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Cattle Genetic Resources in Japan: One Successful Crossbreeding Story and Genetic Diversity Erosion
ᙾ㉏ᵩả 2003/8/15 ֏ૌ 01:38 C:\Documents Cattleand Settings\Administrator\ Genetic Resources ோ૿ in Japan\ᄅངᏺᅃ \05_Japan_cattle_edited(4).doc Cattle Genetic Resources in Japan: One Successful Crossbreeding Story and Genetic Diversity Erosion Mitsuru MINEZAWA Animal Genetic Resources Laboratory, Genebank, National Institute of Agrobiological Sciences, Japan Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan I. Beef cattle production background I-1. Historical features influencing cattle production Besides pigs and ducks, Sus scrofa and Anas sp., no ancestral domesticated animals naturally inhabited Japan. Domestic animals, such as pigs, cattle and chickens were introduced in the late Jomon (~ B.C. 500) to Yayoi Eras (B.C. 500 – A.D. 300). A Chinese historical book (~ A.D. 250) described that there were no cattle, horses or sheep in Japan. Because no descriptions of pigs and chickens were found in the book, the possibility of their existence could not be denied. Several books written in the mid 7th century referred to cow’s milk. Engishiki (A.D. 927), written in the Heian Era, is a description of the milk product, “So”, surmised as condensed milk for medical purposes. A reference to a presentation of “So” to the government is made in this book. However, this habit was abolished at the beginning of the 12th century. The government banned the slaughtering of animals, cattle, horses, dogs, monkeys and chickens in A.D. 675. Cattle and horse slaughtering were abolished again in A.D. 742. This suggested that the people of this period ate meat. After the prohibitory edict, meat and milk became less common. -
Animal Genetic Resources Information Bulletin
The designations employed and the presentation of material in this publication do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. Les appellations employées dans cette publication et la présentation des données qui y figurent n’impliquent de la part de l’Organisation des Nations Unies pour l’alimentation et l’agriculture aucune prise de position quant au statut juridique des pays, territoires, villes ou zones, ou de leurs autorités, ni quant au tracé de leurs frontières ou limites. Las denominaciones empleadas en esta publicación y la forma en que aparecen presentados los datos que contiene no implican de parte de la Organización de las Naciones Unidas para la Agricultura y la Alimentación juicio alguno sobre la condición jurídica de países, territorios, ciudades o zonas, o de sus autoridades, ni respecto de la delimitación de sus fronteras o límites. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying or otherwise, without the prior permission of the copyright owner. Applications for such permission, with a statement of the purpose and the extent of the reproduction, should be addressed to the Director, Information Division, Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, 00100 Rome, Italy. Tous droits réservés. Aucune partie de cette publication ne peut être reproduite, mise en mémoire dans un système de recherche documentaire ni transmise sous quelque forme ou par quelque procédé que ce soit: électronique, mécanique, par photocopie ou autre, sans autorisation préalable du détenteur des droits d’auteur. -
The Genetic Diversity of Japanese Wagyu Using Molecular Markers
Journal of Animal Breeding and Genomics JABG. 2017 Sep, 1(1): 17-22 https://doi.org/10.12972/jabng.20170002 Review OPEN ACCESS The genetic diversity of Japanese Wagyu using molecular markers Hideyuki MANNEN1* 1Laboratory of Animal Breeding and Genetics, Graduate School of Agricultural Science, Kobe University, Nada, Kobe 657-8501, Japan ABSTRACT We have investigated the genetic diversity and structure using several DNA markers, such as mtDNA, Sry gene in Y chromosome and autosomal SNPs for Japanese Wagyu and native cattle in the North Eastern Asia. Most of Japanese cattle mtDNA belonged to Bos taurus mtDNA haplogroups T1, T2, T3 and T4. All Japanese populations included Asian unique mtDNA haplogroup T4 with high frequencies (0.43 – 0.81). The predominant T4 haplogroup may be a result of founder effect when ancestral cattle were introduced to Japan Islands at the immigration. We found that Mongolian cattle have Bos indicus mtDNA with the genetic frequency of 0.20, but no Bos indicus Y chromosome. No Bos indicus mtDNA in both Japanese and Korean samples suggested that the introgression may be a secondary phenomenon, with the earlier cattle in the region being purely Bos taurus. We analyzed 117 SNPs to assess the genetic diversity, structure and relationships of 16 Eurasian cattle populations. The results could suffi ciently explain the genetic construction of Asian cattle populations. These results reflected to the geographical and historical background in each population. The genetic information would contribute to understanding origin of North Asian native cattle, in addition to the origin of Japanese Wagyu cattle. Keywords: Genetic diversity, mtDNA, molecular markers, origin, Wagyu Introduction The Wagyu generally refers to four Japanese native breeds bred in Japan, but nowadays the famous brand name Wagyu includes not only Japanese native cattle produced in Japan, but also animals or even crossbred Japanese native cattle produced in foreign countries such as Australia or the United States. -
Japanese Beef Cattle - Wa Means Japan[Ese] and Gyu Means Cow
Definition and breed makeup Origins Meat Quality Breed Register and its Structure Wagyu is the name of Japanese beef cattle - wa means Japan[ese] and gyu means cow. There are four(4) types of Wagyu Cattle in Japan; Japanese Black Japanese Brown or Red (also known as Akaushi) Japanese Shorthorn Japanese Poll Japanese Beef cattle Japanese Black Japanese Brown (Wagyu) (Red Wagyu) Native Cattle Japanese Shorthorn Japanese Poll These breed have been established by cross between Japanese native cattle and western breeds. The Japanese Black, called “Wagyu”, is the most popular beef cattle in Japan, and this breed was established by cross between Japanese native cattle and several European breeds, including Brown Swiss, Devon, and Ayrshire Japanese Brown, known as “Red Wagyu”, was established by cross with Korean originated cattle and Simmental breed. We have also Japanese shorthorn and Japanese polled, but the population of these two breeds has recently significantly reduced in recent times • For centuries Buddhism was predominant in Japan and meat consumption was prohibited. The utilization of animal products did not become popular until the Meiji restoration in 1868 In the Meiji era many foreign breeds were introduced to Japan and initially crossbred with the native cattle under the direction of the government. Through this, the gene pool for Japanese breed had diluted but the population had expanded. After the initial frenzy of crossbreeding was over, cattle breeders began to improve and promote their own breeds without further crossbreeding within the prefectures. Meat has been consumed in Japan for only about 140 years. Meat eating has only reached widespread popularity in the last 40 years after the “Law for Improvement and Increased Livestock Production” was enacted in 1950s. -
Genetic Animal Genetic Resources
The Third Ministry of Agriculture, Forestry and Fisheries, Japan (MAFF) International Workshop on Genetic Resources Animal Genetic Resources: Efficient Conservation and Effective Use Tsukuba Office Agriculture, Forestry and Fisheries Research Council Secretariat December 5 - 7, 1995 Sponsored by Research Council Secretariat of MAFF and National Institute of Agrobiological Resources in cooperation with National Institute of Animal Industry, National Institute of Sericultural & Entomological Sciences, National Institute of Animal Health, and Japanese International Research Center for Agricultural Sciences Contents Page Introduc i on Welcome address T. Hosoda 3 Opening address M.Nakagahra 5 Keynote addresses Why and Howto Conserve Domesticated Animal Genetic Resources I. Bodo 7 History and Phytogeny of Japanese Native Animals and Strategies for Their Effective Use Y.Tanabe 17 Discussion 3 5 Session 1 : Economic evaluation Economic Evaluation of Mongolian Sheep Genetic Resources Ts.Zhanchiv 39 Economic Evaluation of Pig Genetic Resources in China A.Wang 45 Characterization and Conservation of Silkworm Genetic Resources in India RK.Datta 55 Chicken Genetic Resources in Japan and NewEvaluation Research K.Nirasawa, H.Takahashi, T. Furukawa, K. Kikuchi, J. Noguchi, Y. Izaike and T. Oishi 73 Discussion 8 3 Session2: Genetic classification Genetic Classification of Asian Buffaloes Based on Biochemical and Molecular Polymorphisms S.G.Tan 87 Phylogenetic Relationships and Conservation of Bovine and Bubaline Species in Asia T. Namikawa, K. Tanaka and C. D. Solis 99 The Phylogenetic Relationship and Differentiation of Wild and Domesticated Pigs (Sus scrofa L.) in Asia Y.Kurosawa 111 Discussion 12 1 Session 3: Conservation systems Animal Genetic Resources and Conservation System in Vietnam L.V.Ly 125 Conservation Systems of Animal Genetic Resources in The Philippines J.M.Matias 131 Collection and Preservation of Animal Genetic Resources in the MAFF Gene Bank Y. -
English (Table 14)
Country Report (For FAO State of the World’s Animal Genetic Resources Process) Contact address Editorial Committee Office of the Japanese Country Report Animal Genetic Resources Laboratory, Genebank National Institute of Agrobiological Sciences 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan TEL/FAX +81-29-838-7041 [email protected] Contents Part 1 1.1 Japan’s geographical conditions and the current status of animal production 1 • Fauna of Japan (the National Strategy of Japan on Biological Diversity 2002) 1 • Relationship between production systems, agricultural ecosystems, socio-economic conditions and livestock diversity 2 • Importance of animal production in the Japanese economy 3 1.2 Conservation status of the farm animal diversity 4 • Diversity among domestic livestock species and breeds 4 • Systems for conservation of genetic resources 9 MAFF gene bank project 9 Projects for conserving native horses in Japan 10 Natural treasures 11 Conservation of livestock and poultry as animals for study 11 • Breeding technologies utilized for animal production in Japan 12 • Technology applicable to rare livestock and poultry 13 Pig’s unfertilized egg and sperm microinjection 13 Formation of chicken PGC (primordial germ cell) and chimera germline 13 • State of trait characterization and evaluation (fundamental, production-related, quantitative, molecular genetic assessment) 13 ii • Information systems in Japan 15 1.3 Livestock utilization status 17 • The utilization of breeds by animal species (data related to livestock improvement 2000) -
International Collaboration for Conservation and Utilization of Porcine Genetic Resources
Session 4: Perspective, Usage, and International Cooperation INTERNATIONAL COLLABORATION FOR CONSERVATION AND UTILIZATION OF PORCINE GENETIC RESOURCES Kazuhiro Kikuchi1,2*, Takeshige Otoi2, and Nguyen Manh Dzung3 1 National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, Japan 2 Yamaguchi University, Yamaguchi, Japan 3 National Institute of Animal Sciences, Hanoi, Vietnam *e-mail: [email protected] ABSTRACT Porcine genetic resources in local regions have been in dangerous situation for quite sometime because their numbers of breeds and individuals are reducing dramatically after the introduction of commercial breeds for expecting high productivity. For overcoming these situations, intense activities such as cryobanking of gametes, gonadal tissues and early-stage embryos of rare (endangered) breeds are necessary. For example in Japan, the National Institute of Agrobiological Sciences or NIAS has established a Genebank Project with the financial support from the Ministry of Agriculture, Forestry and Fisheries, Japan. In the project, 1908 items have been conserved (from NIAS database, FY2013); those resources are now used for creating new products such as brand chicken or pork, of which values are highly-evaluated by consumers. Furthermore, pigs especially mini- pigs are expected as experimental animals for biomedical use (e.g. xenografting of organs) in developed counties. Sustainable utilization of porcine genetic resources will help the advanced conservation of porcine genetic resources at low cost. However, in some cases in developing countries having rare porcine breeds, conservation and utilization of genetic resources have remained at the primitive stage; in other words, international collaboration between these types of countries is now necessary. In the present symposium, we introduce one possible project plan about “Establishments of cryobank system for native porcine resources and of sustainable production system” between Japan and Vietnam. -
Animal Genetic Resources Information Bulletin
59 THE VECHUR CATTLE OF KERALA Sosamma Type Centre for Advanced Studies in Animal Breeding and Genetics. Kerala Agricultural University, Mannuthy, Trichur, Kerala - 680651 lNDIA SUMMARY Vechur cattle, once popular in southern Kerala (India) is on the verge of extinction. By extensive search the few remaining animals could be traced. They are being conserved by Kerala Agricultural University. Cows are extremely sma.ll in size, i.e. weighing around 125 kg with a height of not more than 90 cm They are capable of producing 2-3 kg fat milk per day. Heat tolerance, disease resistance and general adaptability are added qualities. Age at first calving is three years and the intercalving period 14 months. As a part of characterization of these animals, cytogenetic, biochemical, immunogenetic studies as well as blood typing, milk composition and fat globule studies have been taken up. RESUME La race bovine Vechur, très dffuse dans le passé dans la région méridionale de Kerala (Inde), se trouve en danger d’extinction. A travers une recherche extensive il serait possible de décrire l’effectif réduit d’animaux existants encore. Ceux-ci sont conservés à 1‘Université Agricole de Kerala. Les femelles présentent une taille très réduite, avec un poids aux alentours de 125 kg, et une hauteur qui ne dépasse pas les 9U cm I.e niveau de productionjournalier peut atteindre les 2 ou 3 kg de lait, avec une haute teneur en graisse. Parmi les autres atouts on peut noter la tolérance à la chaleur, la résistance aux maladies, et une bonne adaptabilité générale. L’âge à la première mise-bas est de trois ans, avec un intervalle entre mise-bas de 14 mois. -
The Best Suited Cattle Breed for Sustainable Small Farms in Indonesia
Bail Cattle ཚ 2003/10/13 Հ֑ 03:39 C:\Documents and Settings\Administrator\ோ૿\1001 ᒮ\1013 ଥֲم৬ ޏ\14-35.doc Indigenous Bali Cattle: The Best Suited Cattle Breed for Sustainable Small Farms in Indonesia Harimurti MARTOJO Laboratory of Animal Breeding and Genetics, Faculty of Animal Science, Bogor Agricultural University, Indonesia Introduction Indonesia has a total population of around 206 million with 4.5 million households keeping livestock. About half of the cattle farmers are small farmers. The Indonesian archipelago is a land area of 1.8 million km2 consisting of over 13,000 islands stretching from the Western tip of Sumatra to the Eastern border of Papua. The largest island, Kalimantan (Borneo), covers 28% of the total land area. Java, with only 6 – 7% of the total land area, is inhabited by around 60% of the total population and is the most densely populated island. The agro-ecological zones vary from the humid coastal wetland swamps in Sumatra, Java, South Sulawesi and Bali, to the sub-humid and semiarid dry land in the eastern part of Java, Sulawesi and most of the Nusa Tenggara islands. There is a wetter to a drier climate from the west to the east. Approximately 60% of the archipelago has about 7 – 9 consecutive months of rain in the wet season and less than two months with no rain in the dry season. The eastern islands have the lowest rainfall with the dry season varying from 3 to 8 months. The average temperature stays within a constant range differing in only a few degrees centigrade between the hot and cool months. -
Kobe University Repository : Kernel
Kobe University Repository : Kernel タイトル The Japanese Wagyu beef industry: current situation and future Title prospects - A review 著者 Gotoh, Takafumi / Nishimura, Takanori / Kuchida, Keigo / Mannen, Author(s) Hideyuki 掲載誌・巻号・ページ Asian-Australasian Journal of Animal Sciences,31(7):933-950 Citation 刊行日 2018-07 Issue date 資源タイプ Journal Article / 学術雑誌論文 Resource Type 版区分 publisher Resource Version © 2018 by Asian-Australasian Journal of Animal Sciences. This is an open-access article distributed under the terms of the Creative 権利 Commons Attribution Non-Commercial License Rights (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. DOI 10.5713/ajas.18.0333 JaLCDOI URL http://www.lib.kobe-u.ac.jp/handle_kernel/90005024 PDF issue: 2021-10-05 Open Access Asian-Australas J Anim Sci Vol. 31, No. 7:933-950 July 2018 https://doi.org/10.5713/ajas.18.0333 pISSN 1011-2367 eISSN 1976-5517 The Japanese Wagyu beef industry: current situation and future prospects — A review Takafumi Gotoh1,2,*, Takanori Nishimura3, Keigo Kuchida4, and Hideyuki Mannen5 * Corresponding Author: Takafumi Gotoh Abstract: In Japan, Wagyu cattle include four Japanese breeds; Black, Brown, Shorthorn, and Tel: +81-99-285-8699, Fax: +81-99-285-8699, E-mail: [email protected] Polled. Today, the renowned brand name Wagyu includes not only cattle produced in Japan, but also cattle produced in countries such as Australia and the United States. In recent years, 1 Department of Agricultural Sciences and Natural the intramuscular fat percentage in beef (longissimus muscle) from Japanese Black cattle has Resources, Faculty of Agriculture, Kagoshima University, Kagoshima, 890-0065, Japan increased to be greater than 30%. -
Low Mitochondrial DNA Diversity of Japanese Polled And
Kobe University Repository : Kernel タイトル Low mitochondrial DNA diversity of Japanese Polled and Kuchinoshima Title feral cattle Mannen, Hideyuki / Yonesaka, Riku / Noda, Aoi / Shimogiri, Takeshi / 著者 Oshima, Ichiro / Katahira, Kiyomi / Kanemaki, Misao / Kunieda, Tetsuo / Author(s) Inayoshi, Yousuke / Mukai, Fumio / Sasazaki, Shinji 掲載誌・巻号・ページ Animal Science Journal,88(5):739-744 Citation 刊行日 2017-05 Issue date 資源タイプ Journal Article / 学術雑誌論文 Resource Type 版区分 author Resource Version © 2016 Japanese Society of Animal Science. This is the peer reviewed version of the following article: [Animal Science Journal, 88(5):739-744, 権利 2017], which has been published in final form at Rights https://doi.org/10.1111/asj.12716. This article may be used for non- commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions. DOI 10.1111/asj.12716 JaLCDOI URL http://www.lib.kobe-u.ac.jp/handle_kernel/90005793 PDF issue: 2021-01-26 1 1 Low mitochondrial DNA diversity of Japanese Polled and Kuchinoshima 2 feral cattle 3 4 Hideyuki MANNEN,1,* Riku YONESAKA,1 Aoi NODA,1 Takeshi SHIMOGIRI,2 5 Ichiro OSHIMA,2 Kiyomi KATAHIRA,2 Misao KANEMAKI,3 Tetsuo KUNIEDA,4 6 Yousuke INAYOSHI,5 Fumio MUKAI6 and Shinji SASAZAKI1 7 8 1 Laboratory of Animal Breeding and Genetics, Graduate School of Agricultural 9 Science, Kobe University, Nada, Kobe 657-8501, Japan, 2Faculty of Agriculture, 10 Kagoshima University, Korimoto, Kagoshima 890-8580, Japan, 3Institute for 11 Animal Science, Shitara, Aichi 441-2423, Japan, 4Graduate School of 12 Environmental and Life Science, Okayama University, Tsushima–naka, Kita-ku, 13 Okayama 700-8530, Japan, 5Yamaguchi Prefectural Agriculture & Forestry 14 General Technology Center, Yamaguchi 753-0214, Japan, 6Wagyu Registry 15 Association, Kyoto 604-0845, Japan 16 17 *Correspondence: Hideyuki Mannen, Graduate School of Agricultural Science, 18 Kobe University, Nada, Kobe 657-8501, Japan. -
Abundant Sequence Divergence in the Native Japanese Cattle Mishima-Ushi (Bos Taurus) Detected Using Whole-Genome Sequencing☆
Genomics 102 (2013) 372–378 Contents lists available at ScienceDirect Genomics journal homepage: www.elsevier.com/locate/ygeno Abundant sequence divergence in the native Japanese cattle Mishima-Ushi (Bos taurus) detected using whole-genome sequencing☆ Kaoru Tsuda a,1,2, Ryouka Kawahara-Miki a,2, Satoshi Sano b,MisakiImaia,TatsuoNoguchic, Yousuke Inayoshi d,TomohiroKonoa,e,⁎ a Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan b Ulvaniac Inc., 1-10-7 Higashi-gotanda, Shinagawa-ku, Tokyo 141-0022, Japan c Fuji Experimental Farm, Tokyo University of Agriculture, 422 Fumoto, Fujinomiya-shi, Shizuoka 418-0109, Japan d Livestock Improvement Research Laboratory, Livestock Technology Research Department, Yamaguchi Prefectural Agriculture and Forestry General Technology Center, 1200 Ichoukawara, Mine-shi, Yamaguchi 759-2221, Japan e Department of Bioscience, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan article info abstract Article history: The native Japanese cattle Mishima-Ushi, a designated national natural treasure, are bred on a remote island, which Received 23 April 2013 has resulted in the conservation of their genealogy. We examined the genetic characteristics of 8 Mishima-Ushi in- Accepted 2 August 2013 dividuals by using single nucleotide polymorphisms (SNPs), insertions, and deletions obtained by whole-genome Available online 9 August 2013 sequencing. Mapping analysis with various criteria showed that predicted heterozygous SNPs were more preva- lent than predicted homozygous SNPs in the exonic region, especially non-synonymous SNPs. From the identified Keywords: 6.54 million polymorphisms, we found 400 non-synonymous SNPs in 313 genes specifictoeachofthe8Mishima- Bos taurus Mishima-Ushi Ushi individuals.