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Polypodiophyta): a Global Assessment of Traits Associated with Invasiveness and Their Distribution and Status in South Africa
Terrestrial alien ferns (Polypodiophyta): A global assessment of traits associated with invasiveness and their distribution and status in South Africa By Emily Joy Jones Submitted in fulfilment of the requirements for the degree Master of Science in the Faculty of Science at the Nelson Mandela University April 2019 Supervisor: Dr Tineke Kraaij Co-Supervisor: Dr Desika Moodley Declaration I, Emily Joy Jones (216016479), hereby indicate that the dissertation for Master of Science in the Faculty of Science is my own work and that it has not previously been submitted for assessment or completion of any postgraduate qualification to another University or for another qualification. _______________________ 2019-03-11 Emily Joy Jones DATE Official use: In accordance with Rule G4.6.3, 4.6.3 A treatise/dissertation/thesis must be accompanied by a written declaration on the part of the candidate to the effect that it is his/her own work and that it has not previously been submitted for assessment to another University or for another qualification. However, material from publications by the candidate may be embodied in a treatise/dissertation/thesis. i Table of Contents Abstract ...................................................................................................................................... i Acknowledgements ................................................................................................................ iii List of Tables ........................................................................................................................... -
National Wetland Plant List: 2016 Wetland Ratings
Lichvar, R.W., D.L. Banks, W.N. Kirchner, and N.C. Melvin. 2016. The National Wetland Plant List: 2016 wetland ratings. Phytoneuron 2016-30: 1–17. Published 28 April 2016. ISSN 2153 733X THE NATIONAL WETLAND PLANT LIST: 2016 WETLAND RATINGS ROBERT W. LICHVAR U.S. Army Engineer Research and Development Center Cold Regions Research and Engineering Laboratory 72 Lyme Road Hanover, New Hampshire 03755-1290 DARIN L. BANKS U.S. Environmental Protection Agency, Region 7 Watershed Support, Wetland and Stream Protection Section 11201 Renner Boulevard Lenexa, Kansas 66219 WILLIAM N. KIRCHNER U.S. Fish and Wildlife Service, Region 1 911 NE 11 th Avenue Portland, Oregon 97232 NORMAN C. MELVIN USDA Natural Resources Conservation Service Central National Technology Support Center 501 W. Felix Street, Bldg. 23 Fort Worth, Texas 76115-3404 ABSTRACT The U.S. Army Corps of Engineers (Corps) administers the National Wetland Plant List (NWPL) for the United States (U.S.) and its territories. Responsibility for the NWPL was transferred to the Corps from the U.S. Fish and Wildlife Service (FWS) in 2006. From 2006 to 2012 the Corps led an interagency effort to update the list in conjunction with the U.S. Environmental Protection Agency (EPA), the FWS, and the USDA Natural Resources Conservation Service (NRCS), culminating in the publication of the 2012 NWPL. In 2013 and 2014 geographic ranges and nomenclature were updated. This paper presents the fourth update of the list under Corps administration. During the current update, the indicator status of 1689 species was reviewed. A total of 306 ratings of 186 species were changed during the update. -
Phylogenetic Analyses Place the Monotypic Dryopolystichum Within Lomariopsidaceae
A peer-reviewed open-access journal PhytoKeysPhylogenetic 78: 83–107 (2017) analyses place the monotypic Dryopolystichum within Lomariopsidaceae 83 doi: 10.3897/phytokeys.78.12040 RESEARCH ARTICLE http://phytokeys.pensoft.net Launched to accelerate biodiversity research Phylogenetic analyses place the monotypic Dryopolystichum within Lomariopsidaceae Cheng-Wei Chen1,*, Michael Sundue2,*, Li-Yaung Kuo3, Wei-Chih Teng4, Yao-Moan Huang1 1 Division of Silviculture, Taiwan Forestry Research Institute, 53 Nan-Hai Rd., Taipei 100, Taiwan 2 The Pringle Herbarium, Department of Plant Biology, The University of Vermont, 27 Colchester Ave., Burlington, VT 05405, USA 3 Institute of Ecology and Evolutionary Biology, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, 10617, Taiwan 4 Natural photographer, 664, Hu-Shan Rd., Caotun Township, Nantou 54265, Taiwan Corresponding author: Yao-Moan Huang ([email protected]) Academic editor: T. Almeida | Received 1 February 2017 | Accepted 23 March 2017 | Published 7 April 2017 Citation: Chen C-W, Sundue M, Kuo L-Y, Teng W-C, Huang Y-M (2017) Phylogenetic analyses place the monotypic Dryopolystichum within Lomariopsidaceae. PhytoKeys 78: 83–107. https://doi.org/10.3897/phytokeys.78.12040 Abstract The monotypic fern genusDryopolystichum Copel. combines a unique assortment of characters that ob- scures its relationship to other ferns. Its thin-walled sporangium with a vertical and interrupted annulus, round sorus with peltate indusium, and petiole with several vascular bundles place it in suborder Poly- podiineae, but more precise placement has eluded previous authors. Here we investigate its phylogenetic position using three plastid DNA markers, rbcL, rps4-trnS, and trnL-F, and a broad sampling of Polypodi- ineae. -
The Biodiversity of Atewa Forest
The Biodiversity of Atewa Forest Research Report The Biodiversity of Atewa Forest Research Report January 2019 Authors: Jeremy Lindsell1, Ransford Agyei2, Daryl Bosu2, Jan Decher3, William Hawthorne4, Cicely Marshall5, Caleb Ofori-Boateng6 & Mark-Oliver Rödel7 1 A Rocha International, David Attenborough Building, Pembroke St, Cambridge CB2 3QZ, UK 2 A Rocha Ghana, P.O. Box KN 3480, Kaneshie, Accra, Ghana 3 Zoologisches Forschungsmuseum A. Koenig (ZFMK), Adenauerallee 160, D-53113 Bonn, Germany 4 Department of Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK 5 Department ofPlant Sciences, University ofCambridge,Cambridge, CB2 3EA, UK 6 CSIR-Forestry Research Institute of Ghana, Kumasi, Ghana and Herp Conservation Ghana, Ghana 7 Museum für Naturkunde, Berlin, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstr. 43, 10115 Berlin, Germany Cover images: Atewa Forest tree with epiphytes by Jeremy Lindsell and Blue-moustached Bee-eater Merops mentalis by David Monticelli. Contents Summary...................................................................................................................................................................... 3 Introduction.................................................................................................................................................................. 5 Recent history of Atewa Forest................................................................................................................................... 9 Current threats -
The Urban Pteridophyte Flora of Singapore
Journal of Tropical Biology and Conservation 11: 13–26, 2014 ISSN 1823-3902 Report The urban pteridophyte flora of Singapore Benito C. Tan1,*, Angie Ng-Chua L.S.2,3, Anne Chong3, Cheryl Lao3, Machida Tan- Takako3, Ngiam Shih-Tung3, Aries Tay3, Yap Von Bing3 1 RMBR, Department of Biological Science, National University of Singapore, Singapore 119267 2 Plant Study Group Leader, Nature Society (Singapore) 3 Members of Nature Society (Singapore) Plant Study Group *Corresponding author: [email protected] Abstract A total of 81 species in 41 genera of pteridophytes were collected and documented from the urbanized parts of Singapore. Eight introduced and ornamental species are confirmed to have escaped and are growing wild in Singapore today. The endangered status of several fern species in Singapore reported in the second edition of Singapore Red Data Book are updated based on new distribution data. Keywords: Singapore, Pteridophytes, Ferns, Fern allies, Endangered species, Distribution, Singapore Red Data Book Introduction The rich flora of pteridophytes of Singapore has been comparatively well collected and studied by Holttum (1968), Johnson (1977) and Wee (1995). In his special volume treating the fern flora of Peninsular Malaysia, Holttum (1968) listed 170 species of ferns from Singapore. Johnson (1977) discussed the characters used for identifying 166 species of ferns found in Singapore and provided many with local Malay names. Nonetheless, based on literature search, Turner (1993) found 182 names of fern species reported from Singapore, including a few naturalized alien species. A year later, in a follow-up publication, the number of species was reduced to 174 (see Turner, 1994), and then down to 130 species (Turner et al., 1994). -
Insecticidal Proteins and Methods for Their Use Insektizidproteine Und Verfahren Zu Deren Verwendung Protéines Insecticides Et Leurs Procédés D’Utilisation
(19) *EP003102684B1* (11) EP 3 102 684 B1 (12) EUROPEAN PATENT SPECIFICATION (45) Date of publication and mention (51) Int Cl.: of the grant of the patent: C12N 15/82 (2006.01) C07K 14/415 (2006.01) 06.05.2020 Bulletin 2020/19 (86) International application number: (21) Application number: 15708059.9 PCT/US2015/014816 (22) Date of filing: 06.02.2015 (87) International publication number: WO 2015/120270 (13.08.2015 Gazette 2015/32) (54) INSECTICIDAL PROTEINS AND METHODS FOR THEIR USE INSEKTIZIDPROTEINE UND VERFAHREN ZU DEREN VERWENDUNG PROTÉINES INSECTICIDES ET LEURS PROCÉDÉS D’UTILISATION (84) Designated Contracting States: (74) Representative: J A Kemp LLP AL AT BE BG CH CY CZ DE DK EE ES FI FR GB 14 South Square GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO Gray’s Inn PL PT RO RS SE SI SK SM TR London WC1R 5JJ (GB) (30) Priority: 07.02.2014 US 201461937288 P (56) References cited: WO-A2-2013/098858 (43) Date of publication of application: 14.12.2016 Bulletin 2016/50 • H. K. ABICHT ET AL: "Genome Sequence of Desulfosporosinus sp. OT, an Acidophilic (73) Proprietors: Sulfate-Reducing Bacterium from Copper Mining • Pioneer Hi-Bred International, Inc. Waste in Norilsk, Northern Siberia", JOURNAL Johnston, Iowa 50131-1014 (US) OF BACTERIOLOGY, vol. 193, no. 21, 1 November • E. I. du Pont de Nemours and Company 2011 (2011-11-01), pages 6104-6105, Wilmington, DE 19805 (US) XP055196331, ISSN: 0021-9193, DOI: 10.1128/JB.06018-11 -& DATABASE UniProt (72) Inventors: [Online] 16 November 2011 (2011-11-16), • BARRY, Jennifer "SubName: Full=Uncharacterized protein Ames, Iowa 50014 (US) {ECO:0000313|EMBL:EGW36042.1};", • HAYES, Kevin XP002741068, retrieved from EBI accession no. -
Diversity and Distribution of Ferns in Forest Over Limestone in Cebu Island Key Biodiversity Areas (Kbas), Philippines
BIODIVERSITAS ISSN: 1412-033X Volume 21, Number 1, January 2020 E-ISSN: 2085-4722 Pages: 413-421 DOI: 10.13057/biodiv/d210148 Diversity and distribution of ferns in forest over limestone in Cebu Island Key Biodiversity Areas (KBAs), Philippines EDGARDO P. LILLO1,2,♥, ARCHIEBALD B. MALAKI1,3,♥♥, STEVE MICHAEL T. ALCAZAR1,3, RAAMAH ROSALES1,♥♥♥, BERNARDO R. REDOBLADO1, ERWIN PANTINOPLE1, RITCHE U. NUEVO1, ROBERTO C. CUTILLAR1, ARNALDO ALMIRANTE1, INOCENCIO E. BUOT JR4,♥♥♥♥ ¹Cebu Technological University. Argao Campus, Argao 6021, Cebu, Philippines. ♥email: [email protected], ♥♥[email protected], ♥♥♥[email protected] 2Department of Forest Biological Sciences, College of Forestry and Natural Resources, University of the Philippines Los Baños, College Laguna 4031, Laguna, Philippines 3School of Environmental Science and Management, University of the Philippines Los Baños, College Laguna 4031, Laguna, Philippines 4Institute of Biological Sciences, University of the Philippines Los Baños College Laguna (4031), Laguna, Philippines. Tel: +63-922-8140447 ♥♥♥♥email: [email protected] Manuscript received: 25 September 2019. Revision accepted: 31 December 2019. Abstract. Lillo EP, Malaki AB, Alcazar SMT, Rosales R, Redoblado BR, Pantinople E, Nuevo RU, Cutillar RC, Almirante A, Buot IE Jr. 2020. Diversity and distribution of ferns in forest over limestone in Cebu Island Key Biodiversity Areas (KBAs), Philippines. Biodiversitas 21: 413-421. Three forest areas of Cebu Island, Philippines were recognized as Key Biodiversity Areas (KBAs) by Department of Environment and Natural Resources [DENR], Philippines based on the criteria of vulnerability and irreplaceability, namely Nug-as of Alcoy, Palinpinon Range of Dalaguete, and Mt. Lantoy of Argao. The study aimed to assess the composition, diversity, and distribution of ferns in the aforementioned KBA's. -
Nephrolepidaceae (P.H
Flora Malesiana, Series II, Volume 4 (2012) 97–122 NEPHROLEPIDACEAE (P.H. Hovenkamp, Leiden, The Netherlands & F. Miyamoto, Kanagawa, Japan) Nephrolepidaceae Pic.Serm., Webbia 29 (1974) 8; K.U.Kramer in K.U.Kramer & P.S.Green (eds.), Fam. Gen. Vasc. Pl. (1990) 188. — Type genus: Nephrolepis Schott. In considering this a monogeneric family we follow the treatment in the Families and Genera of Vacular Plants (Kramer 1990). In the past, Nephrolepis was considered to be variously allied with Davallia, Oleandra and/or Arthropteris in Nephrolepidaceae, Oleandraceaea or Davalliaceaea (see Pichi Sermolli 1974 for a concise review), but both molecular phylogenies and morphological data disagree with that position. Molecular phylogenies (Hasebe et al. 1995; Liu et al. 2007; Schuettpelz & Pryer 2008) indicate separate positions for all of these genera, while morphologically, Nephrolepis is a highly distinct genus, with the unique character of the very distinctive stolons and although recent studies suggest that it should be aligned with Lomariopsis and Cyclopeltis (Smith et al. 2006) we here maintain it for the time being in its own family. References: Hasebe, M., P.G. Wolf, K.M. Pryer, K. Ueda, M. Ito, R. Sano, G.J. Gastony, J. Yoko yama, J.R. Manhart, N. Murakami, E.H. Crane, C.H. Haufler & W.D. Hauk, Fern phylogeny based on rbcL nucleotide sequences. Amer. Fern J. 85 (1995) 134–181. — Liu, H.M., X.C. Zhang, W. Wang, Y.L. Qiu & Z.D. Chen, Molecular phylogeny of the fern family Dryopteridaceae inferred from chlo roplast rbcL and atpB genes. Int. J. Pl. Sci. 168 (2007) 1311–1323. -
Supplementary Information
Environmentally driven extinction and opportunistic origination explain fern diversification patterns Samuli Lehtonen*1,2†, Daniele Silvestro*3,4,5,6†, Dirk Nikolaus Karger2,7, Christopher Scotese8, Hanna Tuomisto2, Michael Kessler7, Carlos Peña2, Niklas Wahlberg2,9, Alexandre Antonelli3,4,10 1Herbarium, Biodiversity Unit, University of Turku, 20014 Turku, Finland 2Department of Biology, University of Turku, 20014 Turku, Finland 3Department of Biological and Environmental Sciences, University of Gothenburg, Carl Skottsbergs gata 22B, Gothenburg 413 19, Sweden 4Gothenburg Global Biodiversity Centre, Box 461, SE-405 30 Göteborg, Sweden 5Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland 6Swiss Institute of Bioinformatics, Quartier Sorge, 1015 Lausanne, Switzerland 7Department of Systematic and Evolutionary Botany, University of Zurich, 8008 Zurich, Switzerland 8Earth and Planetary Sciences, Northwestern University, Evanston, IL, USA 9Department of Biology, Lund University, Lund, Sweden 10Gothenburg Botanical Garden, Carl Skottsbergs gata 22A, Gothenburg 413 19, Sweden †These authors contributed equally to this work. *Correspondence to: [email protected] or [email protected] 1 Supplementary Information Supplementary Materials and Methods PaleoDEMs The paleogeographic digital elevation models1 were built on the basis of digital topographic and bathymetric datasets of the modern world2–4. These data were combined into a global dataset with 6- minute resolution. The individual grid cells were rotated to their paleopositions using the PALEOMAP Global Plate Tectonic Model5, and the modern digital topographic and bathymetric values were corrected and modified using the lithofacies and paleoenvironmental data. These data were constructed using the database of Paleogeographic Atlas Project6–8 supplemented by additional lithological and paleoenvironmental records for the Permian and Jurassic9,10 in combination with numerous regional and global paleogeographic atlases. -
Anatomical Examination of the Petiole of Eupolypods I (Polypodiales)
BIODIVERSITAS ISSN: 1412-033X Volume 21, Number 5, May 2020 E-ISSN: 2085-4722 Pages: 1767-1777 DOI: 10.13057/biodiv/d210501 Anatomical examination of the petiole of eupolypods I (Polypodiales) JEANETTE MARA P. TAN1, MARIA CELESTE BANATICLA-HILARIO2, PASTOR MALABRIGO3, MARJORIE DELOS ANGELES1, INOCENCIO E. BUOT, JR.1 1Institute of Biological Sciences, College of Arts and Sciences, University of the Philippines Los Baños. College, Batong Malake, Laguna 4031, Philippines. email: [email protected] 2T.T. Chang Genetic Resources Center, International Rice Research Institute, Los Baños 4030, Laguna, Philippines 3Department of Forest Biological Sciences, College of Forestry and Natural Resources, University of the Philippines Los Baños. College, Batong Malake, Laguna 4031, Philippines Manuscript received: 17 December 2019. Revision accepted: 2 April 2020. Abstract. Tan JMP, Banaticla-Hilario MC, Malabrigo P, Angeles MD, JR Buot IE. 2020. Anatomical examination of the petiole of eupolypods I (Polypodiales). Biodiversitas 21: 1767-1777. The efficiency of petiole anatomy characters in identifying and describing the species and families of eupolypods I (Polypodiales) were explored. Specimens of 21 species, representing 13 genera and nine families were collected and processed in the laboratory, following proper dehydration and staining protocols. Transverse sections of the basal, median, and distal portions of the petiole were examined, photographed and analyzed. The results showed five taxonomically significant characters that can serve as family markers: (i) xylem shape, (ii) vascular bundle shape, (iii) number of vascular bundles, (iv) presence and absence of circumendodermal band, and (v) presence and absence of adaxial grooves. Based on these characters, a taxonomic key to the families of eupolypods I was constructed. -
Robin Halley 1944-2010 Submitted by the San Diego Fern Society
Volume 38 Number 1 Jan-March 2011 Editors: Joan Nester-Hudson and David Schwartz Robin Halley 1944-2010 submitted by the San Diego Fern Society The worldwide Fern community has lost one of its Robin shared his most ardent enthusiasts. Nearly everyone on 6 con- knowledge of ferns tinents who was interested in ferns knew Robin Hal- with his local fern ley’s name and his reputation as a person of extensive society and with fern information. He networked with others passionate the Los Angeles about ferns, maintained a question-and-answer forum International Fern by email and began a website for the San Diego Fern Society. He gave Society. He traveled to Great Britain, China, New Zea- many lectures and land, Australia, Costa Rica and other tropical countries demonstrations, to meet with fellow ferners, tour their gardens, and wrote numerous speak to their fern societies. While there he would trek articles, and served the backwoods looking for ferns, photographing, and as Fern World edi- often arranging to bring back unusual specimens, en- tor for years. He during the numerous exporting and importing regula- would generously tions at home and abroad. All this while working for a share divisions of San Diego computer firm. his ferns with inter- Photo by Robbin Moran Robin Halley became interested in ferns in the early ested members of 1980s, and quickly joined the San Diego Fern Society the San Diego Fern Society. He wanted to increase the which had just been established a few years earlier. He public’s awareness of the variety and beauty of ferns, began collecting ferns, learning their botanical names, and help people to obtain and successfully grow them. -
Determining Relevant Petiole Anatomy Characters to Delimit Eupolypods I Families
BIODI VERSITAS ISSN: 1412-033X Volume 21, Number 6, June 2020 E-ISSN: 2085-4722 Pages: 2721-2726 DOI: 10.13057/biodiv/d210647 Determining relevant petiole anatomy characters to delimit Eupolypods I families JEANETTE MARA P. TAN, INOCENCIO E. BUOT, JR. Institute of Biological Sciences, College of Arts and Sciences, University of the Philippines Los Baños, College, Laguna 4031, Philippines. email: [email protected] Manuscript received: 2 April 2020. Revision accepted: 23 May 2020. Abstract. Tan JMP, Buot Jr. IE. 2020. Determining relevant petiole anatomy characters to delimit Eupolypods I families. Biodiversitas 21: 2721-2726. The delineation of the families under eupolypods I has been quite challenging. With that, characters that are stable and taxonomically significant are necessary. The study attempted to use petiole anatomy characters to study the taxonomy of the eupolypods I families. Fresh eupolypods I representatives were collected from the field and were fixed with formalin-acetic acid alcohol (FAA). The petioles were cut and processed into permanent mounts using alcohol dehydration series and following standard microtechnique protocols. The petiole anatomy characters of the 21 representative species of eupolypods I were first studied of their stability and subjected to multiple correspondence analysis (MCA) to determine the most taxonomically relevant character. The MCA biplot showed that four petiole anatomy characters were useful to describe and delineate families of eupolypods I. These petiole anatomy characters included, xylem shape, vascular bundle shape, and number of vascular bundles. Keywords: Eupolypods I, multiple correspondence analysis, petiole anatomy, stable characters INTRODUCTION taxonomic groups. Martínez and Vilte (2012) were able to generate a classification of the twelve species of Pteris Up to the present, the taxonomic placement of species using shape and number of vascular bundles.