Coral Reef Regeneration - Jean M
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Mechanisms of Urodele Limb Regeneration
Received: 1 September 2017 Accepted: 4 October 2017 DOI: 10.1002/reg2.92 REVIEW Mechanisms of urodele limb regeneration David L. Stocum Department of Biology, Indiana University−Purdue University Indianapolis, Abstract 723 W. Michigan St, Indianapolis, IN 46202, USA This review explores the historical and current state of our knowledge about urodele limb regen- Correspondence eration. Topics discussed are (1) blastema formation by the proteolytic histolysis of limb tissues David L. Stocum, Department of Biology, Indiana to release resident stem cells and mononucleate cells that undergo dedifferentiation, cell cycle University−Purdue University Indianapolis, 723 W. Michigan St, Indianapolis, IN 46202, USA. entry and accumulation under the apical epidermal cap. (2) The origin, phenotypic memory, and Email: [email protected] positional memory of blastema cells. (3) The role played by macrophages in the early events of regeneration. (4) The role of neural and AEC factors and interaction between blastema cells in mitosis and distalization. (5) Models of pattern formation based on the results of axial reversal experiments, experiments on the regeneration of half and double half limbs, and experiments using retinoic acid to alter positional identity of blastema cells. (6) Possible mechanisms of distalization during normal and intercalary regeneration. (7) Is pattern formation is a self-organizing property of the blastema or dictated by chemical signals from adjacent tissues? (8) What is the future for regenerating a human limb? KEYWORDS limb, mechanisms, regeneration, review, urodele 1 INTRODUCTION encouraged the idea that mammals have retained a latent ances- tral genetic circuitry for appendage regeneration that might be Evidence from the fossil record indicates that urodeles (salaman- activated by appropriate interventions and applied to the goal of ders and newts) of the Permian period (the last period of the Pale- regenerating a human limb. -
A Statistical Study of Regeneration in Two Species of Crustacea by W
349 A STATISTICAL STUDY OF REGENERATION IN TWO SPECIES OF CRUSTACEA BY W. E. AGAR, Professor of Zoology, University of Melbourne. (Received 22nd April, 1930.) (With Three Text-figures.) CONTENTS. PAGE I. Introduction 349 II. Methods of culture 350 III. Growth and sex 351 IV. The material available . .351 V. Structure of the antenna 352 VI. The operation . • . 353 VII. General nature of the regeneration 353 VIII. Measuring and recording the amount of regeneration .... 355 IX. The influence of certain factors on regeneration ..... 357 (a) The segment through which amputation is performed . -357 (6) The level of amputation within the segment .... 357 W Age 358 (d) The simultaneous regeneration of the other antenna . 358 (e) The previous regeneration of the other antenna . -359 (/) Food 360 (g) General internal conditions of the animal 360 (h) General external conditions 361 X. The nature of the intrinsic factors controlling regeneration as disclosed by statistical analysis 362 XI. Discussion of results .......... 365 XII. Summary 367 I. INTRODUCTION. THIS study of regeneration in the two Cladoceran species, Simocephalus gibbosus and Daphnia carinata, grew out of a Lamarckian experiment on the possibility of improving (or otherwise altering) the power of regeneration in these animals by making them regenerate the antenna in many successive generations. Up to the present, these experiments have been completely negative in this respect, though they have furnished much data concerning the process of regeneration. The power of regeneration in a line of Simocephalus in which the antenna has been amputated a^»egenerated for seventy-four successive generations, and in a line of Daphnia for eighty generations, shows no difference from the power of regeneration of the JEB'VIliv 23 35° W. -
The Molecular Basis of Amphibian Limb Regeneration: Integrating the Old with the New David M
seminars in CELL & DEVELOPMENTAL BIOLOGY, Vol. 13, 2002: pp. 345–352 doi:10.1016/S1084–9521(02)00090-3, available online at http://www.idealibrary.com on The molecular basis of amphibian limb regeneration: integrating the old with the new David M. Gardiner∗, Tetsuya Endo and Susan V. Bryant Is regeneration close to revealing its secrets? Rapid advances classical studies to guide the identification of the in technology and genomic information, coupled with several functions of this large set of genes. useful models to dissect regeneration, suggest that we soon The challenge of understanding the mechanisms may be in a position to encourage regeneration and enhanced controlling the biology of complex systems is hardly repair processes in humans. unique to regeneration biology. In recent years, techniques have become available to identify all the Key words: limb / regeneration / pattern formation / molecular components of a system, and to study the urodele / fibroblast / dedifferentiation / stem cells interactions between those components. Key to the success of such an approach is the ability to identify © 2002 Elsevier Science Ltd. All rights reserved. the molecules, while at the same time having an un- derstanding of the cell and tissue level properties of the system. The goal of this reviewis to discuss key insights from the classical literature as well as more recent molecular findings. We focus on three criti- Introduction cally important cell types: fibroblasts, epidermis and nerves. Each of these is necessary, and together they The study of amphibian limb regeneration has a rich are sufficient for the regeneration of a limb. Although experimental history. -
Coral Reef Algae
Coral Reef Algae Peggy Fong and Valerie J. Paul Abstract Benthic macroalgae, or “seaweeds,” are key mem- 1 Importance of Coral Reef Algae bers of coral reef communities that provide vital ecological functions such as stabilization of reef structure, production Coral reefs are one of the most diverse and productive eco- of tropical sands, nutrient retention and recycling, primary systems on the planet, forming heterogeneous habitats that production, and trophic support. Macroalgae of an astonish- serve as important sources of primary production within ing range of diversity, abundance, and morphological form provide these equally diverse ecological functions. Marine tropical marine environments (Odum and Odum 1955; macroalgae are a functional rather than phylogenetic group Connell 1978). Coral reefs are located along the coastlines of comprised of members from two Kingdoms and at least over 100 countries and provide a variety of ecosystem goods four major Phyla. Structurally, coral reef macroalgae range and services. Reefs serve as a major food source for many from simple chains of prokaryotic cells to upright vine-like developing nations, provide barriers to high wave action that rockweeds with complex internal structures analogous to buffer coastlines and beaches from erosion, and supply an vascular plants. There is abundant evidence that the his- important revenue base for local economies through fishing torical state of coral reef algal communities was dominance and recreational activities (Odgen 1997). by encrusting and turf-forming macroalgae, yet over the Benthic algae are key members of coral reef communities last few decades upright and more fleshy macroalgae have (Fig. 1) that provide vital ecological functions such as stabili- proliferated across all areas and zones of reefs with increas- zation of reef structure, production of tropical sands, nutrient ing frequency and abundance. -
The Physical Environment in Coral Reefs of the Tayrona National Natural Park (Colombian Caribbean) in Response to Seasonal Upwelling*
Bol. Invest. Mar. Cost. 43 (1) 137-157 ISSN 0122-9761 Santa Marta, Colombia, 2014 THE PHYSICAL ENVIRONMENT IN CORAL REEFS OF THE TAYRONA NATIONAL NATURAL PARK (COLOMBIAN CARIBBEAN) IN RESPONSE TO SEASONAL UPWELLING* Elisa Bayraktarov1, 2, Martha L. Bastidas-Salamanca3 and Christian Wild1,4 1 Leibniz Center for Tropical Marine Ecology (ZMT), Coral Reef Ecology Group (CORE), Fahrenheitstraße 6, D-28359 Bremen, Germany. [email protected], [email protected] 2 Present address: The University of Queensland, Global Change Institute, Brisbane QLD 4072, Australia 3 Instituto de Investigaciones Marinas y Costeras (Invemar), Calle 25 No. 2-55 Playa Salguero, Santa Marta, Colombia. [email protected] 4 University of Bremen, Faculty of Biology and Chemistry (FB2), D-28359 Bremen, Germany ABSTRACT Coral reefs are subjected to physical changes in their surroundings including wind velocity, water temperature, and water currents that can affect ecological processes on different spatial and temporal scales. However, the dynamics of these physical variables in coral reef ecosystems are poorly understood. In this context, Tayrona National Natural Park (TNNP) in the Colombian Caribbean is an ideal study location because it contains coral reefs and is exposed to seasonal upwelling that strongly changes all key physical factors mentioned above. This study therefore investigated wind velocity and water temperature over two years, as well as water current velocity and direction for representative months of each season at a wind- and wave-exposed and a sheltered coral reef site in one exemplary bay of TNNP using meteorological data, temperature loggers, and an Acoustic Doppler Current Profiler (ADCP) in order to describe the spatiotemporal variations of the physical environment. -
Can't Catch My Breath! a Study of Metabolism in Fish. Subjects
W&M ScholarWorks Reports 2017 Can’t Catch My Breath! A Study of Metabolism in Fish. Subjects: Environmental Science, Marine/Ocean Science, Life Science/ Biology Grades: 6-8 Gail Schweiterman Follow this and additional works at: https://scholarworks.wm.edu/reports Part of the Marine Biology Commons, and the Science and Mathematics Education Commons Recommended Citation Schweiterman, G. (2017) Can’t Catch My Breath! A Study of Metabolism in Fish. Subjects: Environmental Science, Marine/Ocean Science, Life Science/Biology Grades: 6-8. VA SEA 2017 Lesson Plans. Virginia Institute of Marine Science, College of William and Mary. https://doi.org/10.21220/V5414G This Report is brought to you for free and open access by W&M ScholarWorks. It has been accepted for inclusion in Reports by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. Can’t catch my breath! A study of metabolism in fish Gail Schwieterman Virginia Institute of Marine Science Grade Level High School Subject area Biology, Environmental, or Marine Science This work is sponsored by the National Estuarine Research Reserve System Science Collaborative, which supports collaborative research that addresses coastal management problems important to the reserves. The Science Collaborative is funded by the National Oceanic and Atmospheric Administration and managed by the University of Michigan Water Center. 1. Activity Title: Can’t Catch My Breath! A study of metabolism in fish 2. Focus: Metabolism (Ecological drivers); The Scientific Method (Formulating Hypothesis) 3. Grade Levels/ Subject: HS Biology, HS Marine Biology 4. VA Science Standard(s) addressed: BIO.1. The student will demonstrate an understanding of scientific reasoning, logic, and the nature of science by planning and conducting investigations (including most Essential Understandings and nearly all Essential Knowledge and Skills) BIO.4a. -
Upwelling As a Source of Nutrients for the Great Barrier Reef Ecosystems: a Solution to Darwin's Question?
Vol. 8: 257-269, 1982 MARINE ECOLOGY - PROGRESS SERIES Published May 28 Mar. Ecol. Prog. Ser. / I Upwelling as a Source of Nutrients for the Great Barrier Reef Ecosystems: A Solution to Darwin's Question? John C. Andrews and Patrick Gentien Australian Institute of Marine Science, Townsville 4810, Queensland, Australia ABSTRACT: The Great Barrier Reef shelf ecosystem is examined for nutrient enrichment from within the seasonal thermocline of the adjacent Coral Sea using moored current and temperature recorders and chemical data from a year of hydrology cruises at 3 to 5 wk intervals. The East Australian Current is found to pulsate in strength over the continental slope with a period near 90 d and to pump cold, saline, nutrient rich water up the slope to the shelf break. The nutrients are then pumped inshore in a bottom Ekman layer forced by periodic reversals in the longshore wind component. The period of this cycle is 12 to 25 d in summer (30 d year round average) and the bottom surges have an alternating onshore- offshore speed up to 10 cm S-'. Upwelling intrusions tend to be confined near the bottom and phytoplankton development quickly takes place inshore of the shelf break. There are return surface flows which preserve the mass budget and carry silicate rich Lagoon water offshore while nitrogen rich shelf break water is carried onshore. Upwelling intrusions penetrate across the entire zone of reefs, but rarely into the Lagoon. Nutrition is del~veredout of the shelf thermocline to the living coral of reefs by localised upwelling induced by the reefs. -
Life on the Coral Reef
Coral Reef Teacher’s Guide Life on the Coral Reef Life on the Coral Reef THE CORAL REEF ECOSYSTEM The muddy silt drifts out to sea, covering the nearby Coral reefs provide the basis for the most productive coral reefs. Some corals can remove the silt, but many shallow water ecosystem in the world. An ecosystem cannot. If the silt is not washed off within a short pe- is a group of living things, such as coral, algae and riod of time by the current, the polyps suffocate and fishes, along with their non-living environment, such die. Not only the rainforest is destroyed, but also the as rocks, water, and sand. Each influences the other, neighboring coral reef. and both are necessary for the successful maintenance of life. If one is thrown out of balance by either natural Reef Zones or human-made causes, then the survival of the other Coral reefs are not uniform, but are shaped by the is seriously threatened. forces of the sea and the structure of the sea floor into DID YOU KNOW? All of the Earth’s ecosystems are a series of different parts or reef zones. Understand- interrelated, forming a shell of life that covers the ing these zones is useful in understanding the ecol- entire planet – the biosphere. For instance, if too many ogy of coral reefs. Keep in mind that these zones can trees are cut down in the rainforest, soil from the for- blend gradually into one another, and that sometimes est is washed by rain into rivers that run to the ocean. -
Harmful Algal Blooms (Habs) and Desalination: a Guide to Impacts, Monitoring, and Management
Manuals and Guides 78 Harmful Algal Blooms (HABs) and Desalination: A Guide to Impacts, Monitoring, and Management Edited by: Donald M. Anderson, Siobhan F.E. Boerlage, Mike B. Dixon UNESCO Manuals and Guides 78 Intergovernmental Oceanographic Commission Harmful Algal Blooms (HABs) and Desalination: A Guide to Impacts, Monitoring and Management Edited by: Donald M. Anderson* Biology Department, Woods Hole Oceanographic Institution Woods Hole, MA 02543 USA Siobhan F. E. Boerlage Boerlage Consulting Gold Coast, Queensland, Australia Mike B. Dixon MDD Consulting, Kensington Calgary, Alberta, Canada *Corresponding Author’s email: [email protected] UNESCO 2017 Bloom prevention and control 7 BLOOM PREVENTION AND CONTROL Clarissa R. Anderson1, Kevin G. Sellner2, and Donald M. Anderson3 1University of California, Santa Cruz, Santa Cruz, CA USA 2Chesapeake Research Consortium, Edgewater MD USA 3Woods Hole Oceanographic Institution, Woods Hole MA USA 7.1 Introduction ........................................................................................................................................... 205 7.2 Bloom prevention .................................................................................................................................. 207 7.2.1 Nutrient load reduction .................................................................................................................. 207 7.2.2 Nutrient load ................................................................................................................................. -
Marine Plants in Coral Reef Ecosystems of Southeast Asia by E
Global Journal of Science Frontier Research: C Biological Science Volume 18 Issue 1 Version 1.0 Year 2018 Type: Double Blind Peer Reviewed International Research Journal Publisher: Global Journals Online ISSN: 2249-4626 & Print ISSN: 0975-5896 Marine Plants in Coral Reef Ecosystems of Southeast Asia By E. A. Titlyanov, T. V. Titlyanova & M. Tokeshi Zhirmunsky Institute of Marine Biology Corel Reef Ecosystems- The coral reef ecosystem is a collection of diverse species that interact with each other and with the physical environment. The latitudinal distribution of coral reef ecosystems in the oceans (geographical distribution) is determined by the seawater temperature, which influences the reproduction and growth of hermatypic corals − the main component of the ecosystem. As so, coral reefs only occupy the tropical and subtropical zones. The vertical distribution (into depth) is limited by light. Sun light is the main energy source for this ecosystem, which is produced through photosynthesis of symbiotic microalgae − zooxanthellae living in corals, macroalgae, seagrasses and phytoplankton. GJSFR-C Classification: FOR Code: 060701 MarinePlantsinCoralReefEcosystemsofSoutheastAsia Strictly as per the compliance and regulations of : © 2018. E. A. Titlyanov, T. V. Titlyanova & M. Tokeshi. This is a research/review paper, distributed under the terms of the Creative Commons Attribution-Noncommercial 3.0 Unported License http://creativecommons.org/licenses/by-nc/3.0/), permitting all non commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. Marine Plants in Coral Reef Ecosystems of Southeast Asia E. A. Titlyanov α, T. V. Titlyanova σ & M. Tokeshi ρ I. Coral Reef Ecosystems factors for the organisms’ abundance and diversity on a reef. -
(DRIP) Glossary of Terms
DRIP GLOSSARY Advance Regeneration - Seedling or saplings that are present in the understory prior to removal of any overstory trees. Age Class - A group of trees in a stand that are at or nearly the same age. Artificial Regeneration – Creation of a new age class by direct seeding, or by planting seedlings or cuttings, or by equipment scarification. Basal Area - Total area of cross section of tree stems measured at breast height (4 feet above the ground), usually expressed in square feet per acre. Biological Diversity - The distribution and abundance of different plant and animal communities. The number and equitability of communities, with landscapes possessing more and equitably distributed communities having the highest diversity. Clearcut - An even-age method of regenerating a stand through the removal, in a single cut, of all trees larger than seedling. The new age class develops in a fully-exposed microclimate. In some situations small numbers of trees may be left within the clear-cut opening for some special purpose. Composition, Stand - The proportion of each tree species in a stand expressed as a percentage of either the total number, basal area, or volume of all tree species in the stand. Community – An assemblage of two or more populations living together in the same geographical area at the same time. Conditional migrator – Deer that move shorter distances and/or migrate infrequently compared to obligate migrators. This occurs primarily in the southern Upper Peninsula and northern Lower Peninsula where winter is typically mild and severe winters occur periodically or 2 out of 10 years. Conditional Summer Range – Range occupied by conditional migratory deer during the snow free seasons of spring, summer and fall. -
HARMFUL ALGAL BLOOMS in COASTAL WATERS: Options for Prevention, Control and Mitigation
Science for Solutions A A Special Joint Report with the Decision Analysis Series No. 10 National Fish and Wildlife Foundation onald F. Boesch, Anderson, Rita A dra %: Shumway, . Tesf er, Terry E. February 1997 U.S. DEPARTMENT OF COMMERCE U.S. DEPARTMENT OF THE INTERIOR William M. Daley, Secretary Bruce Babbitt, Secretary The Decision Analysis Series has been established by NOAA's Coastal Ocean Program (COP) to present documents for coastal resource decision makers which contain analytical treatments of major issues or topics. The issues, topics, and principal investigators have been selected through an extensive peer review process. To learn more about the COP or the Decision Analysis Series, please write: NOAA Coastal Ocean Office 1315 East West Highway Silver Spring, MD 209 10 phone: 301-71 3-3338 fax: 30 1-7 13-4044 Cover photo: The upper portion of photo depicts a brown tide event in an inlet along the eastern end of Long Island, New York, during Summer 7986. The blue water is Block lsland Sound. Photo courtesy of L. Cosper. Science for Solutions NOAA COASTAL OCEAN PROGRAM Special Joint Report with the Decision Analysis Series No. 10 National Fish and WildlifeFoundation HARMFUL ALGAL BLOOMS IN COASTAL WATERS: Options for Prevention, Control and Mitigation Donald F. Boesch, Donald M. Anderson, Rita A. Horner Sandra E. Shumway, Patricia A. Tester, Terry E. Whitledge February 1997 National Oceanic and Atmospheric Administration National Fish and Wildlife Foundation D. James Baker, Under Secretary Amos S. Eno, Executive Director Coastal Ocean Office Donald Scavia, Director This ~ublicationshould be cited as: Boesch, Donald F.