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Evolution and Ecology in Widespread Acoustic Signaling Behavior Across Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2020.09.14.296335; this version posted September 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Evolution and Ecology in Widespread Acoustic Signaling Behavior Across Fishes 2 Aaron N. Rice1*, Stacy C. Farina2, Andrea J. Makowski3, Ingrid M. Kaatz4, Philip S. Lobel5, 3 William E. Bemis6, Andrew H. Bass3* 4 5 1. Center for Conservation Bioacoustics, Cornell Lab of Ornithology, Cornell University, 159 6 Sapsucker Woods Road, Ithaca, NY, USA 7 2. Department of Biology, Howard University, 415 College St NW, Washington, DC, USA 8 3. Department of Neurobiology and Behavior, Cornell University, 215 Tower Road, Ithaca, NY 9 USA 10 4. Stamford, CT, USA 11 5. Department of Biology, Boston University, 5 Cummington Street, Boston, MA, USA 12 6. Department of Ecology and Evolutionary Biology and Cornell University Museum of 13 Vertebrates, Cornell University, 215 Tower Road, Ithaca, NY, USA 14 15 ORCID Numbers: 16 ANR: 0000-0002-8598-9705 17 SCF: 0000-0003-2479-1268 18 WEB: 0000-0002-5669-2793 19 AHB: 0000-0002-0182-6715 20 21 *Authors for Correspondence 22 ANR: [email protected]; AHB: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.09.14.296335; this version posted September 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
NOAA Professional Paper #15.Indd
NOAA Professional Paper 15 October 2013 Guide to the identifi cation of larval and early juvenile pricklebacks (Perciformes: Zoarcoidei: Stichaeidae) in the northeastern Pacifi c Ocean and Bering Sea Ann C. Matarese Deborah M. Blood Morgan S. Busby U.S. Department of Commerce NOAA Professional Penny S. Pritzker Secretary of Commerce Papers NMFS National Oceanic and Atmospheric Administration Kathryn D. Sullivan Scientifi c Editor Acting Administrator Bruce C. Mundy Associate Editor National Marine Kathryn Dennis Fisheries Service National Marine Fisheries Service Samuel D. Rauch III Pacifi c Islands Fisheries Science Center Acting Assistant Administrator for Fisheries Aiea Heights Research Facility 99-193 Aiea Heights Drive, Suite 417 Aiea, Hawaii 96701-3911 Managing Editor Shelley Arenas National Marine Fisheries Service Scientifi c Publications Offi ce 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service - The NOAA Professional Paper NMFS (ISSN 1931-4590) series is published by the Scientifi c Publications Offi ce, National Marine Fisheries Service, The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original NOAA, 7600 Sand Point Way NE, research reports, taxonomic keys, species synopses, fl ora and fauna studies, and data- Seattle, WA 98115. intensive reports on investigations in fi shery science, engineering, and economics. The Secretary of Commerce has Copies of the NOAA Professional Paper NMFS series are available free in limited determined that the publication of numbers to government agencies, both federal and state. They are also available in this series is necessary in the transac- exchange for other scientifi c and technical publications in the marine sciences. -
<I>Normanichthys Crockeri</I>
BULLETIN OF MARINE SCIENCE. 58(2): 494-510.1996 ANATOMICAL DESCRIPTION OF NORMANICHTHYS CROCKERI (SCORPAENIFORMES, INCERTAE SEDIS: FAMILY NORMANICHTHYIDAE) Mamoru Yabe and Teruya Uyeno ABSTRACT To reconsider the doubtful systematic position of Normanichthys crockeri in the suborder Cottoidci, its osteology, myology and other morphology are described. Normanichthys does not share 10 of the 20 synapomorphies that limit the Cottoidei (4th pharyngobranchial absent; basihyal absent or rudiment; posttemporal fossa reduced; extrinsic muscle of swimbladdcr between cranium and cleithrum; pleural ribs absent on anterior vertebrae; lachrymal-palatine articulation present; scapula separated from coracoid, hypurapophysis absent; one or two hypurals; levator externus III absent). Other 10 synapomorphies of Cottoidci arc shared by Normanichthys. but each of them is known to occur homoplasiously (or synapomorphic) in non-colloid fishes (no basisphenoid absent; small interealar; no metapterygoid lamina; scap- ular foramen open; no anal-fin spine; hyohyoidei abductores II fused to its antimere; no extensor proprius; no adductor dorsalis; epipleural attached to vertebra). Moreover, Norman- ichthys has the swimbladder which is not present in all colloid fishes. The placement of the monotypic family Norrnanichthyidae in the suborder Cottoidei is rejected. Normanicllthys is regarded as a member of the order Scorpaeniformes because it has the suborbital stay which is the only synapomorphy of this order. At least Normanichthys is not a member of the monophyletic taxon Cottoidei, but its suborder rank is still uncertain because its reasonable sister group could not been clarified. Normanichthys crockeri is a small pelagic fish endemic to the coastal region of Chile, which has been classified as a perciform or scorpaeniform fish (Norman, 1938; Tortonese, 1941; Pequeno, 1978; Balbontfn and Perez, 1980). -
Phylogenetic Classification of Bony Fishes Ricardo Betancur-R1,2*, Edward O
Betancur-R et al. BMC Evolutionary Biology (2017) 17:162 DOI 10.1186/s12862-017-0958-3 RESEARCH ARTICLE Open Access Phylogenetic classification of bony fishes Ricardo Betancur-R1,2*, Edward O. Wiley3,4, Gloria Arratia3, Arturo Acero5, Nicolas Bailly6, Masaki Miya7, Guillaume Lecointre8 and Guillermo Ortí2,9 Abstract Background: Fish classifications, as those of most other taxonomic groups, are being transformed drastically as new molecular phylogenies provide support for natural groups that were unanticipated by previous studies. A brief review of the main criteria used by ichthyologists to define their classifications during the last 50 years, however, reveals slow progress towards using an explicit phylogenetic framework. Instead, the trend has been to rely, in varying degrees, on deep-rooted anatomical concepts and authority, often mixing taxa with explicit phylogenetic support with arbitrary groupings. Two leading sources in ichthyology frequently used for fish classifications (JS Nelson’s volumes of Fishes of the World and W. Eschmeyer’s Catalog of Fishes) fail to adopt a global phylogenetic framework despite much recent progress made towards the resolution of the fish Tree of Life. The first explicit phylogenetic classification of bony fishes was published in 2013, based on a comprehensive molecular phylogeny (www.deepfin.org). We here update the first version of that classification by incorporating the most recent phylogenetic results. Results: The updated classification presented here is based on phylogenies inferred using molecular and genomic data for nearly 2000 fishes. A total of 72 orders (and 79 suborders) are recognized in this version, compared with 66 orders in version 1. The phylogeny resolves placement of 410 families, or ~80% of the total of 514 families of bony fishes currently recognized. -
Phylogeny and Taxonomy of Sculpins, Sandfishes, and Snailfishes
Molecular Phylogenetics and Evolution 79 (2014) 332–352 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Phylogeny and taxonomy of sculpins, sandfishes, and snailfishes (Perciformes: Cottoidei) with comments on the phylogenetic significance of their early-life-history specializations ⇑ W. Leo Smith a, , Morgan S. Busby b a Biodiversity Institute and Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS 66045, USA b Alaska Fisheries Science Center, National Marine Fisheries Service, 7600 Sand Point Way NE, Seattle, WA 98115, USA article info abstract Article history: Despite recent progress on the higher-level relationships of the Cottoidei and its familial components, Received 24 April 2014 phylogenetic conflict and uncertainty remain within the Cottoidea. We analyzed a dataset composed Revised 27 June 2014 of 4518 molecular (mitochondrial 12S, tRNA-Val, 16S, and cytochrome b and nuclear TMO-4c4, Histone Accepted 30 June 2014 H3, and 28S) and 72 morphological characters for 69 terminals to address cottoid intrarelationships. The Available online 8 July 2014 resulting well-resolved phylogeny was used to produce a revised taxonomy that is consistent with the available molecular and morphological data and recognizes six families: Agonidae, Cottidae, Jordaniidae, Keywords: Psychrolutidae, Rhamphocottidae, and Scorpaenichthyidae. The traditional Agonidae was expanded to Scorpaeniformes include traditional hemitripterids and Hemilepidotus. The traditional Cottidae was restricted to Leptocot- Perciformes Mail-cheeked fishes tus, Trachidermus, and the riverine, lacustrine, and Lake Baikal freshwater cottoids. Jordaniidae (Jordania Reproduction and Paricelinus) was separated from the traditional cottids; Psychrolutidae was expanded from the Larvae traditional grouping to include nearly all traditional marine cottids and the single species of bathy- lutichthyid. -
Demise of the Scorpaeniformes (Actinopterygii: Percomorpha):An Alternative Phylogenetic Hypothesis
Title Demise of the Scorpaeniformes (Actinopterygii: Percomorpha):An Alternative Phylogenetic Hypothesis Author(s) IMAMURA, Hisashi; YABE, Mamoru Citation 北海道大学水産科学研究彙報, 53(3), 107-128 Issue Date 2002-12 Doc URL http://hdl.handle.net/2115/21975 Type bulletin (article) File Information 53(3)_P107-128.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP Bull. Fish. Sci. Hokkaido Univ. 53(3), 107-128, 2002. Demise of the Scorpaeniformes (Actinopterygii: Percomorpha): An Alternative Phylogenetic Hypothesis Hisashi IMAMURA 1) and Mamoru Y ABE2) (Received 13 September 2002. Accepted 11 October 2(02) Abstract The Scorpaeniformes has been defined by two synapomorphies, the presence of a suborbital stay and a bony parietal structure supporting the sensory canal, but monophyly for the order is still uncertain. Two monophyletic groups of scorpaeniform fishes are currently recognized: a scorpaenoid lineage, including the suborders Scor paenoidei and Platycephaloidei; and a cottoid lineage, containing suborders Anoplopomatoidei, Zaniolepidoidei, Hexagrammoidei and Cottoidei. Synapomorphies that support the monophyly of these two lineages, four in the case of the scorpaenoid lineage and 13 for the cottoid lineage, are reviewed and reevaluated. Comparison of these two sets of synapomorphies with those that define percomorph taxa, provides evidence to support the following phylogenetic hypotheses: (I) the scorpaenoid lineage and percoid family Serranidae have a close relationship supported by two synapomorphies; and (2) the cottoid lineage and perciform suborder Zoarcoidei have a sister relationship supported by 13 synapomorphies. The order Scorpaeniformes as currently recognized is thus hypoth esized to be polyphyletic. We propose reallocation of both lineages to the order Perciformes, recognizing a suborder Scorpaenoidei to contain the scorpaenoid lineage plus Serranidae, and a suborder Cottoidei closely aligned with the Zoarcoidei to contain the cottoid lineage.