Citation Patterns of Advanced Undergraduate Students in Biology, 2000-2002
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The Serials Crisis and Open Access: a White Paper for the Virginia Tech Commission on Research
The Serials Crisis and Open Access A White Paper for the Virginia Tech Commission on Research Philip Young University Libraries Virginia Tech December 2, 2009 This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 3.0 United States License. 1 Introduction This white paper offers an introduction to open access as well as a look at its current development. The open access movement is an attempt to free scholarly communication from restrictions on access, control, and cost, and to enable benefits such as data mining and increased citations. Open access has gained significant momentum through mandates from research funders and universities. While open access can be provided in parallel with traditional publishing, it is increasingly available as a publishing option. While open access is approached here from the problem of subscription inflation, it is important to recognize that open access is not merely a library issue, but affects the availability of research to current and future students and scholars. The Serials Crisis The phrase “serials crisis” has been in use for more than a decade as shorthand for the rise in costs for academic journals and the inability of libraries to bring these costs under control. Price inflation for academic journals significantly exceeds the consumer price index (see graph, next page). The most recent data show that journal prices increased at an average rate of 8% in 2007.1 Because journal subscriptions are a large part of the collections budget at academic libraries, any reduction in funding usually results in a loss of some journals. And the high rate of annual inflation means that academic library budgets must increase every year simply to keep the same resources that students and faculty need. -
The European Molecular Biology Organization (EMBO) and Nature
The European Molecular Biology Organization (EMBO) and Nature Publishing Group (NPG) are pleased to announce that The EMBO Journal and EMBO reports will accept open-access articles as of January 2007, subject to payment of a publication fee. The journals are moving to a mixed-revenue model of subscription charges and publication fees. The open-access option will be available to all authors submitting original research on or after 1 January 2007. The publication fee will be €2,000 plus VAT (where applicable). Articles published with a publication fee will be clearly identified in the online and print editions of the journal with an open-access icon. Print subscription prices will not be affected and site license prices will be adjusted in line with the amount of subscription content published annually. The journal editors will be blind to the author's choice, avoiding any possibility of a conflict of interest during peer review and acceptance. Authors paying the publication fee will be entitled to self-archive the published version immediately on publication in a repository of their choice, and in any format. Content that an author has decided to make freely available online will be licensed under the Creative Commons Deed 2.5 (http://creativecommons.org/licenses/by-nc-nd/2.5/). The author thereby permits dissemination and re-use of the article, enabling the sharing and re-use of scientific material. This does not however permit commercial exploitation or the creation of derivative works without specific permission. Other articles will continue to be published under NPG’s exclusive License-to-Publish, where its usual self-archiving policy will apply. -
Chromatin and Epigenetics Cross-Journal Focus Chromatin and Epigenetics
EMBO Molecular Medicine cross-journal focus Chromatin and epigenetics cross-journal focus Chromatin and epigenetics EDITORS Esther Schnapp Senior Editor [email protected] | T +49 6221 8891 502 Esther joined EMBO reports in October 2008. She was awarded her PhD in 2005 at the Max Planck Institute for Molecular Cell Biology and Genetics in Dresden, Germany, where she studied tail regeneration in the axolotl. As a post-doc she worked on muscle development in zebrafish and on the characterisation of mesoangioblasts at the Stem Cell Research Institute of the San Raffaele Hospital in Milan, Italy. Anne Nielsen Editor [email protected] | T +49 6221 8891 408 Anne received her PhD from Aarhus University in 2008 for work on miRNA processing in Joergen Kjems’ lab. As a postdoc she then went on to join Javier Martinez’ lab at IMBA in Vienna and focused on siRNA-binding proteins and non-conventional splicing in the unfolded protein response. Anne joined The EMBO Journal in 2012. Maria Polychronidou Editor [email protected] | T +49 6221 8891 410 Maria received her PhD from the University of Heidelberg, where she studied the role of nuclear membrane proteins in development and aging. During her post-doctoral work, she focused on the analysis of tissue-specific regulatory functions of Hox transcription factors using a combination of computational and genome-wide methods. Céline Carret Editor [email protected] | T +49 6221 8891 310 Céline Carret completed her PhD at the University of Montpellier, France, characterising host immunodominant antigens to fight babesiosis, a parasitic disease caused by a unicellular EMBO Apicomplexan parasite closely related to the malaria agent Plasmodium. -
Working Together to Maximize Efficiency During the COVID-19 Pandemic
Working together to maximize efficiency during the COVID-19 pandemic A cross-publisher initiative #C19RapidReview Last updated: May 2020 This cross-publisher collaboration endorsed by the Open Access Scholarly Publishers Association (OASPA) aims to ensure research related to COVID-19 is reviewed and published as quickly as possible. We have come together across the open publishing industry to support academics; peer reviewers, editors and authors, and to ensure the widest and quickest dissemination of relevant quality content. To this end, we encourage academics to sign up to a reviewer database. Please, consider signing up as a rapid reviewer by filling in this form. We also encourage authors to use preprint servers and call on other publishers to action with a focus on open data. Read the formal Letter of Intent for more information and help us spread the word on social media using #C19RapidReview. List of organizations and journal titles participating in the #C19RapidReview initiative Royal Society Proceedings A Proceedings B Open Biology Biology Letters Interface Royal Society Open Science Hindawi Advances in Public Health Analytical Cellular Pathology BioMed Research International Canadian Journal of Infectious Diseases and Medical Microbiology Canadian Respiratory Journal Cardiology Research and Practice Case Reports in Critical Care Case Reports in Emergency Medicine Case Reports in Immunology Case Reports in Infectious Diseases Case Reports in Medicine Case Reports in Otolaryngology Case Reports in Pulmonology Complexity -
EMBO Facts & Figures
excellence in life sciences young investigators|courses,workshops,conference series & symposia|installation grantees|long-term fellows|short-term fellows|policy, science & society|the EMBO Journal|EMBO reports|molecular systems biology|EMBO molecular medicine|global exchange|gold medal|the EMBO meeting|women in science| EMBO reports|molecular systems biology|EMBO molecular medicine|global exchange|gold medal|the EMBO meeting|women in science|young investigators|courses,workshops,conference series & symposia|installation grantees|long-term fellows|short-term fellows|policy, science & society|the EMBO Journal| global exchange|gold medal|the EMBO meeting|women in science|young investigators|long-term fellows|short-term fellows|policy, science & society|the EMBO Journal|courses,workshops,conference series & symposia|EMBO reports|molecular systems biology|EMBO molecular medicine|installation grantees| EMBO molecular medicine|installation grantees|long-term fellows|gold medal|molecular systems biology|short-term fellows|the EMBO meeting|womenReykjavik in science|young investigators|courses,workshops,conference series & symposia|global exchange|EMBO reports|policy, science & society|the EMBO Journal| gold medal|the EMBO meeting|women in science|young investigators|courses,workshops,conference series & symposia|global exchange|policy, science & society|the EMBO Journal|EMBO reports|molecular systems biology|EMBO molecular medicine|installation grantees|long-term fellows|short-term fellows| courses,workshops,conference series & symposia|global -
Out of Europe, for Europe: Creating a Global Scientific Network
WINTER 2010|2011 encounters Newsletter of the European Molecular Biology Organization Out of Europe, for Europe: creating a global scientifi c network by MARIA LEPTIN ◗ From the beginning, all EMBO pro- inhabitants compared to North America’s 343 million) emerges as our grammes and activities were intended to strongest partner. catalyse cross-border exchange of ideas and The numbers clearly illustrate room for improvement in our inter- knowledge. As a European organization actions with the other continents. The large numbers in the green EMBO funds activities to support the molecu- and pale orange circles indicate that in some programmes we have lar life sciences in Europe. But it has always good contacts with South America, Africa and Asia. However, In the been recognized that ‘good for Europe’ does case of the EMBO Short-Term Fellowships, the participating scientists not mean ‘restricted to Europe’. Thus the eli- often come to Europe from countries with a strong need for training in gibility criteria for EMBO Fellowships, which new methods and technologies. The high numbers in the green circles stipulate that the applicant move to another country, allow scientists include many EMBO-funded plenary speakers at meetings. These from the EMBO Member States to take their fellowships abroad, and activities are benefi cial even if they do not represent a sustained coop- young scientists from any country in the world to apply for fellow- eration with the partner countries. They are one way in which EMBO ships to work in one of the member states. The courses, workshops can begin to establish more intensive relations, and they may serve to and meetings we fund accept participants without any national re- open up paths for high-level, broad co-operations. -
A Simple Proposal for the Publication of Journal Citation Distributions
bioRxiv preprint doi: https://doi.org/10.1101/062109; this version posted September 11, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Larivière et al. (2016) – Publication of Journal Citation Distributions A simple proposal for the publication of journal citation distributions Vincent Larivière1, Véronique Kiermer2, Catriona J. MacCallum3, Marcia McNutt4†, Mark Patterson5, Bernd Pulverer6, Sowmya Swaminathan7, Stuart Taylor8, Stephen Curry9* 1Associate Professor of Information Science, École de bibliothéconomie et des sciences de l’information, Université de Montréal, C.P. 6128, Succ. Centre-Ville, Montréal, QC. H3C 3J7, Canada; Observatoire des Sciences et des Technologies (OST), Centre Interuniversitaire de Recherche sur la Science et la Technologie (CIRST), Université du Québec à Montréal, CP 8888, Succ. Centre-Ville, Montréal, QC. H3C 3P8, Canada 2Executive Editor, PLOS, 1160 Battery Street, San Francisco, CA 94111, USA 3Advocacy Director, PLOS, Carlyle House, Carlyle Road, Cambridge CB4 3DN, UK 4Editor-in-Chief, Science journals, American Association for the Advancement of Science, 1200 New York Avenue, NW, Washington, DC 20005, USA 5Executive Director, eLife, 24 Hills Road, Cambridge CB2 1JP, UK 6Chief Editor, The EMBO Journal, Meyerhofstrasse 1,69117 Heidelberg, Germany 7Head of Editorial Policy, Nature Research, Springer Nature, 225 Bush Street, Suite 1850, San Francisco 94104, USA 8Publishing Director, The Royal Society, 6-9 Carlton House Terrace, London SW1Y 5AG, UK 9Professor of Structural Biology, Department of Life Sciences, Imperial College, Exhibition Road, London, SW7 2AZ, UK †Present address: National Academy of Sciences, 2101 Constitution Avenue NW, Washington, DC 20418, USA *Corresponding Author. -
A Stochastic Hybrid Model for DNA Replication Incorporating Protein Mobility Dynamics
bioRxiv preprint doi: https://doi.org/10.1101/583187; this version posted March 20, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. A stochastic hybrid model for DNA replication incorporating protein mobility dynamics Jonas Windhager1,2,4*, Amelia Paine1*, Patroula Nathanailidou3, Eve Tasiudi2, Mar´ıaRodr´ıguezMart´ınez1, Zoi Lygerou3, John Lygeros2, and Maria Anna Rapsomaniki1y 1IBM Research Zurich, R¨uschlikon, Switzerland 2Dept. of Information Technology and Electrical Engineering, ETH Zurich, Zurich, Switzerland 3Dept. of Biology, School of Medicine, University of Patras, Rio, Patras, Greece 4Current address: Dept. of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland *These authors contributed equally to this work yCorrespondence address: [email protected] February 23, 2019 1 bioRxiv preprint doi: https://doi.org/10.1101/583187; this version posted March 20, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. ABSTRACT DNA replication is a complex process that ensures the maintenance of genetic infor- mation. Recently, advancements in chromatin conformation capture techniques have enabled the modeling of DNA replication as a spatio-temporal process. Here, we present a stochastic hybrid model for DNA replication that incorporates protein mobility dy- namics and 3D chromatin structure. Performing simulations for three model variations and a broad range of parameter values, we collected about 300,000 in silico replication profiles for fission yeast and conducted a parameter sensitivity analysis. We find that the number of firing factors initiating replication is rate-limiting and dominates the time un- til completion of DNA replication. -
Media Kit 2018 Why Use EMBO Press Publications for Your Marketing Message?
Progressive, Transparent, Fair Publishing Media Kit 2018 Why use EMBO Press Publications for your Marketing Message? All four EMBO journals are published as EMBO Press, which promotes EMBO’s policies, values and technologies. Trademark concepts for EMBO Press include ‘Transparent Process’ and ‘Source Data’. The four EMBO journals are published by Wiley, with content hosted on Highwire and Wiley Online Library. The EMBO Journal is THE prime molecular biology journal in the world (Impact Factor 2016: 9,792) and thus holds a leading position in electronic E-mail Service usage. It is published two times a months and new articles appear each day. The EMBO Journal provides its readers with an exclusive preview on The most important and innovative research from all areas of molecular and forthcoming journal content through the Content Alerting Service cell biology is presented in review articles. A particular emphasis is placed on (eTOC alert). This covers the complete table of content which is molecular mechanism and physiological relevance. automatically e-mailed as soon as a new online issue is published. The EMBO Journal is indispensable reading for all biologists working in Placing a full banner within the eTOC alerts allows you to reach research and development, both in industry and in academia. All classic a large and committed audience of regular readers of the journal. segments of molecular and cell biology are being presented. Full Banner Price CPM 468 x 60 pixel £ € $ The EMBO Journal 48 56 60 The EMBO Journal – emboj.embopress.org FOCUS: For over 30 years, The EMBO Journal has published papers describing original research of broad general interest in molecular and cell biology – a particular emphasis is placed on molecular mechanism and physiological relevance. -
STM US 2019 Day 2 Innovations Innovating Peer Review King
Cross publisher manuscript and peer review transfer Life Science Alliance – RUP, EMBO Press & CSHL Press Journal of Cell Biology (RUP), Journal of Cell Science (Company of Biologists), Molecular Biology of the Cell (American Society of Cell Biology) Transfers to RUP journals Life Science Alliance Cross publisher collaboration in action • A new “gold OA” online only journal publishing across the life and biomedical sciences launched in 2018 • Jointly owned by EMBO, RU & CSH • Jointly managed by EMBO Press, RUP & CSH Press – through a stand alone LLC • Welcomes direct submissions and author-initiated transfers from 9 journals published by Life Science Alliance partners The EMBO Journal, EMBO reports, EMBO Molecular Medicine, Molecular Systems Biology Journal of Cell Biology, Journal of Experimental Medicine, Journal of General Physiology Genes & Development, Genome Research Life Science Alliance Powered by Editors & Technology • Leverages talented staff professional scientific editors at RUP, EMBO, CSH & LSA • Builds off MECA technology to link eJP and BenchPress peer-review environments • Editors consult on suitability of manuscripts for LSA • Only for authors who have opted for possible consultation • ~70% authors submitting to JCB/JEM opt for consultation with LSA • Authors receive firm editorial commitments from LSA • to send editorially rejected manuscripts to peer review • to publish manuscripts that have already Rebecca Alvania, PhD Teo Pulvirenti, PhD Andrea Leibfried, PhD undergone peer review at partner journals with Executive Editor, JCB Executive Editor, JEM Executive Editor, LSA revisions. (max. one round of experimental revision) Life Science Alliance • Commitment to peer review • ~300 m/s declined by JCB • ~375 m/s declined by JEM Indexed in PubMed, Scopus, & • Commitment to publish Web of Science (Emerging Sources Citation Index, Core Collection). -
Accept Or Reject? How EMBO Decides What to Publish
ISSUE 6 SUMMER 2006 promoting excellence in the molecular life sciences in europe message from embo executive director Accept or reject? How EMBO decides what to publish All scientists have an inter- tise in all areas of the molecular life sciences. highlights in this issue est in what happens to their Based on their guidance, a fi nal decision is papers after submitting made and the paper either moves to the next Estonia joins EMBC 2 them to a journal. How do phase or is rejected. they come to be accepted or All papers that continue in the system rejected? Many discussions undergo peer review by three external experts. point to the fact that scientists are unaware of Using their reports, the editors re-examine the intricacies of this process. the paper and decide whether it should be Every journal is different, but The EMBO accepted. During this process, The EMBO Journal, EMBO reports and Molecular Systems Journal editors consult with the Executive Biology have developed a system that is fast, Editor, Pernille Rørth. As Senior Editor of reliable and based solely on scientifi c merit. EMBO reports, I review all submissions. And Irrespective of the area, papers from all sec- for Molecular Systems Biology, a team of fi ve EMBO Installation Grants: tions of the life sciences being treated equally. Senior Editors, all leaders in the fi eld, play a First application round 2 EMBO deals with a huge quantity of sub- crucial role in the decision-making process. missions every year – over 3,000 for The EMBO This interplay between active scientists Spotlight on EMBO Journal and more than 600 for EMBO reports. -
EMBO Recognizes 63 Researchers for Advances in Life Sciences
European Molecular Biology Organization PRESS RELEASE EMBO recognizes 63 researchers for advances in life sciences HEIDELBERG, GERMANY, this yearʼs election work in countries By their involvement with the 27 OCTOBER 2010 – The European across Europe and become EMBO organizationʼs activities, the selected Molecular Biology Organization Members. Fourteen of those elected researchers will help shape the (EMBO) today announced the work in the United States, Japan and direction of the life sciences in recognition of outstanding research Taiwan and are honoured as EMBO Europe. More than half of the EMBO contributions by 63 life scientists Associate Members. International Members contribute by serving on from 14 countries. The researchers mobility has been key for many of advisory editorial boards of the are awarded the life-long honour of the new members and associate organizationʼs four scientific journals, EMBO membership, joining almost members as they progressed in their mentoring young researchers, 1500 of the worldʼs leading scientific careers, fostering providing expertise to EMBO molecular biologists. innovative and collaborative research programmes and taking the lead on “EMBO Members are the basis globally. new initiatives. Members also for the organizationʼs international The 63 scientists represent a nominate candidates for the annual reputation and our most valuable broad cross-section of research EMBO Gold Medal award. asset,” said Maria Leptin, EMBO covering classical areas of molecular A list of the newly elected EMBO Director. “We welcome this yearʼs biology as well as rapidly developing Members and Associate Members group of exceptional scientists and fields such as systems biology, accompanies this announcement. look forward to their fresh input and neuroscience and cancer biology.