Valid and Invalid Nomenclature of Living and Fossil Deer, Cervidae
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Sexual Selection and Extinction in Deer Saloume Bazyan
Sexual selection and extinction in deer Saloume Bazyan Degree project in biology, Master of science (2 years), 2013 Examensarbete i biologi 30 hp till masterexamen, 2013 Biology Education Centre and Ecology and Genetics, Uppsala University Supervisor: Jacob Höglund External opponent: Masahito Tsuboi Content Abstract..............................................................................................................................................II Introduction..........................................................................................................................................1 Sexual selection........................................................................................................................1 − Male-male competition...................................................................................................2 − Female choice.................................................................................................................2 − Sexual conflict.................................................................................................................3 Secondary sexual trait and mating system. .............................................................................3 Intensity of sexual selection......................................................................................................5 Goal and scope.....................................................................................................................................6 Methods................................................................................................................................................8 -
Karyotype Relationships Among Selected Deer Species and Cattle Revealed by Bovine FISH Probes
RESEARCH ARTICLE Karyotype relationships among selected deer species and cattle revealed by bovine FISH probes Jan Frohlich1*, Svatava Kubickova1, Petra Musilova1, Halina Cernohorska1, Helena Muskova1, Roman Vodicka2, Jiri Rubes1 1 Central European Institute of Technology - Veterinary Research Institute, Brno, Czech Republic, 2 Zoo Prague, Prague, Czech Republic a1111111111 a1111111111 * [email protected] a1111111111 a1111111111 a1111111111 Abstract The Cervidae family comprises more than fifty species divided into three subfamilies: Capreolinae, Cervinae and Hydropotinae. A characteristic attribute for the species included in this family is the great karyotype diversity, with the chromosomal numbers ranging from OPEN ACCESS 2n = 6 observed in female Muntiacus muntjak vaginalis to 2n = 70 found in Mazama goua- Citation: Frohlich J, Kubickova S, Musilova P, Cernohorska H, Muskova H, Vodicka R, et al. zoubira as a result of numerous Robertsonian and tandem fusions. This work reports chro- (2017) Karyotype relationships among selected mosomal homologies between cattle (Bos taurus, 2n = 60) and nine cervid species using a deer species and cattle revealed by bovine FISH combination of whole chromosome and region-specific paints and BAC clones derived from probes. PLoS ONE 12(11): e0187559. https://doi. cattle. We show that despite the great diversity of karyotypes in the studied species, the org/10.1371/journal.pone.0187559 number of conserved chromosomal segments detected by 29 cattle whole chromosome Editor: Roscoe Stanyon, University of Florence, painting probes was 35 for all Cervidae samples. The detailed analysis of the X chromo- ITALY somes revealed two different morphological types within Cervidae. The first one, present in Received: August 23, 2017 the Capreolinae is a sub/metacentric X with the structure more similar to the bovine X. -
Deer from Late Miocene to Pleistocene of Western Palearctic: Matching Fossil Record and Molecular Phylogeny Data
Zitteliana B 32 (2014) 115 Deer from Late Miocene to Pleistocene of Western Palearctic: matching fossil record and molecular phylogeny data Roman Croitor Zitteliana B 32, 115 – 153 München, 31.12.2014 Institute of Cultural Heritage, Academy of Sciences of Moldova, Bd. Stefan Cel Mare 1, Md-2028, Chisinau, Moldova; Manuscript received 02.06.2014; revision E-mail: [email protected] accepted 11.11.2014 ISSN 1612 - 4138 Abstract This article proposes a brief overview of opinions on cervid systematics and phylogeny, as well as some unresolved taxonomical issues, morphology and systematics of the most important or little known mainland cervid genera and species from Late Miocene and Plio-Pleistocene of Western Eurasia and from Late Pleistocene and Holocene of North Africa. The Late Miocene genera Cervavitus and Pliocervus from Western Eurasia are included in the subfamily Capreolinae. A cervid close to Cervavitus could be a direct forerunner of the modern genus Alces. The matching of results of molecular phylogeny and data from cervid paleontological record revealed the paleozoogeographical context of origin of modern cervid subfamilies. Subfamilies Capreolinae and Cervinae are regarded as two Late Miocene adaptive radiations within the Palearctic zoogeographic province and Eastern part of Oriental province respectively. The modern clade of Eurasian Capreolinae is significantly depleted due to climate shifts that repeatedly changed climate-geographic conditions of Northern Eurasia. The clade of Cervinae that evolved in stable subtropical conditions gave several later radiations (including the latest one with Cervus, Rusa, Panolia, and Hyelaphus) and remains generally intact until present days. During Plio-Pleistocene, cervines repeatedly dispersed in Palearctic part of Eurasia, however many of those lineages have become extinct. -
A Comprehensive Approach Towards the Systematics of Cervidae
A peer-reviewed version of this preprint was published in PeerJ on 18 February 2020. View the peer-reviewed version (peerj.com/articles/8114), which is the preferred citable publication unless you specifically need to cite this preprint. Heckeberg NS. 2020. The systematics of the Cervidae: a total evidence approach. PeerJ 8:e8114 https://doi.org/10.7717/peerj.8114 A comprehensive approach towards the systematics of Cervidae Nicola S Heckeberg Corresp., 1, 2, 3 , Gert Wörheide 1, 2, 4 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, Munich, Germany 2 SNSB-Bayerische Staatssammlung für Paläontologie und Geologie, Munich, Germany 3 Leibniz Institute for Evolution and Biodiversity Science, Museum für Naturkunde, Berlin, Germany 4 Geobio-CenterLMU, Munich, Germany Corresponding Author: Nicola S Heckeberg Email address: [email protected] Systematic relationships of cervids have been controversial for decades. Despite new input from molecular systematics, consensus could only be partially reached. The initial, gross (sub)classification based on morphology and comparative anatomy was mostly supported by molecular data. The rich fossil record of cervids has never been extensively tested in phylogenetic frameworks concerning potential systematic relationships of fossil cervids to extant cervids. The aim of this work was to investigate the systematic relationships of extant and fossil cervids using molecular and morphological characters and make implications about their evolutionary history based on the phylogenetic reconstructions. To achieve these objectives, molecular data were compiled consisting of five nuclear markers and the complete mitochondrial genome of 50 extant and one fossil cervid species. Several analyses using different data partitions, taxon sampling, partitioning schemes, and optimality criteria were undertaken. -
Systematic Relationships of Five Newly Sequenced Cervid Species
Systematic relationships of five newly sequenced cervid species Nicola S. Heckeberg1,2,3, Dirk Erpenbeck1,4, Gert Wörheide1,2,4 and Gertrud E. Rössner1,2,4 1 Department for Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, Munich, Germany 2 SNSB-Bayerische Staatssammlung für Paläontologie und Geologie, Munich, Germany 3 Department of Zoology, University of Cambridge, Cambridge, United Kingdom 4 GeoBio-Center, Ludwig-Maximilians-Universität München, Munich, Germany ABSTRACT Cervid phylogenetics has been puzzling researchers for over 150 years. In recent decades, molecular systematics has provided new input for both the support and revision of the previous results from comparative anatomy but has led to only partial consensus. Despite all of the efforts to reach taxon-wide species sampling over the last two decades, a number of cervid species still lack molecular data because they are difficult to access in the wild. By extracting ancient DNA from museum specimens, in this study, we obtained partial mitochondrial cytochrome b gene sequences for Mazama bricenii, Mazama chunyi, Muntiacus atherodes, Pudu mephistophiles, and Rusa marianna, including three holotypes. These new sequences were used to enrich the existing mitochondrial DNA alignments and yielded the most taxonomically complete data set for cervids to date. Phylogenetic analyses provide new insights into the evolutionary history of these five species. However, systematic uncertainties within Muntiacus persist and resolving phylogenetic relationships within Pudu and Mazama remain challenging. Subjects Biodiversity, Computational Biology, Evolutionary Studies, Taxonomy, Zoology Submitted 12 September 2015 Keywords Cervidae, Phylogeny, Polyphyly, Cytochrome b, Pudu, Mazama, Muntiacus, Rusa Accepted 9 July 2016 Published 4 August 2016 Corresponding authors INTRODUCTION Nicola S. -
Satellite DNA in Neotropical Deer Species
G C A T T A C G G C A T genes Article Satellite DNA in Neotropical Deer Species Miluse Vozdova 1,* , Svatava Kubickova 1, Natália Martínková 2 , David Javier Galindo 3 , Agda Maria Bernegossi 3 , Halina Cernohorska 1, Dita Kadlcikova 1 , Petra Musilová 1 , Jose Mauricio Duarte 3 and Jiri Rubes 1 1 Department of Genetics and Reproductive Biotechnologies, Central European Institute of Technology—Veterinary Research Institute, Hudcova 70, 621 00 Brno, Czech Republic; [email protected] (S.K.); [email protected] (H.C.); [email protected] (D.K.); [email protected] (P.M.); [email protected] (J.R.) 2 Institute of Vertebrate Biology, Czech Academy of Sciences, Kvetna 8, 603 65 Brno, Czech Republic; [email protected] 3 Deer Research and Conservation Center (NUPECCE), School of Agricultural and Veterinarian Sciences, São Paulo State University (Unesp), 14884-900 Jaboticabal, Brazil; [email protected] (D.J.G.); [email protected] (A.M.B.); [email protected] (J.M.D.) * Correspondence: [email protected]; Tel.: +4205-3333-1422 Abstract: The taxonomy and phylogenetics of Neotropical deer have been mostly based on morpho- logical criteria and needs a critical revision on the basis of new molecular and cytogenetic markers. In this study, we used the variation in the sequence, copy number, and chromosome localization of satellite I-IV DNA to evaluate evolutionary relationships among eight Neotropical deer species. Using FISH with satI-IV probes derived from Mazama gouazoubira, we proved the presence of satellite DNA blocks in peri/centromeric regions of all analyzed deer. Satellite DNA was also detected in the interstitial chromosome regions of species of the genus Mazama with highly reduced chromosome numbers. -
Native Ungulates (Astrapotheria, Litopterna, and Notoungulata)
AMEGHINIANA - 2013 - Tomo 50 (2): 193 – 216 ISSN 0002-7014 SKULL GEOMETRIC MORPHOMETRICS AND PALEOECOLOGY OF SANTACRUCIAN (LATE EARLY MIOCENE; PATAGONIA) NATIVE UNGULATES (ASTRAPOTHERIA, LITOPTERNA, AND NOTOUNGULATA) GUILLERMO H. CASSINI1,2 1División Mastozoología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” Av. Ángel Gallardo 470, C1405DJR, Ciudad Autónoma de Buenos Aires, Argentina. CONICET. 2Departamento de Ciencias Básicas, Universidad Nacional de Luján, Buenos Aires, Argentina [email protected] Abstract. Three orders of South American extinct native ungulates are recorded from the Santa Cruz Formation along the Atlantic coast of Patagonia: Notoungulata (Adinotherium Ameghino, Nesodon Owen, Interatherium Ameghino, Protypotherium Ameghino, Hegetotherium Ameghino, and Pachyrukhos Ameghino), Litopterna (Theosodon Ameghino, Anisolophus Burmeister, Tetramerorhinus Ameghino, Diadiapho- rus Ameghino, and Thoatherium Ameghino), and Astrapotheria (Astrapotherium Burmeister). An ecomorphological study based on geometric morphometrics of the masticatory apparatus was performed. The reference sample included 618 extant specimens of the orders Artiodactyla, Perissodactyla, Hyracoidea, and Diprotodontia. Thirty six cranial and 27 mandibular three-dimensional landmarks were digitized. Allomet- ric scaling, principal component analyses, and phylogenetic generalized estimating equations on the cranium and mandible were preformed. Analyses of cranial shape show strong phylogenetic constraints, whereas the mandibular analyses show -
Description of a New Deer Species
Description of a new deer species (Cervidae, Mammalia) from the Early Pliocene of Eastern Europe, with a review of early dispersals and palaeobiogeography of the subfamily Cervinae Roman Croitor To cite this version: Roman Croitor. Description of a new deer species (Cervidae, Mammalia) from the Early Pliocene of Eastern Europe, with a review of early dispersals and palaeobiogeography of the subfamily Cervinae. Neues Jahrbuch für Geologie und Paläontologie - Abhandlungen, E Schweizerbart Science Publishers, 2017, 283 (1), pp.85 - 108. 10.1127/njgpa/2017/0630. hal-01737204 HAL Id: hal-01737204 https://hal.archives-ouvertes.fr/hal-01737204 Submitted on 14 Apr 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Neues Jahrbuch für Geologie und Paläontologie - Abhandlungen, 283/1, 85-108 - Stuttgart, January 2017 Description of a new deer species (Cervidae, Mammalia) from the Early Pliocene of Eastern Europe, with a review of early dispersals and palaeobiogeography of the subfamily Cervinae Roman Croitor With 12 figures and 2 tables Abstract: A new deer species, Praeelaphus australorientalis sp. nov., is described from the Kuchurgan beds dated back to the Lower Pliocene (European Lang Mammal Zones MN14 – beginning of MN15). -
Karyotype and Idiogram of the Axis Deer (Axia Axis, Cervidae) by Conventional Staining, GTG-, High-Resolution GTG-, and Ag-NOR-Banding Techniques
© 2017 The Japan Mendel Society Cytologia 82(1) Special Issue: 91–98 Karyotype and Idiogram of the Axis Deer (Axia axis, Cervidae) by Conventional Staining, GTG-, High-Resolution GTG-, and Ag-NOR-Banding Techniques Hathaipat Khongcharoensuk1, Alongklod Tanomtong1*, Isara Patawang2, Praween Supanuam3, Somnuek Sornnok4 and Krit Pinthong5 1 Toxic Substances in Livestock and Aquatic Animals Research Group, Department of Biology, Faculty of Science, Khon Kaen University, Muang, Khon Kaen 40002, Thailand 2 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 3 Program in Biology, Faculty of Science, Ubon Ratchathani Rajabhat University, Ubon Ratchathani 34000, Thailand 4 Agricultural Technology Division, Department Technology and Industries, Faculty of Science and Technology, Prince of Songkla University (Pattani Campus), Muang, Pattani 94000, Thailand 5 Program in Biology, Department of Fundamental Science, Faculty of Science and Technology, Surindra Rajabhat University, Surin 32000, Thailand Received December 22, 2014; accepted April 8, 2015 Summary The standardized karyotype and idiogram of the axis deer (Axis axis, Cervidae) at Khon Kaen Zoo, Thailand were established. Blood samples were taken from two male and two female axis deer. After standard whole blood T-lymphocytes were cultured at 37°C for 72 h in the presence of colchicine, metaphase spreads were performed on microscopic slides and air-dried. Conventional staining, GTG-, Ag-NOR-banding and high-resolu- tion techniques were applied to stain the chromosome. The results showed that the diploid chromosome number of A. axis was 2n=66 and the fundamental number (NF) was 70 in both male and female. The types of autosomes observed were 2 large metacentric, 2 large submetacentric, 2 large telocentric, 6 medium telocentric and 52 small telocentric chromosomes. -
RODRIGO ANTONIO MARTINS DE SOUZA.Pdf
UNIVERSIDADE FEDERAL DO PARANÁ RODRIGO ANTONIO MARTINS DE SOUZA DETERMINAÇÃO DA IDADE E BIOLOGIA REPRODUTIVA DE MAZAMA RAFINESQUE, 1817 (ARTIODACTYLA, CERVIDAE) CURITIBA 2019 RODRIGO ANTONIO MARTINS DE SOUZA DETERMINAÇÃO DA IDADE E BIOLOGIA REPRODUTIVA DE MAZAMA RAFINESQUE, 1817 (ARTIODACTYLA, CERVIDAE) Tese apresentada ao curso de Pós-Graduação em Zoologia, Setor de Ciências Biológicas, Universidade Federal do Paraná, como requisito parcial à obtenção do título de Doutor em Zoologia. Orientador: Prof. Dr. Emygdio Leite de Araujo Monteiro-Filho CURITIBA 2019 Para Ivanete e Antonio. AGRADECIMENTOS Em uma tarde tranquila no Setor de Ciências Biológicas da UFPR eu aguardava no corredor do terceiro piso da Zoologia. Era o ano que antecedia o meu ingresso no Programa de Pós-Graduação em Zoologia e meu futuro orientador, professor Emygdio estava como sempre ajudando estudantes da Biologia, da zôo ou da eco com seus trabalhos. Eu, com minha câmera a tiracolo, comecei a observar o padrão de luz e formas das claraboias do teto do prédio. Em poucos minutos estava fotografando o que via e estudando os enquadramentos e composições, quando uma gentil professora me indagou quanto ao que eu fotografava. Lhe expliquei mostrando as imagens no visor da câmera. Se tratava da pioneira professora Danúncia Urban, que com seu cordial sorriso, me disse que aquilo era “bem” biólogo da minha parte. Ao fazer minha expressão de confusão, ela me explicou: a vida de um(a) biólogo(a) é procurar padrões na natureza, como o que eu havia acabado de fazer. Lhe contei que iniciaria meu doutorado com o professor Emygdio em breve e ela me desejou sucesso, tocou meu ombro e entrou na sua sala para continuar seu trabalho. -
An 11 000-Year-Old Giant Muntjac Subfossil from Northern Vietnam: Implications for Past and Present Populations
An 11 000-year-old giant muntjac subfossil from Northern Vietnam: implications for past and present populations Stimpson, C. M., Utting, B., O'Donnell, S., Huong, N. T. M., Kahlert, T., Manh, B. V., Khanh, P. S., & Rabett, R. J. (2019). An 11 000-year-old giant muntjac subfossil from Northern Vietnam: implications for past and present populations. Royal Society Open Science, 6(3), [181461]. https://doi.org/10.1098/rsos.181461 Published in: Royal Society Open Science Document Version: Publisher's PDF, also known as Version of record Queen's University Belfast - Research Portal: Link to publication record in Queen's University Belfast Research Portal Publisher rights Copyright 2019 the authors. This is an open access article published under a Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. General rights Copyright for the publications made accessible via the Queen's University Belfast Research Portal is retained by the author(s) and / or other copyright owners and it is a condition of accessing these publications that users recognise and abide by the legal requirements associated with these rights. Take down policy The Research Portal is Queen's institutional repository that provides access to Queen's research output. Every effort has been made to ensure that content in the Research Portal does not infringe any person's rights, or applicable UK laws. If you discover content in the Research Portal that you believe breaches copyright or violates any law, please contact [email protected]. -
Bony Labyrinth Morphology Clarifies the Origin and Evolution of Deer
www.nature.com/scientificreports OPEN Bony labyrinth morphology clarifes the origin and evolution of deer Bastien Mennecart 1, Daniel DeMiguel2,3,4, Faysal Bibi5, Gertrud E. Rössner6, Grégoire Métais7, James M. Neenan8, Shiqi Wang9, Georg Schulz10, Bert Müller 10 & Loïc Costeur1 Received: 5 May 2017 Deer are an iconic group of large mammals that originated in the Early Miocene of Eurasia (ca. 19 Ma). Accepted: 14 September 2017 While there is some consensus on key relationships among their members, on the basis of molecular- or Published: xx xx xxxx morphology-based analyses, or combined approaches, many questions remain, and the bony labyrinth has shown considerable potential for the phylogenetics of this and other groups. Here we examine its shape in 29 species of living and fossil deer using 3D geometric morphometrics and cladistics. We clarify several issues of the origin and evolution of cervids. Our results give new age estimates at diferent nodes of the tree and provide for the frst time a clear distinction of stem and crown Cervidae. We unambiguously attribute the fossil Euprox furcatus (13.8 Ma) to crown Cervidae, pushing back the origin of crown deer to (at least) 4 Ma. Furthermore, we show that Capreolinae are more variable in bony labyrinth shape than Cervinae and confrm for the frst time the monophyly of the Old World Capreolinae (including the Chinese water deer Hydropotes) based on morphological characters only. Finally, we provide evidence to support the sister group relationship of Megaloceros giganteus with the fallow deer Dama. Deer (Cervidae) are a family of antlered ruminants and, with 55 extant species, are one of the most diverse groups of artiodactyls.