Ameloblastin and Amelogenin Expression in Posnatal Developing Mouse Molars
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Human Identification by Amelogenin Test in Libyans
American Journal of www.biomedgrid.com Biomedical Science & Research ISSN: 2642-1747 --------------------------------------------------------------------------------------------------------------------------------- Research Article Copyright@ Samir Elmrghni Human Identification by Amelogenin Test in Libyans Samir Elmrghni* and Mahmoud Kaddura Department of Forensic Medicine and Toxicology, University of Benghazi, Libya *Corresponding author: Samir Elmrghni, Faculty of Medicine, Department of Forensic Medicine and Toxicology, University of Benghazi-Libya, Benghazi, Libya. To Cite This Article: Samir Elmrghni. Human Identification by Amelogenin Test in Libyans. Am J Biomed Sci & Res. 2019 - 3(6). AJBSR. MS.ID.000737. DOI: 10.34297/AJBSR.2019.03.000737 Received: May 25, 2019 | Published: July 11, 2019 Abstract Sex typing is essential in medical diagnosis of sex-linked disease and forensic science. Gender for criminal evidence of offender is usually as reported the anomalous amelogenin results of 2 male samples (out of 238 males) represented as females (Y deletions) and another 2 samples the initial information for investigation. For individualization, identification of gender is performed in addition to the STR markers recently. We amelogenin results of the controversial samples, DNA was further used in SRY and Y-STR typing. All samples typed as males but two showed with with (X deletions) in Benghazi (Libya). The frequency in both was about 0.8%. Higher than those of the other populations reported. To confirm X chromosomes. From the results, it was highly suggested that for the controversial cases of human gender identification with amelogenin tests, amplificationKeywords: Amelogenin; of SRY gene Libyans or/and Y-STR markers will be adopted to confirm the gender [1]. Introduction gene (AMG) was precisely mapped in the p22 region on the X systems used to determine if the sample being tested is of male gene was first isolated and sequenced [2]. -
Tooth Enamel and Its Dynamic Protein Matrix
International Journal of Molecular Sciences Review Tooth Enamel and Its Dynamic Protein Matrix Ana Gil-Bona 1,2,* and Felicitas B. Bidlack 1,2,* 1 The Forsyth Institute, Cambridge, MA 02142, USA 2 Department of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115, USA * Correspondence: [email protected] (A.G.-B.); [email protected] (F.B.B.) Received: 26 May 2020; Accepted: 20 June 2020; Published: 23 June 2020 Abstract: Tooth enamel is the outer covering of tooth crowns, the hardest material in the mammalian body, yet fracture resistant. The extremely high content of 95 wt% calcium phosphate in healthy adult teeth is achieved through mineralization of a proteinaceous matrix that changes in abundance and composition. Enamel-specific proteins and proteases are known to be critical for proper enamel formation. Recent proteomics analyses revealed many other proteins with their roles in enamel formation yet to be unraveled. Although the exact protein composition of healthy tooth enamel is still unknown, it is apparent that compromised enamel deviates in amount and composition of its organic material. Why these differences affect both the mineralization process before tooth eruption and the properties of erupted teeth will become apparent as proteomics protocols are adjusted to the variability between species, tooth size, sample size and ephemeral organic content of forming teeth. This review summarizes the current knowledge and published proteomics data of healthy and diseased tooth enamel, including advancements in forensic applications and disease models in animals. A summary and discussion of the status quo highlights how recent proteomics findings advance our understating of the complexity and temporal changes of extracellular matrix composition during tooth enamel formation. -
Amelogenin Gene Influence on Enamel Defects of Cleft Lip and Palate Patients
ORIGINAL RESEARCH Genetic and Molecular Biology Amelogenin gene influence on enamel defects of cleft lip and palate patients Abstract: The aim of this study was to investigate the occurrence of mutations in the amelogenin gene (AMELX) in patients with cleft lip Fernanda Veronese OLIVEIRA(a) Thiago José DIONÍSIO(b) and palate (CLP) and enamel defects (ED). A total of 165 patients were Lucimara Teixeira NEVES(b) divided into four groups: with CLP and ED (n=46), with CLP and with- Maria Aparecida Andrade out ED (n = 34), without CLP and with ED (n = 34), and without CLP Moreira MACHADO(a) Carlos Ferreira SANTOS(b) or ED (n = 51). Genomic DNA was extracted from saliva followed by Thais Marchini OLIVEIRA(a) conducting a Polymerase Chain Reaction and direct DNA sequencing of exons 2 through 7 of AMELX. Mutations were found in 30% (n = 14), (a) Department of Pediatric Dentistry, 35% (n = 12), 11% (n = 4) and 13% (n = 7) of the subjects from groups 1, 2, Orthodontics and Community Health, Bauru 3 and 4, respectively. Thirty seven mutations were detected and distrib- School of Dentistry, University of São Paulo, Bauru, SP, Brazil. uted throughout exons 2 (1 mutation – 2.7%), 6 (30 mutations – 81.08%) and 7 (6 mutations – 16.22%) of AMELX. No mutations were found in (b) Department of Biological Sciences, Bauru School of Dentistry, University of São Paulo, exons 3, 4 or 5. Of the 30 mutations found in exon 6, 43.34% (n = 13), Bauru, SP, Brazil. 23.33% (n = 7), 13.33% (n = 4) and 20% (n = 6) were found in groups 1, 2, 3 and 4, respectively. -
United States Patent (19) 11 Patent Number: 5,876,942 Cheng Et Al
USOO5876942A United States Patent (19) 11 Patent Number: 5,876,942 Cheng et al. (45) Date of Patent: Mar. 2, 1999 54 PROCESS FOR SEXING COW EMBRYOS Gibson et al., Biochemistry 30:1075–1079 (1991). 75 Inventors: Winston Teng-Kuei Cheng, Taipei; Shimokawa et al., J. of Biological Chemistry 262(9) : Chuan-Mu Chen, Tai Chung; Che-Lin 4042–4047 (1987). Hu, Taipei; Chih-Hua Wang, Taipei; Schafer et al., BioEssays 18(12):955-962 (1996). Kong-Bung Choo, Taipei, all of Taiwan Sullivan et al., BioTechniques 15(4):636-641 (1993). 73 Assignee: National Science Council of Republic Ennis et al., Animal Genetics 25:425-427 (1994). of China, Taipei, Taiwan Primary Examiner W. Gary Jones 21 Appl. No.: 899,811 ASSistant Examiner Ethan Whisenant Attorney, Agent, or Firm-Bacon & Thomas 22 Filed: Jul. 24, 1997 57 ABSTRACT 51) Int. Cl. ............................. C12Q 1/68; CO7H 21/02; CO7H 21/04 A rapid, highly reproducible and Sensitive technique has 52 U.S. Cl. ............................... 435/6; 536/231; 536/24.3 been Successfully developed for Sexing the cow embryos, by 58 Field of Search ................................ 435/6; 536/23.1, method of polymerase chain reaction (PCR) against the 536/24.3;985/77, 78 amelogenin (bAML) genes located on both X- and Y-chromosomes of the Holstein dairy cattle. Results from 56) References Cited DNA sequence analysis showed that there was only 45% homology between the intron 5 of AMLX and AMLY genes. U.S. PATENT DOCUMENTS Based on these Sequences a pair of Sex-Specific primers, 5,578,449 11/1996 Frasch et al. -
Implications of Male Amelogenin Dropouts in Forensics
Research Article J Forensic Sci & Criminal Inves Volume 15 Issue 2 - February 2021 Copyright © All rights are reserved by Anand Kumar DOI: 10.19080/JFSCI.2021.15.555908 Implications of Male Amelogenin Dropouts in Forensics Anand Kumar* DNA Division, State Forensic Science Laboratory, India Submission: February 06, 2021; Published: February 22, 2021 *Corresponding author: Anand Kumar, DNA Division, State Forensic Science Laboratory, Rajasthan, 302016, (INDIA) Abstract In forensic science STR loci are useful tools for reconstructing male lineages, paternity testing, forensic investigations, and population The samples used in this study were received at State Forensic Science Laboratory for routine examination. A combination of autosomal (Power Plexgenomics.®- Fusion They 5C cover system a widekit) and range Y-STR of genome-specific(Power Plex®- Y23 geographical system kit) distributions multiplexing duesystems to shortfall was used of forrecombination the genotyping during of the spermatogenesis. samples as per the manufacturer’s protocol. In electropherogram of male samples, male-derived amelogenin marker was not observed in the results of Power Plex®- Fusion 5C system kit. These samples were further analyzed by Power Plex®- Y23 system kit and a complete set of 23 Y STR markers was obtained. The failure rate of detection of amelogenin marker in Indian population is 0.23%. This clearly indicates the deletion in the short arm of Y chromosome related to amelogenin marker. Keywords: Amelogenin marker; Forensic genetics; Haplogroups; Deletion Introduction DNA analysis based on autosomal as well as sex chromosome STR is routinely used in forensic casework, population studies, identification [6], Thangaraj et al [7], reported 1.85% failure in Southern hybridization [5]. -
Bioinformatics Analysis Reveals Genes Involved in the Pathogenesis of Ameloblastoma and Keratocystic Odontogenic Tumor
IJMCM Original Article Autumn 2016, Vol 5, No 4 Bioinformatics Analysis Reveals Genes Involved in the Pathogenesis of Ameloblastoma and Keratocystic Odontogenic Tumor Eliane Macedo Sobrinho Santos1,2, Hércules Otacílio Santos3, Ivoneth dos Santos Dias4, Sérgio Henrique Santos5, Alfredo Maurício Batista de Paula1, John David Feltenberger6, André Luiz Sena Guimarães1, Lucyana Conceição Farias¹ 1. Department of Dentistry, Universidade Estadual de Montes Claros, Minas Gerais, Brazil. 2. Instituto Federal do Norte de Minas Gerais-Campus Araçuaí, Minas Gerais, Brazil. 3. Instituto Federal do Norte de Minas Gerais-Campus Salinas, Minas Gerais, Brazil. 4. Department of Biology, Universidade Estadual de Montes Claros, Minas Gerais, Brazil. 5. Department of Pharmacology, Universidade Federal de Minas Gerais, Brazil. 6. Texas Tech University Health Science Center, Lubbock, TX, USA. Submmited 10 August 2016; Accepted 10 October 2016; Published 6 Decemmber 2016 Pathogenesis of odontogenic tumors is not well known. It is important to identify genetic deregulations and molecular alterations. This study aimed to investigate, through bioinformatic analysis, the possible genes involved in the pathogenesis of ameloblastoma (AM) and keratocystic odontogenic tumor (KCOT). Genes involved in the pathogenesis of AM and KCOT were identified in GeneCards. Gene list was expanded, and the gene interactions network was mapped using the STRING software. “Weighted number of links” (WNL) was calculated to identify “leader genes” (highest WNL). Genes were ranked by K-means method and Kruskal- Wallis test was used (P<0.001). Total interactions score (TIS) was also calculated using all interaction data generated by the STRING database, in order to achieve global connectivity for each gene. The topological and ontological analyses were performed using Cytoscape software and BinGO plugin. -
New Directions in Cariology Research 2011
International Journal of Dentistry New Directions in Cariology Research 2011 Guest Editors: Alexandre R. Vieira, Marilia Buzalaf, and Figen Seymen New Directions in Cariology Research 2011 International Journal of Dentistry New Directions in Cariology Research 2011 Guest Editors: Alexandre R. Vieira, Marilia Buzalaf, and Figen Seymen Copyright © 2012 Hindawi Publishing Corporation. All rights reserved. This is a special issue published in “International Journal of Dentistry.” All articles are open access articles distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Editorial Board Ali I. Abdalla, Egypt Nicholas Martin Girdler, UK Getulio Nogueira-Filho, Canada Jasim M. Albandar, USA Rosa H. Grande, Brazil A. B. M. Rabie, Hong Kong Eiichiro . Ariji, Japan Heidrun Kjellberg, Sweden Michael E. Razzoog, USA Ashraf F. Ayoub, UK Kristin Klock, Norway Stephen Richmond, UK John D. Bartlett, USA Manuel Lagravere, Canada Kamran Safavi, USA Marilia A. R. Buzalaf, Brazil Philip J. Lamey, UK L. P. Samaranayake, Hong Kong Francesco Carinci, Italy Daniel M. Laskin, USA Robin Seymour, UK Lim K. Cheung, Hong Kong Louis M. Lin, USA Andreas Stavropoulos, Denmark BrianW.Darvell,Kuwait A. D. Loguercio, Brazil Dimitris N. Tatakis, USA J. D. Eick, USA Martin Lorenzoni, Austria Shigeru Uno, Japan Annika Ekestubbe, Sweden Jukka H. Meurman, Finland Ahmad Waseem, UK Vincent Everts, The Netherlands Carlos A. Munoz-Viveros, USA Izzet Yavuz, -
The Pitx2:Mir-200C/141:Noggin Pathway Regulates Bmp Signaling
3348 RESEARCH ARTICLE STEM CELLS AND REGENERATION Development 140, 3348-3359 (2013) doi:10.1242/dev.089193 © 2013. Published by The Company of Biologists Ltd The Pitx2:miR-200c/141:noggin pathway regulates Bmp signaling and ameloblast differentiation Huojun Cao1,*, Andrew Jheon2,*, Xiao Li1, Zhao Sun1, Jianbo Wang1, Sergio Florez1, Zichao Zhang1, Michael T. McManus3, Ophir D. Klein2,4 and Brad A. Amendt1,5,‡ SUMMARY The mouse incisor is a remarkable tooth that grows throughout the animal’s lifetime. This continuous renewal is fueled by adult epithelial stem cells that give rise to ameloblasts, which generate enamel, and little is known about the function of microRNAs in this process. Here, we describe the role of a novel Pitx2:miR-200c/141:noggin regulatory pathway in dental epithelial cell differentiation. miR-200c repressed noggin, an antagonist of Bmp signaling. Pitx2 expression caused an upregulation of miR-200c and chromatin immunoprecipitation assays revealed endogenous Pitx2 binding to the miR-200c/141 promoter. A positive-feedback loop was discovered between miR-200c and Bmp signaling. miR-200c/141 induced expression of E-cadherin and the dental epithelial cell differentiation marker amelogenin. In addition, miR-203 expression was activated by endogenous Pitx2 and targeted the Bmp antagonist Bmper to further regulate Bmp signaling. miR-200c/141 knockout mice showed defects in enamel formation, with decreased E-cadherin and amelogenin expression and increased noggin expression. Our in vivo and in vitro studies reveal a multistep transcriptional program involving the Pitx2:miR-200c/141:noggin regulatory pathway that is important in epithelial cell differentiation and tooth development. -
Amelogenin X Linked Chromosome
International Journal of Research in Medical Sciences Gupta B. Int J Res Med Sci. 2017 Oct;5(10):4214-4222 www.msjonline.org pISSN 2320-6071 | eISSN 2320-6012 DOI: http://dx.doi.org/10.18203/2320-6012.ijrms20174549 Review Article Amelogenin x linked chromosome Bhawani Gupta* Department of Oral Pathology, Saveetha University, Chennai, Tamil Nadu, India Received: 29 June 2017 Revised: 20 August 2017 Accepted: 21 August 2017 *Correspondence: Dr. Bhawani Gupta, E-mail: [email protected] Copyright: © the author(s), publisher and licensee Medip Academy. This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. ABSTRACT The AMELX gene provides instructions for making a protein called amelogenin, which is essential for normal tooth development. Amelogenin is involved in the formation of enamel, which is the hard, white material that forms the protective outer layer of each tooth. Using molecular genetic techniques, we have shown that there is no evidence that the AMGX gene is deleted in this case of the Nance-Horan syndrome. In affected members of a Michigan kindred of Eastern European ancestry segregating X-linked amelogenesis imperfecta with a characteristic snow-capped enamel phenotype. Keywords: Amelogenin, Chromosome, Hormone INTRODUCTION degradation by Proteolytic enzymes like matrix mettaloproteinases into smaller low molecular weight The AMELX gene provides instructions for making a fragments, like tyrosine rich amelogenin protein and protein called amelogenin, which is essential for normal leucine rich amelogenin polypeptide which are suggested tooth development. -
The Spotted Gar Genome Illuminates Vertebrate Evolution and Facilitates Human-To-Teleost Comparisons
Europe PMC Funders Group Author Manuscript Nat Genet. Author manuscript; available in PMC 2016 September 22. Published in final edited form as: Nat Genet. 2016 April ; 48(4): 427–437. doi:10.1038/ng.3526. Europe PMC Funders Author Manuscripts The spotted gar genome illuminates vertebrate evolution and facilitates human-to-teleost comparisons A full list of authors and affiliations appears at the end of the article. Abstract To connect human biology to fish biomedical models, we sequenced the genome of spotted gar (Lepisosteus oculatus), whose lineage diverged from teleosts before the teleost genome duplication (TGD). The slowly evolving gar genome conserved in content and size many entire chromosomes from bony vertebrate ancestors. Gar bridges teleosts to tetrapods by illuminating the evolution of immunity, mineralization, and development (e.g., Hox, ParaHox, and miRNA genes). Numerous conserved non-coding elements (CNEs, often cis-regulatory) undetectable in direct human-teleost comparisons become apparent using gar: functional studies uncovered conserved roles of such cryptic CNEs, facilitating annotation of sequences identified in human genome-wide association studies. Transcriptomic analyses revealed that the sum of expression domains and levels from duplicated teleost genes often approximate patterns and levels of gar genes, consistent with subfunctionalization. The gar genome provides a resource for understanding evolution after genome duplication, the origin of vertebrate genomes, and the function of human regulatory sequences. Europe PMC Funders Author Manuscripts Keywords GWAS; comparative medicine; polyploidy; zebrafish; medaka; neofunctionalization Teleost fish represent about half of all living vertebrate species1 and provide important models for human disease (e.g. zebrafish and medaka)2-9. -
Novel Biological Activity of Ameloblastin in Enamel Matrix Derivative
www.scielo.br/jaos http://dx.doi.org/10.1590/1678-775720140291 Novel biological activity of ameloblastin in enamel matrix derivative Sachiko KURAMITSU-FUJIMOTO1, Wataru ARIYOSHI2, Noriko SAITO3, Toshinori OKINAGA2, Masaharu KAMO4, Akira ISHISAKI4, Takashi TAKATA5, Kazunori YAMAGUCHI1, Tatsuji NISHIHARA2 1- Division of Orofacial Functions and Orthodontics, Department of Growth Development of Functions, Kyushu Dental University, Fukuoka, Japan. 2- Division of Infections and Molecular Biology, Department of Health Promotion, Kyushu Dental University, Fukuoka, Japan. 3- Division of Pulp Biology, Operative Dentistry and Endodontics, Department of Cariology and Periodontology, Kyushu Dental University, Fukuoka, Japan. 4- Division of Cellular Biosignal Sciences, Department of Biochemistry, Iwate Medical University, Iwate, Japan. 5- Department of Oral and Maxillofacial Pathobiology, Institute of Biomedical and Health Sciences, Hiroshima University, Hiroshima, Japan. Corresponding address: Tatsuji Nishihara - Division of Infections and Molecular Biology, Department of Health Promotion, Kyushu Dental University - 2-6-1 Manazuru - Kokurakita-ku - Kitakyushu - Fukuoka - 803-8580 - Japan - Phone: +81 93 285 3050 - fax: +81 93 581 4984 - e-mail: [email protected] Submitted: July 24, 2014 - Modification: October 24, 2014 - Accepted: October 27, 2014 ABSTRACT bjective: Enamel matrix derivative (EMD) is used clinically to promote periodontal Otissue regeneration. However, the effects of EMD on gingival epithelial cells during regeneration of periodontal tissues are unclear. In this in vitro study, we purified ameloblastin from EMD and investigated its biological effects on epithelial cells. Material and Methods: Bioactive fractions were purified from EMD by reversed-phase high-performance liquid chromatography using hydrophobic support with a C18 column. The mouse gingival epithelial cell line GE-1 and human oral squamous cell carcinoma line SCC-25 were treated with purified EMD fraction, and cell survival was assessed with a WST-1 assay. -
Polymerase Chain Reaction (PCR)-Based Sex Determination Using Unembalmed Human Cadaveric Skeletal Fragments from Sokoto, Northwestern Nigeria
IOSR Journal of Pharmacy and Biological Sciences (IOSR-JPBS) e-ISSN: 2278-3008, p-ISSN:2319-7676. Volume 7, Issue 2 (Jul. – Aug. 2013), PP 01-08 www.iosrjournals.org Polymerase Chain Reaction (PCR)-Based Sex Determination Using Unembalmed Human Cadaveric Skeletal Fragments From Sokoto, Northwestern Nigeria. A A B C *Zagga Ad, Tadros Aa, Ismail Sm, And Ahmed H, Oon. A Department of Anatomy, College of Health Sciences, Usmanu Danfodiyo University, Sokoto, Sokoto State, Nigeria. B Department of Medical Molecular Genetics, Division of Human Genetics and Genome Research, National Research Centre, Cairo, Egypt. CDepartment of Paediatrics, College of Health Sciences, Usmanu Danfodiyo University, Sokoto, Sokoto State, Nigeria. Abstract: The strategy developed for sex determination in skeletal remains is to amplify the highly degraded DNA, by use of primers that span short DNA fragments. To determine sex of unembalmed human cadaveric skeletal fragments from Sokoto, North-western Nigeria, using Polymerase Chain Reaction (PCR). A single blind study of Polymerase Chain Reaction (PCR)-based sex determination using amelogenin gene and alphoid repeats primers on unembalmed human cadaveric skeletal fragments from Sokoto, North-western Nigeria, was undertaken. With amelogenin gene, genetic sex identification was achieved in four samples only. PCR Sensitivity = 40%, Specificity = 100%, Predictive value of positive test = 100%, Predictive value of negative test = 25%, False positive rate = 0%, False negative rate = 150%, Efficiency of test = 50%. Fisher’s exact probability test P = 1. Z-test: z-value = -1.0955, p>0.05; not statistically significant. With alphoid repeats primers, correct genetic sex identification was achieved in all the samples. PCR Sensitivity = 100%, Specificity = 0%, Predictive value of positive test = 100%, Predictive value of negative test = 0%, False positive rate = 0%, False negative rate = 0%, Efficiency of test = 100%.