Sympatric Speciation As a Consequence of Male Pregnancy in Seahorses
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A Robust Test for Assortative Mating
European Journal of Human Genetics (2000) 8, 119–124 © 2000 Macmillan Publishers Ltd All rights reserved 1018–4813/00 $15.00 y www.nature.com/ejhg ARTICLE A robust test for assortative mating Emmanuelle G´enin1, Carole Ober2, Lowell Weitkamp3 and Glenys Thomson1 1Department of Integrative Biology, University of California, Berkeley, CA, USA; 2Department of Human Genetics, University of Chicago, Chicago, IL, USA; 3Department of Psychiatry and Division of Genetics, University of Rochester Medical Center, Rochester, NY, USA Testing for random mating in human populations is difficult due to confounding factors such as ethnic preference and population stratification. With HLA, the high level of polymorphism is an additional problem since it is rare for couples to share the same haplotype. Focus on an ethnically homogeneous population, where levels of polymorphism at HLA loci are more limited, may provide the best situation in which to detect non-random mating. However, such populations are often genetic isolates where there may be inbreeding to an extent that is difficult to quantify and account for. We have developed a test for random mating at a multiallelic locus that is robust to stratification and inbreeding. This test relies on the availability of genotypic information from the parents of both spouses. The focus of the test is on families where there is allele sharing between the parents of both spouses, so that potential spouses could share an allele. Denoting the shared allele at the locus of interest by A, then under the assumption of random mating, heterozygous parents AX should transmit allele A equally as frequently as allele X to their offspring. -
Sympatric Speciation: Models and Empirical Evidence
ANRV328-ES38-19 ARI 24 September 2007 7:20 Sympatric Speciation: Models and Empirical Evidence Daniel I. Bolnick1 and Benjamin M. Fitzpatrick2 1Section of Integrative Biology, University of Texas, Austin, Texas 78712; email: [email protected] 2Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, Tennessee 37996; email: benfi[email protected] Annu. Rev. Ecol. Evol. Syst. 2007. 38:459–87 Key Words First published online as a Review in Advance on assortative mating, disruptive selection, reinforcement August 8, 2007 reproductive isolation The Annual Review of Ecology, Evolution, and Systematics is online at Abstract http://ecolsys.annualreviews.org Sympatric speciation, the evolution of reproductive isolation with- This article’s doi: 10.1146/annurev.ecolsys.38.091206.095804 out geographic barriers, remains highly contentious. As a result of new empirical examples and theory, it is now generally accepted that Copyright c 2007 by Annual Reviews. All rights reserved sympatric speciation has occurred in at least a few instances, and is theoretically plausible. Instead, debate has shifted to whether sym- by Rutgers University Libraries on 09/21/09. For personal use only. 1543-592X/07/1201-0459$20.00 patric speciation is common, and whether models’ assumptions are generally met in nature. The relative frequency of sympatric spe- ciation will be difficult to resolve, because biogeographic changes have obscured geographical patterns underlying many past specia- Annu. Rev. Ecol. Evol. Syst. 2007.38:459-487. Downloaded from arjournals.annualreviews.org tion events. In contrast, progress is being made on evaluating the empirical validity of key theoretical conditions for sympatric spe- ciation. Disruptive selection and direct selection on mating traits, which should facilitate sympatric speciation, are biologically well supported. -
Sympatric Speciation in Ants
When houseguests become parasites: Sympatric speciation in ants Stewart H. Berlocher* Department of Entomology, University of Illinois at Urbana–Champaign, 320 Morrill Hall, 505 South Goodwin Avenue, Urbana, IL 61801 pecies are part of the common related species, and we are finally, if still argue that sympatric speciation was not coinage of biology. Taxonomists dimly, seeing some of the specific genes limited to a handful of special cases, but name them, developmental biolo- that underlie reproductive isolation (3). was quite common. Bush was driven to gists deconstruct them, physiolo- But fundamental questions remain his stance by the observation that one S unanswered. A critical question is how gists compare them, ecologists count could find many groups of closely re- them, conservation biologists conserve reproductive isolation could evolve in lated, sympatric species that use differ- them, and evolutionary biologists study the face of gene flow; random mating ent ecological niches. Conspicuous their multiplication and extinction. It within a population and gene flow be- among these groups are parasites of ani- may be that only the individual is a tween neighboring populations are enor- mals and plants, which are often highly more important biological unit than the mously powerful homogenizing forces. specialized ecologically and frequently species. It is thus no surprise that Dar- How could selection tear a single popu- mate on the host, a factor that poten- win named his great work On the Origin lation into two reproductively isolated tially links any adaptation to a new host of Species, nor is it a surprise that many with a reduction in gene flow between evolutionary biologists today concen- the new and ancestral populations. -
Assortative Mating and Sexual Dimorphism in the Common Tern
Wilson Bull., 98(l), 1986, pp. 93-100 ASSORTATIVE MATING AND SEXUAL DIMORPHISM IN THE COMMON TERN MALCOLM C. COULTER ’ ABSTRACT.-Although male and female Common Terns (Sterna hirundo)are almost iden- tical in plumage and in most external body measurements, males have longer, deeper, and wider bills than do females. Two patterns in the size relationships between mates are dem- onstrated. First, males tend to have larger bills than their mates. This may be explained by random mating, given the sexual dimorphism observed. Second, Common Terns mate assortatively according to bill size. This pattern may result if there is either a year-to-year component or an age component of bill size variation and if first-breeding birds return to the colony after experienced breeders have already established pairbonds and most birds retain their mates from year to year. ReceivedI I Jan. 1985, accepted30 Aug. 1985. Mating patterns may contribute significantly to the genetic structure of bird populations. When similar individuals tend to mate with each other (i.e., mating is positively assortative), progeny are more homozygous, and phenotypic variability in the population may be greater than when mating is either random or disassortative (Falconer 198 1, Halliday 1978, Par- tridge 1983; but see Lande 1977). Positive assortative mating based on the color morphs has been demonstrated for white and blue morphs of the Snow Goose (Chen cuerulescens) (Cooke et al. 1976). This involved discrimination according to a discrete variable (i.e., distinct blue and white morphs). It is more difficult to demonstrate mating patterns according to continuous variables, particularly in wild populations. -
Allopatric Speciation
Lecture 21 Speciation “These facts seemed to me to throw some light on the origin of species — that mystery of mysteries”. C. Darwin – The Origin What is speciation? • in Darwin’s words, speciation is the “multiplication of species”. What is speciation? • in Darwin’s words, speciation is the “multiplication of species”. • according to the BSC, speciation occurs when populations evolve reproductive isolating mechanisms. What is speciation? • in Darwin’s words, speciation is the “multiplication of species”. • according to the BSC, speciation occurs when populations evolve reproductive isolating mechanisms. • these barriers may act to prevent fertilization – this is prezygotic isolation. What is speciation? • in Darwin’s words, speciation is the “multiplication of species”. • according to the BSC, speciation occurs when populations evolve reproductive isolating mechanisms. • these barriers may act to prevent fertilization – this is prezygotic isolation. • may involve changes in location or timing of breeding, or courtship. What is speciation? • in Darwin’s words, speciation is the “multiplication of species”. • according to the BSC, speciation occurs when populations evolve reproductive isolating mechanisms. • these barriers may act to prevent fertilization – this is prezygotic isolation. • may involve changes in location or timing of breeding, or courtship. • barriers also occur if hybrids are inviable or sterile – this is postzygotic isolation. Modes of Speciation Modes of Speciation 1. Allopatric speciation 2. Peripatric speciation 3. Parapatric speciation 4. Sympatric speciation Modes of Speciation 1. Allopatric speciation 2. Peripatric speciation 3. Parapatric speciation 4. Sympatric speciation Modes of Speciation 1. Allopatric speciation Allopatric Speciation ‘‘The phenomenon of disjunction, or complete geographic isolation, is of considerable interest because it is almost universally believed to be a fundamental requirement for speciation.’’ Endler (1977) Modes of Speciation 1. -
Natural Selection in Action During Speciation
Natural selection in action during speciation Sara Via1 Departments of Biology and Entomology, University of Maryland, College Park, MD 20742 The role of natural selection in speciation, first described by The Spyglass Darwin, has finally been widely accepted. Yet, the nature and time A course of the genetic changes that result in speciation remain mysterious. To date, genetic analyses of speciation have focused almost exclusively on retrospective analyses of reproductive iso- lation between species or subspecies and on hybrid sterility or Intrinsic barriers to Ancestral inviability rather than on ecologically based barriers to gene flow. gene flow evolve… Population Diverged “Good Species” However, if we are to fully understand the origin of species, we Populations must analyze the process from additional vantage points. By studying the genetic causes of partial reproductive isolation be- The Magnifying Glass tween specialized ecological races, early barriers to gene flow can B be identified before they become confounded with other species differences. This population-level approach can reveal patterns that become invisible over time, such as the mosaic nature of the genome early in speciation. Under divergent selection in sympatry, Ancestral Intrinsic barriers to the genomes of incipient species become temporary genetic mo- Population gene flow evolve… Diverged “Good Species” saics in which ecologically important genomic regions resist gene Populations exchange, even as gene flow continues over most of the genome. Analysis of such mosaic genomes suggests that surprisingly large Fig. 1. Two ways to study the process of speciation, which is visualized here genomic regions around divergently selected quantitative trait loci as a continuum of divergence from a variable population to a divergent pair of populations, and on through the evolution of intrinsic barriers to gene flow can be protected from interrace recombination by ‘‘divergence to the recognition of good species. -
Biology 3 Origin and Diversity of Life
Biology 3 Origin and Diversity of Life Dr. Terence Lee What is Life? Virus? Ice Crystal? 1 What is necessary for Life? CONDITIONS ON EARTH AT THE TIME LIFE BEGAN The early atmosphere differed from that of today, and contained large amounts of carbon dioxide, nitrogen, methane, ammonia, hydrogen, and hydrogen sulfide. Small organic molecules eventually formed, providing the building blocks of life. THE UREY-MILLER EXPERIMENT In 1953, Stanley Miller and Harold Urey developed a simple four- step experiment that demonstrated how complex organic molecules could have arisen in earth’s early environment. 2 THE UREY-MILLER EXPERIMENT 1 They created a model of the chemicals present in the "warm little pond" and atmosphere early in earth's history: H 2, CH 4 (methane), and NH 3 (ammonia). 2 The atmosphere was subjected to sparks, to simulate lightning. 3 The atmosphere was cooled so that any compounds in it would rain back down into the water. 4 They examined the water, looking for organic molecules. Electrical charge 2 1 3 Cool 4 Heat Within a matter of days they discovered many organic molecules (including five different amino acids) in their primordial sea. RNA World Hypothesis • The world may have been filled with RNA- based life… 3 Why are cell membranes important? • Allow for higher concentrations of chemicals inside the cell relative to the outside. WHAT MAKES A SPECIES? SPECIES ARE • populations of organisms that interbreed with each other, • or could possibly breed, under natural conditions, • and are reproductively isolated from other such groups. Reproductive Isolation • Hybrids are bad. 4 Reproductive Isolation • Two ways to prevent hybrids: 1. -
Assortative Mating and Income Inequality
NBER WORKING PAPER SERIES MARRY YOUR LIKE: ASSORTATIVE MATING AND INCOME INEQUALITY Jeremy Greenwood Nezih Guner Georgi Kocharkov Cezar Santos Working Paper 19829 http://www.nber.org/papers/w19829 NATIONAL BUREAU OF ECONOMIC RESEARCH 1050 Massachusetts Avenue Cambridge, MA 02138 January 2014 This paper is prepared for the 2014 American Economic Review Papers and Proceedings. The views expressed herein are those of the authors and do not necessarily reflect the views of the National Bureau of Economic Research. Nezih Guner thanks the European Research Council (ERC Grant 263600) for financial support. NBER working papers are circulated for discussion and comment purposes. They have not been peer- reviewed or been subject to the review by the NBER Board of Directors that accompanies official NBER publications. © 2014 by Jeremy Greenwood, Nezih Guner, Georgi Kocharkov, and Cezar Santos. All rights reserved. Short sections of text, not to exceed two paragraphs, may be quoted without explicit permission provided that full credit, including © notice, is given to the source. Marry Your Like: Assortative Mating and Income Inequality Jeremy Greenwood, Nezih Guner, Georgi Kocharkov, and Cezar Santos NBER Working Paper No. 19829 January 2014 JEL No. D31,J11,J12,J22 ABSTRACT Has there been an increase in positive assortative mating? Does assortative mating contribute to household income inequality? Data from the United States Census Bureau suggests there has been a rise in assortative mating. Additionally, assortative mating affects household income inequality. In particular, if matching in 2005 between husbands and wives had been random, instead of the pattern observed in the data, then the Gini coefficient would have fallen from the observed 0.43 to 0.34, so that income inequality would be smaller. -
Adaptive Speciation
Adaptive Speciation Edited by Ulf Dieckmann, Michael Doebeli, Johan A.J. Metz, and Diethard Tautz PUBLISHED BY THE PRESS SYNDICATE OF THE UNIVERSITY OF CAMBRIDGE The Pitt Building, Trumpington Street, Cambridge, United Kingdom CAMBRIDGE UNIVERSITY PRESS The Edinburgh Building, Cambridge CB2 2RU, UK 40 West 20th Street, New York, NY 10011-4211, USA 477 Williamstown Road, Port Melbourne, VIC 3207, Australia Ruiz de Alarcón 13, 28014 Madrid, Spain Dock House, The Waterfront, Cape Town 8001, South Africa http: //www.cambridge.org c International Institute for Applied Systems Analysis 2004 This book is in copyright. Subject to statutory exception and to the provisions of relevant collective licensing agreements, no reproduction of any part may take place without the written permission of the International Institute for Applied Systems Analysis. http://www.iiasa.ac.at First published 2004 Printed in the United Kingdom at the University Press, Cambridge Typefaces Times; Zapf Humanist 601 (Bitstream Inc.) System LATEX A catalog record for this book is available from the British Library ISBN 0 521 82842 2 hardback Contents Contributing Authors xi Acknowledgments xiii Notational Standards xiv 1 Introduction 1 Ulf Dieckmann, Johan A.J. Metz, Michael Doebeli, and Diethard Tautz 1.1 AShiftinFocus............................... 1 1.2 AdaptiveSpeciation............................. 2 1.3 AdaptiveSpeciationinContext....................... 6 1.4 SpeciesCriteria................................ 9 1.5 RoutesofAdaptiveSpeciation....................... -
Assortative Mating at Loci Under Recent Natural Selection in Humans T Akihiro Nishia,*, Marcus Alexanderb, James H
BioSystems 187 (2020) 104040 Contents lists available at ScienceDirect BioSystems journal homepage: www.elsevier.com/locate/biosystems Assortative mating at loci under recent natural selection in humans T Akihiro Nishia,*, Marcus Alexanderb, James H. Fowlerc, Nicholas A. Christakisb,d a Department of Epidemiology, UCLA Fielding School of Public Health, Los Angeles, CA 90095, USA b Yale Institute for Network Science, Yale University, CT 06520, USA c Division of Medical Genetics and Department of Political Science, University of California, San Diego, La Jolla, CA, 92103, USA d Department of Sociology, Ecology and Evolutionary Biology, Medicine, Biomedical Engineering, and Statistics & Data Science, Yale University, New Haven, CT, USA ARTICLE INFO ABSTRACT Keywords: Genetic correlation between mates at specific loci can greatly alter the evolutionary trajectory of a species. Mate choice Genetic assortative mating has been documented in humans, but its existence beyond population stratification Assortative mating (shared ancestry) has been a matter of controversy. Here, we develop a method to measure assortative mating Positive selection across the genome at 1,044,854 single-nucleotide polymorphisms (SNPs), controlling for population stratifica- Humans tion and cohort-specific cryptic relatedness. Using data on 1683 human couples from two data sources, we find evidence for both assortative and disassortative mating at specific, discernible loci throughout the entire genome. Then, using the composite of multiple signals (CMS) score, we also show that the group of SNPs ex- hibiting the most assortativity has been under stronger recent positive selection. Simulations using realistic inputs confirm that assortative mating might indeed affect changes in allele frequency over time. These results suggest that genetic assortative mating may be speeding up evolution in humans. -
Estimation of Assortative Mating Preferences in the Arctic Skua
Heredity (1976),36 (2), 235-244 ESTIMATION OF ASSORTATIVE MATING PREFERENCES IN THE ARCTIC SKUA J. W. F. DAVIS and P. O'DONALD Department of Genetics, University of Cambridge, Milton Road, Cambridge CB4 I XH, England Received20.x.75 SUMMARY Methods are described for the maximum likelihood estimation of mating preferences in models of assortative mating for monogamous and polygamous organisms. These methods are applied to data of matings of the three pheno- types, pale, intermediate and dark of the Arctic Skua. The data were obtained by exhaustive surveys of the Arctic Skua populations on the islands of Fair Isle and Foula. The data give evidence of significant assortative mating of pale birds on Foula and intermediate birds on Fair Isle. The combined data show that there is very highly significant assortative mating, but only of intermediates. In previous surveys, data, in which intermediates and darks were not distinguished, were obtained from a number of islands in the Shetlands. These data, combined with the present data, show that the overall assortative mating of pale is very highly significant with no evidence of heterogeneity. The assortative mating of intermediate birds on Fair Isle agrees with other evidence showing that intermediate males have an advantage as a result of sexual selection. 1. INTRODUCTION MODELS of assortative mating (O'Donald, 1960; Karlin, 1969) can be described in terms of preferences among some individuals to mate with others phenotypically similar or dissimilar to themselves. The proportions of individuals who mate preferentially can be estimated from the actual numbers of the different matings. O'Donald, Davis and Broad (1974) obtained such estimates from matings of the phenotypes of the Arctic Skua (Stercorarius parasiticus), a monogamous seabird that lives in loose colonies. -
Genomic Linkage of Male Song and Female Acoustic Preference QTL Underlying a Rapid Species Radiation
Genomic linkage of male song and female acoustic preference QTL underlying a rapid species radiation Kerry L. Shaw1 and Sky C. Lesnick Department of Biology, University of Maryland, College Park, MD 20742 Edited by May R. Berenbaum, University of Illinois at Urbana-Champaign, Urbana, IL, and approved April 10, 2009 (received for review January 9, 2009) The genetic coupling hypothesis of signal-preference evolution, directional sexual selection when signal and preference distri- whereby the same genes control male signal and female prefer- butions are mismatched within a population (11). Two recent ence for that signal, was first inspired by the evolution of cricket studies, one in the olfactory realm (12) and the other in the visual acoustic communication nearly 50 years ago. To examine this realm (13), have suggested that physical linkage or pleiotropy hypothesis, we compared the genomic location of quantitative might bolster behavioral coupling of sexual signaling in the face trait loci (QTL) underlying male song and female acoustic prefer- of divergent evolution, an idea with a long history (1, 6) but little ence variation in the Hawaiian cricket genus Laupala. We docu- empirical support. Furthermore, recent modeling suggests that ment a QTL underlying female acoustic preference variation be- physical linkage can promote a genetic correlation between tween 2 closely related species (Laupala kohalensis and Laupala signal and preference and thereby enhance coevolution in sexual paranigra). This preference QTL colocalizes with a song QTL iden- signaling systems (14). tified previously, providing compelling evidence for a genomic In crickets (family Gryllidae), males sing with specialized struc- linkage of the genes underlying these traits.