Niche Evolution Evolutionary Biology Oxford Bibliographies
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8/23/2016 Niche Evolution Evolutionary Biology Oxford Bibliographies Niche Evolution Alex Pyron LAST MODIFIED: 26 MAY 2016 DOI: 10.1093/OBO/97801999417280075 Introduction The evolution of species’ niches is a process that is fundamental to investigations in numerous fields of biology, including speciation, community assembly, and longterm regional and global diversification processes. It forms the nexus between ecological and evolutionary questions. Topics as diverse as ecological speciation, niche conservatism, species coexistence, and historical biogeography all rely on interpreting patterns and drivers of species’ niches through time and across landscapes. Despite this importance, a distinct research agenda concerning niche evolution as a discrete topic of inquiry has yet to emerge. Niche evolution is often considered as a sidebar or of secondary importance when addressing questions such as “how did two species diverge?” Basic questions such as “what is a niche,” “what is the biological basis of niche evolution,” “at what scale should we evaluate niche evolution,” and “how can we observe niche evolution at different timescales” have rarely been addressed directly, or not at all in some systems. However, various intellectual threads connecting these ideas are evident in a number of recent and historical publications, giving some semblance of form to a framework for interpreting and evaluating niche evolution, and outlining major areas for future research from an evolutionary perspective. There is a reverse perspective from the macroecological scale as well, with questions involving coexistence, distributions and ranges, food webs, and other organismal attributes. General Overview Niche evolution has rarely, if ever, been addressed in depth as a standalone topic. Instead, much of the conceptual development in literature is intertwined with that of speciation, ecology, and diversification. Mayr 1942 provided the original background material for recent developments, during the Modern Synthesis. Williams 1966 focuses on adaptation at the individual and population level in a theoretical context, providing the necessary background to interpret processes of niche evolution. Schluter 2000 describes the ecological basis of adaptive evolutionary radiations, and how niche evolution drives ecomorphological diversification. Chase and Leibold 2003 is a classic treatise on what a niche is, and how to interpret niche concepts in practice. OdlingSmee, et al. 2003 approaches niche evolution from the perspective of the individual interacting with its environment, and the process of niche construction. Coyne and Orr 2004 covers the various mechanisms that drive speciation, which includes heavy focus on ecological isolation and niche evolution. Losos 2009 is a case study of niche evolution in the classic modelsystem Anolis. Finally, Peterson, et al. 2011 covers a profusion of methodological approaches to understanding niche evolution. Chase, J. M., and M. A. Leibold. 2003. Ecological niches: Linking classical and contemporary approaches. Chicago: Univ. of Chicago Press. A more indepth look at some of the issues described in this section, including niche concepts and individual, population, and species level considerations both in an ecological and evolutionary context. This is a fundamental starting place for niche evolution. Coyne, J. A., and H. A. Orr. 2004. Speciation. Sunderland, MA: Sinauer. http://www.oxfordbibliographies.com/view/document/obo9780199941728/obo97801999417280075.xml?rskey=WDTkgc&result=51&print 1/20 8/23/2016 Niche Evolution Evolutionary Biology Oxford Bibliographies One of the major overviews of speciation processes, and the ecological factors that can underlie lineage divergence leading to speciation. In particular, chapter 5 (“Ecological Isolation”) details nicherelated processes such as habitat, pollinator, and temporal isolation. However, these are considered in a more static context, rather than how they, themselves, evolve over time. Losos, J. B. 2009. Lizards in an evolutionary tree. Berkeley: Univ. of California Press. For empirical case studies of adaptive nicheevolution, few vertebrate systems have been investigated as fully as West Indian Anolis lizards. Losos reviews and synthesizes available studies, with particular emphasis on climatic and ecomorphological adaptations these lizards have developed to occupy novel nichespaces. Mayr, E. 1942. Systematics and the origin of species. New York: Columbia Univ. Press. A landmark in evolutionary biology and the study of speciation. Of particular interest here is the focus on geographic variation in species’ attributes such as habitat preference, and how this can lead to population divergence and speciation over time. Importantly, a genetic basis of ecological characteristics, and the accumulation of mutations related to this, is recognized as a key driver of speciation, implicitly via niche evolution. Lacking, however, is an explicit mechanistic link between these concepts. OdlingSmee, F. J., K. N. Laland, and M. W. Feldman. 2003. Niche construction: The neglected process in evolution. Princeton, NJ: Princeton Univ. Press. As reviewed empirically in other studies cited here, the ability of species to modify their immediate environments and their overall ecological niches is an underappreciated force in the diversification of lineages. The authors review the evidence and implications of niche construction for a broad range of ecological and evolutionary questions. Peterson, A. T., J. Soberon, R. G. Pearson, et al. 2011. Ecological niches and geographic distributions. Princeton, NJ: Princeton Univ. Press. A crucial text covering more recent developments in the quantitative analysis of species’ niches, with a particular focus on modeling and predicting species’ niches and distributions using modern computational techniques. Includes background material from many of the references listed in this section with respect to niche concepts, and how niches may change over shorter timescales. In contrast, the authors do not heavily feature a historical perspective, or much address how niche evolution through time affects presentday distributions. Schluter, D. 2000. The ecology of adaptive radiation. Oxford: Oxford Univ. Press. Outlines the ecological basis of rapid speciation in the face of increased ecological opportunity, leading to adaptive radiations. Includes a detailed discussion on the mechanisms of ecological speciation and the basis of niche divergence among species, which is the fundamental unit of niche evolution. Williams, G. C. 1966. Adaptation and natural selection. Princeton, NJ: Princeton Univ. Press. A classic of post“modern synthesis” evolutionary theory. Describes the epistemological as well as the mechanistic basis of adaptation and natural selection in populations, particularly with respect to ecological aspects. Outlines the multilevel nature of adaptation, which is important when considering niche evolution. Textbooks http://www.oxfordbibliographies.com/view/document/obo9780199941728/obo97801999417280075.xml?rskey=WDTkgc&result=51&print 2/20 8/23/2016 Niche Evolution Evolutionary Biology Oxford Bibliographies As a specialized subject, niche evolution has not been the subject of full textbooks. However, the fundamental principles of niche evolution are found in diverse fields in biology, and a number of basic textbooks in ecology and evolution contain the building blocks for studying adaptive nicheevolution. Begon, et al. 2006 is a broadly introductory text on the science of ecology. Futuyma 2013 is similarly a broad, foundational text in evolutionary biology. Pianka 1999 introduced many of the historically important concepts in evolutionary ecology and the study of niche evolution. Mittelbach 2012 places niche evolution and other related processes in a community context. Briggs and Crowther 2001 introduces a paleontological perspective to evolutionary ecology, for longterm analyses of niche evolution. Begon, M., C. R. Townsend, and J. L. Harper. 2006. Ecology: From individuals to ecosystems. Malden, MA: Blackwell. A basic ecology textbook, which is a crucial starting point to understanding the ecological processes that affect individuals, populations, species, and communities. The biotic and abiotic factors that comprise ecosystems and affect existence and persistence therein are key to understanding niche evolution, as are the basic definitions of the ecological niche, both fundamental and realized. Briggs, D., and P. R. Crowther. 2001. Palaeobiology II. Malden, MA: Blackwell Science. Niche evolution is a difficult subject to place in a historical context, due to the lack of data on traits and ecological niches of extinct organisms. Nevertheless, a historical focus is an important aspect of broadscale studies of niche evolution, and a text such as this covers processes and empirical advances from a paleontological perspective. Futuyma, D. J. 2013. Evolution. 3d ed. Sunderland, MA: Sinauer. Just as a basic ecology textbook is needed to understand the ecological basis of the niche from an environmental and ecosystem perspective, so is an evolution textbook needed. Futuyma covers topics such as biogeography, speciation, and the origin of genetic variation that are all crucial for integrating niche evolution through time and space. Mittelbach, G. G. 2012. Community ecology. Sunderland, MA: Sinauer. Building on the more general principles found in broader ecology textbooks, Mittelbach explores community ecology, attempting