The Effect of Temperature Variation on the Growth of Leptolyngbya
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(Cyanobacterial Genera) 2014, Using a Polyphasic Approach
Preslia 86: 295–335, 2014 295 Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) 2014, using a polyphasic approach Taxonomické hodnocení cyanoprokaryot (cyanobakteriální rody) v roce 2014 podle polyfázického přístupu Jiří K o m á r e k1,2,JanKaštovský2, Jan M a r e š1,2 & Jeffrey R. J o h a n s e n2,3 1Institute of Botany, Academy of Sciences of the Czech Republic, Dukelská 135, CZ-37982 Třeboň, Czech Republic, e-mail: [email protected]; 2Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 31, CZ-370 05 České Budějovice, Czech Republic; 3Department of Biology, John Carroll University, University Heights, Cleveland, OH 44118, USA Komárek J., Kaštovský J., Mareš J. & Johansen J. R. (2014): Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) 2014, using a polyphasic approach. – Preslia 86: 295–335. The whole classification of cyanobacteria (species, genera, families, orders) has undergone exten- sive restructuring and revision in recent years with the advent of phylogenetic analyses based on molecular sequence data. Several recent revisionary and monographic works initiated a revision and it is anticipated there will be further changes in the future. However, with the completion of the monographic series on the Cyanobacteria in Süsswasserflora von Mitteleuropa, and the recent flurry of taxonomic papers describing new genera, it seems expedient that a summary of the modern taxonomic system for cyanobacteria should be published. In this review, we present the status of all currently used families of cyanobacteria, review the results of molecular taxonomic studies, descriptions and characteristics of new orders and new families and the elevation of a few subfamilies to family level. -
Leptolyngbyaceae, Synechococcales), a New Terrestrial Cyanobacterium Isolated from Mats Collected on Signy Island, South Orkney Islands, Antarctica
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by NERC Open Research Archive RESEARCH ARTICLE Nodosilinea signiensis sp. nov. (Leptolyngbyaceae, Synechococcales), a new terrestrial cyanobacterium isolated from mats collected on Signy Island, South Orkney Islands, Antarctica Ranina Radzi1, Narongrit Muangmai2, Paul Broady3, Wan Maznah Wan Omar1, 1 4 1 a1111111111 Sebastien Lavoue , Peter Convey , Faradina MericanID * a1111111111 a1111111111 1 School of Biological Sciences, Universiti Sains Malaysia, Minden, Penang, Malaysia, 2 Department of Fishery Biology, Faculty of Fisheries, Kasetsart University, Chatuchak, Bangkok, Thailand, 3 School of a1111111111 Biological Sciences, University of Canterbury, Christchurch, New Zealand, 4 British Antarctic Survey, a1111111111 Cambridge, United Kingdom * [email protected] OPEN ACCESS Abstract Citation: Radzi R, Muangmai N, Broady P, Wan Omar WM, Lavoue S, Convey P, et al. (2019) Terrestrial cyanobacteria are very diverse and widely distributed in Antarctica, where they Nodosilinea signiensis sp. nov. (Leptolyngbyaceae, can form macroscopically visible biofilms on the surfaces of soils and rocks, and on benthic Synechococcales), a new terrestrial surfaces in fresh waters. We recently isolated several terrestrial cyanobacteria from soils cyanobacterium isolated from mats collected on Signy Island, South Orkney Islands, Antarctica. collected on Signy Island, South Orkney Islands, Antarctica. Among them, we found a novel PLoS ONE 14(11): e0224395. https://doi.org/ species of Nodosilinea, named here as Nodosilinea signiensis sp. nov. This new species is 10.1371/journal.pone.0224395 morphologically and genetically distinct from other described species. Morphological exami- Editor: Susanna A. Wood, Cawthron Institute, NEW nation indicated that the new species is differentiated from others in the genus by cell size, ZEALAND cell shape, filament attenuation, sheath morphology and granulation. -
Cyanobacteria) Through Recognition of Four Families Including Oculatellaceae Fam
John Carroll University Carroll Collected Masters Theses Theses, Essays, and Senior Honors Projects Winter 2016 REVISION OF THE SYNECHOCOCCALES (CYANOBACTERIA) THROUGH RECOGNITION OF FOUR FAMILIES INCLUDING OCULATELLACEAE FAM. NOV. AND TRICHOCOLEACEAE FAM NOV. AND SEVEN NEW GENERA ONTC AINING 14 SPECIES Truc Mai John Carroll University, [email protected] Follow this and additional works at: http://collected.jcu.edu/masterstheses Part of the Biology Commons Recommended Citation Mai, Truc, "REVISION OF THE SYNECHOCOCCALES (CYANOBACTERIA) THROUGH RECOGNITION OF FOUR FAMILIES INCLUDING OCULATELLACEAE FAM. NOV. AND TRICHOCOLEACEAE FAM NOV. AND SEVEN NEW GENERA ONC TAINING 14 SPECIES" (2016). Masters Theses. 23. http://collected.jcu.edu/masterstheses/23 This Thesis is brought to you for free and open access by the Theses, Essays, and Senior Honors Projects at Carroll Collected. It has been accepted for inclusion in Masters Theses by an authorized administrator of Carroll Collected. For more information, please contact [email protected]. REVISION OF THE SYNECHOCOCCALES (CYANOBACTERIA) THROUGH RECOGNITION OF FOUR FAMILIES INCLUDING OCULATELLACEAE FAM. NOV. AND TRICHOCOLEACEAE FAM NOV. AND SEVEN NEW GENERA CONTAINING 14 SPECIES A Thesis Submitted to The Graduate School of John Carroll University in Partial Fulfillment of the Requirements for the Degree of Master of Science By Truc T. Mai 2016 ACKNOWLEDGEMENTS My appreciation would go first and foremost to Dr. Jeffrey R. Johansen and Dr. Nicole Pietrasiak for providing such wonderful care and guidance both in research and in life, so much as I look to them and their families as my own. My special gratitude also goes to Dr. Chris Sheil and Dr. Michael P. -
A New Cyanobacterium from the Everglades, Florida – Chamaethrix Gen
Fottea, Olomouc, 17(2): 269–276, 2017 269 DOI: 10.5507/fot.2017.017 A new cyanobacterium from the Everglades, Florida – Chamaethrix gen. nov. Petr Dvořák*1, Petr Hašler1, Petra Pitelková2, Petra tabáková1, Dale A. CASAMATTA3 & Aloisie Poulíčková1 1 Department of Botany, Faculty of Science, Palacký University Olomouc, Šlechtitelů 27, CZ–783 71 Olomouc, Czech Republic; *Corresponding author e–mail: [email protected] 2 Department of Biology, Faculty of Science, University of Hradec Králové, Hradec Králové, Czech Republic 3 Department of Biology, University of North Florida, 1 UNF Drive, Jacksonville, Florida, FL 32224, USA Abstract: Cyanobacteria are cosmopolitan group of phototrophic microbes with significant contributions to global primary production. However, their biodiversity, especially in tropical areas, is still largely unexplored. In this paper, we used a combination of molecular and morphological data to characterize a filamentous cyanobacterium isolated from a soil crust in the Everglades National Park in Florida. It is morphologically similar to the ubiquitous, polyphyletic Leptolyngbya, but phylogenetic analysis of the 16S rRNA gene and secondary structures of the 16S–23S ITS region revealed that our isolates form a monophyletic clade unrelated to Leptolyngbya sensu stricto. Apart from its phylogenetic position, we found that the strain possesses a unique combination of morphological and molecular characters, which have not been found in any other Leptolyngbya species. Due to these characteristics, together with its subtropical origin, we erect new monospecific genus Chamaethrix. Key words: Leptolygbya, new genus, phylogeny, soil crust, subtropical region, taxonomy INTRODUCTION 2007). Recent acknowledgement of this hole in our knowledge of tropical and subtropical taxa has been recognized (Hašler et al. -
Revision of the Synechococcales (Cyanobacteria) Through Recognition of Four Families Including Oculatellaceae Fam
Phytotaxa 365 (1): 001–059 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2018 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.365.1.1 Revision of the Synechococcales (Cyanobacteria) through recognition of four families including Oculatellaceae fam. nov. and Trichocoleaceae fam. nov. and six new genera containing 14 species TRUC MAI1, 3*, JEFFREY R. JOHANSEN1,2, NICOLE PIETRASIAK3, MARKÉTA BOHUNICKÁ4, & MICHAEL P. MARTIN1 1Department of Biology, John Carroll University, 1 John Carroll Blvd., University Heights, Ohio 44118, USA 2Department of Botany, Faculty of Science, University of South Bohemia, 31 Branišovská, 37005 České Budějovice, Czech Republic 3Department of Plant and Environmental Sciences, New Mexico State University, Skeen Hall Room N127, P.O Box 30003 MSC 3Q, Las Cruces, New Mexico 88003, USA. 4Department of Biology, Faculty of Science, University of Hradec Králové, Rokitanského 62, 500 03 Hradec Králové, Czech Republic *Corresponding author ([email protected]) Abstract A total of 48 strains of thin, filamentous cyanobacteria in Synechococcales were studied by sequencing 16S rRNA and rpoC1 sequence fragments. We also carefully characterized a subset of these by morphology. Phylogenetic analysis of the 16S rRNA gene data using Bayesian inference of a large Synechococcales alignment (345 OTU’s) was in agreement with the phylogeny based on the rpoC1 gene for 59 OTU’s. Both indicated that the large family-level grouping formerly classified as the Leptolyngbyaceae could be further divided into four family-level clades. Two of these family-level clades have been recognized previously as Leptolyngbyaceae and Prochlorotrichaceae. Oculatellaceae fam. -
Phyllonema Aviceniicola Gen. Nov., Sp. Nov. and Foliisarcina Bertiogensis Gen
International Journal of Systematic and Evolutionary Microbiology (2016), 66, 689–700 DOI 10.1099/ijsem.0.000774 Phyllonema aviceniicola gen. nov., sp. nov. and Foliisarcina bertiogensis gen. nov., sp. nov., epiphyllic cyanobacteria associated with Avicennia schaueriana leaves Danillo Oliveira Alvarenga,1 Janaina Rigonato,1 Luis Henrique Zanini Branco,2 Itamar Soares Melo3 and Marli Fatima Fiore1 Correspondence 1University of Sa˜o Paulo, Center for Nuclear Energy in Agriculture, Avenida Centena´rio 303, Marli Fatima Fiore 13400-970 Piracicaba, SP, Brazil fi[email protected] 2Sa˜o Paulo State University, Institute of Bioscience, Languages and Exact Sciences, 15054-000 Sa˜o Jose´ do Rio Preto, SP, Brazil 3Embrapa Environment, Laboratory of Environmental Microbiology, 13820-000 Jaguariu´na, SP, Brazil Cyanobacteria dwelling on the salt-excreting leaves of the mangrove tree Avicennia schaueriana were isolated and characterized by ecological, morphological and genetic approaches. Leaves were collected in a mangrove with a history of oil contamination on the coastline of Sa˜o Paulo state, Brazil, and isolation was achieved by smearing leaves on the surface of solid media or by submerging leaves in liquid media. Twenty-nine isolated strains were shown to belong to five cyanobacterial orders (thirteen to Synechococcales, seven to Nostocales, seven to Pleurocapsales, one to Chroococcales, and one to Oscillatoriales) according to morphological and 16S rRNA gene sequence evaluations. More detailed investigations pointed six Rivulariacean and four Xenococcacean strains as novel taxa. These strains were classified as Phyllonema gen. nov. (type species Phyllonema aviceniicola sp. nov. with type strain CENA341T) and Foliisarcina gen. nov. (type species Foliisarcina bertiogensis sp. nov.