Five New Records of Smut Fungi (Ustilaginomycotina)
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Why Mushrooms Have Evolved to Be So Promiscuous: Insights from Evolutionary and Ecological Patterns
fungal biology reviews 29 (2015) 167e178 journal homepage: www.elsevier.com/locate/fbr Review Why mushrooms have evolved to be so promiscuous: Insights from evolutionary and ecological patterns Timothy Y. JAMES* Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA article info abstract Article history: Agaricomycetes, the mushrooms, are considered to have a promiscuous mating system, Received 27 May 2015 because most populations have a large number of mating types. This diversity of mating Received in revised form types ensures a high outcrossing efficiency, the probability of encountering a compatible 17 October 2015 mate when mating at random, because nearly every homokaryotic genotype is compatible Accepted 23 October 2015 with every other. Here I summarize the data from mating type surveys and genetic analysis of mating type loci and ask what evolutionary and ecological factors have promoted pro- Keywords: miscuity. Outcrossing efficiency is equally high in both bipolar and tetrapolar species Genomic conflict with a median value of 0.967 in Agaricomycetes. The sessile nature of the homokaryotic Homeodomain mycelium coupled with frequent long distance dispersal could account for selection favor- Outbreeding potential ing a high outcrossing efficiency as opportunities for choosing mates may be minimal. Pheromone receptor Consistent with a role of mating type in mediating cytoplasmic-nuclear genomic conflict, Agaricomycetes have evolved away from a haploid yeast phase towards hyphal fusions that display reciprocal nuclear migration after mating rather than cytoplasmic fusion. Importantly, the evolution of this mating behavior is precisely timed with the onset of diversification of mating type alleles at the pheromone/receptor mating type loci that are known to control reciprocal nuclear migration during mating. -
The Ustilaginales (Smut Fungi) of Ohio*
THE USTILAGINALES (SMUT FUNGI) OF OHIO* C. W. ELLETT Department of Botany and Plant Pathology, The Ohio State University, Columbus 10 The smut fungi are in the order Ustilaginales with one family, the Ustilaginaceae, recognized. They are all plant parasites. In recent monographs 276 species in 22 genera are reported in North America and more than 1000 species have been reported from the world (Fischer, 1953; Zundel, 1953; Fischer and Holton, 1957). More than one half of the known smut fungi are pathogens of species in the Gramineae. Most of the smut fungi are recognized by the black or brown spore masses or sori forming in the inflorescences, the leaves, or the stems of their hosts. The sori may involve the entire inflorescence as Ustilago nuda on Hordeum vulgare (fig. 2) and U. residua on Danthonia spicata (fig. 7). Tilletia foetida, the cause of bunt of wheat in Ohio, sporulates in the ovularies only and Ustilago violacea which has been found in Ohio on Silene sp. forms spores only in the anthers of its host. The sori of Schizonella melanogramma on Carex (fig. 5) and of Urocystis anemones on Hepatica (fig. 4) are found in leaves. Ustilago striiformis (fig. 6) which causes stripe smut of many grasses has sori which are mostly in the leaves. Ustilago parlatorei, found in Ohio on Rumex (fig. 3), forms sori in stems, and in petioles and midveins of the leaves. In a few smut fungi the spore masses are not conspicuous but remain buried in the host tissues. Most of the species in the genera Entyloma and Doassansia are of this type. -
<I>Tilletia Indica</I>
ISPM 27 27 ANNEX 4 ENG DP 4: Tilletia indica Mitra INTERNATIONAL STANDARD FOR PHYTOSANITARY MEASURES PHYTOSANITARY FOR STANDARD INTERNATIONAL DIAGNOSTIC PROTOCOLS Produced by the Secretariat of the International Plant Protection Convention (IPPC) This page is intentionally left blank This diagnostic protocol was adopted by the Standards Committee on behalf of the Commission on Phytosanitary Measures in January 2014. The annex is a prescriptive part of ISPM 27. ISPM 27 Diagnostic protocols for regulated pests DP 4: Tilletia indica Mitra Adopted 2014; published 2016 CONTENTS 1. Pest Information ............................................................................................................................... 2 2. Taxonomic Information .................................................................................................................... 2 3. Detection ........................................................................................................................................... 2 3.1 Examination of seeds/grain ............................................................................................... 3 3.2 Extraction of teliospores from seeds/grain, size-selective sieve wash test ....................... 3 4. Identification ..................................................................................................................................... 4 4.1 Morphology of teliospores ................................................................................................ 4 4.1.1 Morphological -
Fungal Planet Description Sheets: 716–784 By: P.W
Fungal Planet description sheets: 716–784 By: P.W. Crous, M.J. Wingfield, T.I. Burgess, G.E.St.J. Hardy, J. Gené, J. Guarro, I.G. Baseia, D. García, L.F.P. Gusmão, C.M. Souza-Motta, R. Thangavel, S. Adamčík, A. Barili, C.W. Barnes, J.D.P. Bezerra, J.J. Bordallo, J.F. Cano-Lira, R.J.V. de Oliveira, E. Ercole, V. Hubka, I. Iturrieta-González, A. Kubátová, M.P. Martín, P.-A. Moreau, A. Morte, M.E. Ordoñez, A. Rodríguez, A.M. Stchigel, A. Vizzini, J. Abdollahzadeh, V.P. Abreu, K. Adamčíková, G.M.R. Albuquerque, A.V. Alexandrova, E. Álvarez Duarte, C. Armstrong-Cho, S. Banniza, R.N. Barbosa, J.-M. Bellanger, J.L. Bezerra, T.S. Cabral, M. Caboň, E. Caicedo, T. Cantillo, A.J. Carnegie, L.T. Carmo, R.F. Castañeda-Ruiz, C.R. Clement, A. Čmoková, L.B. Conceição, R.H.S.F. Cruz, U. Damm, B.D.B. da Silva, G.A. da Silva, R.M.F. da Silva, A.L.C.M. de A. Santiago, L.F. de Oliveira, C.A.F. de Souza, F. Déniel, B. Dima, G. Dong, J. Edwards, C.R. Félix, J. Fournier, T.B. Gibertoni, K. Hosaka, T. Iturriaga, M. Jadan, J.-L. Jany, Ž. Jurjević, M. Kolařík, I. Kušan, M.F. Landell, T.R. Leite Cordeiro, D.X. Lima, M. Loizides, S. Luo, A.R. Machado, H. Madrid, O.M.C. Magalhães, P. Marinho, N. Matočec, A. Mešić, A.N. Miller, O.V. Morozova, R.P. Neves, K. Nonaka, A. Nováková, N.H. -
Molecular Phylogeny of Ustilago and Sporisorium Species (Basidiomycota, Ustilaginales) Based on Internal Transcribed Spacer (ITS) Sequences1
Color profile: Disabled Composite Default screen 976 Molecular phylogeny of Ustilago and Sporisorium species (Basidiomycota, Ustilaginales) based on internal transcribed spacer (ITS) sequences1 Matthias Stoll, Meike Piepenbring, Dominik Begerow, Franz Oberwinkler Abstract: DNA sequence data from the internal transcribed spacer (ITS) region of the nuclear rDNA genes were used to determine a phylogenetic relationship between the graminicolous smut genera Ustilago and Sporisorium (Ustilaginales). Fifty-three members of both genera were analysed together with three related outgroup genera. Neighbor-joining and Bayesian inferences of phylogeny indicate the monophyly of a bipartite genus Sporisorium and the monophyly of a core Ustilago clade. Both methods confirm the recently published nomenclatural change of the cane smut Ustilago scitaminea to Sporisorium scitamineum and indicate a putative connection between Ustilago maydis and Sporisorium. Overall, the three clades resolved in our analyses are only weakly supported by morphological char- acters. Still, their preferences to parasitize certain subfamilies of Poaceae could be used to corroborate our results: all members of both Sporisorium groups occur exclusively on the grass subfamily Panicoideae. The core Ustilago group mainly infects the subfamilies Pooideae or Chloridoideae. Key words: basidiomycete systematics, ITS, molecular phylogeny, Bayesian analysis, Ustilaginomycetes, smut fungi. Résumé : Afin de déterminer la relation phylogénétique des genres Ustilago et Sporisorium (Ustilaginales), responsa- bles du charbon chez les graminées, les auteurs ont utilisé les données de séquence de la région espaceur transcrit interne (ITS) des gènes nucléiques ADNr. Ils ont analysé 53 membres de ces genres, ainsi que trois genres apparentés. Les liens avec les voisins et l’inférence bayésienne de la phylogénie indiquent la monophylie d’un genre Sporisorium bipartite et la monophylie d’un clade Ustilago central. -
Use of Whole Genome Sequence Data to Characterize Mating and Rna
USE OF WHOLE GENOME SEQUENCE DATA TO CHARACTERIZE MATING AND RNA SILENCING GENES IN TILLETIA SPECIES By SEAN WESLEY MCCOTTER A thesis submitted in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE IN PLANT PATHOLOGY WASHINGTON STATE UNIVERSITY Department of Plant Pathology DECEMBER 2014 © Copyright by SEAN WESLEY MCCOTTER, 2014 All Rights Reserved © Copyright by SEAN WESLEY MCCOTTER, 2014 All Rights Reserved To the Faculty of Washington State University: The members of the Committee appointed to examine the thesis of SEAN WESLEY MCCOTTER find it satisfactory and recommend that it be accepted. Lori M. Carris, Ph.D., Chair Dorrie Main, Ph.D. Patricia Okubara, Ph.D. Lisa A. Castlebury, Ph. D. ii ACKNOWLEDGMENTS The research presented in this thesis could not have been carried out without the expertise and cooperation of others in the scientific community. Significant contributions were made by colleagues here at Washington State University, at the United States Department of Agriculture and at Agriculture and Agri-Food Canada. I would like to start by thanking my committee members Dr. Lori Carris, Dr. Lisa Castlebury, Dr. Pat Okubara and Dr. Dorrie Main, who provided guidance on procedure, feedback on my research as well as contacts and laboratory resources. Dr. André Lévesque of AAFC initially alerted me to the prospect of collaboration with other AAFC Tilletia researchers and placed me in contact with Dr. Sarah Hambleton, whose lab sequenced four out of five strains of Tilletia used in this study (CSSP CRTI 09-462RD). Dr. Prasad Kesanakurti and Jeff Cullis coordinated my access to AAFC’s genome and transcriptome data for these species. -
<I>Ustilago-Sporisorium-Macalpinomyces</I>
Persoonia 29, 2012: 55–62 www.ingentaconnect.com/content/nhn/pimj REVIEW ARTICLE http://dx.doi.org/10.3767/003158512X660283 A review of the Ustilago-Sporisorium-Macalpinomyces complex A.R. McTaggart1,2,3,5, R.G. Shivas1,2, A.D.W. Geering1,2,5, K. Vánky4, T. Scharaschkin1,3 Key words Abstract The fungal genera Ustilago, Sporisorium and Macalpinomyces represent an unresolved complex. Taxa within the complex often possess characters that occur in more than one genus, creating uncertainty for species smut fungi placement. Previous studies have indicated that the genera cannot be separated based on morphology alone. systematics Here we chronologically review the history of the Ustilago-Sporisorium-Macalpinomyces complex, argue for its Ustilaginaceae resolution and suggest methods to accomplish a stable taxonomy. A combined molecular and morphological ap- proach is required to identify synapomorphic characters that underpin a new classification. Ustilago, Sporisorium and Macalpinomyces require explicit re-description and new genera, based on monophyletic groups, are needed to accommodate taxa that no longer fit the emended descriptions. A resolved classification will end the taxonomic confusion that surrounds generic placement of these smut fungi. Article info Received: 18 May 2012; Accepted: 3 October 2012; Published: 27 November 2012. INTRODUCTION TAXONOMIC HISTORY Three genera of smut fungi (Ustilaginomycotina), Ustilago, Ustilago Spo ri sorium and Macalpinomyces, contain about 540 described Ustilago, derived from the Latin ustilare (to burn), was named species (Vánky 2011b). These three genera belong to the by Persoon (1801) for the blackened appearance of the inflores- family Ustilaginaceae, which mostly infect grasses (Begerow cence in infected plants, as seen in the type species U. -
Fungi Fundamentals What Is Biology? What Is Life? Seven Common Components to All Life Forms
Fungi Fundamentals What is Biology? What is life? Seven common components to all life forms. What are fungi? How do fungi compare to other organisms on the tree of life? What are fungi? • Eukaryotic What are fungi? • Eukaryotic • Multicellular / Filamentous What are fungi? • Eukaryotic • Multicellular / Filamentous • Heterotrophic What are fungi? • Eukaryotic • Multicellular / Filamentous • Heterotrophic • Sessile/non-motile = “Vegetative” What are fungi? • Eukaryotic • Multicellular / Filamentous • Heterotrophic • Sessile/non-motile = “Vegetative” • Reproduce via spores (sexual & asexual) Kingdom Fungi • Eukaryotic • Multicellular / Filamentous • Heterotrophic • Sessile/non-motile = “Vegetative” • Reproduce via spores (sexual & asexual) Kingdom Fungi • Eukaryotic • Multicellular / Filamentous • Heterotrophic hyphae • Sessile/non-motile = “Vegetative” • Reproduce via spores (sexual & asexual) mycelium Kingdom Fungi Symbiotic Fungi • Eukaryotic • Multicellular / Filamentous • Heterotrophic • Sessile/non-motile = “Vegetative” • Reproduce via spores (sexual & asexual) Mycorrhizal mutualists Parasitic / Pathogenic Fungi Decay fungi “saprotrophic” Mycology: Laboratory Homework Fungi Are Everywhere! - Expose Malt Extract Agar Petri dishes to the environment of your home. Overnight. Anywhere you want. - Label plate and seal with parafilm. - Wait 3 days. - Record what grows on days 4-6. Bring back next week! Mycology: Laboratory Homework Fungi Are Everywhere! - Expose Malt Extract Agar Petri dishes to the environment of your home. Overnight. Anywhere you want. - Label plate and seal with parafilm. - Wait 3 days. - Record what grows on days 4-6. Bring back next week! Mycology: Laboratory Homework Growing Mushrooms! - Buy some mushrooms from the grocery store and bring them in next week so we can start growing them. Biological Diversity Species concepts Morphological species concept: species can be differentiated from each other by physical features. Not all mushrooms are alike. -
A Silver Bullet in a Golden Age of Functional Genomics: the Impact of Agrobacterium-Mediated Transformation of Fungi
Idnurm et al. Fungal Biol Biotechnol (2017) 4:6 DOI 10.1186/s40694-017-0035-0 Fungal Biology and Biotechnology REVIEW Open Access A silver bullet in a golden age of functional genomics: the impact of Agrobacterium‑mediated transformation of fungi Alexander Idnurm1* , Andy M. Bailey2, Timothy C. Cairns3, Candace E. Elliott1, Gary D. Foster2, Giuseppe Ianiri4 and Junhyun Jeon5 Abstract The implementation of Agrobacterium tumefaciens as a transformation tool revolutionized approaches to discover and understand gene functions in a large number of fungal species. A. tumefaciens mediated transformation (AtMT) is one of the most transformative technologies for research on fungi developed in the last 20 years, a development arguably only surpassed by the impact of genomics. AtMT has been widely applied in forward genetics, whereby generation of strain libraries using random T-DNA insertional mutagenesis, combined with phenotypic screening, has enabled the genetic basis of many processes to be elucidated. Alternatively, AtMT has been fundamental for reverse genet- ics, where mutant isolates are generated with targeted gene deletions or disruptions, enabling gene functional roles to be determined. When combined with concomitant advances in genomics, both forward and reverse approaches using AtMT have enabled complex fungal phenotypes to be dissected at the molecular and genetic level. Addition- ally, in several cases AtMT has paved the way for the development of new species to act as models for specifc areas of fungal biology, particularly in plant pathogenic ascomycetes and in a number of basidiomycete species. Despite its impact, the implementation of AtMT has been uneven in the fungi. This review provides insight into the dynamics of expansion of new research tools into a large research community and across multiple organisms. -
Low Temperature During Infection Limits Ustilago Bullata (Ustilaginaceae, Ustilaginales) Disease Incidence on Bromus Tectorum (Poaceae, Cyperales)
Biocontrol Science and Technology, 2007; 17(1): 33Á52 Low temperature during infection limits Ustilago bullata (Ustilaginaceae, Ustilaginales) disease incidence on Bromus tectorum (Poaceae, Cyperales) TOUPTA BOGUENA1, SUSAN E. MEYER2, & DAVID L. NELSON2 1Department of Integrative Biology, Brigham Young University, Provo, UT, USA, and 2USDA Forest Service, Rocky Mountain Research Station, Shrub Sciences Laboratory, Provo, UT, USA (Received 18 January 2006; returned 7 March 2006; accepted 4 April 2006) Abstract Ustilago bullata is frequently encountered on the exotic winter annual grass Bromus tectorum in western North America. To evaluate the biocontrol potential of this seedling-infecting pathogen, we examined the effect of temperature on the infection process. Teliospore germination rate increased linearly with temperature from 2.5 to 258C, with significant among-population differences. It generally matched or exceeded host seed germination rate over the range 10Á258C, but lagged behind at lower temperatures. Inoculation trials demonstrated that the pathogen can achieve high disease incidence when temperatures during infection range 20Á308C. Disease incidence was drastically reduced at 2.58C. Pathogen populations differed in their ability to infect at different temperatures, but none could infect in the cold. This may limit the use of this organism for biocontrol of B. tectorum to habitats with reliable autumn seedling emergence, because cold temperatures are likely to limit infection of later-emerging seedling cohorts. Keywords: Bromus tectorum, cheatgrass, downy brome, head smut, infection window, Ustilago bullata, weed biocontrol Introduction Bromus tectorum L. (downy brome, cheatgrass; Poaceae, Cyperales) is a serious and difficult-to-control weed of winter cereal grains in western North America (Peeper 1984) and is even more important as a weed of wildlands in this region (D’Antonio & Vitousek 1992). -
GISP Prevention and Management of Invasive Alien Species
GISP Global Invasive Species Programme Ministry of Tourism, Environment United States Government and Natural Resources Republic of Zambia Prevention and Management of Invasive Alien Species Proceedings of a Workshop on Forging Cooperation throughout Southern Africa 10-12 June 2002 Lusaka, Zambia Edited by Ian A.W. Macdonald, Jamie K. Reaser, Chris Bright, Laurie E. Neville, Geoffrey W. Howard, Sean T. Murphy, and Guy Preston This report is a product of a workshop entitled Prevention and Management of Invasive Alien Species: Forging Cooperation throughout Southern Africa, held by the Global Invasive Species Programme (GISP) in Lusaka, Zambia on 10-12 June 2002. It was sponsored by the U.S. Department of State, Bureau of Oceans and International Environmental Affairs (OESI). In-kind assistance was provided by the U.S. Environmental Protection Agency. Administrative and logistical assistance was provided by IUCN Zambia, the Scientific Committee on Problems of the Environment (SCOPE), and the U.S. National Fish and Wildlife Foundation (NFWF), as well as all Steering Committee members. The Smithsonian Institution National Museum of Natural History and National Botanical Institute, South Africa kindly provided support during report production. The editors thank Dr Phoebe Barnard of the GISP Secretariat for very extensive work to finalize the report. The workshop was co-chaired by the Governments of the Republic of Zambia and the United States of America, and by the Global Invasive Species Programme. Members of the Steering Committee included: Mr Lubinda Aongola (Ministry of Tourism, Environment and Natural Resources, Zambia), Mr Troy Fitrell (U.S. Embassy - Lusaka, Zambia), Mr Geoffrey W. Howard (GISP Executive Board, IUCN Regional Office for Eastern Africa), Ms Eileen Imbwae (Permanent Secretary, Ministry of Tourism, Environment and Natural Resources, Zambia), Mr Mario Merida (U.S. -
Sites of Importance for Nature Conservation Wales Guidance (Pdf)
Wildlife Sites Guidance Wales A Guide to Develop Local Wildlife Systems in Wales Wildlife Sites Guidance Wales A Guide to Develop Local Wildlife Systems in Wales Foreword The Welsh Assembly Government’s Environment Strategy for Wales, published in May 2006, pays tribute to the intrinsic value of biodiversity – ‘the variety of life on earth’. The Strategy acknowledges the role biodiversity plays, not only in many natural processes, but also in the direct and indirect economic, social, aesthetic, cultural and spiritual benefits that we derive from it. The Strategy also acknowledges that pressures brought about by our own actions and by other factors, such as climate change, have resulted in damage to the biodiversity of Wales and calls for a halt to this loss and for the implementation of measures to bring about a recovery. Local Wildlife Sites provide essential support between and around our internationally and nationally designated nature sites and thus aid our efforts to build a more resilient network for nature in Wales. The Wildlife Sites Guidance derives from the shared knowledge and experience of people and organisations throughout Wales and beyond and provides a common point of reference for the most effective selection of Local Wildlife Sites. I am grateful to the Wales Biodiversity Partnership for developing the Wildlife Sites Guidance. The contribution and co-operation of organisations and individuals across Wales are vital to achieving our biodiversity targets. I hope that you will find the Wildlife Sites Guidance a useful tool in the battle against biodiversity loss and that you will ensure that it is used to its full potential in order to derive maximum benefit for the vitally important and valuable nature in Wales.