In Red Those Papers That Are Part of the Exam (I.E. One Question Will Be To

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In Red Those Papers That Are Part of the Exam (I.E. One Question Will Be To

Readings Cotranscriptional RNA processing • The C‐terminal domain of RNA polymerase II couples mRNA processing to transcription.McCracken S, Fong N, Yankulov K, Ballantyne S, Pan G, Greenblatt J, Patterson SD, Wickens M, Bentley DL.Nature. 1997 Jan 23;385(6614):357‐61. • An extensive network of coupling among gene expression machines.Maniatis T, Reed R.Nature. 2002 Apr 4;416(6880): 499‐506. Review. • Curr Opin Cell Biol. 2005 Jun;17(3):262‐8.Promoter usage and alternative splicing.Kornblihtt AR. In red those papers that are part of the exam (i.e. one question will be to comment a figure) Readings pre mRNA splicing • Mechanism of Alternative pre mRNA splicing Douglas Black Annu Rev Biochem 2003 • Another step forward for SELEXive splicing.Buratti E, Baralle FE.Trends Mol Med. 2005 Jan;11(1):5‐9. Review. • Listening to silence and understanding nonsense: exonic mutations that affect splicing.Cartegni L, Chew SL, Krainer AR. Nat Rev Genet. 2002 Apr;3 (4):285‐98 • Determinants of SR protein specificity.Tacke R, Manley JL.Curr Opin Cell Biol. 1999 Jun;11(3):358‐62. Review. • Nat Struct Mol Biol. 2009 Sep;16(9):902‐3.When chromatin meets splicing.Kornblihtt AR, Schor IE, Allo M, Blencowe BJ. In red those papers that are part of the exam (i.e. one question will be to comment a figure) Readings polyA and RNA editing • HITS‐CLIP yields genome‐wide insights into brain alternative RNA processing. Licatalosi DD, et al (The CLIP identify NOVA as regulator of Alterantive PolyAdenilation) • Mechanisms and consequences of alternative polyadenylation.Di Giammartino DC, Nishida K, Manley JL.Mol Cell. 2011 Sep 16;43(6):853‐66. • Molecular diversity through RNA editing: a balancing act.Farajollahi S, Maas S.Trends Genet. 2010 May;26(5):221‐30. Epub 2010 Apr 13. Review. In red those papers that are part of the exam (i.e. one question will be to comment a figure of these papers) Readings • MMo Chen and James L. Manley. Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches NATURE REVIEwS ,Molecular cell Biology , 10, 2009, 741. • Nilsen TW, Graveley BR. Expansion of the eukaryotic proteome by alternative splicing. Nature. 2010 Jan 28;463(7280):457‐63. • Ule J, Jensen KB, Ruggiu M, Mele A, Ule A, Darnell RB. CLIP identifies Nova‐regulated RNA networks in the brain. Science. 2003 Nov 14;302(5648):1212‐5. • Anna Corrionero and Juan Valcarcel Molecular. Cell 36, December 24, 2009 (News and Views on CLIP assays) • Alberto Kornblihtt. Promoter usage and alternative splicing . Current Opinion Cell Biol 2005 17:262‐268. • Nature Structural & Molecular Biology 16, 902 ‐ 903 (2009) When chromatin meets splicing Kornblihtt A. et al • Nature. 2008 Nov 27;456(7221):464‐9 HITS‐CLIP yields genome‐wide insights into brain alternative RNA processing. Licatalosi DD, et al (The CLIP identify NOVA as regulator of Alterantive PolyAdenilation) In red those papers that are part of the exam (i.e. one question will be to comment a figure) .

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SRSF1 Splicing by Transcription Dynamics
T Cell Activation Regulates CD6 Alternative Splicing by Transcription Dynamics and SRSF1 This information is current as Vânia G. da Glória, Mafalda Martins de Araújo, Ana of June 23, 2014. Mafalda Santos, Rafaela Leal, Sérgio F. de Almeida, Alexandre M. Carmo and Alexandra Moreira J Immunol 2014; 193:391-399; Prepublished online 2 June 2014; Downloaded from doi: 10.4049/jimmunol.1400038 http://www.jimmunol.org/content/193/1/391 Supplementary http://www.jimmunol.org/content/suppl/2014/05/31/jimmunol.140003 http://www.jimmunol.org/ Material 8.DCSupplemental.html References This article cites 67 articles, 30 of which you can access for free at: http://www.jimmunol.org/content/193/1/391.full#ref-list-1 Subscriptions Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscriptions by Alexandre Carmo on June 23, 2014 Permissions Submit copyright permission requests at: http://www.aai.org/ji/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/cgi/alerts/etoc The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 9650 Rockville Pike, Bethesda, MD 20814-3994. Copyright © 2014 by The American Association of Immunologists, Inc. All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. The Journal of Immunology T Cell Activation Regulates CD6 Alternative Splicing by Transcription Dynamics and SRSF1 Vaˆnia G. da Glo´ria,* Mafalda Martins de Arau´jo,†,‡,x Ana Mafalda Santos,† Rafaela Leal,* Se´rgio F. de Almeida,{ Alexandre M. Carmo,†,‖ and Alexandra Moreira* The T cell-surface glycoprotein CD6 is a modulator of cellular responses and has been implicated in several autoimmune diseases such as multiple sclerosis, rheumatoid arthritis, and psoriasis.
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