CDX2, a Homeobox Transcription Factor, Upregulates Transcription of the P21/WAF1/CIP1 Gene
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ATRX Induction by Mutant Huntingtin Via Cdx2 Modulates Heterochromatin Condensation and Pathology in Huntington’S Disease
Cell Death and Differentiation (2012) 19, 1109–1116 & 2012 Macmillan Publishers Limited All rights reserved 1350-9047/12 www.nature.com/cdd ATRX induction by mutant huntingtin via Cdx2 modulates heterochromatin condensation and pathology in Huntington’s disease J Lee1,2, YK Hong3, GS Jeon4, YJ Hwang4, KY Kim4, KH Seong4, M-K Jung4, DJ Picketts5, NW Kowall1,2, KS Cho3 and H Ryu*,1,2,4 Aberrant chromatin remodeling is involved in the pathogenesis of Huntington’s disease (HD) but the mechanism is not known. Herein, we report that mutant huntingtin (mtHtt) induces the transcription of alpha thalassemia/mental retardation X linked (ATRX), an ATPase/helicase and SWI/SNF-like chromatin remodeling protein via Cdx-2 activation. ATRX expression was elevated in both a cell line model and transgenic model of HD, and Cdx-2 occupancy of the ATRX promoter was increased in HD. Induction of ATRX expanded the size of promyelocytic leukemia nuclear body (PML-NB) and increased trimethylation of H3K9 (H3K9me3) and condensation of pericentromeric heterochromatin, while knockdown of ATRX decreased PML-NB and H3K9me3 levels. Knockdown of ATRX/dXNP improved the hatch rate of fly embryos expressing mtHtt (Q127). ATRX/dXNP overexpression exacerbated eye degeneration of eye-specific mtHtt (Q127) expressing flies. Our findings suggest that transcriptional alteration of ATRX by mtHtt is involved in pericentromeric heterochromatin condensation and contributes to the pathogenesis of HD. Cell Death and Differentiation (2012) 19, 1109–1116; doi:10.1038/cdd.2011.196; published -
Prospective Isolation of NKX2-1–Expressing Human Lung Progenitors Derived from Pluripotent Stem Cells
The Journal of Clinical Investigation RESEARCH ARTICLE Prospective isolation of NKX2-1–expressing human lung progenitors derived from pluripotent stem cells Finn Hawkins,1,2 Philipp Kramer,3 Anjali Jacob,1,2 Ian Driver,4 Dylan C. Thomas,1 Katherine B. McCauley,1,2 Nicholas Skvir,1 Ana M. Crane,3 Anita A. Kurmann,1,5 Anthony N. Hollenberg,5 Sinead Nguyen,1 Brandon G. Wong,6 Ahmad S. Khalil,6,7 Sarah X.L. Huang,3,8 Susan Guttentag,9 Jason R. Rock,4 John M. Shannon,10 Brian R. Davis,3 and Darrell N. Kotton1,2 2 1Center for Regenerative Medicine, and The Pulmonary Center and Department of Medicine, Boston University School of Medicine, Boston, Massachusetts, USA. 3Center for Stem Cell and Regenerative Medicine, Brown Foundation Institute of Molecular Medicine, University of Texas Health Science Center, Houston, Texas, USA. 4Department of Anatomy, UCSF, San Francisco, California, USA. 5Division of Endocrinology, Diabetes and Metabolism, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, Massachusetts, USA. 6Department of Biomedical Engineering and Biological Design Center, Boston University, Boston, Massachusetts, USA. 7Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, Massachusetts, USA. 8Columbia Center for Translational Immunology & Columbia Center for Human Development, Columbia University Medical Center, New York, New York, USA. 9Department of Pediatrics, Monroe Carell Jr. Children’s Hospital, Vanderbilt University, Nashville, Tennessee, USA. 10Division of Pulmonary Biology, Cincinnati Children’s Hospital, Cincinnati, Ohio, USA. It has been postulated that during human fetal development, all cells of the lung epithelium derive from embryonic, endodermal, NK2 homeobox 1–expressing (NKX2-1+) precursor cells. -
Reciprocal Regulation of TEAD4 and CCN2 for the Trophectoderm Development of the Bovine Blastocyst
155 6 REPRODUCTIONRESEARCH Reciprocal regulation of TEAD4 and CCN2 for the trophectoderm development of the bovine blastocyst Hiroki Akizawa1,2, Ken Kobayashi3, Hanako Bai1, Masashi Takahashi1, Shinjiro Kagawa1, Hiroaki Nagatomo1,† and Manabu Kawahara1 1Laboratory of Animal Genetics and Reproduction, Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan, 2Japan Society for the Promotion of Science (JSPS Research Fellow), Tokyo, Japan and 3Laboratory of Cell and Tissue Biology, Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan Correspondence should be addressed to M Kawahara; Email: [email protected] †(Hiroaki Nagatomo is now at Department of Biotechnology, Faculty of Life and Environmental Science, University of Yamanashi, Kofu, Japan) Abstract The first segregation at the blastocyst stage is the symmetry-breaking event to characterize two cell components; namely, inner cell mass (ICM) and trophectoderm (TE). TEA domain transcription factor 4 (TEAD4) is a well-known regulator to determine TE properties of blastomeres in rodent models. However, the roles of bovine TEAD4 in blastocyst development have been unclear. We here aimed to clarify the mechanisms underlining TE characterization by TEAD4 in bovine blastocysts. We first found that the TEAD4 mRNA expression level was greater in TE than in ICM, which was further supported by TEAD4 immunofluorescent staining. Subsequently, we examined the expression patterns of TE-expressed genes; CDX2, GATA2 and CCN2, in the TEAD4-knockdown (KD) blastocysts. These expression levels significantly decreased in the TEAD4 KD blastocysts compared with controls. Of these downregulated genes, the CCN2 expression level decreased the most. We further analyzed the expression levels of TE-expressed genes; CDX2, GATA2 and TEAD4 in the CCN2 KD blastocysts. -
Regulation of the Tumor Suppressor Homeogene Cdx2 by Hnf4a in Intestinal Cancer
Oncogene (2013) 32, 3782–3788 & 2013 Macmillan Publishers Limited All rights reserved 0950-9232/13 www.nature.com/onc SHORT COMMUNICATION Regulation of the tumor suppressor homeogene Cdx2 by HNF4a in intestinal cancer T Saandi1,2, F Baraille3,4,5, L Derbal-Wolfrom1,2, A-L Cattin3,4,5, F Benahmed1,6, E Martin1,2, P Cardot3,4,5, B Duclos1,2,7, A Ribeiro3,4,5, J-N Freund1,2,8 and I Duluc1,2,8 The gut-specific homeotic transcription factor Cdx2 is a crucial regulator of intestinal development and homeostasis, which is downregulated in colorectal cancers (CRC) and exhibits a tumor suppressor function in the colon. We have previously established that several endodermal transcription factors, including HNF4a and GATA6, are involved in Cdx2 regulation in the normal gut. Here we have studied the role of HNF4a in the mechanism of deregulation of Cdx2 in colon cancers. Crossing ApcD14/ þ mice prone to spontaneous intestinal tumor development with pCdx2-9LacZ transgenic mice containing the LacZ reporter under the control of the 9.3-kb Cdx2 promoter showed that this promoter segment contains sequences recapitulating the decrease of Cdx2 expression in intestinal cancers. Immunohistochemistry revealed that HNF4a, unlike GATA6, exhibited a similar decrease to Cdx2 in genetic (Apcmin/ þ and ApcD14/ þ ) and chemically induced (Azoxymethane (AOM) treatment) models of intestinal tumors in mice. HNF4a and Cdx2 also exhibited a comparable deregulated pattern in human CRC. Correlated patterns were observed between HNF4a and Cdx2 in several experimental models of human colon cancer cell lines: xenografts in nude mice, wound healing and glucose starvation. -
Role of Cdx Factors in Early Mesodermal Fate Decisions Tanya E
© 2019. Published by The Company of Biologists Ltd | Development (2019) 146, dev170498. doi:10.1242/dev.170498 RESEARCH ARTICLE Role of Cdx factors in early mesodermal fate decisions Tanya E. Foley, Bradley Hess, Joanne G. A. Savory, Randy Ringuette and David Lohnes* ABSTRACT Cdx1−/− or Cdx2+/− phenotypes, indicative of functional overlap Murine cardiac and hematopoietic progenitors are derived from Mesp1+ between Cdx family members (Faas and Isaacs, 2009; Savory et al., mesoderm. Cdx function impacts both yolk sac hematopoiesis and 2011; van den Akker et al., 2002; van Nes et al., 2006; Young et al., Cdx2 cardiogenesis in zebrafish, suggesting that Cdx family members 2009). The derivation and analysis of conditional mutants regulate early mesoderm cell fate decisions. We found that Cdx2 (Savory et al., 2009a; Stringer et al., 2012) and compound mutant occupies a number of transcription factor loci during embryogenesis, derivatives (van den Akker et al., 2002; Savory et al., 2011; Verzi including key regulators of both cardiac and blood development, and et al., 2011; van Rooijen et al., 2012; Stringer et al., 2012; Grainger that Cdx function is required for normal expression of the cardiogenic et al., 2010; Hryniuk et al., 2012) further substantiated the transcription factors Nkx2-5 and Tbx5. Furthermore, Cdx and Brg1, an functional overlap between family members. Analysis of these ATPase subunit of the SWI/SNF chromatin remodeling complex, co- mutants also revealed a requirement for Cdx genes in diverse occupy a number of loci, suggesting that Cdx family members regulate processes in development and in the adult intestinal track. These target gene expression through alterations in chromatin architecture. -
CDX2 As a Useful Marker of Colorectal Adenocarcinoma Metastases to Lung in Pre-Operative Biopsy Specimens
87-92 1/6/07 12:56 Page 87 ONCOLOGY REPORTS 18: 87-92, 2007 87 CDX2 as a useful marker of colorectal adenocarcinoma metastases to lung in pre-operative biopsy specimens SHIGEBUMI TANAKA1, KANA SAITO1,2, TOMOKAZU ITO1, KOHEI TAJIMA3, AKIRA MOGI3, YOSHINORI SHITARA4, TAKAAKI SANO2 and HIROYUKI KUWANO1 Departments of 1General Surgical Science, 2Tumor Pathology, Gunma Graduate School of Medicine, 3-39-22 Showa-machi, Maebashi, Gunma 371-8511; 3Department of Surgery, Fujioka General Hospital, 942-1 Fujioka, Fujioka, Gunma 375-8503; 4Department of Surgery, Isesaki General Hospital, 12-1 Tsunatorihoncho, Isesaki, Gunma 372-0821, Japan Received January 12, 2007; Accepted April 17, 2007 Abstract. Although distinguishing metastatic colorectal as a solitary nodule. Differential diagnosis between metastatic adenocarcinoma from primary lung adenocarcinoma is often adenocarcinoma of colorectal origin and primary lung adeno- difficult, pre- or intra-operative identification is very important, carcinoma using imaging techniques such as chest computed as the resection areas for each diagnosis differ substantially. tomography (CT) is thus often difficult in patients with a CDX2, a recently cloned homeobox gene, represents a highly history of colorectal cancer. However, this differentiation is specific and sensitive marker of colorectal adenocarcinoma. crucial for therapeutic and prognostic purposes (1). Particularly We evaluated CDX2 expression using pre- and intra-operative in cases with operative indications, pre- or intra-operative biopsy specimens. The study examined 50 consecutive colo- identification is very important, as the resection areas differ rectal adenocarcinoma metastases to the lung, including 20 substantially between the diagnoses. If the tumor is a solitary biopsy specimens and 66 resected specimens, and 21 primary metastatic colorectal carcinoma to the lung, partial lung lung adenocarcinomas. -
ASCL2 Expression Contributes to Gastric Tumor Migration and Invasion by Downregulating Mir223 and Inducing EMT
MOLECULAR MEDICINE REPORTS 18: 3751-3759, 2018 ASCL2 expression contributes to gastric tumor migration and invasion by downregulating miR223 and inducing EMT QINGSONG ZUO*, JIE WANG*, CHAO CHEN, YONG ZHANG, DIAN-XU FENG, RONGHUA ZHAO and TENG CHEN Department of General Surgery, Putuo Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai 200062, P.R. China Received May 15, 2017; Accepted November 23, 2017 DOI: 10.3892/mmr.2018.9363 Abstract. Achaete-scute homolog 2 (ASCL2), a basic results of the present study demonstrated that ASCL2 was able helix-loop-helix transcription factor, serves an essential role in to downregulate the expression level of miR223, contribute to the maintenance of adult intestinal stem cells and the growth EMT and promote gastric tumor metastasis, which indicated of gastric cancer (GC). However, the function of ASCL2 in that ASCL2 may serve as a therapeutic target in the treatment the metastasis of GC is poorly understood. The present study of GC. aimed to evaluate the effect of ASCL2 expression on gastric tumor metastasis. ASCL2 protein expression was detected in Introduction 32 cases of gastric metastasis and its relevant primary tumors using western blotting and immunohistochemistry. The Gastric cancer (GC) is the second most common cause of data suggested that the expression of ASCL2 was highest in cancer-associated mortality in the world, and the incidence metastatic tumors, among adjacent normal tissues, primary GC is highest in East Asia, Eastern Europe and parts of Latin gastric tumors and gastric metastatic tumors. Furthermore, America (1,2). However, the precise mechanisms underlying ASCL2-overexpressing GC cell lines MKN1-ASCL2 and gastric carcinogenesis are not yet completely understood (3). -
Isolation and Characterization of BEN, a Member of the TFII-I Family of DNA-Binding Proteins Containing Distinct Helix–Loop–Helix Domains
Isolation and characterization of BEN, a member of the TFII-I family of DNA-binding proteins containing distinct helix–loop–helix domains Dashzeveg Bayarsaihan and Frank H. Ruddle* Department of Molecular, Cellular, and Developmental Biology, Kline Biology Tower, Yale University, 266 Whitney Avenue, New Haven, CT 06520 Contributed by Frank H. Ruddle, May 4, 2000 The transcriptional regulation of the Hoxc8 gene is controlled during paraxial mesoderm at the 14th somite, and in the lateral plate early mouse embryogenesis by an enhanceosome-like control region, mesoderm at the 12th somite. Later in development, posterior termed the early enhancer (EE), located 3 kb upstream from the Hoxc8 expression of Hoxc8 decreases, whereas intense expression is translation start site. The EE is involved in establishing the posterior maintained at previously determined anterior limits within the expression pattern of Hoxc8 at embryonic day (E) 8.5–9.0. Genetic and thorax (somites and lateral plate mesoderm) and in the brachial biochemical data have shown that nuclear factors interact with this region (neural tube) (7). region in a sequence-specific manner. We have used a yeast one- Transgenic reporter analysis was used to identify cis-regulatory hybrid screen in a search for transcription factors that bind to EE domains critical for the normal expression of Hoxc8. Two distinct motifs and have isolated a novel murine DNA-binding protein, termed genomic regions were identified that regulate the early and late BEN (binding factor for early enhancer). The ORF of BEN encodes a phases of Hoxc8 expression (5, 6). The early phase is regulated by protein of 1072 amino acids and contains six helix–loop–helix do- DNA elements located 3 kb upstream from the translation start site mains, a hydrophobic leucine zipper-like motif, and a serine-rich of the gene, whereas the late expression is regulated by elements repeat. -
The Human Gene Map for Performance and Health-Related Fitness Phenotypes: the 2006–2007 Update
BASIC SCIENCES The Human Gene Map for Performance and Health-Related Fitness Phenotypes: The 2006–2007 Update MOLLY S. BRAY1, JAMES M. HAGBERG2, LOUIS PE´ RUSSE3, TUOMO RANKINEN4, STEPHEN M. ROTH2, BERND WOLFARTH5, and CLAUDE BOUCHARD4 1USDA/ARS Children’s Nutrition Research Center, Baylor College of Medicine, Houston, TX; 2Department of Kinesiology, School of Public Health, University of Maryland, College Park, MD; 3Division of Kinesiology, Department of Preventive Medicine, Laval University, Ste-Foy, Que´bec, CANADA; 4Human Genomics Laboratory, Pennington Biomedical Research Center, Baton Rouge, LA; and 5Preventive and Rehabilitative Sports Medicine, Technical University Munich, Munich, GERMANY ABSTRACT BRAY, M. S., J. M. HAGBERG, L. PE´ RUSSE, T. RANKINEN, S. M. ROTH, B. WOLFARTH, and C. BOUCHARD. The Human Gene Map for Performance and Health-Related Fitness Phenotypes: The 2006–2007 Update. Med. Sci. Sports Exerc., Vol. 41, No. 1, pp. 34–72, 2009. This update of the human gene map for physical performance and health-related fitness phenotypes covers the research advances reported in 2006 and 2007. The genes and markers with evidence of association or linkage with a performance or a fitness phenotype in sedentary or active people, in responses to acute exercise, or for training-induced adaptations are positioned on the map of all autosomes and sex chromosomes. Negative studies are reviewed, but a gene or a locus must be supported by at least one positive study before being inserted on the map. A brief discussion on the nature of the evidence and on what to look for in assessing human genetic studies of relevance to fitness and performance is offered in the introduction, followed by a review of all studies published in 2006 and 2007. -
Genome-Wide DNA Methylation Analysis Reveals Molecular Subtypes of Pancreatic Cancer
www.impactjournals.com/oncotarget/ Oncotarget, 2017, Vol. 8, (No. 17), pp: 28990-29012 Research Paper Genome-wide DNA methylation analysis reveals molecular subtypes of pancreatic cancer Nitish Kumar Mishra1 and Chittibabu Guda1,2,3,4 1Department of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, NE, 68198, USA 2Bioinformatics and Systems Biology Core, University of Nebraska Medical Center, Omaha, NE, 68198, USA 3Department of Biochemistry and Molecular Biology, University of Nebraska Medical Center, Omaha, NE, 68198, USA 4Fred and Pamela Buffet Cancer Center, University of Nebraska Medical Center, Omaha, NE, 68198, USA Correspondence to: Chittibabu Guda, email: [email protected] Keywords: TCGA, pancreatic cancer, differential methylation, integrative analysis, molecular subtypes Received: October 20, 2016 Accepted: February 12, 2017 Published: March 07, 2017 Copyright: Mishra et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC-BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. ABSTRACT Pancreatic cancer (PC) is the fourth leading cause of cancer deaths in the United States with a five-year patient survival rate of only 6%. Early detection and treatment of this disease is hampered due to lack of reliable diagnostic and prognostic markers. Recent studies have shown that dynamic changes in the global DNA methylation and gene expression patterns play key roles in the PC development; hence, provide valuable insights for better understanding the initiation and progression of PC. In the current study, we used DNA methylation, gene expression, copy number, mutational and clinical data from pancreatic patients. -
Expression Pattern of the Class I Homeobox Genes in Ovarian Carcinoma
J Gynecol Oncol Vol. 21, No. 1:29-37, March 2010 DOI:10.3802/jgo.2010.21.1.29 Original Article Expression pattern of the class I homeobox genes in ovarian carcinoma Jin Hwa Hong1, Jae Kwan Lee1, Joong Jean Park2, Nak Woo Lee1, Kyu Wan Lee1, Jung Yeol Na1 Departments of 1Obstetrics and Gynecology, 2Physiology, Korea University College of Medicine, Seoul, Korea Objective: Although some sporadic reports reveal the link between the homeobox (HOX) genes and ovarian carcinoma, there is no comprehensive analysis of the expression pattern of the class I homeobox genes in ovarian carcinoma that determines the candidate genes involved in ovarian carcinogenesis. Methods: The different patterns of expression of 36 HOX genes were analyzed, including 4 ovarian cancer cell lines and 4 normal ovarian tissues. Using a reverse transcription-polymerase chain reaction (RT-PCR) and quantification analysis, the specific gene that showed a significantly higher expression in ovarian cancer cell lines than in normal ovaries was selected, and western blot analysis was performed adding 7 ovarian cancer tissue specimens. Finally, immunohistochemical and immunocytochemical analyses were performed to compare the pattern of expression of the specific HOX gene between ovarian cancer tissue and normal ovaries. Results: Among 36 genes, 11 genes had a different level of mRNA expression between the cancer cell lines and the normal ovarian tissues. Of the 11 genes, only HOXB4 had a significantly higher level of expression in ovarian cancer cell lines than in normal ovaries (p=0.029). Based on western blot, immunohistochemical, and immunocytochemical analyses, HOXB4 was expressed exclusively in the ovarian cancer cell lines or cancer tissue specimens, but not in the normal ovaries. -
Adjusting the Molecular Clock: the Importance of Circadian Rhythms in the Development of Glioblastomas and Its Intervention As a Therapeutic Strategy
International Journal of Molecular Sciences Review Adjusting the Molecular Clock: The Importance of Circadian Rhythms in the Development of Glioblastomas and Its Intervention as a Therapeutic Strategy Paula M. Wagner 1,2,†,César G. Prucca 1,2,† , Beatriz L. Caputto 1,2 and Mario E. Guido 1,2,* 1 CIQUIBIC-CONICET, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Córdoba 5000, Argentina; [email protected] (P.M.W.); [email protected] (C.G.P.); [email protected] (B.L.C.) 2 Departamento de Química Biológica Ranwel Caputto, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Córdoba 5000, Argentina * Correspondence: [email protected] † Equal contribution. Abstract: Gliomas are solid tumors of the central nervous system (CNS) that originated from different glial cells. The World Health Organization (WHO) classifies these tumors into four groups (I-IV) with increasing malignancy. Glioblastoma (GBM) is the most common and aggressive type of brain tumor classified as grade IV. GBMs are resistant to conventional therapies with poor prognosis after diagnosis even when the Stupp protocol that combines surgery and radiochemotherapy is applied. Nowadays, few novel therapeutic strategies have been used to improve GBM treatment, looking for higher efficiency and lower side effects, but with relatively modest results. The circadian timing system temporally organizes the physiology and behavior of most organisms and daily regulates several cellular processes in organs, tissues, and even in individual cells, including tumor cells. The Citation: Wagner, P.M.; Prucca, C.G.; Caputto, B.L.; Guido, M.E. Adjusting potentiality of the function of the circadian clock on cancer cells modulation as a new target for novel the Molecular Clock: The Importance treatments with a chronobiological basis offers a different challenge that needs to be considered in of Circadian Rhythms in the further detail.