha) in Baltic and Do- minican amber are listed, a key to the taxa is given. Two species of the genus Ummidia THORELL 1875 (Ctenizidae: Pachylomerinae) in Baltic amber are redescribed, Clos- thes priscus MENGE 1869 (Dipluridae) from Baltic amber is revised, two gen. indet. (Dipluridae) fram Baltic amber are reported. The first fossil member of the family Micro- stigmatidae: Parvomygale n. gen., Parvomygale distineta n. sp. (Parvomygalinae n. subfarn.) in Dominican amber is described. - The taxon Micramygalinae PLATNICK & FORSTER 1982 is raised to family rank, revised diagnoses of the families Micromyga- lidae (no fossil record) and Micrastigmatidae are given. Material: CJW = collection J. WUNDERLICH, GPIUH = Geological and Palaeontologi- cal Institute of the University Hamburg, IMGPUG = Institute and Museum for Geology and Paleontology of the Georg-August-University Goettingen in Germany. 595 ---~-~-~~~--~~--~-'----------~--------~-~~~=-~~--.., INTRODUCTION The first fossil member of the suborder Mygalomorpha (= Orthognatha) in Baltic amber has been described by MENGE 1869 as Glostes priscus (figs. 1-2; comp. the book of WUNDERLICH (1986: Fig. 291)). This spider is a member of the family Dipluridae (Funnelweb Mygalomorphs) and is redescribed in this paper; only juveniles are known. Two further species of Mygalomorpha are described from this kind of amber, these are members of the family Ctenizidae (Trapdoor spiders). - Fossil members of the Mygalo- morphae in Dominican amber were described by WUNDERLICH (1988). -
Dynamics and Phenology of Ballooning Spiders in an Agricultural Landscape of Western Switzerland
Departement of Biology University of Fribourg (Switzerland) Dynamics and phenology of ballooning spiders in an agricultural landscape of Western Switzerland THESIS Presented to the Faculty of Science of the University of Fribourg (Switzerland) in consideration for the award of the academic grade of Doctor rerum naturalium by Gilles Blandenier from Villiers (NE, Switzerland) Dissertation No 1840 UniPrint 2014 Accepted by the Faculty of Science of the Universtiy of Fribourg (Switzerland) upon the recommendation of Prof. Dr. Christian Lexer (University of Fribourg) and Prof. Dr. Søren Toft (University of Aarhus, Denmark), and the President of the Jury Prof. Simon Sprecher (University of Fribourg). Fribourg, 20.05.2014 Thesis supervisor The Dean Prof. Louis-Félix Bersier Prof. Fritz Müller Contents Summary / Résumé ........................................................................................................................................................................................................................ 1 Chapter 1 General Introduction ..................................................................................................................................................................................... 5 Chapter 2 Ballooning of spiders (Araneae) in Switzerland: general results from an eleven-years survey ............................................................................................................................................................................ 11 Chapter 3 Are phenological -
Wensleydale Yorkshire Dales National Park - Landscape Character Assessment YORKSHIRE DALES NATIONAL PARK LANDSCAPE CHARACTER ASSESSMENT LANDSCAPE CHARACTER AREAS 2
1 ‘The Knolls’ and Stag Fell, looking NE from NE from looking Fell, and Stag ‘The Knolls’ of Hawes east the A684 just LCA 18 Wensleydale Yorkshire Dales National Park - Landscape Character Assessment YORKSHIRE DALES NATIONAL PARK LANDSCAPE CHARACTER ASSESSMENT LANDSCAPE CHARACTER AREAS 2 LCA 18 Wensleydale Key characteristics • Broad, open U-shaped glacial valley with a grand scale. • Valley sides are unevenly stepped with sloping bands of outcropping rock, often combined with strips of woodland and screes. Limestone scars are visually important focal points, highly visible due to lack of vegetation cover. • Series of steep flat-topped summits, such as Penhill, Addlebrough and Wether Fell are prominent landmarks at the entrance to tributary valleys, often framing views along the dale Numbered photographs illustrate specific key natural, cultural and perceptual features in Wensleydale (see page 8) • Glacial features such as drift tails, moraines and drumlins form a rolling, undulating valley floor. • River Ure is broad and gently meandering with a stony channel and low grassy banks, generally hidden by undulating 1 landform. • Tributary valleys branch from the main dale, each with a distinct local character (Widdale, Sleddale, Raydale, Cotterdale, Bishopdale, Waldendale, Coverdale). • Numerous waterfalls, formed by alternating beds of hard limestone and sandstone within the soft shales. eg Landscape context Hardraw Force, Mill Gill Force, Whitfield Force and Aysgarth Falls; smaller rocky gills and waterfalls on tributaries and valley slopes The primary influence on the landscapes of Wensleydale is the rocks of the Yoredale series which here lie on top • Well settled, with clustered market towns and villages and many small linear settlements, strung out along minor of the Great Scar Limestone.