The Utilization of Non-Saccharomyces Yeast for Organoleptic Properties
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OSU Wine and Grape Research and Extension Newsletter February 2010
OSU Wine and Grape Research and Extension Newsletter February 2010 http://wine.oregonstate.edu In this issue: Welcome to the February 2010 Newsletter Welcome As the dormant season progresses towards the beginning of the 2010 vineyard season, we prepared this newsletter to focus on viticulture topics in disease management and cover Avoiding canker problems in cropping. the vineyard With pruning taking place across vineyards in Oregon, Dr. Jay Pscheidt reminds vineyard managers to be on alert for canker diseases. Also, as we prepare for this next season, OSU OSU Plant Clinic announces Plant Clinic is preparing for new diagnostic testing services for grape viruses. To round off the vineyard pest management sections of this newsletter, Dr. Amy Dreves provides an new grape virus testing updated report on the Spotted Wing Drosophila and the impacts in vineyards. Using cover crops as a tool in For those of you who participated in past OSU surveys, you can read a summary of a cover crop survey conducted in 2008-2009. Within that report, Dr. Patty Skinkis provides vineyard management an update on current cover crop research results. Finally, take a moment to check out upcoming events for winter 2010 and the newly What do we know about the released OSU Extension Viticulture publications on mealybug and leafroll monitoring. Spotted wing Drosophila in Cheers, The OSU Winegrape Team Oregon? Avoiding canker problems in the vineyard Oregon State University to Dr. Jay W. Pscheidt, OSU Extension Plant Pathology Specialist feature viticulture and enology A canker is a dead area of a vine generally found on a trunk or cordon. -
Discordant Evolution of Mitochondrial and Nuclear Yeast Genomes at Population Level
bioRxiv preprint doi: https://doi.org/10.1101/855858; this version posted November 27, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. ARTICLE Discordant evolution of mitochondrial and nuclear yeast genomes at population level Matteo De Chiara1, Anne Friedrich2, Benjamin Barré1, Michael Breitenbach3, Joseph Schacherer2,* and Gianni Liti1,* 1Université Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France 2Université de Strasbourg, CNRS, GMGM UMR 7156, F-67000 Strasbourg, France 3Universität Salzburg, Fachbereich Biowissenschaften, Salzburg, Austria *Correspondence should be addressed to GL ([email protected]) or JS ([email protected]) Abstract Mitochondria are essential organelles partially regulated by their own genomes. The mitochondrial genome maintenance and inheritance differ from nuclear genome, potentially uncoupling their evolutionary trajectories. Here, we analysed mitochondrial sequences obtained from the 1,011 Saccharomyces cerevisiae strain collection and identified pronounced differences with their nuclear genome counterparts. In contrast with most fungal species, S. cerevisiae mitochondrial genomes show higher genetic diversity compared to the nuclear genomes. Strikingly, mitochondrial genomes appear to be highly admixed, resulting in a complex interconnected phylogeny with weak grouping of isolates, whereas interspecies introgressions are very rare. Complete genome assemblies revealed that structural rearrangements are nearly absent with rare inversions detected. We tracked introns variation in COX1 and COB to infer gain and loss events throughout the species evolutionary history. Mitochondrial genome copy number is connected with the nuclear genome and linearly scale up with ploidy. We observed rare cases of naturally occurring mitochondrial DNA loss, petite, with a subset of them that do not suffer fitness growth defects. -
Does Wine Have a Place in Kant's Theory of Taste?1
Does Wine Have a Place in Kant’s Theory of Taste?1 Rachel Cristy, Princeton University Kant’s own answer to my title question is “no.” One can make of a wine the merely subjective judgment that it is agreeable, never the universally valid judgment that it is beautiful. Here is Kant’s only remark on wine in the Critique of the Power of Judgment: With regard to the agreeable, everyone is content that his judgment, which he grounds on a private feeling, and in which he says of an object that it pleases him, be restricted merely to his own person. Hence he is perfectly happy if, when he says that sparkling wine from the Canaries is agreeable, someone else should improve his expression and remind him that he should say “It is agreeable to me”; and this is so not only in the case of the taste of the tongue, palate, and throat, but also in the case of that which may be agreeable to someone’s eyes and ears. (KU §7, 5: 212) Here is Kant’s explanation for why wine can’t be judged beautiful: “Aesthetic judgments can be divided into empirical and pure. The first are those which assert agreeableness or disagreeableness, the second those which assert beauty of an object… the former are judgments of sense (material aesthetic judgments), the latter (as formal) are alone proper judgments of taste” (§14, 5: 223). Not only flavors and aromas, but also “mere color, e.g., the green of a lawn” and “mere tone…say that of a violin” are relegated to judgments of agreeableness, because they “have as their ground merely the matter of the representations, namely mere sensation” (§14, 5: 224). -
A Novel Bacteria-Free Method for Sour Beer Production 1 Kara Osburna
bioRxiv preprint doi: https://doi.org/10.1101/121103; this version posted March 27, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Primary souring: a novel bacteria-free method for sour beer production 2 Kara Osburna, Justin Amaralb, Sara R. Metcalfa, David M. Nickensa, Cody M. Rogersa, 3 Christopher Sausena, Robert Caputoc, Justin Millerc, Hongde Lid, Jason M. Tennessend, and 4 Matthew L. Bochmana,c* 5 aMolecular and Cellular Biochemistry Department, 212 South Hawthorne Drive, Simon Hall 6 MSB1, room 405B, Indiana University, Bloomington, IN 47405, USA. 7 [email protected] 8 [email protected] 9 [email protected] 10 [email protected] 11 [email protected] 12 [email protected] 13 14 bMainiacal Brewing Company, Bangor, ME 04401, USA. 15 [email protected] 16 17 cWild Pitch Yeast, Bloomington, IN 47405, USA. 18 [email protected] 19 [email protected] 20 21 dDepartment of Biology, Indiana University, 1001 East Third Street, Bloomington, IN 47405, 22 USA. 23 [email protected] 24 [email protected] 25 26 *Corresponding author: 27 Matthew L. Bochman, Ph.D. 28 Assistant Professor 29 Molecular and Cellular Biochemistry Department 30 212 South Hawthorne Drive 31 Simon Hall MSB1, room 405B 32 Indiana University 33 [email protected] 34 812-856-2095 1 bioRxiv preprint doi: https://doi.org/10.1101/121103; this version posted March 27, 2017. -
Matching Grape Varieties to Sites Are Hybrid Varieties Right for Oklahoma?
Matching Grape Varieties to Sites Are hybrid varieties right for Oklahoma? Bruce Bordelon Purdue University Wine Grape Team 2014 Oklahoma Grape Growers Workshop 2006 survey of grape varieties in Oklahoma: Vinifera 80%. Hybrids 15% American 7% Muscadines 1% Profiles and Challenges…continued… • V. vinifera cultivars are the most widely grown in Oklahoma…; however, observation and research has shown most European cultivars to be highly susceptible to cold damage. • More research needs to be conducted to elicit where European cultivars will do best in Oklahoma. • French-American hybrids are good alternatives due to their better cold tolerance, but have not been embraced by Oklahoma grape growers... Reasons for this bias likely include hybrid cultivars being perceived as lower quality than European cultivars, lack of knowledge of available hybrid cultivars, personal preference, and misinformation. Profiles and Challenges…continued… • The unpredictable continental climate of Oklahoma is one of the foremost obstacles for potential grape growers. • It is essential that appropriate site selection be done prior to planting. • Many locations in Oklahoma are unsuitable for most grapes, including hybrids and American grapes. • Growing grapes in Oklahoma is a risky endeavor and minimization of potential loss by consideration of cultivar and environmental interactions is paramount to ensure long-term success. • There are areas where some European cultivars may succeed. • Many hybrid and American grapes are better suited for most areas of Oklahoma than -
Grape Varieties for Indiana
Commercial • HO-221-W Grape Varieties for Indiana COMMERCIAL HORTICULTURE • DEPARTMENT OF HORTICULTURE PURDUE UNIVERSITY COOPERATIVE EXTENSION SERVICE • WEST LAFAYETTE, IN Bruce Bordelon Selection of the proper variety is a major factor for fungal diseases than that of Concord (Table 1). Catawba successful grape production in Indiana. Properly match- also experiences foliar injury where ozone pollution ing the variety to the climate of the vineyard site is occurs. This grape is used primarily in white or pink necessary for consistent production of high quality dessert wines, but it is also used for juice production and grapes. Grape varieties fall into one of three groups: fresh market sales. This grape was widely grown in the American, French-American hybrids, and European. Cincinnati area during the mid-1800’s. Within each group are types suited for juice and wine or for fresh consumption. American and French-American Niagara is a floral, strongly labrusca flavored white grape hybrid varieties are suitable for production in Indiana. used for juice, wine, and fresh consumption. It ranks The European, or vinifera varieties, generally lack the below Concord in cold hardiness and ripens somewhat necessary cold hardiness to be successfully grown in earlier. On favorable sites, yields can equal or surpass Indiana except on the very best sites. those of Concord. Acidity is lower than for most other American varieties. The first section of this publication discusses American, French-American hybrids, and European varieties of wine Other American Varieties grapes. The second section discusses seeded and seedless table grape varieties. Included are tables on the best adapted varieties for Indiana and their relative Delaware is an early-ripening red variety with small berries, small clusters, and a mild American flavor. -
Adaptive Evolution of Non-Saccharomyces Yeasts to Produce Wines with Low Ethanol Content Catarina Rocha
Adaptive Evolution of Non-Saccharomyces Yeasts to Produce Wines with Low Ethanol Content Catarina Rocha Abstract This work describes the implementation of adaptive evolution, a non-genetic engineering approach, applied to non- Saccharomyces yeasts to originate variants that produce reduced levels of ethanol, during alcoholic fermentation of grape must. Sub-lethal concentrations of potassium chloride and furfural were used as evolutive pressures. Both KCl and furfural impose stresses that affect the cell stability compromising the redox balance. The natural response of cell to regenerate NAD+ is increasing the production of glycerol. The original populations of two non-Saccharomyces strains, Metschnikowia pulcherrima 134|MET and Lachancea thermotolerans 483|LCH were subjected to adaptive evolution. In parallel, Saccharomyces cerevisiae 771|SAC strain was also put under adaptive evolution as a comparative evolutive line. At each 50 generations, the evolved populations were analyzed for ethanol and glycerol production and glucose and fructose consumption by enzymatic assays. The evolved populations under adaptive evolution did not show relevant differences regarding to the production of ethanol or glycerol, when compared with their originals. Additionally, ethyl methanesulfonate (EMS) was used as a mutagen to create a population of mutagenized cells. To assess the metabolome of yeasts, by identifying the metabolites present inside the cells and the ones exported to the environment, Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FTICR-MS) was applied along growth. In future, new adaptive evolution lines will be started with the EMS mutagenized cells and FTICR-MS Spectrometry will be used to compare the original yeast populations with the prospective evolved ones. Keywords: Non-Saccharomyces yeasts; Wine; Adaptive Evolution; Mutagenesis; Mass Spectrometry. -
Evaluation of the Chitin-Binding Dye Congo Red As a Selection Agent for the Isolation, Classification, and Enumeration of Ascomycete Yeasts
Archives of Microbiology (2018) 200:671–675 https://doi.org/10.1007/s00203-018-1498-y SHORT COMMUNICATION Evaluation of the chitin-binding dye Congo red as a selection agent for the isolation, classification, and enumeration of ascomycete yeasts Tomas Linder1 Received: 3 February 2018 / Revised: 19 February 2018 / Accepted: 21 February 2018 / Published online: 23 February 2018 © The Author(s) 2018. This article is an open access publication Abstract Thirty-nine strains of ascomycete yeasts representing 35 species and 33 genera were tested for their ability to grow on solid agar medium containing increasing concentrations of the chitin-binding dye Congo red. Six strains were classified as hyper- sensitive (weak or no growth at 10 mg/l Congo red), five were moderately sensitive (weak or no growth at 50 mg/l), three were moderately tolerant (weak or no growth at 100 mg/l), while the remaining 25 strains were classified as resistant (robust growth at ≥ 100 mg/l) with 20 of these strains classified as hyper-resistant (robust growth at 200 mg/l). Congo red growth phenotypes were consistent within some families but not others. The frequency of Congo red resistance among ascomycete yeasts was deemed too high for the practical use of Congo red as a selection agent for targeted isolation, but can be useful for identification and enumeration of yeasts. Keywords Antifungal · Cell wall · Phenotype · Yeast Introduction groups of yeasts. For example, chemically defined growth medium containing methanol as the sole carbon source is The development of genome sequencing over the past four commonly used to isolate species of methylotrophic yeasts decades has revolutionized yeast taxonomy and now enables (van Dijken and Harder 1974). -
Lachancea Thermotolerans Applications in Wine Technology
fermentation Review Lachancea thermotolerans Applications in Wine Technology Antonio Morata 1,* ID , Iris Loira 1 ID , Wendu Tesfaye 1, María Antonia Bañuelos 2, Carmen González 1 and José Antonio Suárez Lepe 1 1 Department of Chemistry and Food Technology, ETSIAAB, Technical University of Madrid, 28040 Madrid, Spain; [email protected] (I.L.); [email protected] (W.T.); [email protected] (C.G.); [email protected] (J.A.S.L.) 2 Department of Biotechnology-Plant Biology, ETSIAAB, Technical University of Madrid, 28040 Madrid, Spain; [email protected] * Correspondence: [email protected] Received: 20 June 2018; Accepted: 6 July 2018; Published: 11 July 2018 Abstract: Lachancea (kluyveromyces) thermotolerans is a ubiquitous yeast that can be naturally found in grapes but also in other habitats as soil, insects and plants, extensively distributed around the world. In a 3-day culture, it shows spherical to ellipsoidal morphology appearing in single, paired cells or short clusters. It is a teleomorph yeast with 1–4 spherical ascospores and it is characterized by a low production of volatile acidity that helps to control global acetic acid levels in mixed or sequential inoculations with either S. cerevisiae or other non-Saccharomyces species. It has a medium fermentative power, so it must be used in sequential or mixed inoculations with S. cerevisiae to get dry wines. It shows a high production of lactic acid able to affect strongly wine pH, sometimes decreasing wine pH by 0.5 units or more during fermentation. Most of the acidification is produced at the beginning of fermentation facilitating the effect in sequential fermentations because it is more competitive at low alcoholic degree. -
Grapes for Pennsylvania
United States Department of A Risk Management Agency Fact Sheet 2017 Crop Year Agriculture Raleigh Regional Office — Raleigh, NC Revised November 2016 Grapes Pennsylvania Crop Insured Important Dates Grape varieties grown for wine or juice are insurable Sales Closing Date ………...…. November 20, 2016 if the vines have: Acreage/Production Report Date ... January 15, 2017 Reached the fourth growing season after being set Premium Billing Date ……………. August 15, 2017 out for all native and hybrid varieties; and Produced an average of 2 tons per acre in at least Duties in the Event of Damage or Loss 1 of the 3 most recent crop years. Notice of Loss - If a loss occurs notify your crop insurance agent: Counties Available Within 72 hours of initial discovery of damage; Grapes are insurable in Erie and Lancaster counties. If you previously gave notice of crop damage, Grapes in other counties, including Vinifera grapes, you must also provide notice at least 15 days may be insurable by written agreement if specific before the beginning of harvest to claim an criteria are met. Contact a crop insurance agent for indemnity; or more details. At least 3 days before the date harvest should have started if the crop will not be harvested. Causes of Loss You are protected against the following: Coverage Levels and Premium Subsidies Adverse weather conditions, including hail, frost, Coverage levels range from 50 to 85 percent of your freeze, wind, drought, and excess precipitation; average yield (5-percent increments) and are subsidized as shown in the table below. Failure of irrigation water supply, if caused by an insured peril during the insurance period; Item Percent Fire caused by an insured peril during the Coverage Level 50 55 60 65 70 75 80 85 insurance period; Premium Insect damage and plant disease, except for Subsidy 67 64 64 59 59 55 48 38 insufficient or improper application of control Your measures; or Premium Share 33 36 36 41 41 45 52 62 Wildlife. -
Selected White Heirloom Grape Varieties for the Northeast
Selected White Heirloom Grape Varieties for the Northeast J. Stephen Casscles, J.D. Cedar Cliff Farm, Athens, NY This article outlines white heirloom grape varieties Moore of Brighton, NY (1835-1908) around 1870. It that I have grown on my farm and evaluated for the past is a Concord seed fertilized by Iona pollen that was fi fteen years. My farm, Cedar Cliff , is located in Athens, introduced as Moore’s Diamond around 1885. Its NY, which is on the west bank of the Mid-Hudson River progeny includes: Cayuga White, Horizon, and Melody. Valley. These quality heirloom varieties were bred in Diamond is an early mid-season ripening variety that New England and in the Hudson Valley between 1820 ripens about one week before Concord. It is very winter and 1890. Here we detail some of those varieties that hardy, productive, and a vigorous grower. The plant are suitable for cultivation in most of New England and resembles its seed parent Concord, but it is not as vig- the Middle Atlantic States except for its coldest regions. orous. However, it grows as well in the same soils as Many of these varieties are dual-purpose grapes that Concord, hence it has a wide range of habitat. It buds can be used to produce wine or sold as table grapes. out by mid-season, with disease resistance as good as The reader will fi nd that all of these varieties are Concord, but it is more susceptible to black rot. The productive, winter hardy, fungus disease, and drought pale green compact clusters can be somewhat variable resistant, and tolerate wide swings in temperature. -
Commercially Available Non-Saccharomyces Yeasts for Winemaking: Current Market, Advantages Over Saccharomyces, Biocompatibility, and Safety
fermentation Review Commercially Available Non-Saccharomyces Yeasts for Winemaking: Current Market, Advantages over Saccharomyces, Biocompatibility, and Safety Ricardo Vejarano 1,* and Angie Gil-Calderón 2 1 Dirección de Investigación y Desarrollo, Universidad Privada del Norte (UPN), Trujillo 13001, Peru 2 Ingeniería Agroindustrial, Universidad Privada del Norte (UPN), Trujillo 13001, Peru; [email protected] * Correspondence: [email protected] Abstract: About 42 commercial products based on non-Saccharomyces yeasts are estimated as avail- able on the market, being mostly pure cultures (79%), with a predominance of Torulaspora delbrueckii, Lachancea thermotolerans, and Metschnikowia pulcherrima. The others are multi-starter consortia that include non-Saccharomyces/Saccharomyces mixtures or only non-Saccharomyces species. Several com- mercial yeasts have shown adequate biocompatibility with S. cerevisiae in mixed fermentations, allowing an increased contribution of metabolites of oenological interest, such as glycerol, esters, higher alcohols, acids, thiols, and terpenes, among others, in addition to a lower production of acetic acid, volatile phenols, biogenic amines, or urea. Multi-starter inoculations are also reviewed here, which show adequate biocompatibility and synergy between species. In certain cases, the aromatic profile of wines based on grape varieties considered neutral is improved. In addition, several yeasts show the capacity as biocontrollers against contaminating microorganisms. The studies conducted to Citation: Vejarano, R.; Gil-Calderón, A. Commercially date demonstrate the potential of these yeasts to improve the properties of wine as an alternative and Available Non-Saccharomyces Yeasts complement to the traditional S. cerevisiae. for Winemaking: Current Market, Advantages over Saccharomyces, Keywords: commercial non-Saccharomyces yeasts; winemaking; biocompatibility; wine quality Biocompatibility, and Safety.