Targeting of Liver Mannan-Binding Lectin
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Molecular Markers of Serine Protease Evolution
The EMBO Journal Vol. 20 No. 12 pp. 3036±3045, 2001 Molecular markers of serine protease evolution Maxwell M.Krem and Enrico Di Cera1 ment and specialization of the catalytic architecture should correspond to signi®cant evolutionary transitions in the Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, Box 8231, St Louis, history of protease clans. Evolutionary markers encoun- MO 63110-1093, USA tered in the sequences contributing to the catalytic apparatus would thus give an account of the history of 1Corresponding author e-mail: [email protected] an enzyme family or clan and provide for comparative analysis with other families and clans. Therefore, the use The evolutionary history of serine proteases can be of sequence markers associated with active site structure accounted for by highly conserved amino acids that generates a model for protease evolution with broad form crucial structural and chemical elements of applicability and potential for extension to other classes of the catalytic apparatus. These residues display non- enzymes. random dichotomies in either amino acid choice or The ®rst report of a sequence marker associated with serine codon usage and serve as discrete markers for active site chemistry was the observation that both AGY tracking changes in the active site environment and and TCN codons were used to encode active site serines in supporting structures. These markers categorize a variety of enzyme families (Brenner, 1988). Since serine proteases of the chymotrypsin-like, subtilisin- AGY®TCN interconversion is an uncommon event, it like and a/b-hydrolase fold clans according to phylo- was reasoned that enzymes within the same family genetic lineages, and indicate the relative ages and utilizing different active site codons belonged to different order of appearance of those lineages. -
By Map44 Pathway Activation in a Manner Inhibitable Pattern
Co-Complexes of MASP-1 and MASP-2 Associated with the Soluble Pattern-Recognition Molecules Drive Lectin Pathway Activation in a Manner Inhibitable This information is current as by MAp44 of September 28, 2021. Søren E. Degn, Lisbeth Jensen, Tomasz Olszowski, Jens C. Jensenius and Steffen Thiel J Immunol 2013; 191:1334-1345; Prepublished online 19 June 2013; Downloaded from doi: 10.4049/jimmunol.1300780 http://www.jimmunol.org/content/191/3/1334 http://www.jimmunol.org/ Supplementary http://www.jimmunol.org/content/suppl/2013/06/19/jimmunol.130078 Material 0.DC1 References This article cites 43 articles, 23 of which you can access for free at: http://www.jimmunol.org/content/191/3/1334.full#ref-list-1 Why The JI? Submit online. by guest on September 28, 2021 • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists • Fast Publication! 4 weeks from acceptance to publication *average Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2013 by The American Association of Immunologists, Inc. All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. The Journal of Immunology Co-Complexes of MASP-1 and MASP-2 Associated with the Soluble Pattern-Recognition Molecules Drive Lectin Pathway Activation in a Manner Inhibitable by MAp44 Søren E. -
Ncounter Human Inflammation V2 Panel Gene List
nCounter Human Inflammation V2 Panel Gene List Official Symbol Accession Alias / Prev Symbol GO Annotation* Official Full Name Intrinsic To Plasma Membrane,Intrinsic To Membrane,Membrane Part,Membrane,Integral To Membrane,Integral To Plasma Membrane,Plasma Membrane Part,Plasma Membrane,Signal Transduction,Cell Surface Receptor Linked Signal Transduction Go 0007166,Defense Response,Inflammatory Response,Response To Stress,Response To External AGER NM_001136.3 RAGE Stimulus,Response To W advanced glycosylation end product-specific receptor Cytoplasmic Part,Membrane,Cytoplasm,Cytosol,Plasma Membrane,Regulation Of Biological Quality,Positive Regulation Of Cell Proliferation,Cell Development,Negative Regulation Of Apoptosis,Programmed Cell Death,Regulation Of Growth,Carboxylic Acid Metabolic ALOX12 NM_000697.1 12-LOX, 12S-LOX, LOG12 Process,Fatty Acid Oxidation,Negative Regulation Of Cellular Process,Regulation Of Cell arachidonate 12-lipoxygenase Defense Response,Inflammatory Response,Response To Stress,Response To External ALOX15 NM_001140.3 15-LOX-1, 15LOX-1 Stimulus,Response To Wounding,Oxidoreductase Activity arachidonate 15-lipoxygenase ALOX5 NM_000698.2 5-LO, 5-LOX, 5LPG, LOG5 Oxidoreductase Activity arachidonate 5-lipoxygenase Extracellular Region,Extracellular Region Part,Extracellular Space,Cell Cell Signaling,Cell AREG NM_001657.2 AR, CRDGF, SDGF Proliferation Go 0008283,Receptor Binding,Growth Factor Activity amphiregulin Cytoplasm,Carboxylic Acid Metabolic Process,Glutamine Family Amino Acid Metabolic Process,Amino Acid Metabolic -
Apolipoprotein(A) Secretion Is Modulated by Sortilin, Proprotein Convertase Subtilisin/Kexin Type 9, and Microsomal Triglyceride Transfer Protein
Western University Scholarship@Western Electronic Thesis and Dissertation Repository 6-24-2019 10:30 AM Apolipoprotein(a) Secretion is Modulated by Sortilin, Proprotein Convertase Subtilisin/Kexin Type 9, and Microsomal Triglyceride Transfer Protein Justin Clark The University of Western Ontario Supervisor Koschinsky, Marlys L. Robarts Research Institute Graduate Program in Physiology and Pharmacology A thesis submitted in partial fulfillment of the equirr ements for the degree in Master of Science © Justin Clark 2019 Follow this and additional works at: https://ir.lib.uwo.ca/etd Part of the Cardiovascular Diseases Commons Recommended Citation Clark, Justin, "Apolipoprotein(a) Secretion is Modulated by Sortilin, Proprotein Convertase Subtilisin/Kexin Type 9, and Microsomal Triglyceride Transfer Protein" (2019). Electronic Thesis and Dissertation Repository. 6310. https://ir.lib.uwo.ca/etd/6310 This Dissertation/Thesis is brought to you for free and open access by Scholarship@Western. It has been accepted for inclusion in Electronic Thesis and Dissertation Repository by an authorized administrator of Scholarship@Western. For more information, please contact [email protected]. Abstract Elevated plasma lipoprotein(a) (Lp(a)) levels are a causal risk factor for cardiovascular disease (CVD), but development of specific Lp(a) lowering therapeutics has been hindered by insufficient understanding of Lp(a) biology. For example, the location of the noncovalent interaction that precedes the extracellular disulfide linkage between apolipoprotein(a) (apo(a)) and apolipoprotein B-100 (apoB-100) in Lp(a) biosynthesis is unclear. In this study we modulated known intracellular regulators of apoB-100 production and then assessed apo(a) secretion from human HepG2 cells expressing 17-kringle (17K) apo(a) isoform variants using pulse-chase analysis. -
N-Glycosylation in the Protease Domain of Trypsin-Like Serine Proteases Mediates Calnexin-Assisted Protein Folding
RESEARCH ARTICLE N-glycosylation in the protease domain of trypsin-like serine proteases mediates calnexin-assisted protein folding Hao Wang1,2, Shuo Li1, Juejin Wang1†, Shenghan Chen1‡, Xue-Long Sun1,2,3,4, Qingyu Wu1,2,5* 1Molecular Cardiology, Cleveland Clinic, Cleveland, United States; 2Department of Chemistry, Cleveland State University, Cleveland, United States; 3Chemical and Biomedical Engineering, Cleveland State University, Cleveland, United States; 4Center for Gene Regulation of Health and Disease, Cleveland State University, Cleveland, United States; 5Cyrus Tang Hematology Center, State Key Laboratory of Radiation Medicine and Prevention, Soochow University, Suzhou, China Abstract Trypsin-like serine proteases are essential in physiological processes. Studies have shown that N-glycans are important for serine protease expression and secretion, but the underlying mechanisms are poorly understood. Here, we report a common mechanism of N-glycosylation in the protease domains of corin, enteropeptidase and prothrombin in calnexin- mediated glycoprotein folding and extracellular expression. This mechanism, which is independent *For correspondence: of calreticulin and operates in a domain-autonomous manner, involves two steps: direct calnexin [email protected] binding to target proteins and subsequent calnexin binding to monoglucosylated N-glycans. Elimination of N-glycosylation sites in the protease domains of corin, enteropeptidase and Present address: †Department prothrombin inhibits corin and enteropeptidase cell surface expression and prothrombin secretion of Physiology, Nanjing Medical in transfected HEK293 cells. Similarly, knocking down calnexin expression in cultured University, Nanjing, China; ‡Human Aging Research cardiomyocytes and hepatocytes reduced corin cell surface expression and prothrombin secretion, Institute, School of Life Sciences, respectively. Our results suggest that this may be a general mechanism in the trypsin-like serine Nanchang University, Nanchang, proteases with N-glycosylation sites in their protease domains. -
The Serine Protease Domain of MASP-3: Enzymatic Properties and Crystal Structure in Complex with Ecotin
The serine protease domain of MASP-3: enzymatic properties and crystal structure in complex with ecotin. Christine Gaboriaud, Rajesh Kumar Gupta, Lydie Martin, Monique Lacroix, Laurence Serre, Florence Teillet, Gérard J Arlaud, Véronique Rossi, Nicole Thielens To cite this version: Christine Gaboriaud, Rajesh Kumar Gupta, Lydie Martin, Monique Lacroix, Laurence Serre, et al.. The serine protease domain of MASP-3: enzymatic properties and crystal structure in complex with ecotin.. PLoS ONE, Public Library of Science, 2013, 8 (7), pp.e67962. 10.1371/journal.pone.0067962. inserm-00868926 HAL Id: inserm-00868926 https://www.hal.inserm.fr/inserm-00868926 Submitted on 2 Oct 2013 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. The Serine Protease Domain of MASP-3: Enzymatic Properties and Crystal Structure in Complex with Ecotin Christine Gaboriaud1,2,3*, Rajesh Kumar Gupta1,2,3¤a, Lydie Martin1,2,3, Monique Lacroix1,2,3, Laurence Serre3,1¤b, Florence Teillet1,2,3,Ge´rard J. Arlaud1,2,3,Ve´ronique Rossi1,2,3, Nicole M. Thielens1,2,3 1 Institut de Biologie Structurale (IBS), Direction des Sciences du Vivant, Commissariat a` l’Energie Atomique et aux Energies Alternatives, Grenoble, France, 2 IBS, Centre National de la Recherche Scientifique, Grenoble, France, 3 IBS, Universite´ Grenoble Alpes, Grenoble, France Abstract Mannan-binding lectin (MBL), ficolins and collectin-11 are known to associate with three homologous modular proteases, the MBL-Associated Serine Proteases (MASPs). -
On the Value of Therapeutic Interventions Targeting the Complement System in Acute Myocardial Infarction
UvA-DARE (Digital Academic Repository) The inflammatory response in myocarditis and acute myocardial infarction Emmens, R.W. Publication date 2016 Document Version Final published version Link to publication Citation for published version (APA): Emmens, R. W. (2016). The inflammatory response in myocarditis and acute myocardial infarction. General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:02 Oct 2021 Chapter 5 On the value of therapeutic interventions targeting the complement system in acute myocardial infarction Reindert Emmens, Diana Wouters, Sacha Zeerleder, Marieke van Ham, Hans Niessen, Paul Krijnen Submitted for publication 81 SUMMARY The complement system plays an important role in the inflammatory response subsequent to acute myocardial infarction (AMI), by actively increasing cell death of cardiomyocytes beyond the primary infarcted area. -
Proteolytic Cleavage—Mechanisms, Function
Review Cite This: Chem. Rev. 2018, 118, 1137−1168 pubs.acs.org/CR Proteolytic CleavageMechanisms, Function, and “Omic” Approaches for a Near-Ubiquitous Posttranslational Modification Theo Klein,†,⊥ Ulrich Eckhard,†,§ Antoine Dufour,†,¶ Nestor Solis,† and Christopher M. Overall*,†,‡ † ‡ Life Sciences Institute, Department of Oral Biological and Medical Sciences, and Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada ABSTRACT: Proteases enzymatically hydrolyze peptide bonds in substrate proteins, resulting in a widespread, irreversible posttranslational modification of the protein’s structure and biological function. Often regarded as a mere degradative mechanism in destruction of proteins or turnover in maintaining physiological homeostasis, recent research in the field of degradomics has led to the recognition of two main yet unexpected concepts. First, that targeted, limited proteolytic cleavage events by a wide repertoire of proteases are pivotal regulators of most, if not all, physiological and pathological processes. Second, an unexpected in vivo abundance of stable cleaved proteins revealed pervasive, functionally relevant protein processing in normal and diseased tissuefrom 40 to 70% of proteins also occur in vivo as distinct stable proteoforms with undocumented N- or C- termini, meaning these proteoforms are stable functional cleavage products, most with unknown functional implications. In this Review, we discuss the structural biology aspects and mechanisms -
Human Map44 HK359
Human MAp44 HK359 Edition 05-13 ELISA KIT PRODUCT INFORMATION & MANUAL Read carefully prior to starting procedures! For use in laboratory research only Not for clinical or diagnostic use Note that this user protocol is not lot-specific and is representative for the current specifications of this product. Please consult the vial label and the Certificate of Analysis for information on specific lots. Also note that shipping conditions may differ from storage conditions. For research use only. Not for use in or on humans or animals or for diagnostics. It is the responsibility of the user to comply with all local/state and federal rules in the use of this product. Hycult Biotech is not responsible for any patent infringements that might result from the use or derivation of this product. TABLE OF CONTENTS Page 1. Intended use ..................................................................................................................2 2. Introduction ....................................................................................................................2 3. Kit features ....................................................................................................................2 4. Protocol overview ..........................................................................................................3 5. Kit components and storage instructions .......................................................................4 Materials required but not provided 4 6. Warnings and precautions .............................................................................................5 -
PCSK9 Biology and Its Role in Atherothrombosis
International Journal of Molecular Sciences Review PCSK9 Biology and Its Role in Atherothrombosis Cristina Barale, Elena Melchionda, Alessandro Morotti and Isabella Russo * Department of Clinical and Biological Sciences, Turin University, I-10043 Orbassano, TO, Italy; [email protected] (C.B.); [email protected] (E.M.); [email protected] (A.M.) * Correspondence: [email protected]; Tel./Fax: +39-011-9026622 Abstract: It is now about 20 years since the first case of a gain-of-function mutation involving the as- yet-unknown actor in cholesterol homeostasis, proprotein convertase subtilisin/kexin type 9 (PCSK9), was described. It was soon clear that this protein would have been of huge scientific and clinical value as a therapeutic strategy for dyslipidemia and atherosclerosis-associated cardiovascular disease (CVD) management. Indeed, PCSK9 is a serine protease belonging to the proprotein convertase family, mainly produced by the liver, and essential for metabolism of LDL particles by inhibiting LDL receptor (LDLR) recirculation to the cell surface with the consequent upregulation of LDLR- dependent LDL-C levels. Beyond its effects on LDL metabolism, several studies revealed the existence of additional roles of PCSK9 in different stages of atherosclerosis, also for its ability to target other members of the LDLR family. PCSK9 from plasma and vascular cells can contribute to the development of atherosclerotic plaque and thrombosis by promoting platelet activation, leukocyte recruitment and clot formation, also through mechanisms not related to systemic lipid changes. These results further supported the value for the potential cardiovascular benefits of therapies based on PCSK9 inhibition. Actually, the passive immunization with anti-PCSK9 antibodies, evolocumab and alirocumab, is shown to be effective in dramatically reducing the LDL-C levels and attenuating CVD. -
Strategies of Targeting Alternative and Lectin Pathway Components in Complement- Mediated Diseases
REVIEW published: 08 August 2018 doi: 10.3389/fimmu.2018.01851 Be on Target: Strategies of Targeting Alternative and Lectin Pathway Components in Complement- Mediated Diseases József Dobó, Andrea Kocsis and Péter Gál* Institute of Enzymology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary The complement system has moved into the focus of drug development efforts in the last decade, since its inappropriate or uncontrolled activation has been recognized in many diseases. Some of them are primarily complement-mediated rare diseases, such as paroxysmal nocturnal hemoglobinuria, C3 glomerulonephritis, and atypical hemolytic uremic syndrome. Complement also plays a role in various multifactorial diseases that affect millions of people worldwide, such as ischemia reperfusion injury (myocardial infarction, stroke), age-related macular degeneration, and several neurodegenerative disorders. In this review, we summarize the potential advantages of targeting various Edited by: complement proteins with special emphasis on the components of the lectin (LP) and Nicole Thielens, UMR5075 Institut de Biologie the alternative pathways (AP). The serine proteases (MASP-1/2/3, factor D, factor B), Structurale (IBS), France which are responsible for the activation of the cascade, are straightforward targets of Reviewed by: inhibition, but the pattern recognition molecules (mannose-binding lectin, other collectins, Cordula M. Stover, and ficolins), the regulatory components (factor H, factor I, properdin), and C3 are also University of Leicester, United Kingdom subjects of drug development. Recent discoveries about cross-talks between the LP Maciej Cedzynski, and AP offer new approaches for clinical intervention. Mannan-binding lectin-associated Institute for Medical Biology (PAN), Poland serine proteases (MASPs) are not just responsible for LP activation, but they are also Christian Drouet, indispensable for efficient AP activation. -
Proprotein Convertase Subtilisin/Kexin Type 9: from the Discovery to the Development of New Therapies for Cardiovascular Diseases
Hindawi Publishing Corporation Scienti�ca Volume 2012, Article ID 927352, 21 pages http://dx.doi.org/10.6064/2012/927352 Review Article Proprotein Convertase Subtilisin/Kexin Type 9: From the Discovery to the Development of New Therapies for Cardiovascular Diseases Nicola Ferri Dipartimento di Scienze Farmacologiche e Biomolecolari, Università degli Studi di Milano, Via Balzaretti 9, 20133 Milano, Italy Correspondence should be addressed to Nicola Ferri; [email protected] Received 24 July 2012; Accepted 28 August 2012 Academic Editors: T.-S. Lee and T. Miyata Copyright © 2012 Nicola Ferri. is is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. e identi�cation of the HM�-CoA reductase inhibitors, statins, has represented a dramatic innovation of the pharmacological modulation of hypercholesterolemia and associated cardiovascular diseases. However, not all patients receiving statins achieve guideline-recommended low density lipoprotein (LDL) cholesterol goals, particularly those at high risk. ere remains, therefore, an unmet medical need to develop additional well-tolerated and effective agents to lower LDL cholesterol levels. e discovery of proprotein convertase subtilisin/kexin type 9 (PCSK9), a secretory protein that posttranscriptionally regulates levels of low density lipoprotein receptor (LDLR) by inducing its degradation, has opened a new era of pharmacological modulation