SARS-Cov-2 Variants of Concern and Variants Under Investigation in England
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Molecular Analysis of SARS-Cov-2 Genetic Lineages in Jordan: Tracking the Introduction and Spread of COVID-19 UK Variant of Concern at a Country Level
pathogens Article Molecular Analysis of SARS-CoV-2 Genetic Lineages in Jordan: Tracking the Introduction and Spread of COVID-19 UK Variant of Concern at a Country Level Malik Sallam 1,2,* and Azmi Mahafzah 1,2 1 Department of Pathology, Microbiology and Forensic Medicine, School of Medicine, The University of Jordan, Amman 11942, Jordan; [email protected] 2 Department of Clinical Laboratories and Forensic Medicine, Jordan University Hospital, Amman 11942, Jordan * Correspondence: [email protected]; Tel.: +962-79-184-5186 Abstract: The rapid evolution of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is manifested by the emergence of an ever-growing pool of genetic lineages. The aim of this study was to analyze the genetic variability of SARS-CoV-2 in Jordan, with a special focus on the UK variant of concern. A total of 579 SARS-CoV-2 sequences collected in Jordan were subjected to maximum likelihood and Bayesian phylogenetic analysis. Genetic lineage assignment was undertaken using the Pango system. Amino acid substitutions were investigated using the Protein Variation Effect Analyzer (PROVEAN) tool. A total of 19 different SARS-CoV-2 genetic lineages were detected, with the most frequent being the first Jordan lineage (B.1.1.312), first detected in August 2020 (n = 424, 73.2%). This was followed by the second Jordan lineage (B.1.36.10), first detected in September 2020 (n = 62, 10.7%), and the UK variant of concern (B.1.1.7; n = 36, 6.2%). In the spike gene region, Citation: Sallam, M.; Mahafzah, A. the molecular signature for B.1.1.312 was the non-synonymous mutation A24432T resulting in a Molecular Analysis of SARS-CoV-2 deleterious amino acid substitution (Q957L), while the molecular signature for B.1.36.10 was the Genetic Lineages in Jordan: Tracking synonymous mutation C22444T. -
REALM Research Briefing: Vaccines, Variants, and Venitlation
Briefing: Vaccines, Variants, and Ventilation A Briefing on Recent Scientific Literature Focused on SARS-CoV-2 Vaccines and Variants, Plus the Effects of Ventilation on Virus Spread Dates of Search: 01 January 2021 through 05 July 2021 Published: 22 July 2021 This document synthesizes various studies and data; however, the scientific understanding regarding COVID-19 is continuously evolving. This material is being provided for informational purposes only, and readers are encouraged to review federal, state, tribal, territorial, and local guidance. The authors, sponsors, and researchers are not liable for any damages resulting from use, misuse, or reliance upon this information, or any errors or omissions herein. INTRODUCTION Purpose of This Briefing • Access to the latest scientific research is critical as libraries, archives, and museums (LAMs) work to sustain modified operations during the continuing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic. • As an emerging event, the SARS-CoV-2 pandemic continually presents new challenges and scientific questions. At present, SARS-CoV-2 vaccines and variants in the US are two critical areas of focus. The effects of ventilation-based interventions on the spread of SARS-CoV-2 are also an interest area for LAMs. This briefing provides key information and results from the latest scientific literature to help inform LAMs making decisions related to these topics. How to Use This Briefing: This briefing is intended to provide timely information about SARS-CoV-2 vaccines, variants, and ventilation to LAMs and their stakeholders. Due to the evolving nature of scientific research on these topics, the information provided here is not intended to be comprehensive or final. -
Randomised Trial to Compare the Immunogenicity and Safety of a CRM Or TT Conjugated Quadrivalent Meningococcal Vaccine in Teenag
Title Page Randomised trial to compare the immunogenicity and safety of a CRM or TT 1 2 conjugated quadrivalent meningococcal vaccine in teenagers who received a 3 4 5 CRM or TT conjugated serogroup C vaccine at preschool age 6 7 8 9 1,2 1,3 1 10 David A. Ishola , FFPH; Nick Andrews , PhD; Pauline Waight , BSc; Chee-Fu 11 12 Yung1,6, FFPH; Jo Southern1, PhD; Xilian Bai4, PhD; Helen Findlow4, PhD; Mary 13 14 5 5 5 4 15 Matheson , PhD; Anna England , MSc; Bassam Hallis , PhD; Jamie Findlow , PhD; 16 4 1 17 Ray Borrow , PhD; Elizabeth Miller , FRCPath. 18 19 1. Immunisation Department, Public Health England (PHE), London, UK 20 21 22 2. Department of Infection and Population Health, University College London, 23 24 London, UK 25 26 27 3. Statistics, Modelling, and Economics Department, PHE London, UK 28 29 4. Vaccine Evaluation Unit, PHE, Manchester Medical Microbiology Partnership, 30 31 32 Manchester Royal Infirmary, Manchester, UK 33 34 5. Microbiology Services, PHE, Porton Down, Salisbury, UK 35 36 6. Department of Clinical Epidemiology, Communicable Disease Centre, Tan Tock 37 38 39 Seng Hospital, Singapore. 40 41 Correspondence: David Ishola, University College London, Department of Infection 42 43 44 and Population Health, 222 Euston Road, London NW1 2DA, UK. Tel: +44 45 46 (0)7946412701. Fax: +44 (0)20 83277404. E-mail: [email protected] 47 48 49 Address for reprints: Not applicable (reprints not available). 50 51 Key words: Meningococcal, vaccine, teenagers, antibody, randomised trial 52 53 54 Abbreviated title: Teenage MenACWY booster vaccination: Randomised trial 55 56 Running head title: Teenage MenACWY booster vaccination 57 58 59 60 61 62 1 63 64 65 CONFLICTS OF INTEREST AND SOURCE OF FUNDING: 1 2 Funding and support: This report is independent research commissioned and 3 4 5 funded by the UK Department of Health Policy Research Programme (National 6 7 Vaccine Evaluation Consortium, 039/0031). -
The NHS's Role in the Public's Health
The NHS’s role in the public’s health A report from the NHS Future Forum Workstream members Vicky Bailey ‐ Chair, NHS’s role in the public’s health group Chief Operating Officer, Principia Rushcliffe Clinical Commissioning Group Ash Soni ‐ Chair, NHS’s role in the public’s health group Community Pharmacist; Clinical Network Lead, NHS Lambeth Dr Charles Alessi Senior GP Partner, The Churchill Practice Dr Frank Atherton President, Association of Directors of Public Health; Director of Public Health, North Lancashire Cluster Ratna Dutt Chief Executive, Race Equality Foundation Paul Farmer Chief Executive, Mind Moira Gibb Chief Executive, London Borough of Camden; Chair, Social Work Task Force Chris Long Chief Executive, Humber Cluster Claire Marshall Head of Professions, Heatherwood and Wexham Park Hospitals NHS Foundation Trust Dr Tim Riley Chief Executive, Wellstate Group Ltd Tom Riordan Chief Executive, Leeds City Council Dr Robina Shah Chair, Stockport NHS Foundation Trust Professor Jimmy Steele Head of School and Professor of Oral Health Services Research, School of Dental Sciences, Newcastle University Gill Walton Director of Midwifery, Portsmouth Hospitals NHS Trust Contents Contents.........................................................................................................................2 Foreword........................................................................................................................3 Terms used in this report...............................................................................5 -
COVID-19 Vaccination Programme: Information for Healthcare Practitioners
COVID-19 vaccination programme Information for healthcare practitioners Republished 6 August 2021 Version 3.10 1 COVID-19 vaccination programme: Information for healthcare practitioners Document information This document was originally published provisionally, ahead of authorisation of any COVID-19 vaccine in the UK, to provide information to those involved in the COVID-19 national vaccination programme before it began in December 2020. Following authorisation for temporary supply by the UK Department of Health and Social Care and the Medicines and Healthcare products Regulatory Agency being given to the COVID-19 Vaccine Pfizer BioNTech on 2 December 2020, the COVID-19 Vaccine AstraZeneca on 30 December 2020 and the COVID-19 Vaccine Moderna on 8 January 2021, this document has been updated to provide specific information about the storage and preparation of these vaccines. Information about any other COVID-19 vaccines which are given regulatory approval will be added when this occurs. The information in this document was correct at time of publication. As COVID-19 is an evolving disease, much is still being learned about both the disease and the vaccines which have been developed to prevent it. For this reason, some information may change. Updates will be made to this document as new information becomes available. Please use the online version to ensure you are accessing the latest version. 2 COVID-19 vaccination programme: Information for healthcare practitioners Document revision information Version Details Date number 1.0 Document created 27 November 2020 2.0 Vaccine specific information about the COVID-19 mRNA 4 Vaccine BNT162b2 (Pfizer BioNTech) added December 2020 2.1 1. -
H 955 Great Britain
Great Britain H 955 BACKGROUND: The heading Great Britain is used in both descriptive and subject cataloging as the conventional form for the United Kingdom, which comprises England, Northern Ireland, Scotland, and Wales. This instruction sheet describes the usage of Great Britain, in contrast to England, as a subject heading. It also describes the usage of Great Britain, England, Northern Ireland, Scotland, and Wales as geographic subdivisions. 1. Great Britain vs. England as a subject heading. In general assign the subject heading Great Britain, with topical and/or form subdivisions, as appropriate, to works about the United Kingdom as a whole. Assign England, with appropriate subdivision(s), to works limited to that country. Exception: Do not use the subdivisions BHistory or BPolitics and government under England. For a work on the history, politics, or government of England, assign the heading Great Britain, subdivided as required for the work. References in the subject authority file reflect this practice. Use the subdivision BForeign relations under England only in the restricted sense described in the scope note under EnglandBForeign relations in the subject authority file. 2. Geographic subdivision. a. Great Britain. Assign Great Britain directly after topics for works that discuss the topic in relation to Great Britain as a whole. Example: Title: History of the British theatre. 650 #0 $a Theater $z Great Britain $x History. b. England, Scotland, Northern Ireland, and Wales. Assign England, Scotland, Northern Ireland, or Wales directly after topics for works that limit their discussion to the topic in relation to one of the four constituent countries of Great Britain. -
COVID-19 Weekly Epidemiological Update
COVID-19 Weekly Epidemiological Update Edition 45, published 22 June 2021 In this edition: • Global overview • Special focus: Update on SARS-CoV-2 Variants of Interest and Variants of Concern • Special focus: Global Consultation on SARS-CoV-2 Variants of Concern and their Impact on Public Health Interventions • WHO regional overviews • Key weekly updates Global overview Data as of 20 June 2021 Global numbers of cases and deaths continued to decrease over the past week (14-20 June 2021) with over 2.5 million new weekly cases and over 64 000 deaths, a 6% and a 12% decrease respectively, compared to the previous week (Figure 1). While the number of cases reported globally now exceeds 177 million, last week saw the lowest weekly case incidence since February 2021. This week, the Americas and Western Pacific Regions reported numbers of new weekly cases similar to the previous week, while the South-East Asia and the European Regions reported a decline in the number of new cases. The African Region recorded a marked increase in the number of weekly cases as compared to the previous week (Table 1). Globally, mortality remains high with more than 9000 deaths reported each day over the past week, however, the number of new deaths reported in the past week decreased across all Regions except for the Eastern Mediterranean and the African Regions. Figure 1. COVID-19 cases reported weekly by WHO Region, and global deaths, as of 20 June 2021** 6 000 000 120 000 Americas South-East Asia 5 000 000 100 000 Europe Eastern Mediterranean 4 000 000 Africa -
Effectiveness of COVID-19 Vaccines Against Variants of Concern, Canada
medRxiv preprint doi: https://doi.org/10.1101/2021.06.28.21259420; this version posted July 3, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license . Effectiveness of COVID-19 vaccines against variants of concern, Canada Authors: Sharifa Nasreen PhD1, Siyi He MSc1, Hannah Chung MPH1, Kevin A. Brown PhD1,2,3, Jonathan B. Gubbay MD MSc3, Sarah A. Buchan PhD1,2,3,4, Sarah E. Wilson MD MSc1,2,3,4, Maria E. Sundaram PhD1,2, Deshayne B. Fell PhD1,5,6, Branson Chen MSc1, Andrew Calzavara MSc1, Peter C. Austin PhD1,7, Kevin L. Schwartz MD MSc1,2,3, Mina Tadrous PharmD PhD1,8, Kumanan Wilson MD MSc9, and Jeffrey C. Kwong MD MSc1,2,3,4,10,11 on behalf of the Canadian Immunization Research Network (CIRN) Provincial Collaborative Network (PCN) Investigators Affiliations: 1 ICES, Toronto, ON 2 Dalla Lana School of Public Health, University of Toronto, Toronto, ON 3 Public Health Ontario, ON 4 Centre for Vaccine Preventable Diseases, University of Toronto, Toronto, ON 5 School of Epidemiology and Public Health, University of Ottawa, ON 6 Children’s Hospital of Eastern Ontario Research Institute, Ottawa, ON 7 Institute of Health Policy, Management and Evaluation, University of Toronto, Toronto, ON 8 Women’s College Hospital, Toronto, ON 9 Department of Medicine, University of Ottawa, Ottawa and Bruyere Hospital Research Institutes, Ottawa, ON 10 Department of Family and Community Medicine, University of Toronto, Toronto, ON 11 University Health Network, Toronto, ON Corresponding author: 1 NOTE: This preprint reports new research that has not been certified by peer review and should not be used to guide clinical practice. -
Understanding Variants COVID-19 Vaccine Astrazeneca
Understanding Variants COVID-19 Vaccine AstraZeneca Latest data released Summary of the variant data for COVID-19 Vaccine AstraZeneca It is well known that viruses constantly change through mutation, which can lead to the emergence of new variants. Only those that demonstrate increased transmission or virulence are considered variants of concern. Globally, there are currently four such variants: • B.1.1.7, also known as the UK, or Kent variant • P.1, also known as the Brazilian variant • B.1.351, also known as the South African variant • B.1.617.2, also known as the Indian Variant We now have data – from non-clinical, pre-clinical, and clinical studies, as well as emerging real- world evidence – that demonstrate the effectiveness of COVID-19 Vaccine AstraZeneca against these new variants. No variants have emerged that significantly undermine efficacy of our vaccine against severe disease and hospitalisation. • Clinical studies confirmed the vaccine is effective against the Kent (B.1.1.7) variant, with comparable efficacy to the predominant global strain (the Victoria strain) (VE: 74.6%; CI: 1 The impact of virus variants 41.6% to 88.9%). • In vitro analyses using sera from convalescent individuals that received COVID-19 Vaccine When a virus is circulating widely in a AstraZeneca demonstrate that antibodies from vaccinated individuals were able to neutralise population, it has a greater opportunity to the Brazil (P.1.) variant and the Indian variant (B.1.617.2) to a similar extent as the Victoria replicate. With this, the likelihood that the 2 strain. virus will change a bit, or that variants will 6 • In addition, an early real-world analysis shows for the first time that two doses of COVID-19 appear, also increases. -
Estimates of Trade Between Northern Ireland, Scotland, Wales and England
UK Interregional Trade Estimation: Estimates of trade between Northern Ireland, Scotland, Wales and England Alastair Greig, Mairi Spowage and Graeme Roy ESCoE Discussion Paper 2020-09 June 2020 ISSN 2515-4664 UK Interregional Trade Estimation: Estimates of trade between Northern Ireland, Scotland, Wales and England Alastair Greig, Mairi Spowage and Graeme Roy ESCoE Discussion Paper No. 2020-09 June 2020 Abstract In the UK, there is major economic change such as Brexit on the horizon. The impact of such change is likely to vary across UK regions. There is also a growing demand for improved regional economic analysis to help inform devolution and City Deal-type policymaking. Despite these concerns, there are no comprehensive national statistics on interregional trade in the UK. This paper fills this gap, proposing a framework for estimating interregional trade between the devolved nations of the UK: England, Scotland, Wales, and Northern Ireland. We explain where gaps exist in the current UK data landscape and suggests various ways in which these could be addressed. We then apply our framework using currently available data, presenting initial results for trade between the 4 nations of the UK in 2015. Recommendations for future work are also presented, including the need to evaluate current methods for collecting trade information within the UK. Keywords: Interregional Trade Flows, Regional Supply Use Tables, Trade Surveys, Origin Destination Data JEL classification: F15, F17, R12 Mairi Spowage, Fraser of Allander Institute, University of Strathclyde, [email protected] and Greame Roy, Fraser of Allander Institute, University of Strathclyde, [email protected]. Published by: Economic Statistics Centre of Excellence National Institute of Economic and Social Research 2 Dean Trench St London SW1P 3HE United Kingdom www.escoe.ac.uk ESCoE Discussion Papers describe research in progress by the author(s) and are published to elicit comments and to further debate. -
Research Strategy 2015-2018 Public Health Wales Research Strategy 2015–2018
Research Strategy 2015-2018 Public Health Wales Research Strategy 2015–2018 01 ForewordText Public health covers a broad range of activities. These include primary prevention, surveillance and early detection of disease, control and management of communicable diseases and environmental threats, improving healthcare quality, informing policy and implementing interventions and programmes to improve population health and wellbeing. The public health challenges in Wales are similar Public Health Wales’ Integrated Medium Term Plan Integration between to many post-industrial societies, with an ageing for 2015-2018 clearly identifies a suite of priority population and high prevalence of chronic conditions areas for action. Integration between public health public health research, such as diabetes and cardiovascular disease. Health research, policy and practice will be essential for us policy and practice will be inequalities persist in many areas, and the gap in to drive forward improvements in population health healthy life expectancy between the most and least and wellbeing. We therefore welcome this research essential for us to drive deprived areas is 18 years. For example, 25% of strategy, which aims to develop research capacity forward improvements children aged four to five are overweight or obese, and capability within Public Health Wales. Successful while 22% of adults are obese, with higher prevalence implementation of this strategy over the next three in population health and in more deprived areas. Similar profiles exist for years -
Ultra X 125 England Mandatory Kit List the Following Equipment Is Required by Race Rules: Must Be Carried at All Times During the Race: to Be Left at Camp: 1
ULTRA X 125 ENGLAND MANDATORY KIT LIST THE FOLLOWING EQUIPMENT IS REQUIRED BY RACE RULES: MUST BE CARRIED AT ALL TIMES DURING THE RACE: TO BE LEFT AT CAMP: 1. Suitable running shoes 17. Minimum of 2,000 kcal food per 2. Suitable running socks day (dehydrated or freeze dried 3. Running pack food is highly recommended) 4. Hydration system with capacity for 18. A warm jacket (for the evenings) minimum 1 litre of fluid 19. Sleeping bag (8-14°C at night) 5. A durable water repellent and windproof 20. Camping equipment jacket with taped seams 6. Protective hat/cap 7. Buf/scarf or similar to cover your nose HIGHLY RECOMMENDED: and mouth • Running poles 8. High quality head torch with spare • Sunglasses batteries (red light capability • Electrolyte solutions recommended) • Spork or similar eating utensils 9. Whistle • Pillow 10. Watch (GPS advised but not mandatory) • Roll mat or similar 11. Sun block (minimum strength factor 30, • Portable charger for watch/phone (there although 50+ is recommended) is no access to electricity during the race) 12. Personal basic frst aid kit, including: four • Baby wipes, one pack of 60-100 (consider safety pins, cleansing wipes, antiseptic carrying whilst running for toilet stops) spray or cream, plasters • Shoes for camp (flip flops or similar) 13. Survival bag (not blanket) • Normal clothes and toiletries for pre/ 14. Any medication required post-race and for travelling 15. Minimum of 800 kcal food reserve • Local currency (British Pound Sterling) 16. Fully charged smartphone for food and drinks at the finish line Feel free to bring additional supplies, equipment, or personal items.