Sponge Contributions to the Geology and Biology of Reefs: Past, Present, and Future 5
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Host Population Genetics and Biogeography Structure the Microbiome of the Sponge Cliona Delitrix
Received: 11 October 2019 | Revised: 20 December 2019 | Accepted: 23 December 2019 DOI: 10.1002/ece3.6033 ORIGINAL RESEARCH Host population genetics and biogeography structure the microbiome of the sponge Cliona delitrix Cole G. Easson1,2 | Andia Chaves-Fonnegra3 | Robert W. Thacker4 | Jose V. Lopez2 1Department of Biology, Middle Tennessee State University, Murfreesboro, TN Abstract 2Halmos College of Natural Sciences Sponges occur across diverse marine biomes and host internal microbial communities and Oceanography, Nova Southeastern that can provide critical ecological functions. While strong patterns of host specific- University, Dania Beach, FL 3Harriet L. Wilkes Honors College, Harbor ity have been observed consistently in sponge microbiomes, the precise ecological Branch Oceanographic Institute, Florida relationships between hosts and their symbiotic microbial communities remain to be Atlantic University, Fort Pierce, FL fully delineated. In the current study, we investigate the relative roles of host popu- 4Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY lation genetics and biogeography in structuring the microbial communities hosted by the excavating sponge Cliona delitrix. A total of 53 samples, previously used to Correspondence Cole G. Easson, Department of Biology, demarcate the population genetic structure of C. delitrix, were selected from two lo- Middle Tennessee State University, cations in the Caribbean Sea and from eight locations across the reefs of Florida and Murfreesboro, TN 37132, USA. Email: [email protected] the Bahamas. Microbial community diversity and composition were measured using Illumina-based high-throughput sequencing of the 16S rRNA V4 region and related to Funding information Division of Ocean Sciences, Grant/ host population structure and geographic distribution. -
Reef Sponges of the Genus Agelas (Porifera: Demospongiae) from the Greater Caribbean
Zootaxa 3794 (3): 301–343 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3794.3.1 http://zoobank.org/urn:lsid:zoobank.org:pub:51852298-F299-4392-9C89-A6FD14D3E1D0 Reef sponges of the genus Agelas (Porifera: Demospongiae) from the Greater Caribbean FERNANDO J. PARRA-VELANDIA1,2, SVEN ZEA2,4 & ROB W. M. VAN SOEST3 1St John's Island Marine Laboratory, Tropical Marine Science Institute (TMSI), National University of Singapore, 18 Kent Ridge Road, Singapore 119227. E-mail: [email protected] 2Universidad Nacional de Colombia, Sede Caribe, Centro de Estudios en Ciencias del Mar—CECIMAR; c/o INVEMAR, Calle 25 2- 55, Rodadero Sur, Playa Salguero, Santa Marta, Colombia. E-mail: [email protected] 3Netherlands Centre for Biodiversity Naturalis, P.O.Box 9517 2300 RA Leiden, The Netherlands. E-mail: [email protected] 4Corresponding author Table of contents Abstract . 301 Introduction . 302 The genus Agelas in the Greater Caribbean . 302 Material and methods . 303 Classification . 304 Phylum Porifera Grant, 1835 . 304 Class Demospongiae Sollas, 1875 . 304 Order Agelasida Hartman, 1980 . 304 Family Agelasidae Verrill, 1907 . 304 Genus Agelas Duchassaing & Michelotti, 1864 . 304 Agelas dispar Duchassaing & Michelotti, 1864 . 306 Agelas cervicornis (Schmidt, 1870) . 311 Agelas wiedenmayeri Alcolado, 1984. 313 Agelas sceptrum (Lamarck, 1815) . 315 Agelas dilatata Duchassaing & Michelotti, 1864 . 316 Agelas conifera (Schmidt, 1870). 318 Agelas tubulata Lehnert & van Soest, 1996 . 321 Agelas repens Lehnert & van Soest, 1998. 324 Agelas cerebrum Assmann, van Soest & Köck, 2001. 325 Agelas schmidti Wilson, 1902 . -
Morphology and Histology of the Testicles
MORPHOLOGY AND HISTOLOGY OF THE TESTICLES OF QUEEN ANGELFISH Holacanthus ciliaris Arquivos de Ciências do Mar (LINNAEUS, 1758) (TELEOSTEI: PERCIFORMES: POMACANTHIDAE) Morfologia e histologia dos testículos do peixe-anjo Holacanthus ciliaris (Linnaeus, 1758) (Teleostei: Perciformes: Pomacanthidae) Mara C. Nottingham1 , José Roberto Feitosa Silva2 , Maria Elisabeth de Araújo1, 3 ABSTRACT Aspects of the morphology and histology of the testicles of Holacanthus ciliaris were studied in this research. Monthly collections of living fish, totaling 39 males, were carried out between December, 2000 and November, 2001 on the coast of Ceará State, Brazil. The total length of the fish varied between 63.4 mm and 334 mm, the standard length between 50.9 mm and 270 mm, and the total weight between 6,70 g and 590 g. The testicles were bilobed and ribbon-like in shape, with firm texture and coloration varying between transparent and amber. In the histological study, male gametes were found in all espermatogenesis stages along the months of the year. Key words: Holacanthus ciliaris, Pomacanthidae, reef fish, reproduction. RESUMO Aspectos da morfologia e histologia de testículos de Holacanthus ciliaris foram estudados nesta pesquisa. Coletas mensais de peixes vivos, totalizando 39 machos, foram realizadas entre os meses de dezembro de 2000 e novembro de 2001 na costa do Estado do Ceará. O comprimento total dos peixes variou entre 63,4 e 334mm, o comprimento padrão entre 50,9 e 270mm e o peso total entre 6,70 e 590g. Os testículos apresentavam-se bilobulados, em forma de fita, com textura firme e coloração variando entre transparente e âmbar. No estudo histológico foram encontrados gametas masculinos em todos os estágios da espermatogênese durante os meses do ano. -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
POMACANTHIDAE Ángeles POMACANTHIDAE Angels
POMACANTHIDAE POMACANTHIDAE ángeles angels Todos los pomacantos tienen una espina fuerte en el ángulo All pomacanthids have a strong spine at the angle of the del preopérculo. preopercle. Pomacanthus arcuatus, ángel café – Cuerpo gris, escamas Pomacanthus arcuatus, grey angelfish – Body gray or brown, con borde oscuro; lado interno de las aletas pectoral amarillo. scales dark-edged; inside of pectoral fins yellow. Young black Individuos jóvenes color negro con barras amarillas; margen with yellow bars; caudal-fin margin clear; yellow stripe on de la aleta caudal claro; una franja amarilla en la frente que forehead crosses mouth, ending on chin. Caudal fin truncate in cruza la boca, terminando en el mentón. Aleta caudal truncada adults. Nine dorsal-fin spines. en adultos. Nueve espinas de la aleta dorsal (Evermann & Marsh 1900). Pomacanthus paru, French angelfish – Body black, scales yellow-edged; pectoral fin base yellow. Young black with yel- Pomacanthus paru, ángel negro – Cuerpo negro, escamas con low bars; caudal-fin margin bright yellow; yellow stripe on borde amarillo; base de la aleta pectoral amarillo. Individuos forehead ends at base of upper lip. jóvenes color negro con barras amarillas; margen de la aleta caudal amarillo brillante; una franja amarillo en la frente que Holacanthus tricolor, rock beauty – Body mostly black, fore- termina en la base del labio superior (Burgess 2002, UCR body and tail bright yellow. Young yellow with a large black, 1300-7). blue-ringed, ocellus below soft dorsal fin. Holacanthus tricolor, isabelita tricolor – Cuerpo mayormente Holacanthus ciliaris, queen angelfish – Body deep blue with negro, frente y cola amarillo brillante. Individuos jóvenes ama- an orange spot on each scale; entire caudal fin and pectoral rillo con un ocelo negro grande con un borde azul, debajo de fins yellow; a large black spot on nape outlined in blue; blue la aleta dorsal suave (Evermann & Marsh 1900). -
Satellite Monitoring of Coastal Marine Ecosystems a Case from the Dominican Republic
Satellite Monitoring of Coastal Marine Ecosystems: A Case from the Dominican Republic Item Type Report Authors Stoffle, Richard W.; Halmo, David Publisher University of Arizona Download date 04/10/2021 02:16:03 Link to Item http://hdl.handle.net/10150/272833 SATELLITE MONITORING OF COASTAL MARINE ECOSYSTEMS A CASE FROM THE DOMINICAN REPUBLIC Edited By Richard W. Stoffle David B. Halmo Submitted To CIESIN Consortium for International Earth Science Information Network Saginaw, Michigan Submitted From University of Arizona Environmental Research Institute of Michigan (ERIM) University of Michigan East Carolina University December, 1991 TABLE OF CONTENTS List of Tables vi List of Figures vii List of Viewgraphs viii Acknowledgments ix CHAPTER ONE EXECUTIVE SUMMARY 1 The Human Dimensions of Global Change 1 Global Change Research 3 Global Change Theory 4 Application of Global Change Information 4 CIESIN And Pilot Research 5 The Dominican Republic Pilot Project 5 The Site 5 The Research Team 7 Key Findings 7 CAPÍTULO UNO RESUMEN GENERAL 9 Las Dimensiones Humanas en el Cambio Global 9 La Investigación del Cambio Global 11 Teoría del Cambio Global 12 Aplicaciones de la Información del Cambio Global 13 CIESIN y la Investigación Piloto 13 El Proyecto Piloto en la República Dominicana 14 El Lugar 14 El Equipo de Investigación 15 Principales Resultados 15 CHAPTER TWO REMOTE SENSING APPLICATIONS IN THE COASTAL ZONE 17 Coastal Surveys with Remote Sensing 17 A Human Analogy 18 Remote Sensing Data 19 Aerial Photography 19 Landsat Data 20 GPS Data 22 Sonar -
Reef Encounter Reef Encounter
Volume 30, No. 2 September 2015 Number 42 REEF ENCOUNTER REEF ENCOUNTER United Nations Climate Change Conference Education about Reefs and Climate Change Climate Change: Reef Fish Ecology, Genetic Diversity and Coral Disease Society Honors and Referendum Digital Underwater Cameras Review The News Journal of the International Society for Reef Studies ISSN 0225-27987 REEF ENCOUNTER The News Journal of the International Society for Reef Studies ISRS Information REEF ENCOUNTER Reef Encounter is the magazine style news journal of the International Society for Reef Studies. It was first published in 1983. Following a short break in production it was re-launched in electronic (pdf) form. Contributions are welcome, especially from members. Please submit items directly to the relevant editor (see the back cover for author’s instructions). Coordinating Editor Rupert Ormond (email: [email protected]) Deputy Editor Caroline Rogers (email: [email protected]) Editor Reef Perspectives (Scientific Opinions) Rupert Ormond (email: [email protected]) Editor Reef Currents (General Articles) Caroline Rogers (email: [email protected]) Editors Reef Edge (Scientific Letters) Dennis Hubbard (email: [email protected]) Alastair Harborne (email: [email protected]) Edwin Hernandez-Delgado (email: [email protected]) Nicolas Pascal (email: [email protected]) Editor News & Announcements Sue Wells (email: [email protected]) Editor Book & Product Reviews Walt Jaap (email: [email protected]) INTERNATIONAL SOCIETY FOR REEF STUDIES The International Society for Reef Studies was founded in 1980 at a meeting in Cambridge, UK. Its aim under the constitution is to promote, for the benefit of the public, the production and dissemination of scientific knowledge and understanding concerning coral reefs, both living and fossil. -
Caribbean Wildlife Undersea 2017
Caribbean Wildlife Undersea life This document is a compilation of wildlife pictures from The Caribbean, taken from holidays and cruise visits. Species identification can be frustratingly difficult and our conclusions must be checked via whatever other resources are available. We hope this publication may help others having similar problems. While every effort has been taken to ensure the accuracy of the information in this document, the authors cannot be held re- sponsible for any errors. Copyright © John and Diana Manning, 2017 1 Angelfishes (Pomacanthidae) Corals (Cnidaria, Anthozoa) French angelfish 7 Bipinnate sea plume 19 (Pomacanthus pardu) (Antillogorgia bipinnata) Grey angelfish 8 Black sea rod 20 (Pomacanthus arcuatus) (Plexaura homomalla) Queen angelfish 8 Blade fire coral 20 (Holacanthus ciliaris) (Millepora complanata) Rock beauty 9 Branching fire coral 21 (Holacanthus tricolor) (Millepora alcicornis) Townsend angelfish 9 Bristle Coral 21 (Hybrid) (Galaxea fascicularis) Elkhorn coral 22 Barracudas (Sphyraenidae) (Acropora palmata) Great barracuda 10 Finger coral 22 (Sphyraena barracuda) (Porites porites) Fire coral 23 Basslets (Grammatidae) (Millepora dichotoma) Fairy basslet 10 Great star coral 23 (Gramma loreto) (Montastraea cavernosa) Grooved brain coral 24 Bonnetmouths (Inermiidae) (Diploria labyrinthiformis) Boga( Inermia Vittata) 11 Massive starlet coral 24 (Siderastrea siderea) Bigeyes (Priacanthidae) Pillar coral 25 Glasseye snapper 11 (Dendrogyra cylindrus) (Heteropriacanthus cruentatus) Porous sea rod 25 (Pseudoplexaura -
Taxonomic Checklist of CITES Listed Coral Species Part II
CoP16 Doc. 43.1 (Rev. 1) Annex 5.2 (English only / Únicamente en inglés / Seulement en anglais) Taxonomic Checklist of CITES listed Coral Species Part II CORAL SPECIES AND SYNONYMS CURRENTLY RECOGNIZED IN THE UNEP‐WCMC DATABASE 1. Scleractinia families Family Name Accepted Name Species Author Nomenclature Reference Synonyms ACROPORIDAE Acropora abrolhosensis Veron, 1985 Veron (2000) Madrepora crassa Milne Edwards & Haime, 1860; ACROPORIDAE Acropora abrotanoides (Lamarck, 1816) Veron (2000) Madrepora abrotanoides Lamarck, 1816; Acropora mangarevensis Vaughan, 1906 ACROPORIDAE Acropora aculeus (Dana, 1846) Veron (2000) Madrepora aculeus Dana, 1846 Madrepora acuminata Verrill, 1864; Madrepora diffusa ACROPORIDAE Acropora acuminata (Verrill, 1864) Veron (2000) Verrill, 1864; Acropora diffusa (Verrill, 1864); Madrepora nigra Brook, 1892 ACROPORIDAE Acropora akajimensis Veron, 1990 Veron (2000) Madrepora coronata Brook, 1892; Madrepora ACROPORIDAE Acropora anthocercis (Brook, 1893) Veron (2000) anthocercis Brook, 1893 ACROPORIDAE Acropora arabensis Hodgson & Carpenter, 1995 Veron (2000) Madrepora aspera Dana, 1846; Acropora cribripora (Dana, 1846); Madrepora cribripora Dana, 1846; Acropora manni (Quelch, 1886); Madrepora manni ACROPORIDAE Acropora aspera (Dana, 1846) Veron (2000) Quelch, 1886; Acropora hebes (Dana, 1846); Madrepora hebes Dana, 1846; Acropora yaeyamaensis Eguchi & Shirai, 1977 ACROPORIDAE Acropora austera (Dana, 1846) Veron (2000) Madrepora austera Dana, 1846 ACROPORIDAE Acropora awi Wallace & Wolstenholme, 1998 Veron (2000) ACROPORIDAE Acropora azurea Veron & Wallace, 1984 Veron (2000) ACROPORIDAE Acropora batunai Wallace, 1997 Veron (2000) ACROPORIDAE Acropora bifurcata Nemenzo, 1971 Veron (2000) ACROPORIDAE Acropora branchi Riegl, 1995 Veron (2000) Madrepora brueggemanni Brook, 1891; Isopora ACROPORIDAE Acropora brueggemanni (Brook, 1891) Veron (2000) brueggemanni (Brook, 1891) ACROPORIDAE Acropora bushyensis Veron & Wallace, 1984 Veron (2000) Acropora fasciculare Latypov, 1992 ACROPORIDAE Acropora cardenae Wells, 1985 Veron (2000) CoP16 Doc. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Prokaryotic Communities of Indo-Pacific Giant Barrel Sponges Are More Strongly Influenced by Geography Than Host Phylogeny
FEMS Microbiology Ecology, 94, 2018, fiy194 doi: 10.1093/femsec/fiy194 Advance Access Publication Date: 4 October 2018 Research Article RESEARCH ARTICLE Prokaryotic communities of Indo-Pacific giant barrel sponges are more strongly influenced by geography than host phylogeny TSwierts1,2,*, DFR Cleary3 and NJ de Voogd1,2 1Marine Biodiversity, Naturalis Biodiversity Center, PO Box 9517, 2300 RA, Leiden, the Netherlands, 2Institute of Environmental Sciences, Leiden University, PO Box 9518, 2300 RA, Leiden, the Netherlands and 3Departamento de Biologia CESAM, Centro de Estudos do Ambiente e do Mar, Universidade de Aveiro, Aveiro, Portugal ∗Corresponding author: Marine Biodiversity, Naturalis Biodiversity Center, PO Box 9517, 2300 RA, Leiden, the Netherlands. Tel: +31 (0)71 7519615. E-mail: [email protected] One sentence summary: The prokaryotic communities of multiple giant barrel sponge species in the Indo-Pacific are more strongly influenced by geography than host phylogeny. Editor: Julie Olson ABSTRACT Sponges harbor complex communities of microorganisms that carry out essential roles for the functioning and survival of their hosts. In some cases, genetically related sponges from different geographic regions share microbes, while in other cases microbial communities are more similar in unrelated sponges collected from the same location. To better understand how geography and host phylogeny cause variation in the prokaryotic community of sponges, we compared the prokaryotic community of 44 giant barrel sponges (Xestospongia spp.). These sponges belonged to six reproductively isolated genetic groups from eight areas throughout the Indo-Pacific region. Using Illumina sequencing, we obtained 440 000 sequences of the 16S rRNA gene V3V4 variable region that were assigned to 3795 operational taxonomic units (OTUs). -
Review of the Mineralogy of Calcifying Sponges
Dickinson College Dickinson Scholar Faculty and Staff Publications By Year Faculty and Staff Publications 12-2013 Not All Sponges Will Thrive in a High-CO2 Ocean: Review of the Mineralogy of Calcifying Sponges Abigail M. Smith Jade Berman Marcus M. Key, Jr. Dickinson College David J. Winter Follow this and additional works at: https://scholar.dickinson.edu/faculty_publications Part of the Paleontology Commons Recommended Citation Smith, Abigail M.; Berman, Jade; Key,, Marcus M. Jr.; and Winter, David J., "Not All Sponges Will Thrive in a High-CO2 Ocean: Review of the Mineralogy of Calcifying Sponges" (2013). Dickinson College Faculty Publications. Paper 338. https://scholar.dickinson.edu/faculty_publications/338 This article is brought to you for free and open access by Dickinson Scholar. It has been accepted for inclusion by an authorized administrator. For more information, please contact [email protected]. © 2013. Licensed under the Creative Commons http://creativecommons.org/licenses/by- nc-nd/4.0/ Elsevier Editorial System(tm) for Palaeogeography, Palaeoclimatology, Palaeoecology Manuscript Draft Manuscript Number: PALAEO7348R1 Title: Not all sponges will thrive in a high-CO2 ocean: Review of the mineralogy of calcifying sponges Article Type: Research Paper Keywords: sponges; Porifera; ocean acidification; calcite; aragonite; skeletal biomineralogy Corresponding Author: Dr. Abigail M Smith, PhD Corresponding Author's Institution: University of Otago First Author: Abigail M Smith, PhD Order of Authors: Abigail M Smith, PhD; Jade Berman, PhD; Marcus M Key Jr, PhD; David J Winter, PhD Abstract: Most marine sponges precipitate silicate skeletal elements, and it has been predicted that they would be among the few "winners" in an acidifying, high-CO2 ocean.