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Plant-Microbe Symbioses: a Continuum from Commensalism to Parasitism
UCLA UCLA Previously Published Works Title Plant-microbe symbioses: A continuum from commensalism to parasitism Permalink https://escholarship.org/uc/item/6kx779h1 Journal Symbiosis, 37(1-3) ISSN 0334-5114 Author Hirsch, Ann M. Publication Date 2004 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Symbiosis, 37 (2004) xx–xx 1 Balaban, Philadelphia/Rehovot Review article. Plant-Microbe Symbioses: A Continuum from Commensalism to Parasitism ANN M. HIRSCH Department of Molecular, Cell, and Developmental Biology and Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA 90095-1606, USA, Tel. +1-310-206-8673, Fax. +1-310-206-5413, Email. [email protected] Received October 28, 2003; Accepted January 27, 2004 Abstract Photosynthetic organisms establish symbioses with a wide range of microorganisms. This review examines the diversity of symbiotic interactions, and proposes that there is a continuum from commensalism to mutualism to pathogenesis/parasitism in plant-microbe associations. The advantage of considering commensalism, mutualism, and pathogenesis/parasitism as a continuum rather than as discrete relationships between hosts and microbes, as they have been considered in the past, is that it will motivate us to focus more on common molecular mechanisms. Keywords: ?? 1. Introduction Plants establish mutualistic, often described as symbiotic, interactions with myriad organisms, both prokaryotic and eukaryotic. Some of the most prominent photosynthetic mutualisms are illustrated in Fig. 1. Although technically not a plant symbiosis, lichens are photosynthetic and represent an excellent example of a beneficial interaction (Fig. 1A). Presented at the 4th International Symbiosis Congress, August 17–23, 2003, Halifax, Canada 0334-5114/2004/$05.50 ©2004 Balaban 2 A.M. -
Ecological Principles and Function of Natural Ecosystems by Professor Michel RICARD
Intensive Programme on Education for sustainable development in Protected Areas Amfissa, Greece, July 2014 ------------------------------------------------------------------------ Ecological principles and function of natural ecosystems By Professor Michel RICARD Summary 1. Hierarchy of living world 2. What is Ecology 3. The Biosphere - Lithosphere - Hydrosphere - Atmosphere 4. What is an ecosystem - Ecozone - Biome - Ecosystem - Ecological community - Habitat/biotope - Ecotone - Niche 5. Biological classification 6. Ecosystem processes - Radiation: heat, temperature and light - Primary production - Secondary production - Food web and trophic levels - Trophic cascade and ecology flow 7. Population ecology and population dynamics 8. Disturbance and resilience - Human impacts on resilience 9. Nutrient cycle, decomposition and mineralization - Nutrient cycle - Decomposition 10. Ecological amplitude 11. Ecology, environmental influences, biological interactions 12. Biodiversity 13. Environmental degradation - Water resources degradation - Climate change - Nutrient pollution - Eutrophication - Other examples of environmental degradation M. Ricard: Summer courses, Amfissa July 2014 1 1. Hierarchy of living world The larger objective of ecology is to understand the nature of environmental influences on individual organisms, populations, communities and ultimately at the level of the biosphere. If ecologists can achieve an understanding of these relationships, they will be well placed to contribute to the development of systems by which humans -
Symbiotic Relationship in Which One Organism Benefits and the Other Is Unaffected
Ecology Quiz Review – ANSWERS! 1. Commensalism – symbiotic relationship in which one organism benefits and the other is unaffected. Mutualism – symbiotic relationship in which both organisms benefit. Parasitism – symbiotic relationship in which one organism benefits and the other is harmed or killed. Predation – a biological interaction where a predator feeds on a prey. 2A. Commensalism B. Mutualism C. Parasitism D. Predation 3. Autotrophic organisms produce their own food by way of photosynthesis. They are also at the base of a food chain or trophic pyramid. 4. Answer will vary – You will need two plants, two herbivores, and two carnivores 5. Decreases. Only 10% of the energy available at one level is passed to the next level. 6. If 10,000 units of energy are available to the grass at the bottom of the food chain, only 1000 units of energy will be available to the primary consumer, and only 100 units will be available to the secondary consumer. 7. Population is the number of a specific species living in an area. 8. B – All members of the Turdis migratorius species. 9. The number of secondary consumers would increase. 10. The energy decreases as you move up the pyramid which is indicated by the pyramid becoming smaller near the top. 11. Second highest-level consumer would increase. 12. Primary consumer would decrease due to higher numbers of secondary consumer. 13. The number of organisms would decrease due to the lack of food for primary consumers. Other consumers would decrease as the numbers of their food source declined. 14. Number of highest-level consumers would decrease due to lack of food. -
Chapter 3. Nutrient Cycling by Fungi in Wet Tropical Forests
Chapter 3 Nutrient cycling by fungi in wet tropical forests D. Jean Lodge U.S.D.A. Forest Service, Forest Products Laboratory, Center for Forest Mycology Reseach, PO Box B, Palmer, Pueto Rico 00721, U.S.A. Introduction Fungi are primarily responsible for the recycling of mineral nutrients through decomposition of organic matter (Swift, Heal & Anderson, 1979) and the uptake and transfer of these nutrients into plants via mycorrizal fungi (Janos, 1983). In addition, fungi and other soil microorganisms serve alternately as sources and sinks of labile nutrients that are necessary for plant growth (Marumoto, Anderson & Domsch 1983 Yang & Insam 1991). Thus, fungal and microbial biomass can control significant fractions of the labile nutrient pools in some humid and wet tropical forests (Marumoto et al., 1982; Lodge, 1985; Yang & Insam, 1991), and regulate the availability of nutrients that may limit plant growth (Jordan 1985; Hilton, 1987; Singh et al., 1989 Lee, Han & Jordan 1990 Behera Pati & Basu, 1991; Yang & Insam, 1991). The term biomass normally refers only to living organisms, but it is used more broadly in this chapter to refer to dead as well as living microorganisms as both contain nutrients. Although humid tropical forests often have large stature and an abundance of vegetation, their growth and productivity is frequently limited by the availability of mineral nutrients. A diversity of soils occurs in the wet tropics so it is difficult to generalise about nutrient limitation. However, the availability of phosphorus to higher plants is generally limited because phosphorus combines with aluminium and iron oxides in the highly weathered soils to form insoluble complexes (Sanchez 1976). -
About the Book the Format Acknowledgments
About the Book For more than ten years I have been working on a book on bryophyte ecology and was joined by Heinjo During, who has been very helpful in critiquing multiple versions of the chapters. But as the book progressed, the field of bryophyte ecology progressed faster. No chapter ever seemed to stay finished, hence the decision to publish online. Furthermore, rather than being a textbook, it is evolving into an encyclopedia that would be at least three volumes. Having reached the age when I could retire whenever I wanted to, I no longer needed be so concerned with the publish or perish paradigm. In keeping with the sharing nature of bryologists, and the need to educate the non-bryologists about the nature and role of bryophytes in the ecosystem, it seemed my personal goals could best be accomplished by publishing online. This has several advantages for me. I can choose the format I want, I can include lots of color images, and I can post chapters or parts of chapters as I complete them and update later if I find it important. Throughout the book I have posed questions. I have even attempt to offer hypotheses for many of these. It is my hope that these questions and hypotheses will inspire students of all ages to attempt to answer these. Some are simple and could even be done by elementary school children. Others are suitable for undergraduate projects. And some will take lifelong work or a large team of researchers around the world. Have fun with them! The Format The decision to publish Bryophyte Ecology as an ebook occurred after I had a publisher, and I am sure I have not thought of all the complexities of publishing as I complete things, rather than in the order of the planned organization. -
Adaptations for Survival: Symbioses, Camouflage
Adaptations for Survival: Symbioses, Camouflage & Mimicry OCN 201 Biology Lecture 11 http://www.oceanfootage.com/stockfootage/Cleaning_Station_Fish/ http://www.berkeley.edu/news/media/releases/2005/03/24_octopus.shtml Symbiosis • Parasitism - negative effect on host • Commensalism - no effect on host • Mutualism - both parties benefit Often involves food but benefits may also include protection from predators, dispersal, or habitat Parasites Leeches (Segmented Worms) Tongue Louse (Crustacean) Nematodes (Roundworms) Whale Barnacles & Lice Commensalism or Parasitism? Commensalism or Mutualism? http://magma.nationalgeographic.com/ http://www.scuba-equipment-usa.com/marine/APR04/ Mutualism Cleaner Shrimp http://magma.nationalgeographic.com/ Anemone Hermit Crab http://www.scuba-equipment-usa.com/marine/APR04/ Camouflage Countershading Sharks Birds Countershading coloration of the Caribbean reef shark © George Ryschkewitsch Fish JONATHAN CHESTER Mammals shiftingbaselines.org/blog/big_tuna.jpg http://www.nmfs.noaa.gov/pr/images/cetaceans/orca_spyhopping-noaa.jpg Adaptive Camouflage Camouflage http://www.cspangler.com/images/photos/aquarium/weedy-sea-dragon2.jpg Camouflage by Mimicry Mimicry • Batesian: an edible species evolves to look similar to an inedible species to avoid predation • Mullerian: two or more inedible species all evolve to look similar maximizing efficiency with which predators learn to avoid them Batesian Mimicry An edible species evolves to resemble an inedible species to avoid predators Pufferfish (poisonous) Filefish (non-poisonous) -
Slime Molds: Biology and Diversity
Glime, J. M. 2019. Slime Molds: Biology and Diversity. Chapt. 3-1. In: Glime, J. M. Bryophyte Ecology. Volume 2. Bryological 3-1-1 Interaction. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 18 July 2020 and available at <https://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 3-1 SLIME MOLDS: BIOLOGY AND DIVERSITY TABLE OF CONTENTS What are Slime Molds? ....................................................................................................................................... 3-1-2 Identification Difficulties ...................................................................................................................................... 3-1- Reproduction and Colonization ........................................................................................................................... 3-1-5 General Life Cycle ....................................................................................................................................... 3-1-6 Seasonal Changes ......................................................................................................................................... 3-1-7 Environmental Stimuli ............................................................................................................................... 3-1-13 Light .................................................................................................................................................... 3-1-13 pH and Volatile Substances -
The Importance of Soil Food Web for Healthy Environment and Sustainable Development
International Journal of Applied Research 2015; 1(3): 15-20 ISSN Print: 2394-7500 ISSN Online: 2394-5869 Impact Factor: 3.4 The importance of soil food web for healthy IJAR 2015; 1(3): 15-20 www.allresearchjournal.com environment and sustainable development Received: 18-01-2015 Accepted: 08-02-2015 Rajeev Ranjan, M. Divya and M. Bavitha Rajeev Ranjan Abstract PG Research Scholar, Soil food web is a natural network of consumer resource interactions among different functional Dept. of Aquaculture, groups of soil organisms which are occur in the soil ecosystem. Soil is a complex, unconsolidated Fisheries College & Research mixture of inorganic, organic, and living material that is found on the immediate surface of the earth Institute, TNFU, that supports many important functions for plants, animals, and humans. The soil food web is very Thoothukudi-8, dynamic, complex and interchanging depending on its ecosystem. Nutrients in soil in their most basic Tamil Nadu, India. form come from fully decomposed organic matter which we call compost. Decomposition of organic matter is largely a biological process that occurs naturally. The organisms found in the soil food web M. Divya PG Research Scholar, carry out a large amount of microbial processes such as decomposition, mineralization, Dept. of Aquatic environment immobilization, respiration, and fixation along with many others. Without soil food web, plants management, would not obtain the nutrients which are necessary for growth. Nutrient exchanges between organic Fisheries College & Research matter, water and soil are essential to soil fertility and need to be maintained for sustainable Institute, TNFU, Thoothukudi- production. A diverse and complete soil food web where soils are well structured and fertile through 8, T.N. -
The Ecology of Mutualism
Annual Reviews www.annualreviews.org/aronline AngRev. Ecol. Syst. 1982.13:315--47 Copyright©1982 by Annual Reviews lnc. All rightsreserved THE ECOLOGY OF MUTUALISM Douglas 1t. Boucher Departementdes sciences biologiques, Universit~ du Quebec~ Montreal, C. P. 8888, Suet. A, Montreal, Quebec, CanadaH3C 3P8 Sam James Departmentof Ecologyand Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA48109 Kathleen H. Keeler School of Life Sciences, University of Nebraska,Lincoln, Nebraska,USA 68588 INTRODUCTION Elementaryecology texts tell us that organismsinteract in three fundamen- tal ways, generally given the namescompetition, predation, and mutualism. The third memberhas gotten short shrift (264), and even its nameis not generally agreed on. Terms that may be considered synonyms,in whole or part, are symbiosis, commensalism,cooperation, protocooperation, mutual aid, facilitation, reciprocal altruism, and entraide. Weuse the term mutual- by University of Kanas-Lawrence & Edwards on 09/26/05. For personal use only. ism, defined as "an interaction betweenspecies that is beneficial to both," Annu. Rev. Ecol. Syst. 1982.13:315-347. Downloaded from arjournals.annualreviews.org since it has both historical priority (311) and general currency. Symbiosis is "the living together of two organismsin close association," and modifiers are used to specify dependenceon the interaction (facultative or obligate) and the range of species that can take part (oligophilic or polyphilic). We make the normal apologies concerning forcing continuous variation and diverse interactions into simple dichotomousclassifications, for these and all subsequentdefinitions. Thus mutualism can be defined, in brief, as a -b/q- interaction, while competition, predation, and eommensalismare respectively -/-, -/q-, and -t-/0. There remains, however,the question of howto define "benefit to the 315 0066-4162/82/1120-0315 $02.00 Annual Reviews www.annualreviews.org/aronline 316 BOUCHER, JAMES & KEELER species" without evoking group selection. -
Bio112 Home Work Community Structure
Name: Date: Bio112 Home Work Community Structure Multiple Choice Identify the choice that best completes the statement or answers the question. ____ 1. All of the populations of different species that occupy and are adapted to a given habitat are referred to by which term? a. biosphere b. community c. ecosystem d. niche e. ecotone ____ 2. Niche refers to the a. home range of an animal. b. preferred habitat for an organism. c. functional role of a species in a community. d. territory occupied by a species. e. locale in which a species lives. ____ 3. A relationship in which benefits flow both ways between the interacting species is a. a neutral relationship. b. commensalism. c. competitive exclusion. d. mutualism. e. parasitism. ____ 4. A one-way relationship in which one species benefits and directly hurts the other is called a. commensalism. b. competitive exclusion. c. parasitism. d. obligate mutualism. e. neutral relationship. ____ 5. The interaction in which one species benefits and the second species is neither harmed nor benefited is a. mutualism. b. parasitism. c. commensalism. d. competition. e. predation. ____ 6. The interaction between two species in which one species benefits and the other species is harmed is a. mutualism. b. commensalism. c. competition. d. predation. e. none of these ____ 7. The relationship between the yucca plant and the yucca moth that pollinates it is best described as a. camouflage. b. commensalism. c. competitive exclusion. d. mutualism. e. all of these Name: Date: ____ 8. Competitive exclusion is the result of a. mutualism. b. commensalism. -
Microbial Interactions Lecture 2
Environmental Microbiology CLS 416 Lecture 2 Microbial interactions Sarah Alharbi Clinical laboratory department Collage of applied medical sciences King Saud University Outline • Important terms (Symbiosis,ectosymbiont.Endosymbiont, ecto/endosymbiosis • Positive interactions (mutualism, protocooperation, commensalism) • Negative interactions(predation, parasitism, amensalism,and competition) • Nutrient Cycling Interactions • The importance of understanding the principle of microbial interactions (Examples from the literature) Microbial interactions Symbiosis An association of two or more different species Ectosymbisis One organism can be located on the surface of another, as an ectosymbiont. In this case, the ectosymbiont usually is a smaller organism located on the surface of a larger organism. Endosymbiosis one organism can be located within another organism as an endosymbiont Ecto/ endosymbiosis. microorganisms live on both the inside and the outside of another organism - Examples (Ecto/ endosymbiosis) 1- Thiothrix species, a sulfur-using bacterium, which is at- ached to the surface of a mayfly larva and which itself contains a parasitic bacterium. 2- Fungi associated with plant roots (mycorrhizal fungi) often contain endosymbiotic bacteria, as well as having bacteria living on their surfaces • Symbiotic relationships can be intermittent and cyclic or permanent • Symbiotic interactions do not occur independently. Each time a microorganism interacts with other organisms and their environments, a series of feedback responses occurs in the larger biotic community that will impact other parts of ecosystems. Microbial interactions Positive interactions •Mutualism •Protocooperation •Commensalism Negative interactions • Predation • Parasitism • Amensalism • Competition Mutualism Mutualism [Latin mutuus, borrowed or reciprocal] defines the relationship in which some reciprocal benefit accrues to both partners. • Relationship with some degree of obligation • partners cannot live separately • Mutualist and host are dependent on each other 6 Examples of Mutalism 1. -
Commensalism, Parasitism, & Mutualism
69 Symbiosis in the Glades (Commensalism, Parasitism, Mutualism) OVERVIEW: Mutualism, parasitism, and commensalism all describe relationships in various ways that benefits an organism, harms an organism or neither harms nor helps an organism. In the cedar glade, we’ll look at a few examples. GRADE LEVEL: 6 – 12 TIME: One or two 50-minute class periods depending on student input and/or extension SETTING: Classroom OBJECTIVES: Student will describe the difference between mutualism, commensalism, and parasitism. These terms will be illustrated by using some examples that may be found in cedar glades of Middle Tennessee. LEARNING STANDARDS CORRELATED: Science GLE 0607.2.1; CLE 3210.2.1; 3255.3.6 QUESTION: What biological relationships exist among unlike organisms in the cedar glade? MATERIALS: 1 Cedar Glade Species List per student of student research team Additional field guides of resource books BACKGROUND: The cedar glade is no different from any other habitat in regard to complex biological relationships. One example of mutualism in the glade includes lichens. Lichens in this area often appear as the greenish-gray flaky crust you may see on tree bark or on rocks or as clumps of greenish-gray mass we often erroneously refer to as “reindeer moss.” This “reindeer moss” is very soft after rain or heavy dew has fallen. The lichen becomes dry and brittle during dry weather. The reason why lichens are considered to have a mutualistic relationship is because the mass that we see is a combination of an algae and a fungus. The fungus obtains food from photosynthesis from the algae and the algae in turn, has a place to live because of the fungus.