Evolution of Cytokinesis-Related Protein Localization During The
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Flagellar, Cellular and Organismal Polarity in Volvox Carteri
SUNY Geneseo KnightScholar Biology Faculty/Staff Works Department of Biology 1993 Flagellar, cellular and organismal polarity in Volvox carteri Harold J. Hoops SUNY Geneseo Follow this and additional works at: https://knightscholar.geneseo.edu/biology Recommended Citation Hoops H.J. (1993) Flagellar, cellular and organismal polarity in Volvox carteri. Journal of Cell Science 104: 105-117. doi: This Article is brought to you for free and open access by the Department of Biology at KnightScholar. It has been accepted for inclusion in Biology Faculty/Staff Works by an authorized administrator of KnightScholar. For more information, please contact [email protected]. Journal of Cell Science 104, 105-117 (1993) 105 Printed in Great Britain © The Company of Biologists Limited 1993 Flagellar, cellular and organismal polarity in Volvox carteri Harold J. Hoops Department of Biology, 1 Circle Drive, SUNY-Genesco, Genesco, NY 14454, USA SUMMARY It has previously been shown that the flagellar appara- reorientation of flagellar apparatus components. This tus of the mature Volvox carteri somatic cell lacks the reorientation also results in the movement of the eye- 180˚ rotational symmetry typical of most unicellular spot from a position nearer one of the flagellar bases to green algae. This asymmetry has been postulated to be a position approximately equidistant between them. By the result of rotation of each half of the flagellar appa- analogy to Chlamydomonas, the anti side of the V. car - ratus. Here it is shown that V. carteri axonemes contain teri somatic cell faces the spheroid anterior, the syn side polarity markers that are similar to those found in faces the spheroid posterior. -
Algal Sex Determination and the Evolution of Anisogamy James Umen, Susana Coelho
Algal Sex Determination and the Evolution of Anisogamy James Umen, Susana Coelho To cite this version: James Umen, Susana Coelho. Algal Sex Determination and the Evolution of Anisogamy. Annual Review of Microbiology, Annual Reviews, 2019, 73 (1), 10.1146/annurev-micro-020518-120011. hal- 02187088 HAL Id: hal-02187088 https://hal.sorbonne-universite.fr/hal-02187088 Submitted on 17 Jul 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Annu. Rev. Microbiol. 2019. 73:X–X https://doi.org/10.1146/annurev-micro-020518-120011 Copyright © 2019 by Annual Reviews. All rights reserved Umen • Coelho www.annualreviews.org • Algal Sexes and Mating Systems Algal Sex Determination and the Evolution of Anisogamy James Umen1 and Susana Coelho2 1Donald Danforth Plant Science Center, St. Louis, Missouri 63132, USA; email: [email protected] 2Sorbonne Université, UPMC Université Paris 06, CNRS, Algal Genetics Group, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, CS 90074, F-29688, Roscoff, France [**AU: Please write the entire affiliation in French or write it all in English, rather than a combination of English and French**] ; email: [email protected] Abstract Algae are photosynthetic eukaryotes whose taxonomic breadth covers a range of life histories, degrees of cellular and developmental complexity, and diverse patterns of sexual reproduction. -
Lateral Gene Transfer of Anion-Conducting Channelrhodopsins Between Green Algae and Giant Viruses
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042127; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 5 Lateral gene transfer of anion-conducting channelrhodopsins between green algae and giant viruses Andrey Rozenberg 1,5, Johannes Oppermann 2,5, Jonas Wietek 2,3, Rodrigo Gaston Fernandez Lahore 2, Ruth-Anne Sandaa 4, Gunnar Bratbak 4, Peter Hegemann 2,6, and Oded 10 Béjà 1,6 1Faculty of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel. 2Institute for Biology, Experimental Biophysics, Humboldt-Universität zu Berlin, Invalidenstraße 42, Berlin 10115, Germany. 3Present address: Department of Neurobiology, Weizmann 15 Institute of Science, Rehovot 7610001, Israel. 4Department of Biological Sciences, University of Bergen, N-5020 Bergen, Norway. 5These authors contributed equally: Andrey Rozenberg, Johannes Oppermann. 6These authors jointly supervised this work: Peter Hegemann, Oded Béjà. e-mail: [email protected] ; [email protected] 20 ABSTRACT Channelrhodopsins (ChRs) are algal light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity 1,2. Four ChR families are currently known. Green algal 3–5 and cryptophyte 6 cation-conducting ChRs (CCRs), cryptophyte anion-conducting ChRs (ACRs) 7, and the MerMAID ChRs 8. Here we 25 report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal prasinophyte hosts. -
A Taxonomic Reassessment of Chlamydomonas Meslinii (Volvocales, Chlorophyceae) with a Description of Paludistella Gen.Nov
Phytotaxa 432 (1): 065–080 ISSN 1179-3155 (print edition) https://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2020 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.432.1.6 A taxonomic reassessment of Chlamydomonas meslinii (Volvocales, Chlorophyceae) with a description of Paludistella gen.nov. HANI SUSANTI1,6, MASAKI YOSHIDA2, TAKESHI NAKAYAMA2, TAKASHI NAKADA3,4 & MAKOTO M. WATANABE5 1Life Science Innovation, School of Integrative and Global Major, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8577, Japan. 2Faculty of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba 305-8577, Japan. 3Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata, 997-0052, Japan. 4Systems Biology Program, Graduate School of Media and Governance, Keio University, Fujisawa, Kanagawa, 252-8520, Japan. 5Algae Biomass Energy System Development and Research Center, University of Tsukuba. 6Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor KM 46 Cibinong West Java, Indonesia. Corresponding author: [email protected] Abstract Chlamydomonas (Volvocales, Chlorophyceae) is a large polyphyletic genus that includes numerous species that should be classified into independent genera. The present study aimed to examine the authentic strain of Chlamydomonas meslinii and related strains based on morphological and molecular data. All the strains possessed an asteroid chloroplast with a central pyrenoid and hemispherical papilla; however, they were different based on cell and stigmata shapes. Molecular phylogenetic analyses based on 18S rDNA, atpB, and psaB indicated that the strains represented a distinct subclade in the clade Chloromonadinia. The secondary structure of ITS-2 supported the separation of the strains into four species. -
Phylogenetic Analysis and Substitution Rate Estimation of Colonial Volvocine Algae Based on Mitochondrial Genomes
G C A T T A C G G C A T genes Article Phylogenetic Analysis and Substitution Rate Estimation of Colonial Volvocine Algae Based on Mitochondrial Genomes Yuxin Hu 1,2, Weiyue Xing 1,2, Zhengyu Hu 3 and Guoxiang Liu 1,* 1 Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China; [email protected] (Y.H.); [email protected] (W.X.) 2 School of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China 3 State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China; [email protected] * Correspondence: [email protected]; Tel.: +86-027-6878-0576 Received: 11 December 2019; Accepted: 15 January 2020; Published: 20 January 2020 Abstract: We sequenced the mitochondrial genome of six colonial volvocine algae, namely: Pandorina morum, Pandorina colemaniae, Volvulina compacta, Colemanosphaera angeleri, Colemanosphaera charkowiensi, and Yamagishiella unicocca. Previous studies have typically reconstructed the phylogenetic relationship between colonial volvocine algae based on chloroplast or nuclear genes. Here, we explore the validity of phylogenetic analysis based on mitochondrial protein-coding genes. Wefound phylogenetic incongruence of the genera Yamagishiella and Colemanosphaera. In Yamagishiella, the stochastic error and linkage group formed by the mitochondrial protein-coding genes prevent phylogenetic analyses from reflecting the true relationship. In Colemanosphaera, a different reconstruction approach revealed a different phylogenetic relationship. This incongruence may be because of the influence of biological factors, such as incomplete lineage sorting or horizontal gene transfer. We also analyzed the substitution rates in the mitochondrial and chloroplast genomes between colonial volvocine algae. -
Evolution of the Two Sexes Under Internal Fertilization and Alternative Evolutionary Pathways
vol. 193, no. 5 the american naturalist may 2019 Evolution of the Two Sexes under Internal Fertilization and Alternative Evolutionary Pathways Jussi Lehtonen1,* and Geoff A. Parker2 1. School of Life and Environmental Sciences, Faculty of Science, University of Sydney, Sydney, 2006 New South Wales, Australia; and Evolution and Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, 2052 New South Wales, Australia; 2. Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, United Kingdom Submitted September 8, 2018; Accepted November 30, 2018; Electronically published March 18, 2019 Online enhancements: supplemental material. abstract: ogy. It generates the two sexes, males and females, and sexual Transition from isogamy to anisogamy, hence males and fl females, leads to sexual selection, sexual conflict, sexual dimorphism, selection and sexual con ict develop from it (Darwin 1871; and sex roles. Gamete dynamics theory links biophysics of gamete Bateman 1948; Parker et al. 1972; Togashi and Cox 2011; limitation, gamete competition, and resource requirements for zygote Parker 2014; Lehtonen et al. 2016; Hanschen et al. 2018). survival and assumes broadcast spawning. It makes testable predic- The volvocine green algae are classically the group used to tions, but most comparative tests use volvocine algae, which feature study both the evolution of multicellularity (e.g., Kirk 2005; internal fertilization. We broaden this theory by comparing broadcast- Herron and Michod 2008) and transitions from isogamy to spawning predictions with two plausible internal-fertilization scenarios: gamete casting/brooding (one mating type retains gametes internally, anisogamy and oogamy (e.g., Knowlton 1974; Bell 1982; No- the other broadcasts them) and packet casting/brooding (one type re- zaki 1996; da Silva 2018; da Silva and Drysdale 2018; Han- tains gametes internally, the other broadcasts packets containing gametes, schen et al. -
Chlamydomonas Schloesseri Sp. Nov. (Chlamydophyceae, Chlorophyta) Revealed by Morphology, Autolysin Cross Experiments, and Multiple Gene Analyses
Phytotaxa 362 (1): 021–038 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2018 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.362.1.2 Chlamydomonas schloesseri sp. nov. (Chlamydophyceae, Chlorophyta) revealed by morphology, autolysin cross experiments, and multiple gene analyses THOMAS PRÖSCHOLD1, TATYANA DARIENKO2,3, LOTHAR KRIENITZ4 & ANNETTE W. COLEMAN5 1 University of Innsbruck, Research Department for Limnology, A-5310 Mondsee, Austria 2 University of Göttingen, Experimental Phycology and Culture Collection of Algae, D-37073 Göttingen, Germany 3 M.G. Kholodny Institute of Botany, National Academy Science of Ukraine, Kyiv 01601, Ukraine 4 Leibniz Institute of Freshwater Ecology and Inland Fisheries, Department of Limnology of Stratified Lakes, D-16775 Stechlin-Neu- globsow, Germany 5 Brown University, Division of Biology and Medicine, Providence RI-02912, USA Correspondence: Thomas Pröschold, E-mail: [email protected] Abstract Chlamydomonas in the traditional sense is one of the largest green algal genera, comprising more than 500 described species. However, since the designation of the model organism C. reinhardtii as conserved type of this genus in 2007, only two spe- cies remained in Chlamydomonas. Investigations of three new strains isolated from soil samples, which were collected near Lake Nakuru (Kenya), demonstrated that the isolates represent a new species of Chlamydomonas. Phylogenetic analyses of nuclear SSU and ITS rDNA and plastid-coding rbcL sequences have clearly revealed that this species is closely related to C. reinhardtii and C. incerta. These results were confirmed by cross experiments of sporangium wall autolysins (VLE). All species belonged to the VLE group 1 sensu Schlösser. -
Parallel Evolution of Highly Conserved Plastid Genome Architecture in Red Seaweeds and Seed Plants
Lee et al. BMC Biology (2016) 14:75 DOI 10.1186/s12915-016-0299-5 RESEARCH ARTICLE Open Access Parallel evolution of highly conserved plastid genome architecture in red seaweeds and seed plants JunMo Lee1, Chung Hyun Cho1, Seung In Park1, Ji Won Choi1, Hyun Suk Song1, John A. West2, Debashish Bhattacharya3† and Hwan Su Yoon1*† Abstract Background: The red algae (Rhodophyta) diverged from the green algae and plants (Viridiplantae) over one billion years ago within the kingdom Archaeplastida. These photosynthetic lineages provide an ideal model to study plastid genome reduction in deep time. To this end, we assembled a large dataset of the plastid genomes that were available, including 48 from the red algae (17 complete and three partial genomes produced for this analysis) to elucidate the evolutionary history of these organelles. Results: We found extreme conservation of plastid genome architecture in the major lineages of the multicellular Florideophyceae red algae. Only three minor structural types were detected in this group, which are explained by recombination events of the duplicated rDNA operons. A similar high level of structural conservation (although with different gene content) was found in seed plants. Three major plastid genome architectures were identified in representatives of 46 orders of angiosperms and three orders of gymnosperms. Conclusions: Our results provide a comprehensive account of plastid gene loss and rearrangement events involving genome architecture within Archaeplastida and lead to one over-arching conclusion: from an ancestral pool of highly rearranged plastid genomes in red and green algae, the aquatic (Florideophyceae) and terrestrial (seed plants) multicellular lineages display high conservation in plastid genome architecture. -
Chlamydomonas Schloesseri Sp. Nov. (Chlamydophyceae, Chlorophyta) Revealed by Morphology, Autolysin Cross Experiments, and Multiple Gene Analyses
Phytotaxa 362 (1): 021–038 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2018 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.362.1.2 Chlamydomonas schloesseri sp. nov. (Chlamydophyceae, Chlorophyta) revealed by morphology, autolysin cross experiments, and multiple gene analyses THOMAS PRÖSCHOLD1, TATYANA DARIENKO2,3, LOTHAR KRIENITZ4 & ANNETTE W. COLEMAN5 1 University of Innsbruck, Research Department for Limnology, A-5310 Mondsee, Austria 2 University of Göttingen, Experimental Phycology and Culture Collection of Algae, D-37073 Göttingen, Germany 3 M.G. Kholodny Institute of Botany, National Academy Science of Ukraine, Kyiv 01601, Ukraine 4 Leibniz Institute of Freshwater Ecology and Inland Fisheries, Department of Limnology of Stratified Lakes, D-16775 Stechlin-Neu- globsow, Germany 5 Brown University, Division of Biology and Medicine, Providence RI-02912, USA Correspondence: Thomas Pröschold, E-mail: [email protected] Abstract Chlamydomonas in the traditional sense is one of the largest green algal genera, comprising more than 500 described species. However, since the designation of the model organism C. reinhardtii as conserved type of this genus in 2007, only two spe- cies remained in Chlamydomonas. Investigations of three new strains isolated from soil samples, which were collected near Lake Nakuru (Kenya), demonstrated that the isolates represent a new species of Chlamydomonas. Phylogenetic analyses of nuclear SSU and ITS rDNA and plastid-coding rbcL sequences have clearly revealed that this species is closely related to C. reinhardtii and C. incerta. These results were confirmed by cross experiments of sporangium wall autolysins (VLE). All species belonged to the VLE group 1 sensu Schlösser. -
New and Rare Species of Volvocaceae (Chlorophyta) in the Polish Phycoflora
Acta Societatis Botanicorum Poloniae Journal homepage: pbsociety.org.pl/journals/index.php/asbp ORIGINAL RESEARCH PAPER Received: 2013.06.25 Accepted: 2013.12.15 Published electronically: 2013.12.20 Acta Soc Bot Pol 82(4):259–266 DOI: 10.5586/asbp.2013.038 New and rare species of Volvocaceae (Chlorophyta) in the Polish phycoflora Ewa Anna Dembowska* Department of Hydrobiology, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland Abstract Seven species of Volvocaceae were recorded in the lower Vistula River and its oxbow lakes, including Pleodorina californica for the first time in Poland. Three species – Eudorina cylindrica, E. illinoisensis and E. unicocca – were found in the Polish Vistula River in the 1960s and 1970s, as well as at present. They are rare species in the Polish aquatic ecosystems. Three species are com- mon both in the oxbow lakes and in the Vistula River: Eudorina elegans, Pandorina morum and Volvox aureus. New and rare Volvocaceae species were described in terms of morphology and ecology; also photographic documentation (light microscope microphotographs) was completed. Keywords: Pleodorina, Pandorina, Eudorina, biodiversity, phytoplankton, oxbow lake, lower Vistula Introduction Green algae from the family of Volvocaceae are frequently encountered in eutrophic waters. All species from this family The family of Volvocaceae (Chlorophyta, Volvocales) com- live in fresh waters: lakes, ponds, rivers, and even puddles. prises 7 genera: Eudorina, Pandorina, Platydorina, Pleodorina, Coleman [1] reports that out of ca. 200 colonial Volvocaceae Volvox, Volvulina and Yamagishiella [1]. The genera Astre- in culture collections, ~1/3 came from puddles, ~1/3 – from phomene and Gonium were excluded from Volvocaceae and they lakes and rice fields, and ~1/3 – from zygotes in soil samples form new families: Goniaceae – based on the ultrastructure of from watersides. -
The Phosphatidylethanolamine-Binding Protein DTH1 Mediates Degradation of Lipid Droplets in Chlamydomonas Reinhardtii
The phosphatidylethanolamine-binding protein DTH1 mediates degradation of lipid droplets in Chlamydomonas reinhardtii Jihyeon Leea, Yasuyo Yamaokab, Fantao Kongc, Caroline Cagnond, Audrey Beyly-Adrianod, Sunghoon Jangb, Peng Gaoe, Byung-Ho Kange, Yonghua Li-Beissond,1, and Youngsook Leeb,1 aDivision of Integrative Biosciences and Biotechnology, Pohang University of Science and Technology, 37673 Pohang, Korea; bDepartment of Life Sciences, Pohang University of Science and Technology, 37673 Pohang, Korea; cLaboratory of Marine Biotechnology, School of Bioengineering, Dalian University of Technology, 116024 Dalian, China; dAix-Marseille University, The Commission for Atomic Energy and Alternative Energies (CEA), CNRS, Institut de Biosciences et Biotechnologies Aix-Marseille (BIAM), CEA Cadarache, Saint Paul-Lez-Durance 13108, France; and eState Key Laboratory of Agrobiotechnology, School of Life Sciences, The Chinese University of Hong Kong, New Territories, Hong Kong 999077, China Edited by Krishna K. Niyogi, University of California, Berkeley, CA, and approved August 3, 2020 (received for review March 27, 2020) Lipid droplets (LDs) are intracellular organelles found in a wide plant (17), and ∼200 in the model green microalga Chlamydo- range of organisms and play important roles in stress tolerance. monas reinhardtii (18–20). LD-associated proteins fall into sev- During nitrogen (N) starvation, Chlamydomonas reinhardtii stores eral major functional groups: 1) major structural proteins such as large amounts of triacylglycerols (TAGs) inside LDs. When N is oleosin, perilipin, and the major lipid droplet protein (MLDP) resupplied, the LDs disappear and the TAGs are degraded, presum- (2, 18, 21); 2) TAG biosynthetic enzymes, e.g., diacylglycerol ably providing carbon and energy for regrowth. The mechanism acyltransferases (DGATs) (3, 22, 23) and phospholipid:diacyl- by which cells degrade LDs is poorly understood. -
Current Biology
Current Biology Insights into the Evolution of Multicellularity from the Sea Lettuce Genome --Manuscript Draft-- Manuscript Number: CURRENT-BIOLOGY-D-18-00475R1 Full Title: Insights into the Evolution of Multicellularity from the Sea Lettuce Genome Article Type: Research Article Corresponding Author: Olivier De Clerck Ghent University Ghent, BELGIUM First Author: Olivier De Clerck Order of Authors: Olivier De Clerck Shu-Min Kao Kenny A. Bogaert Jonas Blomme Fatima Foflonker Michiel Kwantes Emmelien Vancaester Lisa Vanderstraeten Eylem Aydogdu Jens Boesger Gianmaria Califano Benedicte Charrier Rachel Clewes Andrea Del Cortona Sofie D'Hondt Noe Fernandez-Pozo Claire M. Gachon Marc Hanikenne Linda Lattermann Frederik Leliaert Xiaojie Liu Christine A. Maggs Zoe A. Popper John A. Raven Michiel Van Bel Per K.I. Wilhelmsson Debashish Bhattacharya Juliet C. Coates Stefan A. Rensing Dominique Van Der Straeten Powered by Editorial Manager® and ProduXion Manager® from Aries Systems Corporation Assaf Vardi Lieven Sterck Klaas Vandepoele Yves Van de Peer Thomas Wichard John H. Bothwell Abstract: We report here the 98.5 Mbp haploid genome (12,924 protein coding genes) of Ulva mutabilis, a ubiquitous and iconic representative of the Ulvophyceae or green seaweeds. Ulva's rapid and abundant growth makes it a key contributor to coastal biogeochemical cycles; its role in marine sulfur cycles is particularly important because it produces high levels of dimethylsulfoniopropionate (DMSP), the main precursor of volatile dimethyl sulfide (DMS). Rapid growth makes Ulva attractive biomass feedstock, but also increasingly a driver of nuisance 'green tides'. Additionally, ulvophytes are key to understanding evolution of multicellularity in the green lineage. Furthermore, morphogenesis is dependent on bacterial signals, making it an important species to study cross-kingdom communication.