Laboratorians Working with Infectious Agents Are Subject to Laboratory-Acquired
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Meningitis Manual Text
Laboratory Methods for the Diagnosis of MENINGITIS Caused by Neisseria meningitidis, Streptococcus pneumoniae, and Haemophilus influenzae Centers for Disease Control and Prevention August, 1998 Laboratory Methods for the Diagnosis of Meningitis Caused by Neisseria meningitidis, Streptococcus pneumoniae, and Haemophilus influenzae Table of Contents Introduction………………………………………………………………………………… 1 Acknowledgments ……………………………………………………………………….. 2 I. Epidemiology of Meningitis Caused by Neisseria meningitidis, Haemophilus influenzae and Streptococcus pneumoniae,…………………………………………… 3 II. General Considerations ......................................................................................................... 5 A. Record Keeping ................................................................................................................... 5 III. Collection and Transport of Clinical Specimens ................................................................... 6 A. Collection of Cerebrospinal Fluid (CSF)............................................................................... 6 A1. Lumbar Puncture ................................................................................................... 6 B. Collection of Blood .............................................................................................................. 7 B1. Precautions ............................................................................................................ 7 B2. Sensitivity of Blood Cultures ................................................................................ -
Identification of Strains Isolated in Thailand and Assigned to the Genera Kozakia and Swaminathania
JOURNAL OF CULTURE COLLECTIONS Volume 6, 2008-2009, pp. 61-68 IDENTIFICATION OF STRAINS ISOLATED IN THAILAND AND ASSIGNED TO THE GENERA KOZAKIA AND SWAMINATHANIA Jintana Kommanee1, Somboon Tanasupawat1,*, Ancharida Akaracharanya2, Taweesak Malimas3, Pattaraporn Yukphan3, Yuki Muramatsu4, Yasuyoshi Nakagawa4 and Yuzo Yamada3,† 1Department of Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand; 2Department of Microbiology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; 3BIOTEC Culture Collection, National Center for Genetic Engineering and Biotechnology, Pathumthani 12120, Thailand; 4Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation, Kisarazu 292-0818, Japan; †JICA Senior Overseas Volunteer, Japan International Cooperation Agency, Shibuya-ku, Tokyo 151-8558, Japan; Professor Emeritus, Shizuoka University, Suruga-ku, Shizuoka 422-8529, Japan *Corresponding author, e-mail: [email protected] Summary Four isolates, isolated from fruit of sapodilla collected at Chantaburi and designated as CT8-1 and CT8-2, and isolated from seeds of ixora („khem” in Thai, Ixora species) collected at Rayong and designated as SI15-1 and SI15-2, were examined taxonomically. The four isolates were selected from a total of 181 isolated acetic acid bacteria. Isolates CT8-1 and CT8-2 were non motile and produced a levan-like mucous polysaccharide from sucrose or D-fructose, but did not produce a water-soluble brown pigment from D-glucose on CaCO3-containing agar slants. The isolates produced acetic acid from ethanol and oxidized acetate and lactate to carbon dioxide and water, but the intensity of the acetate and lactate oxidation was weak. Their growth was not inhibited by 0.35 % acetic acid (v/v) at pH 3.5. -
Enterobacteriaceae Family (CRE), Is of Utmost Importance for the Enterobacteriaceae Management of Infected Or Colonized Patients
2013 iMedPub Journals THE INTERNATIONAL ARABIC JOURNAL Vol. 3 No. 3:5 Our Site: http://www.imedpub.com/ OF ANTIMICROBIAL AGENTS doi: 10.3823/737 Evaluation of Rula Al-Dawodi1,3, Rawan Liddawi1,3, Raed Ghneim1,3, Randa Kattan1,3, Issa Siryani1,3, Afaf Abu-Diab1, Riyad Meropenem, Ghneim1, Madeleine Zoughbi1,3, Abed-El-Razeq Issa1,3, Randa Al Qass1,3, Sultan Turkuman1, Hiyam Marzouqa1, and Imipenem and Musa Hindiyeh1,2,3* Ertapenem 1 Caritas Baby Hospital, 3 Palestinian Forum for Medical * Correspondence: Bethlehem, Palestine; Research (PFMR), Ramallah, Impregnated 2 Bethlehem University, Palestine Bethlehem, Palestine; [email protected] MacConkey * Musa Y Hindiyeh, Caritas Baby Hospital Bethlehem Agar Plates for Palestine. the Detection of Carbapenem Abstract Resistant Background: Rapid detection of carbapenem resistant bacteria, in particular, members of the Enterobacteriaceae family (CRE), is of utmost importance for the Enterobacteriaceae management of infected or colonized patients. Methods: Three carbapenems; meropenem, imipenem and ertapenem, with two different concentrations (0.5 mg/ml and 1.0 mg/ml), were impregnated in Mac- Conkey agar. The carbapenem impregnated MacConkey agar plates; ([Mac-Mem], [Mac-Imp] and [Mac-Ert]), were then evaluated for the detection of carbapenem resistant Gram-negative bacteria in particular the blaKPC producing Enterobacteria- ceae. The Limit of Detection (LOD) of the plates was determined in triplicate after serial logarithmic dilution of the bacterial strains in saline. This was followed by inoculating the plates and counting the colonies that grew after 24 hours of incu- bation. The specificity and the shelf-life of the plates were determined by testing the plates with six Extended Spectrum β-lactamases (ESBL) producing members of the Enterobacteriaceae family and one genus with the blaAmpC phenotype. -
Chocolate Agar Plate MP103 Intended Use for Isolation of Neisseria Gonorrhoeae from Chronic and Acute Gonococcal Infections
Chocolate Agar Plate MP103 Intended use For isolation of Neisseria gonorrhoeae from chronic and acute gonococcal infections. Composition** Ingredients Gms / Litre Proteose peptone 20.000 Dextrose 0.500 Sodium chloride 5.000 Disodium phosphate 5.000 Agar 15.000 After sterilization Sterile Lysed blood (at 80°C) 50.000 Vitamino Growth Supplement (FD025) 2 vials Final pH ( at 25°C) 7.3±0.2 **Formula adjusted, standardized to suit performance parameters Directions Either streak, inoculate or surface spread the test inoculum (50-100 CFU) aseptically on the plate. Principle And Interpretation Neisseria gonorrhoeae is a gram-negative bacteria and the causative agent of gonorrhea, however it is also occasionally found in the throat. The cultivation medium for gonococci should ideally be a rich nutrients base with blood, either partially lysed or completely lysed. The diagnosis and control of gonorrhea have been greatly facilitated by improved laboratory methods for detecting, isolating and studying N. gonorrhoeae. Chocolate Agar Base, with the addition of supplements, gives excellent growth of the gonococcus without overgrowth by contaminating organisms. G.C. Agar (M434) can also be used in place of Chocolate Agar Base, which gives slightly better results than Chocolate Agar (4). The diagnosis and control of gonorrhea have been greatly facilitated by improved laboratory methods for detecting, isolating and studying N. gonorrhoea. Interest in the cultural procedure for the diagnosis of gonococcal infection was stimulated by Ruys and Jens (9), Mcleod and co-workers (8), Thompson (7), Leahy and Carpenter (1), Carpenter, Leahy and Wilson (2) and Carpenter (10), who clearly demonstrated the superiority of this method over the microscopic technique. -
The Gut Microbiota of the Egyptian Mongoose As an Early Warning Indicator of Ecosystem Health in Portugal
International Journal of Environmental Research and Public Health Article The Gut Microbiota of the Egyptian Mongoose as an Early Warning Indicator of Ecosystem Health in Portugal Mónica V. Cunha 1,2,3,* , Teresa Albuquerque 1, Patrícia Themudo 1, Carlos Fonseca 4, Victor Bandeira 4 and Luís M. Rosalino 2,4 1 National Institute for Agrarian and Veterinary Research (INIAV, IP), Wildlife, Hunting and Biodiversity R&D Unit, 2780-157 Oeiras, Portugal; [email protected] (T.A.); [email protected] (P.T.) 2 Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal; [email protected] 3 Biosystems & Integrative Sciences Institute (BioISI), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal 4 Departamento de Biologia & CESAM, Universidade de Aveiro, 3810-193 Aveiro, Portugal; [email protected] (C.F.); [email protected] (V.B.) * Correspondence: [email protected]; Tel.: +351-214-403-500 Received: 1 April 2020; Accepted: 27 April 2020; Published: 29 April 2020 Abstract: The Egyptian mongoose is a carnivore mammal species that in the last decades experienced a tremendous expansion in Iberia, particularly in Portugal, mainly due to its remarkable ecological plasticity in response to land-use changes. However, this species may have a disruptive role on native communities in areas where it has recently arrived due to predation and the potential introduction of novel pathogens. We report reference information on the cultivable gut microbial landscape of widely distributed Egyptian mongoose populations (Herpestes ichneumon, n = 53) and related antimicrobial tolerance across environmental gradients. -
Microbiology (Cbcs Structure)
B.Sc. (HONOURS) MICROBIOLOGY (CBCS STRUCTURE) Proposed Scheme for Choice Based Credit System in B.Sc. Honours in Microbiology Year Semester Core Course Ability Skill enhancement Discipline Specific Generic (14 Papers) enhancement course (SEC)(any 2 Elective Course Elective Course 6 credits compulsory papers) (2 Credits (any 4 papers)(6 (any 4 papers) each course each) credits each (6 credits each) (AECC)(2 papers) (2 credits each) I Paper 1 AECC-1 GE-1/2 Paper 2 Paper 1/2 1 (Any one) II Paper 3 AECC-2 GE-1/2 Paper 3/4 Paper 4 (Any one) III Paper 5 SEC-Paper 1/2 GE-1/2 Paper 6 (Any one) Paper 1/2 2 Paper 7 (Any one) IV Paper 8 SEC-Paper 3/4 GE-1/2 Paper 9 (Any one) Paper 3/4 Paper 10 (Any one) V Paper 11 DSE- Paper 1/2(Any one) Paper 12 DSE- Paper 3/4 (Any one) 3 VI Paper 13 DSE- Paper 5/6 Paper 14 (Any one) DSE- Paper 7/8 (Any one) UNIVERSITY OF NORTH BENGAL Page 1 B.Sc. (HONOURS) MICROBIOLOGY (CBCS STRUCTURE) Overall distribution of credits and marks in B.Sc.(Hons.) In Microbiology Course Total Credits /per Total papers Theory Practical Credits I.Core 14 4 2 14X6=84 Courses II.DSE 4 4 2 4X6=24 III.GE 4 4 2 4X6=24 IV.AECC 2 2 - 2x2=4 V.SEC 2 2 - 2x2=4 Grand 140 total UNIVERSITY OF NORTH BENGAL Page 2 B.Sc. (HONOURS) MICROBIOLOGY (CBCS STRUCTURE) Structure of B. -
Multicellular Oxidant Defense in Unicellular Organisms MUCHOU MA and JOHN W
Proc. Natl. Acad. Sci. USA Vol. 89, pp. 7924-7928, September 1992 Microbiology Multicellular oxidant defense in unicellular organisms MUCHOU MA AND JOHN W. EATON* Division of Experimental Pathology, Department of Pathology and Laboratory Medicine, Albany Medical College, A-81, 47 New Scotland Avenue, Albany, NY 12208 Communicated by David W. Talmage, May 8, 1992 ABSTRACT Although catalase is thought to be a major MATERIALS AND METHODS defense against hydrogen peroxide (H202), the catalase activity Reagents. Brain heart infusion broth, Todd-Hewitt broth, within individual Escherichia coil fails to protect against ex- Lennox L agar (LB agar), and Bactoagar were obtained from ogenous H202. Contrary to earlier reports, we find that dilute GIBCO/BRL. The bicinchoninic acid protein microassay suspensions, of wild-type and catalase-deficient E. colt are was from Pierce. All other enzymes and chemicals were identical in their sensitivity to H202, perhaps because even purchased from Sigma. wild-type, catalase-positive E. colU cannot maintain an inter- Bacterial Strains and Culture Conditions. A catalase- nal/externail concentration gradient of this highly diffusible deficient mutant strain of E. coli K-12 [UM1, hereafter, oxidant. However, concentrated suspensions or colonies of cat(-)] and its parent wild-type [CSH7, hereafter cat(+)] (17) catalase-positive E. colt do preferentially survive H202 chal- were provided by P. C. Loewen (University ofManitoba). E. lenge and can even cross-protect adjacent catalase-deficient coli were grown statically in brain heart infusion broth or M9 organisms. Furthermore, high-density catalase-positive-but minimal salts medium supplemented with 10 mM glucose not catalase-negative-E. colt can survive and multiply in the (M9/glucose) (25) at 370C in room air overnight (18-20 hr) to presence of competitive, peroxide-generating streptococci. -
Growth Characteristics of Escherichia Coli and Staphylococcus Aureus Bacteria on Alternative Medium Leaves of Lamtoro (Leucaena Leucocephala)
Journal of Xi'an University of Architecture & Technology ISSN No : 1006-7930 Growth Characteristics of Escherichia coli and Staphylococcus aureus Bacteria on Alternative Medium Leaves of Lamtoro (Leucaena leucocephala) Meidawati Suswandari*, Department of Primary School, Faculty of Teacher Training and Education, Universitas Veteran Bangun Nusantara, Sukoharjo, Indonesia Lamtoro leaf has a high protein content. The protein content is very suitable for bacterial growth. Because of the high cost of bacterial growth media for educational and research institutions, lamtoro leaves can be used as an alternative medium for bacterial growth in general. The purpose of this study was to determine the potential of lamtoro leaf as an alternative medium for bacterial growth in general. This research is descriptive. Alternative mediums of lamtoro leaf were tested for the growth of Escherichia coli and Staphylococcus aureus. Escherichia coli bacteria grow on three alternative medium plates. After final identification, there are Escherichia coli bacteria. Whereas the Staphylococcus aureus bacterium did not grow on seven plates of alternative medium despite being incubated for 48 hours. Lamtoro leaf has less potential as an alternative medium for bacterial growth in general. The lamtoro leaf medium can only be used as a growth medium for gram-negative bacteria. While the growth of gram-positive bacteria there is no growth due to the presence of active substances in lamtoro leaves. Key words: Leaves of Lamtoro, Alternative Media, Escherichia coli, Staphylococcus aureus Introduction Bacteria are single-celled creatures that are very small or microscopic. Hans Christian Gram divides bacteria based on the characteristics of cell walls through the Gram staining system, namely Gram Positive and Gram Negative bacteria (Elferia, et al, 1996; Elliot, 2013; Harvey, 2001; Clausen, Gildberg, and Raa, 1985). -
Macconkey Agar, CS, Product Information
MacCONKEY AGAR, CS (7391) Intended Use MacConkey Agar, CS is used for the isolation and differentiation of Gram-negative enteric bacilli from specimens containing swarming strains of Proteus spp. in a laboratory setting. MacConkey Agar, CS is not intended for use in the diagnosis of disease or other conditions in humans Product Summary and Explanation MacConkey Agar is based on the bile salt-neutral red-lactose agar of MacConkey.1 The original MacConkey medium was used to differentiate strains of Salmonella typhosa from members of the coliform group. Formula modifications improved growth of Shigella and Salmonella strains. These modifications include the addition of 0.5% sodium chloride, decreased agar content, altered bile salts, and neutral red concentrations. The formula modifications improved differential reactions between enteric pathogens and coliforms. MacConkey Agar, CS (“Controlled Swarming”) contains carefully selected raw materials to reduce swarming of Proteus spp., which could cause difficulty in isolating and enumerating other Gram-negative bacilli. Principles of the Procedure Enzymatic Digest of Gelatin, Enzymatic Digest of Casein, and Enzymatic Digest of Animal Tissue are the nitrogen and vitamin sources in MacConkey Agar, CS. Lactose is the fermentable carbohydrate. During Lactose fermentation a local pH drop around the colony causes a color change in the pH indicator, Neutral Red, and bile precipitation. Bile Salts and Crystal Violet are the selective agents, inhibiting Gram-positive cocci and allowing Gram-negative organisms to grow. Sodium Chloride maintains the osmotic environment. Agar is the solidifying agent. Formula / Liter Enzymatic Digest of Gelatin .................................................... 17 g Enzymatic Digest of Casein ................................................... 1.5 g Enzymatic Digest of Animal Tissue....................................... -
Francisella Tularensis 6/06 Tularemia Is a Commonly Acquired Laboratory Colony Morphology Infection; All Work on Suspect F
Francisella tularensis 6/06 Tularemia is a commonly acquired laboratory Colony Morphology infection; all work on suspect F. tularensis cultures .Aerobic, fastidious, requires cysteine for growth should be performed at minimum under BSL2 .Grows poorly on Blood Agar (BA) conditions with BSL3 practices. .Chocolate Agar (CA): tiny, grey-white, opaque A colonies, 1-2 mm ≥48hr B .Cysteine Heart Agar (CHA): greenish-blue colonies, 2-4 mm ≥48h .Colonies are butyrous and smooth Gram Stain .Tiny, 0.2–0.7 μm pleomorphic, poorly stained gram-negative coccobacilli .Mostly single cells Growth on BA (A) 48 h, (B) 72 h Biochemical/Test Reactions .Oxidase: Negative A B .Catalase: Weak positive .Urease: Negative Additional Information .Can be misidentified as: Haemophilus influenzae, Actinobacillus spp. by automated ID systems .Infective Dose: 10 colony forming units Biosafety Level 3 agent (once Francisella tularensis is . Growth on CA (A) 48 h, (B) 72 h suspected, work should only be done in a certified Class II Biosafety Cabinet) .Transmission: Inhalation, insect bite, contact with tissues or bodily fluids of infected animals .Contagious: No Acceptable Specimen Types .Tissue biopsy .Whole blood: 5-10 ml blood in EDTA, and/or Inoculated blood culture bottle Swab of lesion in transport media . Gram stain Sentinel Laboratory Rule-Out of Francisella tularensis Oxidase Little to no growth on BA >48 h Small, grey-white opaque colonies on CA after ≥48 h at 35/37ºC Positive Weak Negative Positive Catalase Tiny, pleomorphic, faintly stained, gram-negative coccobacilli (red, round, and random) Perform all additional work in a certified Class II Positive Biosafety Cabinet Weak Negative Positive *Oxidase: Negative Urease *Catalase: Weak positive *Urease: Negative *Oxidase, Catalase, and Urease: Appearances of test results are not agent-specific. -
XL Agar Base • XLD Agar
XL Agar Base • XLD Agar clinical evaluations have supported the claim for the relatively Intended Use high efficiency of XLD Agar in the primary isolation ofShigella XL (Xylose Lysine) Agar Base is used for the isolation and and Salmonella.5-9 differentiation of enteric pathogens and, when supplemented with appropriate additives, as a base for selective enteric media. XLD Agar is a selective and differential medium used for the isolation and differentiation of enteric pathogens from clinical XLD Agar is the complete Xylose Lysine Desoxycholate Agar, specimens.10-12 The value of XLD Agar in the clinical laboratory a moderately selective medium recommended for isolation and is that the medium is more supportive of fastidious enteric organ- differentiation of enteric pathogens, especially Shigella species. isms such as Shigella.12 XLD Agar is also recommended for the XLD Agar meets United States Pharmacopeia (USP), European testing of food, dairy products and water in various industrial Pharmacopoeia (EP) and Japanese Pharmacopoeia (JP)1-3 standard test methods.13-17 General Chapter <62> of the USP performance specifications, where applicable. describes the test method for the isolation of Salmonella from nonsterile pharmaceutical products using XLD Agar as the solid Summary and Explanation culture medium.1 A wide variety of media have been developed to aid in the selective isolation and differentiation of enteric pathogens. Due Principles of the Procedure to the large numbers of different microbial species and strains Xylose is incorporated into the medium because it is fermented with varying nutritional requirements and chemical resistance by practically all enterics except for the shigellae. -
Chocolate Agar W/Enrichments Catalog No.: P3025 Blood Agar/Chocolate Bi-Plate Catalog No.: T1250chocolate Agar Slant
Administrative Offices Phone: 207-873-7711 Fax: 207-873-7022 Customer Service P.O. Box 788 Phone: 1-800-244-8378 Fax: 207-873-7022 Waterville, Maine 04903-0788 227 China Road Winslow, Maine 04901 TECHNICAL PRODUCT INFORMATION Catalog No.: P1150Chocolate Agar w/Enrichments Catalog No.: P3025 Blood Agar/Chocolate Bi-plate Catalog No.: T1250Chocolate Agar Slant INTENDED USE: Chocolate Agar is recommended for the cultivation and isolation of Neisseria and Haemophilus species. CO 2 favors primary isolation. The medium is best for organisms which require X and V Factor. HISTORY/SUMMARY: Interest in the cultural procedure for the diagnosis of gonococcal infections was stimulated by Ruys and Hens McLeod et al 2, Leahy and Carpenter, Leahy and Wilson 5 and Carpenter 6 who clearly demonstrated the superiority of this method over the microscopic technique. Further studies in cooperation with Carpenter, and McLeod 7 and Herrold resulted in the development of Chocolate Agar prepared with Proteose No. 3 Agar and Hemoglobin, which proved to be satisfactory for isolating the organism from all types of gonococcal infections. Chapin and Doern found that in only 6 of 17 cases was Haemophilus influenzae recovered from sputum specimens cultured by using conventional techniques including enriched chocolate agar (CHOC) media, despite the fact that gram stained smears of sputum specimens often revealed a predominance of pleomorphic gram- negative bacilli. Observations such as these have lead to the development of selective media which inhibit upper respiratory tract microbial flora while permitting growth of Haemophilus influenzae . Approaches utilized most frequently incorporate bacitracin into various enriched basal media ( 11, 12, 13, 14 ).