Dimensionality Reduction Via Euclidean Distance Embeddings
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Eigenvalues of Euclidean Distance Matrices and Rs-Majorization on R2
Archive of SID 46th Annual Iranian Mathematics Conference 25-28 August 2015 Yazd University 2 Talk Eigenvalues of Euclidean distance matrices and rs-majorization on R pp.: 1{4 Eigenvalues of Euclidean Distance Matrices and rs-majorization on R2 Asma Ilkhanizadeh Manesh∗ Department of Pure Mathematics, Vali-e-Asr University of Rafsanjan Alemeh Sheikh Hoseini Department of Pure Mathematics, Shahid Bahonar University of Kerman Abstract Let D1 and D2 be two Euclidean distance matrices (EDMs) with correspond- ing positive semidefinite matrices B1 and B2 respectively. Suppose that λ(A) = ((λ(A)) )n is the vector of eigenvalues of a matrix A such that (λ(A)) ... i i=1 1 ≥ ≥ (λ(A))n. In this paper, the relation between the eigenvalues of EDMs and those of the 2 corresponding positive semidefinite matrices respect to rs, on R will be investigated. ≺ Keywords: Euclidean distance matrices, Rs-majorization. Mathematics Subject Classification [2010]: 34B15, 76A10 1 Introduction An n n nonnegative and symmetric matrix D = (d2 ) with zero diagonal elements is × ij called a predistance matrix. A predistance matrix D is called Euclidean or a Euclidean distance matrix (EDM) if there exist a positive integer r and a set of n points p1, . , pn r 2 2 { } such that p1, . , pn R and d = pi pj (i, j = 1, . , n), where . denotes the ∈ ij k − k k k usual Euclidean norm. The smallest value of r that satisfies the above condition is called the embedding dimension. As is well known, a predistance matrix D is Euclidean if and 1 1 t only if the matrix B = − P DP with P = I ee , where I is the n n identity matrix, 2 n − n n × and e is the vector of all ones, is positive semidefinite matrix. -
Polynomial Approximation Algorithms for Belief Matrix Maintenance in Identity Management
Polynomial Approximation Algorithms for Belief Matrix Maintenance in Identity Management Hamsa Balakrishnan, Inseok Hwang, Claire J. Tomlin Dept. of Aeronautics and Astronautics, Stanford University, CA 94305 hamsa,ishwang,[email protected] Abstract— Updating probabilistic belief matrices as new might be constrained to some prespecified (but not doubly- observations arrive, in the presence of noise, is a critical part stochastic) row and column sums. This paper addresses the of many algorithms for target tracking in sensor networks. problem of updating belief matrices by scaling in the face These updates have to be carried out while preserving sum constraints, arising for example, from probabilities. This paper of uncertainty in the system and the observations. addresses the problem of updating belief matrices to satisfy For example, consider the case of the belief matrix for a sum constraints using scaling algorithms. We show that the system with three objects (labelled 1, 2 and 3). Suppose convergence behavior of the Sinkhorn scaling process, used that, at some instant, we are unsure about their identities for scaling belief matrices, can vary dramatically depending (tagged X, Y and Z) completely, and our belief matrix is on whether the prior unscaled matrix is exactly scalable or only almost scalable. We give an efficient polynomial-time algo- a 3 × 3 matrix with every element equal to 1/3. Let us rithm based on the maximum-flow algorithm that determines suppose the we receive additional information that object whether a given matrix is exactly scalable, thus determining 3 is definitely Z. Then our prior, but constraint violating the convergence properties of the Sinkhorn scaling process. -
Orthogonal Reduction 1 the Row Echelon Form -.: Mathematical
MATH 5330: Computational Methods of Linear Algebra Lecture 9: Orthogonal Reduction Xianyi Zeng Department of Mathematical Sciences, UTEP 1 The Row Echelon Form Our target is to solve the normal equation: AtAx = Atb ; (1.1) m×n where A 2 R is arbitrary; we have shown previously that this is equivalent to the least squares problem: min jjAx−bjj : (1.2) x2Rn t n×n As A A2R is symmetric positive semi-definite, we can try to compute the Cholesky decom- t t n×n position such that A A = L L for some lower-triangular matrix L 2 R . One problem with this approach is that we're not fully exploring our information, particularly in Cholesky decomposition we treat AtA as a single entity in ignorance of the information about A itself. t m×m In particular, the structure A A motivates us to study a factorization A=QE, where Q2R m×n is orthogonal and E 2 R is to be determined. Then we may transform the normal equation to: EtEx = EtQtb ; (1.3) t m×m where the identity Q Q = Im (the identity matrix in R ) is used. This normal equation is equivalent to the least squares problem with E: t min Ex−Q b : (1.4) x2Rn Because orthogonal transformation preserves the L2-norm, (1.2) and (1.4) are equivalent to each n other. Indeed, for any x 2 R : jjAx−bjj2 = (b−Ax)t(b−Ax) = (b−QEx)t(b−QEx) = [Q(Qtb−Ex)]t[Q(Qtb−Ex)] t t t t t t t t 2 = (Q b−Ex) Q Q(Q b−Ex) = (Q b−Ex) (Q b−Ex) = Ex−Q b : Hence the target is to find an E such that (1.3) is easier to solve. -
Graph Equivalence Classes for Spectral Projector-Based Graph Fourier Transforms Joya A
1 Graph Equivalence Classes for Spectral Projector-Based Graph Fourier Transforms Joya A. Deri, Member, IEEE, and José M. F. Moura, Fellow, IEEE Abstract—We define and discuss the utility of two equiv- Consider a graph G = G(A) with adjacency matrix alence graph classes over which a spectral projector-based A 2 CN×N with k ≤ N distinct eigenvalues and Jordan graph Fourier transform is equivalent: isomorphic equiv- decomposition A = VJV −1. The associated Jordan alence classes and Jordan equivalence classes. Isomorphic equivalence classes show that the transform is equivalent subspaces of A are Jij, i = 1; : : : k, j = 1; : : : ; gi, up to a permutation on the node labels. Jordan equivalence where gi is the geometric multiplicity of eigenvalue 휆i, classes permit identical transforms over graphs of noniden- or the dimension of the kernel of A − 휆iI. The signal tical topologies and allow a basis-invariant characterization space S can be uniquely decomposed by the Jordan of total variation orderings of the spectral components. subspaces (see [13], [14] and Section II). For a graph Methods to exploit these classes to reduce computation time of the transform as well as limitations are discussed. signal s 2 S, the graph Fourier transform (GFT) of [12] is defined as Index Terms—Jordan decomposition, generalized k gi eigenspaces, directed graphs, graph equivalence classes, M M graph isomorphism, signal processing on graphs, networks F : S! Jij i=1 j=1 s ! (s ;:::; s ;:::; s ;:::; s ) ; (1) b11 b1g1 bk1 bkgk I. INTRODUCTION where sij is the (oblique) projection of s onto the Jordan subspace Jij parallel to SnJij. -
Tight Frames and Their Symmetries
Technical Report 9 December 2003 Tight Frames and their Symmetries Richard Vale, Shayne Waldron Department of Mathematics, University of Auckland, Private Bag 92019, Auckland, New Zealand e–mail: [email protected] (http:www.math.auckland.ac.nz/˜waldron) e–mail: [email protected] ABSTRACT The aim of this paper is to investigate symmetry properties of tight frames, with a view to constructing tight frames of orthogonal polynomials in several variables which share the symmetries of the weight function, and other similar applications. This is achieved by using representation theory to give methods for constructing tight frames as orbits of groups of unitary transformations acting on a given finite-dimensional Hilbert space. Along the way, we show that a tight frame is determined by its Gram matrix and discuss how the symmetries of a tight frame are related to its Gram matrix. We also give a complete classification of those tight frames which arise as orbits of an abelian group of symmetries. Key Words: Tight frames, isometric tight frames, Gram matrix, multivariate orthogonal polynomials, symmetry groups, harmonic frames, representation theory, wavelets AMS (MOS) Subject Classifications: primary 05B20, 33C50, 20C15, 42C15, sec- ondary 52B15, 42C40 0 1. Introduction u1 u2 u3 2 The three equally spaced unit vectors u1, u2, u3 in IR provide the following redundant representation 2 3 f = f, u u , f IR2, (1.1) 3 h ji j ∀ ∈ j=1 X which is the simplest example of a tight frame. Such representations arose in the study of nonharmonic Fourier series in L2(IR) (see Duffin and Schaeffer [DS52]) and have recently been used extensively in the theory of wavelets (see, e.g., Daubechies [D92]). -
On the Eigenvalues of Euclidean Distance Matrices
“main” — 2008/10/13 — 23:12 — page 237 — #1 Volume 27, N. 3, pp. 237–250, 2008 Copyright © 2008 SBMAC ISSN 0101-8205 www.scielo.br/cam On the eigenvalues of Euclidean distance matrices A.Y. ALFAKIH∗ Department of Mathematics and Statistics University of Windsor, Windsor, Ontario N9B 3P4, Canada E-mail: [email protected] Abstract. In this paper, the notion of equitable partitions (EP) is used to study the eigenvalues of Euclidean distance matrices (EDMs). In particular, EP is used to obtain the characteristic poly- nomials of regular EDMs and non-spherical centrally symmetric EDMs. The paper also presents methods for constructing cospectral EDMs and EDMs with exactly three distinct eigenvalues. Mathematical subject classification: 51K05, 15A18, 05C50. Key words: Euclidean distance matrices, eigenvalues, equitable partitions, characteristic poly- nomial. 1 Introduction ( ) An n ×n nonzero matrix D = di j is called a Euclidean distance matrix (EDM) 1, 2,..., n r if there exist points p p p in some Euclidean space < such that i j 2 , ,..., , di j = ||p − p || for all i j = 1 n where || || denotes the Euclidean norm. i , ,..., Let p , i ∈ N = {1 2 n}, be the set of points that generate an EDM π π ( , ,..., ) D. An m-partition of D is an ordered sequence = N1 N2 Nm of ,..., nonempty disjoint subsets of N whose union is N. The subsets N1 Nm are called the cells of the partition. The n-partition of D where each cell consists #760/08. Received: 07/IV/08. Accepted: 17/VI/08. ∗Research supported by the Natural Sciences and Engineering Research Council of Canada and MITACS. -
Smith Normal Formal of Distance Matrix of Block Graphs∗†
Ann. of Appl. Math. 32:1(2016); 20-29 SMITH NORMAL FORMAL OF DISTANCE MATRIX OF BLOCK GRAPHS∗y Jing Chen1;2,z Yaoping Hou2 (1. The Center of Discrete Math., Fuzhou University, Fujian 350003, PR China; 2. School of Math., Hunan First Normal University, Hunan 410205, PR China) Abstract A connected graph, whose blocks are all cliques (of possibly varying sizes), is called a block graph. Let D(G) be its distance matrix. In this note, we prove that the Smith normal form of D(G) is independent of the interconnection way of blocks and give an explicit expression for the Smith normal form in the case that all cliques have the same size, which generalize the results on determinants. Keywords block graph; distance matrix; Smith normal form 2000 Mathematics Subject Classification 05C50 1 Introduction Let G be a connected graph (or strong connected digraph) with vertex set f1; 2; ··· ; ng. The distance matrix D(G) is an n × n matrix in which di;j = d(i; j) denotes the distance from vertex i to vertex j: Like the adjacency matrix and Lapla- cian matrix of a graph, D(G) is also an integer matrix and there are many results on distance matrices and their applications. For distance matrices, Graham and Pollack [10] proved a remarkable result that gives a formula of the determinant of the distance matrix of a tree depend- ing only on the number n of vertices of the tree. The determinant is given by det D = (−1)n−1(n − 1)2n−2: This result has attracted much interest in algebraic graph theory. -
EUCLIDEAN DISTANCE MATRIX COMPLETION PROBLEMS June 6
EUCLIDEAN DISTANCE MATRIX COMPLETION PROBLEMS HAW-REN FANG∗ AND DIANNE P. O’LEARY† June 6, 2010 Abstract. A Euclidean distance matrix is one in which the (i, j) entry specifies the squared distance between particle i and particle j. Given a partially-specified symmetric matrix A with zero diagonal, the Euclidean distance matrix completion problem (EDMCP) is to determine the unspecified entries to make A a Euclidean distance matrix. We survey three different approaches to solving the EDMCP. We advocate expressing the EDMCP as a nonconvex optimization problem using the particle positions as variables and solving using a modified Newton or quasi-Newton method. To avoid local minima, we develop a randomized initial- ization technique that involves a nonlinear version of the classical multidimensional scaling, and a dimensionality relaxation scheme with optional weighting. Our experiments show that the method easily solves the artificial problems introduced by Mor´e and Wu. It also solves the 12 much more difficult protein fragment problems introduced by Hen- drickson, and the 6 larger protein problems introduced by Grooms, Lewis, and Trosset. Key words. distance geometry, Euclidean distance matrices, global optimization, dimensional- ity relaxation, modified Cholesky factorizations, molecular conformation AMS subject classifications. 49M15, 65K05, 90C26, 92E10 1. Introduction. Given the distances between each pair of n particles in Rr, n r, it is easy to determine the relative positions of the particles. In many applications,≥ though, we are given only some of the distances and we would like to determine the missing distances and thus the particle positions. We focus in this paper on algorithms to solve this distance completion problem. -
Week 8-9. Inner Product Spaces. (Revised Version) Section 3.1 Dot Product As an Inner Product
Math 2051 W2008 Margo Kondratieva Week 8-9. Inner product spaces. (revised version) Section 3.1 Dot product as an inner product. Consider a linear (vector) space V . (Let us restrict ourselves to only real spaces that is we will not deal with complex numbers and vectors.) De¯nition 1. An inner product on V is a function which assigns a real number, denoted by < ~u;~v> to every pair of vectors ~u;~v 2 V such that (1) < ~u;~v>=< ~v; ~u> for all ~u;~v 2 V ; (2) < ~u + ~v; ~w>=< ~u;~w> + < ~v; ~w> for all ~u;~v; ~w 2 V ; (3) < k~u;~v>= k < ~u;~v> for any k 2 R and ~u;~v 2 V . (4) < ~v;~v>¸ 0 for all ~v 2 V , and < ~v;~v>= 0 only for ~v = ~0. De¯nition 2. Inner product space is a vector space equipped with an inner product. Pn It is straightforward to check that the dot product introduces by ~u ¢ ~v = j=1 ujvj is an inner product. You are advised to verify all the properties listed in the de¯nition, as an exercise. The dot product is also called Euclidian inner product. De¯nition 3. Euclidian vector space is Rn equipped with Euclidian inner product < ~u;~v>= ~u¢~v. De¯nition 4. A square matrix A is called positive de¯nite if ~vT A~v> 0 for any vector ~v 6= ~0. · ¸ 2 0 Problem 1. Show that is positive de¯nite. 0 3 Solution: Take ~v = (x; y)T . Then ~vT A~v = 2x2 + 3y2 > 0 for (x; y) 6= (0; 0). -
Gram Matrix and Orthogonality in Frames 1
U.P.B. Sci. Bull., Series A, Vol. 80, Iss. 1, 2018 ISSN 1223-7027 GRAM MATRIX AND ORTHOGONALITY IN FRAMES Abolhassan FEREYDOONI1 and Elnaz OSGOOEI 2 In this paper, we aim at introducing a criterion that determines if f figi2I is a Bessel sequence, a frame or a Riesz sequence or not any of these, based on the norms and the inner products of the elements in f figi2I. In the cases of Riesz and Bessel sequences, we introduced a criterion but in the case of a frame, we did not find any answers. This criterion will be shown by K(f figi2I). Using the criterion introduced, some interesting extensions of orthogonality will be presented. Keywords: Frames, Bessel sequences, Orthonormal basis, Riesz bases, Gram matrix MSC2010: Primary 42C15, 47A05. 1. Preliminaries Frames are generalizations of orthonormal bases, but, more than orthonormal bases, they have shown their ability and stability in the representation of functions [1, 4, 10, 11]. The frames have been deeply studied from an abstract point of view. The results of such studies have been used in concrete frames such as Gabor and Wavelet frames which are very important from a practical point of view [2, 9, 5, 8]. An orthonormal set feng in a Hilbert space is characterized by a simple relation hem;eni = dm;n: In the other words, the Gram matrix is the identity matrix. Moreover, feng is an orthonor- mal basis if spanfeng = H. But, for frames the situation is more complicated; i.e., the Gram Matrix has no such a simple form. -
Uniqueness of Low-Rank Matrix Completion by Rigidity Theory
UNIQUENESS OF LOW-RANK MATRIX COMPLETION BY RIGIDITY THEORY AMIT SINGER∗ AND MIHAI CUCURINGU† Abstract. The problem of completing a low-rank matrix from a subset of its entries is often encountered in the analysis of incomplete data sets exhibiting an underlying factor model with applications in collaborative filtering, computer vision and control. Most recent work had been focused on constructing efficient algorithms for exact or approximate recovery of the missing matrix entries and proving lower bounds for the number of known entries that guarantee a successful recovery with high probability. A related problem from both the mathematical and algorithmic point of view is the distance geometry problem of realizing points in a Euclidean space from a given subset of their pairwise distances. Rigidity theory answers basic questions regarding the uniqueness of the realization satisfying a given partial set of distances. We observe that basic ideas and tools of rigidity theory can be adapted to determine uniqueness of low-rank matrix completion, where inner products play the role that distances play in rigidity theory. This observation leads to efficient randomized algorithms for testing necessary and sufficient conditions for local completion and for testing sufficient conditions for global completion. Crucial to our analysis is a new matrix, which we call the completion matrix, that serves as the analogue of the rigidity matrix. Key words. Low rank matrices, missing values, rigidity theory, iterative methods, collaborative filtering. AMS subject classifications. 05C10, 05C75, 15A48 1. Introduction. Can the missing entries of an incomplete real valued matrix be recovered? Clearly, a matrix can be completed in an infinite number of ways by replacing the missing entries with arbitrary values. -
4.1 RANK of a MATRIX Rank List Given Matrix M, the Following Are Equal
page 1 of Section 4.1 CHAPTER 4 MATRICES CONTINUED SECTION 4.1 RANK OF A MATRIX rank list Given matrix M, the following are equal: (1) maximal number of ind cols (i.e., dim of the col space of M) (2) maximal number of ind rows (i.e., dim of the row space of M) (3) number of cols with pivots in the echelon form of M (4) number of nonzero rows in the echelon form of M You know that (1) = (3) and (2) = (4) from Section 3.1. To see that (3) = (4) just stare at some echelon forms. This one number (that all four things equal) is called the rank of M. As a special case, a zero matrix is said to have rank 0. how row ops affect rank Row ops don't change the rank because they don't change the max number of ind cols or rows. example 1 12-10 24-20 has rank 1 (maximally one ind col, by inspection) 48-40 000 []000 has rank 0 example 2 2540 0001 LetM= -2 1 -1 0 21170 To find the rank of M, use row ops R3=R1+R3 R4=-R1+R4 R2ØR3 R4=-R2+R4 2540 0630 to get the unreduced echelon form 0001 0000 Cols 1,2,4 have pivots. So the rank of M is 3. how the rank is limited by the size of the matrix IfAis7≈4then its rank is either 0 (if it's the zero matrix), 1, 2, 3 or 4. The rank can't be 5 or larger because there can't be 5 ind cols when there are only 4 cols to begin with.