BMPR2 Inhibits Activin- and BMP-Signaling Via Wild Type ALK2
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Characterization of Protein Kinase C Alpha Deficiency in a Mouse Model
Aus der Medizinischen Klinik mit Schwerpunkt Infektiologie und Pneumologie der Charité – Universitätsmedizin Berlin Eingereicht über das Institut für Veterinär-Physiologie des Fachbereichs Veterinärmedizin der Freien Universität Berlin Characterization of Protein Kinase C Alpha Deficiency in a Mouse Model Inaugural-Dissertation zur Erlangung des Doctor of Philosophy (Ph.D.) an der Freien Universität Berlin vorgelegt von Elena Ariane Noe Tierärztin aus Düsseldorf Berlin 2016 Journal-Nr.: 3878 Gedruckt mit Genehmigung des Fachbereichs Veterinärmedizin der Freien Universität Berlin Dekan: Univ.-Prof. Dr. Jürgen Zentek Erster Gutachter: Prof. Dr. Dr. Petra Reinhold Zweiter Gutachter: Univ.-Prof. Dr. Martin Witzenrath Dritter Gutachter: Univ.-Prof. Dr. Christa Thöne-Reineke Deskriptoren (nach CAB-Thesaurus): Mice; animal models; protein kinase C (MeSH); pulmonary artery; hypertension; blood pressure, vasoconstriction; esophageal sphincter, lower (MeSH); respiratory system; smooth muscle; esophageal achalasia (MeSH) Tag der Promotion: 14.07.2016 Contents Contents ................................................................................................................................... V List of Abbreviations ............................................................................................................... VII 1 Introduction ................................................................................................................. 1 1.1 Protein Kinase C (PKC) and its Role in Smooth Muscle Contraction ........................ -
Screening and Identification of Key Biomarkers in Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis
bioRxiv preprint doi: https://doi.org/10.1101/2020.12.21.423889; this version posted December 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Screening and identification of key biomarkers in clear cell renal cell carcinoma based on bioinformatics analysis Basavaraj Vastrad1, Chanabasayya Vastrad*2 , Iranna Kotturshetti 1. Department of Biochemistry, Basaveshwar College of Pharmacy, Gadag, Karnataka 582103, India. 2. Biostatistics and Bioinformatics, Chanabasava Nilaya, Bharthinagar, Dharwad 580001, Karanataka, India. 3. Department of Ayurveda, Rajiv Gandhi Education Society`s Ayurvedic Medical College, Ron, Karnataka 562209, India. * Chanabasayya Vastrad [email protected] Ph: +919480073398 Chanabasava Nilaya, Bharthinagar, Dharwad 580001 , Karanataka, India bioRxiv preprint doi: https://doi.org/10.1101/2020.12.21.423889; this version posted December 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Clear cell renal cell carcinoma (ccRCC) is one of the most common types of malignancy of the urinary system. The pathogenesis and effective diagnosis of ccRCC have become popular topics for research in the previous decade. In the current study, an integrated bioinformatics analysis was performed to identify core genes associated in ccRCC. An expression dataset (GSE105261) was downloaded from the Gene Expression Omnibus database, and included 26 ccRCC and 9 normal kideny samples. Assessment of the microarray dataset led to the recognition of differentially expressed genes (DEGs), which was subsequently used for pathway and gene ontology (GO) enrichment analysis. -
ACVR1 Antibody Cat
ACVR1 Antibody Cat. No.: 4791 Western blot analysis of ACVR1 in A549 cell lysate with ACVR1 antibody at 1 μg/mL in (A) the absence and (B) the presence of blocking peptide. Specifications HOST SPECIES: Rabbit SPECIES REACTIVITY: Human, Mouse HOMOLOGY: Predicted species reactivity based on immunogen sequence: Bovine: (100%), Rat: (93%) ACVR1 antibody was raised against a 14 amino acid synthetic peptide near the amino terminus of the human ACVR1. IMMUNOGEN: The immunogen is located within the first 50 amino acids of ACVR1. TESTED APPLICATIONS: ELISA, WB ACVR1 antibody can be used for detection of ACVR1 by Western blot at 1 μg/mL. APPLICATIONS: Antibody validated: Western Blot in human samples. All other applications and species not yet tested. At least four isoforms of ACVR1 are known to exist. This antibody is predicted to have no SPECIFICITY: cross-reactivity to ACVR1B or ACVR1C. POSITIVE CONTROL: 1) Cat. No. 1203 - A549 Cell Lysate Properties October 1, 2021 1 https://www.prosci-inc.com/acvr1-antibody-4791.html PURIFICATION: ACVR1 Antibody is affinity chromatography purified via peptide column. CLONALITY: Polyclonal ISOTYPE: IgG CONJUGATE: Unconjugated PHYSICAL STATE: Liquid BUFFER: ACVR1 Antibody is supplied in PBS containing 0.02% sodium azide. CONCENTRATION: 1 mg/mL ACVR1 antibody can be stored at 4˚C for three months and -20˚C, stable for up to one STORAGE CONDITIONS: year. As with all antibodies care should be taken to avoid repeated freeze thaw cycles. Antibodies should not be exposed to prolonged high temperatures. Additional Info OFFICIAL SYMBOL: ACVR1 ACVR1 Antibody: FOP, ALK2, SKR1, TSRI, ACTRI, ACVR1A, ACVRLK2, Activin receptor type-1, ALTERNATE NAMES: Activin receptor type I, ACTR-I ACCESSION NO.: NP_001096 PROTEIN GI NO.: 4501895 GENE ID: 90 USER NOTE: Optimal dilutions for each application to be determined by the researcher. -
Product Data Sheet
KAMIYA BIOMEDICAL COMPANY Rev. 082707 PRODUCT DATA SHEET Product: Bone Morphogenetic Protein Receptor Type IA (BMPR1A), (human recombinant) Cat. No.: BP-026 (10 µg) Synonyms: Reconstitution: BMPR-1A, BMP-R1A, BMPR1A, BMR1A, It is recommended to reconstitute the lyophilized CD292, CD-292, Serine/threonine-protein kinase recombinant human BMPR1A in sterile PBS at receptor R5, SKR5, Activin receptor-like kinase not less than 100 µg/mL, which can then be 3, ALK-3, ACVRLK3, EC 2.7.11.30, CD292 further diluted to other aqueous solutions. antigen. Storage: Background: Lyophilized protein is stable for at least 3 weeks The bone morphogenetic protein (BMP) at room temperature. Long term storage should receptors are a family of transmembrane be below -18 °C, desiccated. Upon serine/threonine kinases that include the type I reconstitution, human recombinant BMPR1A receptors BMPR1A and BMPR1B and the type II should be stored at 4°C between 2-7 days, and receptor BMPR2. These receptors are also for future use below -18°C. For long term closely related to the activin receptors, ACVR1 storage it is recommended to add a carrier and ACVR2. The ligands of these receptors are members of the TGF-beta superfamily. TGF- protein (0.1% HSA or BSA). Aliquot to avoid betas and activins transduce their signals freeze/thaw cycles. through the formation of heteromeric complexes with two different types of serine (threonine) Purity: kinase receptors: type I receptors of about 50-55 >90% determined by RP-HPLC, and SDS-PAGE. kDa and type II receptors of about 70-80 kDa. Type II receptors bind ligands in the absence of Biological Activity: type I receptors, but they require their respective Measured by its ability to inhibit recombinant type I receptors for signaling, whereas type I human BMP-2 induced alkaline phosphatase receptors require their respective type II production by C2C12 myogenic cells. -
Characterization of Pulmonary Arteriovenous Malformations in ACVRL1 Versus ENG Mutation Carriers in Hereditary Hemorrhagic Telangiectasia
© American College of Medical Genetics and Genomics ORIGINAL RESEARCH ARTICLE Characterization of pulmonary arteriovenous malformations in ACVRL1 versus ENG mutation carriers in hereditary hemorrhagic telangiectasia Weiyi Mu, ScM1, Zachary A. Cordner, MD, PhD2, Kevin Yuqi Wang, MD3, Kate Reed, MPH, ScM4, Gina Robinson, RN5, Sally Mitchell, MD5 and Doris Lin, MD, PhD5 Purpose: Pulmonary arteriovenous malformations (pAVMs) are mutation carriers to have pAVMs (P o 0.001) or multiple lesions major contributors to morbidity and mortality in hereditary (P = 0.03), and to undergo procedural intervention (P = 0.02). hemorrhagic telangiectasia (HHT). Mutations in ENG and ACVRL1 Additionally, pAVMs in ENG carriers were more likely to exhibit underlie the vast majority of clinically diagnosed cases. The aims of bilateral lung involvement and growth over time, although this did this study were to characterize and compare the clinical and not reach statistical significance. The HHT severity score was morphologic features of pAVMs between these two genotype significantly higher in ENG than in ACVRL1 (P = 0.02). groups. Conclusion: The propensity and multiplicity of ENG-associated Methods: Sixty-six patients with HHT and affected family pAVMs may contribute to the higher disease severity in this members were included. Genotype, phenotypic data, and imaging genotype, as reflected by the HHT severity score and the frequency were obtained from medical records. Morphologic features of of interventional procedures. pAVMs were analyzed using computed tomography angiography. Genet Med HHT symptoms, pAVM imaging characteristics, frequency of advance online publication 19 October 2017 procedural intervention, and HHT severity scores were compared Key Words: ACVRL1; ENG; genotype-phenotype correlation; between ENG and ACVRL1 genotype groups. -
A Truncated Bone Morphogenetic Protein Receptor Affects Dorsal-Ventral Patterning in the Early Xenopus Embryo ATSUSHI SUZUKI*, R
Proc. Nati. Acad. Sci. USA Vol. 91, pp. 10255-10259, October 1994 Developmental Biology A truncated bone morphogenetic protein receptor affects dorsal-ventral patterning in the early Xenopus embryo ATSUSHI SUZUKI*, R. ScoTT THIESt, NOBORU YAMAJIt*, JEFFREY J. SONGt, JOHN M. WOZNEYt, KAZUO MURAKAMI§, AND NAOTO UENO*1 *Faculty of Pharmaceutical Sciences, Hokkaido University, Sapporo 060, Japan; tGenetics Institute Inc., 87 Cambridge Park Drive, Cambridge, MA 02140; tYamanouchi Pharmaceutical Co., Ltd., Tokyo 103, Japan; and Institute of Applied Biochemistry, University of Tsukuba, Tsukuba, Ibaraki 305, Japan Communicated by Igor B. Dawid, July 13, 1994 ABSTRACT Bone morphogenetic proteins (BMPs), which corresponding proteins are present in developing Xenopus are members of the trnsming growth factor 13 (TGF-I) embryos, and overexpression of BMP4 in the embryos superfamily, have been implicated in bone formation and the enhances the formation of ventral mesoderm (8-11). Animal regulation ofearly development. To better understand the roles cap ectoderm treated with a combination of BMP4 and of BMPs in Xenopus laevis embryogenesis, we have cloned a activin also results in the formation of ventral mesoderm, cDNA coding for a serine/threonine kinase receptor that binds suggesting that BMP-4 is a ventralizing factor that acts by BMP-2 and BMP-4. To analyze its function, we attempted to overriding the dorsalizing signal provided by activin (8, 9). block the BMP signaling pathway in Xenopus embryos by using Therefore, activin and BMP-4 are thought to play important a domint-negative mutant of the BMP receptor. When the roles in the dorsal-ventral patterning of embryonic meso- mutant receptor lacking the putative serine/threonine kinase derm. -
Tumor Promoting Effect of BMP Signaling in Endometrial Cancer
International Journal of Molecular Sciences Article Tumor Promoting Effect of BMP Signaling in Endometrial Cancer Tomohiko Fukuda 1,* , Risa Fukuda 1, Kohei Miyazono 1,2,† and Carl-Henrik Heldin 1,*,† 1 Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Box 582, Uppsala University, SE-751 23 Uppsala, Sweden; [email protected] (R.F.); [email protected] (K.M.) 2 Department of Molecular Pathology, Graduate School of Medicine, The University of Tokyo, Tokyo 113-0033, Japan * Correspondence: [email protected] (T.F.); [email protected] (C.-H.H.); Tel.: +46-18-4714738 (T.F.); +46-18-4714738 (C.-H.H.) † These authors contributed equally to this work. Abstract: The effects of bone morphogenetic proteins (BMPs), members of the transforming growth factor-β (TGF-β) family, in endometrial cancer (EC) have yet to be determined. In this study, we analyzed the TCGA and MSK-IMPACT datasets and investigated the effects of BMP2 and of TWSG1, a BMP antagonist, on Ishikawa EC cells. Frequent ACVR1 mutations and high mRNA expressions of BMP ligands and receptors were observed in EC patients of the TCGA and MSK-IMPACT datasets. Ishikawa cells secreted higher amounts of BMP2 compared with ovarian cancer cell lines. Exogenous BMP2 stimulation enhanced EC cell sphere formation via c-KIT induction. BMP2 also induced EMT of EC cells, and promoted migration by induction of SLUG. The BMP receptor kinase inhibitor LDN193189 augmented the growth inhibitory effects of carboplatin. Analyses of mRNAs of several BMP antagonists revealed that TWSG1 mRNA was abundantly expressed in Ishikawa cells. -
Multi-Modal Meta-Analysis of 1494 Hepatocellular Carcinoma Samples Reveals
Author Manuscript Published OnlineFirst on September 21, 2018; DOI: 10.1158/1078-0432.CCR-18-0088 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. Multi-modal meta-analysis of 1494 hepatocellular carcinoma samples reveals significant impact of consensus driver genes on phenotypes Kumardeep Chaudhary1, Olivier B Poirion1, Liangqun Lu1,2, Sijia Huang1,2, Travers Ching1,2, Lana X Garmire1,2,3* 1Epidemiology Program, University of Hawaii Cancer Center, Honolulu, HI 96813, USA 2Molecular Biosciences and Bioengineering Graduate Program, University of Hawaii at Manoa, Honolulu, HI 96822, USA 3Current affiliation: Department of Computational Medicine and Bioinformatics, Building 520, 1600 Huron Parkway, Ann Arbor, MI 48109 Short Title: Impact of consensus driver genes in hepatocellular carcinoma * To whom correspondence should be addressed. Lana X. Garmire, Department of Computational Medicine and Bioinformatics Medical School, University of Michigan Building 520, 1600 Huron Parkway Ann Arbor-48109, MI, USA, Phone: +1-(734) 615-5510 Current email address: [email protected] Grant Support: This research was supported by grants K01ES025434 awarded by NIEHS through funds provided by the trans-NIH Big Data to Knowledge (BD2K) initiative (http://datascience.nih.gov/bd2k), P20 COBRE GM103457 awarded by NIH/NIGMS, NICHD R01 HD084633 and NLM R01LM012373 and Hawaii Community Foundation Medical Research Grant 14ADVC-64566 to Lana X Garmire. 1 Downloaded from clincancerres.aacrjournals.org on October 1, 2021. © 2018 American Association for Cancer Research. Author Manuscript Published OnlineFirst on September 21, 2018; DOI: 10.1158/1078-0432.CCR-18-0088 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. -
Saracatinib Is an Efficacious Clinical Candidate for Fibrodysplasia Ossificans Progressiva
RESEARCH ARTICLE Saracatinib is an efficacious clinical candidate for fibrodysplasia ossificans progressiva Eleanor Williams,1 Jana Bagarova,2 Georgina Kerr,1 Dong-Dong Xia,2 Elsie S. Place,3 Devaveena Dey,2 Yue Shen,2 Geoffrey A. Bocobo,2 Agustin H. Mohedas,2 Xiuli Huang,4 Philip E. Sanderson,4 Arthur Lee,4 Wei Zheng,4 Aris N. Economides,5 James C. Smith,3 Paul B. Yu,2 and Alex N. Bullock1 1Centre for Medicines Discovery, University of Oxford, Oxford, United Kingdom. 2Department of Medicine, Cardiovascular Division, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts, USA. 3Developmental Biology Laboratory, Francis Crick Institute, London, United Kingdom. 4National Center for Advancing Translational Sciences, NIH, Bethesda, Maryland, USA. 5Regeneron Pharmaceuticals Inc., Tarrytown, New York, USA. Currently, no effective therapies exist for fibrodysplasia ossificans progressiva (FOP), a rare congenital syndrome in which heterotopic bone is formed in soft tissues owing to dysregulated activity of the bone morphogenetic protein (BMP) receptor kinase ALK2 (also known as ACVR1). From a screen of known biologically active compounds, we identified saracatinib as a potent ALK2 kinase inhibitor. In enzymatic and cell-based assays, saracatinib preferentially inhibited ALK2, compared with other receptors of the BMP/TGF-β signaling pathway, and induced dorsalization in zebrafish embryos consistent with BMP antagonism. We further tested the efficacy of saracatinib using an inducible ACVR1Q207D-transgenic mouse line, which provides a model of heterotopic ossification (HO), as well as an inducible ACVR1R206H-knockin mouse, which serves as a genetically and physiologically faithful FOP model. In both models, saracatinib was well tolerated and potently inhibited the development of HO, even when administered transiently following soft tissue injury. -
Identification of Two Novel Mutations in the NOG Gene Associated With
Journal of Human Genetics (2015) 60, 27–34 & 2015 The Japan Society of Human Genetics All rights reserved 1434-5161/15 www.nature.com/jhg ORIGINAL ARTICLE Identification of two novel mutations in the NOG gene associated with congenital stapes ankylosis and symphalangism Akira Ganaha1,3, Tadashi Kaname2,3, Yukinori Akazawa1,3, Teruyuki Higa1,3, Ayano Shinjou1,3, Kenji Naritomi2,3 and Mikio Suzuki1,3 In this study, we describe three unrelated Japanese patients with hearing loss and symphalangism who were diagnosed with proximal symphalangism (SYM1), atypical multiple synostosis syndrome (atypical SYNS1) and stapes ankylosis with broad thumb and toes (SABTT), respectively, based on the clinical features. Surgical findings in the middle ear were similar among the patients. By next-generation and Sanger sequencing analyses, we identified two novel mutations, c.559C4G (p.P178A) and c.682T4A (p.C228S), in the SYM1 and atypical SYNS1 families, respectively. No pathogenic changes were found in the protein-coding regions, exon–intron boundaries or promoter regions of the NOG, GDF5 or FGF9 genes in the SABTT family. Such negative molecular data suggest there may be further genetic heterogeneity underlying SYNS1, with the involvement of at least one additional gene. Stapedotomy resulted in good hearing in all patients over the long term, indicating no correlation between genotype and surgical outcome. Given the overlap of the clinical features of these syndromes in our patients and the molecular findings, the diagnostic term ‘NOG-related-symphalangism spectrum disorder (NOG-SSD)’ is advocated and an unidentified gene may be responsible for this disorder. Journal of Human Genetics (2015) 60, 27–34; doi:10.1038/jhg.2014.97; published online 13 November 2014 INTRODUCTION However, as the GDF5 protein interacts with the NOG protein,14,15 Proximal symphalangism (SYM1) with conductive hearing loss was the diagnostic category of NOG-SSD does appear to be promising. -
BMPR2 Mutations in Pulmonary Arterial Hypertension with Congenital Heart Disease
Copyright #ERS Journals Ltd 2004 Eur Respir J 2004; 24: 371–374 European Respiratory Journal DOI: 10.1183/09031936.04.00018604 ISSN 0903-1936 Printed in UK – all rights reserved BMPR2 mutations in pulmonary arterial hypertension with congenital heart disease K.E. Roberts*, J.J. McElroy#, W.P.K. Wong*, E. Yen*, A. Widlitz}, R.J. Barst}, J.A. Knowles#,z,§, J.H. Morse* # } BMPR2 mutations in pulmonary arterial hypertension with congenital heart disease. Depts ofz *Medicine, Psychiatry, Pediatrics, K.E. Roberts, J.J. McElroy, W.P.K. Wong, E. Yen, A. Widlitz, R.J. Barst, J.A. Knowles, and the Columbia Genome Center, Columbia University College of Physicians and Surgeons, J.H. Morse. #ERS Journals Ltd 2004. § ABSTRACT: The aim of the present study was to determine if patients with both and the New York State Psychiatric Institute, New York, NY, USA. pulmonary arterial hypertension (PAH), due to pulmonary vascular obstructive disease, and congenital heart defects (CHD), have mutations in the gene encoding bone Correspondence: J.H. Morse, Dept of Medi- morphogenetic protein receptor (BMPR)-2. cine, Columbia University College of Physi- The BMPR2 gene was screened in two cohorts: 40 adults and 66 children with PAH/ cians and Surgeons, New York, NY, USA. CHD. CHDs were patent ductus arteriosus, atrial and ventricular septal defects, partial Fax: 1 2123054943 anomalous pulmonary venous return, transposition of the great arteries, atrioventicular E-mail: [email protected] canal, and rare lesions with systemic-to-pulmonary shunts. Six novel missense BMPR2 mutations were found in three out of four adults with Keywords: Bone morphogenetic protein receptor 2 mutations complete type C atrioventricular canals and in three children. -
ACVR1C Antibody Cat
ACVR1C Antibody Cat. No.: 4795 ACVR1C Antibody Specifications HOST SPECIES: Rabbit SPECIES REACTIVITY: Human, Mouse, Rat ACVR1C antibody was raised against a 15 amino acid synthetic peptide near the amino terminus of the human ACVR1C. IMMUNOGEN: The immunogen is located within amino acids 130 - 180 of ACVR1C. TESTED APPLICATIONS: ELISA, WB ACVR1C antibody can be used for detection of ACVR1C by Western blot at 1 and 2 μg/mL. APPLICATIONS: Antibody validated: Western Blot in human samples. All other applications and species not yet tested. SPECIFICITY: This antibody is predicted to have no cross-reactivity to ACVR1 or ACVR1B. POSITIVE CONTROL: 1) Cat. No. 1309 - Human Placenta Tissue Lysate Properties PURIFICATION: ACVR1C Antibody is affinity chromatography purified via peptide column. CLONALITY: Polyclonal September 25, 2021 1 https://www.prosci-inc.com/acvr1c-antibody-4795.html ISOTYPE: IgG CONJUGATE: Unconjugated PHYSICAL STATE: Liquid BUFFER: ACVR1C Antibody is supplied in PBS containing 0.02% sodium azide. CONCENTRATION: 1 mg/mL ACVR1C antibody can be stored at 4˚C for three months and -20˚C, stable for up to one STORAGE CONDITIONS: year. As with all antibodies care should be taken to avoid repeated freeze thaw cycles. Antibodies should not be exposed to prolonged high temperatures. Additional Info OFFICIAL SYMBOL: ACVR1 ACVR1C Antibody: FOP, ALK2, SKR1, TSRI, ACTRI, ACVR1A, ACVRLK2, Activin receptor ALTERNATE NAMES: type-1, Activin receptor type I, ACTR-I ACCESSION NO.: Q8NER5 PROTEIN GI NO.: 4501895 GENE ID: 90 USER NOTE: Optimal dilutions for each application to be determined by the researcher. Background and References ACVR1C Antibody: Activins are dimeric growth and differentiation factors which belong to the transforming growth factor-beta (TGF-beta) superfamily of structurally related signaling proteins.