The Synthesis and Reactivity of Heterodinuclear Iron, Ruthenium, and Cobalt Compounds Containing Bridging Dithiomethylene Ligands
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Clusters – Contemporary Insight in Structure and Bonding 174 Structure and Bonding
Structure and Bonding 174 Series Editor: D.M.P. Mingos Stefanie Dehnen Editor Clusters – Contemporary Insight in Structure and Bonding 174 Structure and Bonding Series Editor: D.M.P. Mingos, Oxford, United Kingdom Editorial Board: X. Duan, Beijing, China L.H. Gade, Heidelberg, Germany Y. Lu, Urbana, IL, USA F. Neese, Mulheim€ an der Ruhr, Germany J.P. Pariente, Madrid, Spain S. Schneider, Gottingen,€ Germany D. Stalke, Go¨ttingen, Germany Aims and Scope Structure and Bonding is a publication which uniquely bridges the journal and book format. Organized into topical volumes, the series publishes in depth and critical reviews on all topics concerning structure and bonding. With over 50 years of history, the series has developed from covering theoretical methods for simple molecules to more complex systems. Topics addressed in the series now include the design and engineering of molecular solids such as molecular machines, surfaces, two dimensional materials, metal clusters and supramolecular species based either on complementary hydrogen bonding networks or metal coordination centers in metal-organic framework mate- rials (MOFs). Also of interest is the study of reaction coordinates of organometallic transformations and catalytic processes, and the electronic properties of metal ions involved in important biochemical enzymatic reactions. Volumes on physical and spectroscopic techniques used to provide insights into structural and bonding problems, as well as experimental studies associated with the development of bonding models, reactivity pathways and rates of chemical processes are also relevant for the series. Structure and Bonding is able to contribute to the challenges of communicating the enormous amount of data now produced in contemporary research by producing volumes which summarize important developments in selected areas of current interest and provide the conceptual framework necessary to use and interpret mega- databases. -
NBO Applications, 2020
NBO Bibliography 2020 2531 publications – Revised and compiled by Ariel Andrea on Aug. 9, 2021 Aarabi, M.; Gholami, S.; Grabowski, S. J. S-H ... O and O-H ... O Hydrogen Bonds-Comparison of Dimers of Thiocarboxylic and Carboxylic Acids Chemphyschem, (21): 1653-1664 2020. 10.1002/cphc.202000131 Aarthi, K. V.; Rajagopal, H.; Muthu, S.; Jayanthi, V.; Girija, R. Quantum chemical calculations, spectroscopic investigation and molecular docking analysis of 4-chloro- N-methylpyridine-2-carboxamide Journal of Molecular Structure, (1210) 2020. 10.1016/j.molstruc.2020.128053 Abad, N.; Lgaz, H.; Atioglu, Z.; Akkurt, M.; Mague, J. T.; Ali, I. H.; Chung, I. M.; Salghi, R.; Essassi, E.; Ramli, Y. Synthesis, crystal structure, hirshfeld surface analysis, DFT computations and molecular dynamics study of 2-(benzyloxy)-3-phenylquinoxaline Journal of Molecular Structure, (1221) 2020. 10.1016/j.molstruc.2020.128727 Abbenseth, J.; Wtjen, F.; Finger, M.; Schneider, S. The Metaphosphite (PO2-) Anion as a Ligand Angewandte Chemie-International Edition, (59): 23574-23578 2020. 10.1002/anie.202011750 Abbenseth, J.; Goicoechea, J. M. Recent developments in the chemistry of non-trigonal pnictogen pincer compounds: from bonding to catalysis Chemical Science, (11): 9728-9740 2020. 10.1039/d0sc03819a Abbenseth, J.; Schneider, S. A Terminal Chlorophosphinidene Complex Zeitschrift Fur Anorganische Und Allgemeine Chemie, (646): 565-569 2020. 10.1002/zaac.202000010 Abbiche, K.; Acharjee, N.; Salah, M.; Hilali, M.; Laknifli, A.; Komiha, N.; Marakchi, K. Unveiling the mechanism and selectivity of 3+2 cycloaddition reactions of benzonitrile oxide to ethyl trans-cinnamate, ethyl crotonate and trans-2-penten-1-ol through DFT analysis Journal of Molecular Modeling, (26) 2020. -
Proton-Coupled Reduction of N2 Facilitated by Molecular Fe Complexes
Proton-Coupled Reduction of N2 Facilitated by Molecular Fe Complexes Thesis by Jonathan Rittle In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy CALIFORNIA INSTITUTE OF TECHNOLOGY Pasadena, California 2016 (Defended November 9, 2015) ii 2016 Jonathan Rittle All Rights Reserved iii ACKNOWLEDGEMENTS My epochal experience in graduate school has been marked by hard work, intellectual growth, and no shortage of deadlines. These facts leave little opportunity for an acknowledgement of those whose efforts were indispensable to my progress and perseverance, and are therefore disclosed here. First and foremost, I would like to thank my advisor, Jonas Peters, for his tireless efforts in molding me into the scientist that I am today. His scientific rigor has constantly challenged me to strive for excellence and I am grateful for the knowledge and guidance he has provided. Jonas has given me the freedom to pursue scientific research of my choosing and shown a remarkable degree of patience while dealing with my belligerent tendencies. Perhaps equally important, Jonas has built a research group that is perpetually filled with the best students and postdoctoral scholars. Their contributions to my graduate experience are immeasurable and I wish them all the best of luck in their future activities. In particular, John Anderson, Dan Suess, and Ayumi Takaoka were senior graduate students who took me under their wings when I joined the lab as a naïve first-year graduate student. I am grateful for the time and effort that they collectively spent in teaching me the art of chemical synthesis and for our unforgettable experiences outside of lab. -
Elucidating How Wood Adhesives Bond to Wood Cell Walls Using High-Resolution Solution-State NMR Spectroscopy
Elucidating How Wood Adhesives Bond to Wood Cell Walls using High-Resolution Solution-State NMR Spectroscopy Daniel J. Yelle U.S. Forest Service, Forest Products Laboratory Madison, WI, 53726, USA [email protected] Introduction Lignin, 25-30% of wood, is a phenolic polymer made Some extensively used wood adhesives, such as up of branched phenylpropanoid units that are capable of pMDI (polymeric methylene diphenyl diisocyanate) and reacting with other phenols during adhesive bonding. PF (phenol formaldehyde) have shown excellent adhesion Model compound studies have shown that under alkaline properties with wood. However, distinguishing whether conditions and ≥100 °C, β-aryl ether linkages release for- the strength is due to physical bonds (i.e., van der Waals, maldehyde to give vinyl ether linkages (Figure 2a) [10]. London, or hydrogen bond forces) or covalent bonds be- Phenylcourmaran linkages release formaldehyde in a simi- tween the adherend and the adhesive is not fully under- lar fashion to give stilbene linkages (Figure 2b) [10]. 13C stood. Previous studies, where pMDI model compounds NMR spectroscopy showed that most of this released for- were reacted with wood, showed that carbamate (urethane) maldehyde ends up as the methylene bridge between the 5- formation with wood polymers is only possible when: 1. positions on guaiacyl units (Figure 2c) [11]. the number of moles of isocyanate is significantly higher a. HO H O than the moles of water molecules in the wood, 2. high γ γ HO β β α O 4 α β O 4 α O 4 temperatures are used, and 3. the isocyanate-based com- OCH3 OCH - OH 3 OCH3 O + CH pound is of low molecular weight [1]. -
Synthesis, Structure and Attempted Polymerization of a Diepoxide Macrocycle Paul Yarincik Sacred Heart University
Sacred Heart University DigitalCommons@SHU Chemistry & Physics Faculty Publications Chemistry and Physics 10-2012 Synthesis, Structure and Attempted Polymerization of a Diepoxide Macrocycle Paul Yarincik Sacred Heart University Jeffrey H. Glans Sacred Heart University, [email protected] Follow this and additional works at: http://digitalcommons.sacredheart.edu/chem_fac Part of the Polymer Chemistry Commons Recommended Citation Yarincik, Paul and Glans, Jeffrey H., "Synthesis, Structure and Attempted Polymerization of a Diepoxide Macrocycle" (2012). Chemistry & Physics Faculty Publications. 1. http://digitalcommons.sacredheart.edu/chem_fac/1 This Article is brought to you for free and open access by the Chemistry and Physics at DigitalCommons@SHU. It has been accepted for inclusion in Chemistry & Physics Faculty Publications by an authorized administrator of DigitalCommons@SHU. For more information, please contact [email protected]. Letters in Organic Chemistry, 2012, 9, 545-548 545 Synthesis, Structure and Attempted Polymerization of a Diepoxide Macrocycle Paul Yarincik and Jeffrey H. Glans* Department of Chemistry, Sacred Heart University, Fairfield, CT 06825, USA Received October 19, 2011: Revised December 31, 2011: Accepted January 04, 2012 Abstract: A novel diepoxide containing paracyclophane was synthesized by peracid oxidation of a known paracyclo- phane diene. The resulting diepoxide was characterized. It was investigated as a potential monomer for a cyclophane con- taining polyether by cationic ring opening polymerization. None of the standard catalyst systems for such a polymeriza- tion were successful in producing polymer. Keywords: Cationic polymerization, cyclophane, diepoxide, macrocycle. R INTRODUCTION R O O O+ Cationic polymerization of olefins is one of the major R+ routes to high molecular weight polymers [1]. The mecha- O O+ O nism involves nucleophilic attack of the alkene functional group on the electron poor initiator (initiation) or the grow- ing cationic chain end (propagation). -
Or· 8-Annoquriioltlmb WITH. NIT~~~OI,4
BIBIUD.~; TliE REACTION 8-AnNOQuriiOLtlmB WITH. NIT~~~OI,4 •' >'•' • or·I,' ",i. by Hugh Bu:rknla·p.·,:Ilona.hoe B.s.• ,. Rookhurst College, 194.3 M.A.,, Univ&rESi.ty of ICansas, · 1947 . Submitted to the Department of ·chemistry and the Faculty. of. the . G:raduate School or the University of Kansas in partial fulfillment ot the ?'equirements for the de• gree of Doctor ot Philosophy. Advisory Committee · May, 19.$0 AOKNOWLEOOMENT The author wishes to ex.press his thanks and appreciation to Dr. J. H. Burokhalter,, who suggested this problem, and Dr. a. A. Vanderwerf for ·their helpful suggestions and guidance during the course of this work. H.B.D. TABLE OF OONTEN'TS Chapter Page I • THE PROBLE?i Olr MALARIA. A. Introduction • • • • • . • • 1 B. The types of malaria. • • • • • • •• 2 O. The biology of malarial infection • • 3 D. The prophylaxis and treatment of malaria: •. ;•' •. • • •. • . ;.. • • : •••• ·• • • ., 6 II. ·Atfl'IMALARIAL ·:DRUGS. :· • · ,, A. Olassific at ion and. screening of antimalarial drugs • • . ,, . .. ' . • • • • 12 B. Historical • • • • • • • • • • • • • 1~ c. Quinine • .. • • • .. • • • • • • • • • 16 D. Synthetic substitutes • • • • • • • • 19 l. Plasmochin • • • • • .. • • • • • 19 2 •. Quinaorine • • • • • .. • • • • • 21 3. Ohloroquine • • • • • • • • • •• 21 q.. Pentaquine •• • • • • • • • • • 23 s. Paludrine • • • • • • • • • • • • 2q. E. Me(lhanism ot action of antimalarial drugs • • • • • • • •• • • • • • • • 2$ 1. The metabolite-antimetaboli te relationship • • • • • • • •• • 2.$ 2. The quinoid•Quinonimine theory • 26 3. Conclusions • • • • • • • • • •• 28 · -Ohapter III.· THE ANTIMALARIAL PROGRAM 1941-1945 . .A. The overall program • • • • • • • • • 30 .a. :._ Tb(j ·4•aminoquinolinea • • • • • • • • .32 · <h ·. The 8-aminoqu.inolines • : • . • • • • • • 34. IV. • DISCUSSION Of THE PROBLEM ) • • • • • .• • • • .38 ·V. · DISCUSSION OF· RESULTS. · - . A.;, Unsymmetrical hybrids related to '. propanediemine * • • • • •. • • • • • 46 B. ··Symmetrical: hybrida related to prc,pan~di8J1iinet ~d methanediamine • • S2 . -
Bonding in Coordination Compounds
2/4/2017 Bonding in coordination compounds Nobel prize 1913 • Alfred Werner - 1893 • VBT • Crystal Field Theory (CFT) • Modified CFT, known as Ligand Field Theory • MOT How & Why? 1 2/4/2017 Valance Bond Theory Basic Principle A covalent bond forms when the orbtials of two atoms overlap and are occupied by a pair of electrons that have the highest probability of being located between the nuclei. Linus Carl Pauling (1901-1994) Nobel prizes: 1954, 1962 Valance Bond Model Ligand = Lewis base Metal = Lewis acid s, p and d orbitals give hybrid orbitals with specific geometries Number and type of M-L hybrid orbitals determines geometry of the complex Octahedral Complex 3+ e.g. [Cr(NH3)6] 2 2/4/2017 2- 2- Tetrahedral e.g. [Zn(OH)4] Square Planar e.g. [Ni(CN)4] Limitations of VB theory Cannot account for colour of complexes May predict magnetism wrongly Cannot account for spectrochemical series Crystal Field Theory 400 500 600 800 •The relationship between colors and complex metal ions 3 2/4/2017 Crystal Field Model A purely ionic model for transition metal complexes. Ligands are considered as point charge. Predicts the pattern of splitting of d-orbitals. Used to rationalize spectroscopic and magnetic properties. d-orbitals: look attentively along the axis Linear combination of 2 2 2 2 dz -dx and dz -dy 2 2 2 d2z -x -y 4 2/4/2017 Octahedral Field • We assume an octahedral array of negative charges placed around the metal ion (which is positive). • The ligand and orbitals lie on the same axes as negative charges. -
Converting Disulfide Bridges in Native Peptides to Stable Methylene Thioacetals
Chemical Science View Article Online EDGE ARTICLE View Journal | View Issue Converting disulfide bridges in native peptides to stable methylene thioacetals† Cite this: Chem. Sci.,2016,7, 7007 C. M. B. K. Kourra and N. Cramer* Disulfide bridges play a crucial role in defining and rigidifying the three-dimensional structure of peptides. However, disulfides are inherently unstable in reducing environments. Consequently, the development of strategies aiming to circumvent these deficiencies – ideally with little structural disturbance – are highly sought after. Herein, we report a simple protocol converting the disulfide bond of peptides into highly stable methylene thioacetal. The transformation occurs under mild, biocompatible conditions, enabling the conversion of unprotected native peptides into analogues with enhanced stability. The developed Received 23rd May 2016 protocol is applicable to a range of peptides and selective in the presence of a multitude of potentially Accepted 24th July 2016 reactive functional groups. The thioacetal modification annihilates the reductive lability and increases the DOI: 10.1039/c6sc02285e serum, pH and temperature stability of the important peptide hormone oxytocin. Moreover, it is shown www.rsc.org/chemicalscience that the biological activities for oxytocin are retained. Creative Commons Attribution-NonCommercial 3.0 Unported Licence. Introduction disulde bond engineering emerged as an important strategy to improve the metabolic stability of disulde-containing peptides, Peptides have recently been enjoying a renewed interest in whilst maintaining their biological activity. For instance, their application as therapeutic agents.1 They provide a large replacements of the disulde group with a lactam,10 thioether,11 a chemical space with a diverse array of molecular frameworks selenium12 or dicarba13 analogues have been reported.5 Many of for the development of novel therapeutics for a plethora of these methods require signicant modication of the synthetic biomedical applications. -
A TRANS INFLUENCE and Π-CONJUGATION EFFECTS on LIGAND SUBSTITUTION REACTIONS of Pt(II) COMPLEXES with TRIDENTATE PENDANT N/S-DONOR LIGANDS
Tanzania Journal of Science 44(2): 45-63, 2018 ISSN 0856-1761, e-ISSN 2507-7961 © College of Natural and Applied Sciences, University of Dar es Salaam, 2018 A TRANS INFLUENCE AND π-CONJUGATION EFFECTS ON LIGAND SUBSTITUTION REACTIONS OF Pt(II) COMPLEXES WITH TRIDENTATE PENDANT N/S-DONOR LIGANDS Grace A Kinunda Chemistry Department, University of Dar es Salaam, P. O. Box 35061, Dar es Salaam, Tanzania E-mail:[email protected]/[email protected] ABSTRACT The rate of displacement of the chloride ligands by three neutral nucleophiles (Nu) of different steric demands, namely thiourea (TU), N,N’-dimethylthiourea (DMTU) and N,N,N,’N- tetramethylthiourea (TMTU) in the complexes viz; [Pt(II)(bis(2-pyridylmethyl)amine)Cl]ClO4, (Pt1), [Pt(II){N-(2-pyridinylmethyl)-8-quinolinamine}Cl]Cl, (Pt2), [Pt(II)(bis(2- pyridylmethyl)sulfide)Cl]Cl, (Pt3) and [Pt(II){8-((2-pyridylmethyl)thiol)quinoline}Cl]Cl, (Pt4) was studied under pseudo first-order conditions as a function of concentration and temperature using a stopped-flow technique and UV-Visible spectrophotometry. The observed pseudo first- order rate constants for substitution reactions obeyed the simple rate law kobs k2Nu. The results have shown that the chloro ligand in Pt(N^S^N) complexes is more labile by two orders of magnitude than Pt(N^N^N) complexes due to the high trans labilizing effect brought by the S- donor atom. The quinoline based Pt(II) complexes (Pt2 and Pt4) have been found to be slow than their pyridine counterparts Pt1 and Pt3 due to poor π-acceptor ability of quinoline. -
1.5 Phosphines As Ligands in Transition Metal Complexes
_________________________________________________________________________Swansea University E-Theses The synthesis and characterisation of some novel compounds containing Pt-Se bonds. Webster, Christopher Alan How to cite: _________________________________________________________________________ Webster, Christopher Alan (2006) The synthesis and characterisation of some novel compounds containing Pt-Se bonds.. thesis, Swansea University. http://cronfa.swan.ac.uk/Record/cronfa43110 Use policy: _________________________________________________________________________ This item is brought to you by Swansea University. Any person downloading material is agreeing to abide by the terms of the repository licence: copies of full text items may be used or reproduced in any format or medium, without prior permission for personal research or study, educational or non-commercial purposes only. The copyright for any work remains with the original author unless otherwise specified. The full-text must not be sold in any format or medium without the formal permission of the copyright holder. Permission for multiple reproductions should be obtained from the original author. Authors are personally responsible for adhering to copyright and publisher restrictions when uploading content to the repository. Please link to the metadata record in the Swansea University repository, Cronfa (link given in the citation reference above.) http://www.swansea.ac.uk/library/researchsupport/ris-support/ The Synthesis and Characterisation of Some Novel Compounds Containing Pt-Se Bonds Christopher Alan Webster Department of Chemistry University of Wales Swansea November 2006 ProQuest Number: 10821502 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a com plete manuscript and there are missing pages, these will be noted. -
Selective Additions to Unsaturated Carbon-Carbon Bonds by the Use
Florida State University Libraries Electronic Theses, Treatises and Dissertations The Graduate School 2014 Selective Additions to Unsaturated Carbon- Carbon Bonds by the Use of N-Heterocyclic Carbene-Copper(I) Catalysts Brian A. Ondrusek Follow this and additional works at the FSU Digital Library. For more information, please contact [email protected] FLORIDA STATE UNIVERSITY COLLEGE OF ARTS AND SCIENCES SELECTIVE ADDITIONS TO UNSATURATED CARBON-CARBON BONDS BY THE USE OF N-HETEROCYCLIC CARBENE-COPPER(I) CATALYSTS By BRIAN A. ONDRUSEK A Dissertation submitted to the Department of Chemistry and Biochemistry in partial fulfillment of the requirements for the degree of Doctor of Philosophy Degree Awarded: Summer Semester, 2014 Brian Ondrusek defended this dissertation on July 1st, 2014. The members of his supervisory committee were: D. Tyler McQuade Professor Directing Dissertation Bruce Locke University Representative Michael Roper Committee Member Gregory Dudley Committee Member Igor Alabugin Committee member The Graduate School has verified and approved the above-named committee members, and certifies that the dissertation has been approved in accordance with university requirements. ii I dedicate this effort to my family, without whose support I could never have accomplished all that I have. iii ACKNOWLEDGMENTS I would like to acknowledge Dr. Tyler McQuade for taking a very green graduate student and whipping me into shape. I’m sure that at times it was no easier for him than it was for myself, but his constant support has enabled me to develop as I have into a more mature scientist. He was always willing to help me understand concepts with which I was struggling, and he was always willing to allow me to explore topics in which I was interested. -
Structure and Conformation of Bilirubin
364 C. C. KUENZLE, M. H. WEIBEL AND R. R. PELLONI Kuenzle, C. C. (1970b) Biochem. J. 119, 411-435 Kuenzle, C. C., Weibel, M. H., Pelloni, R. R. & Kuenzle, C. C. (1973) in Metabolic Conjugation andMeta- Hemmerich, P. (1973), Biochem. J. 133, 364-368 bolic Hydrolysis (Fishman, W. H., ed.), vol. 3, Academic von Dobeneck, H. & Brunner, E. (1965) Hoppe-Seyler's Press, New York, in the press Z. Physiol. Chem. 341, 157-166 APPENDIX Structure and Conformation of Bilirubin OPPOSING VIEWS THAT INVOKE TAUTOMERIC EQUILIBRIA, HYDROGEN BONDING AND A BETAINE MAY BE RECONCILED BY A SINGLE RESONANCE HYBRID By CLIVE C. KUENZLE,* MATTHIAS H. WEIBEL,* RENATO R. PELLONI* and PETER HEMMERICHt * Department ofPharmacology and Biochemistry, School of Veterinary Medicine, University ofZurich, CH-8057 Zurich, Switzerland and t Department ofBiology, University ofKonstanz, D-7750 Konstanz, Germany A novel conformational structure of bilirubin is presented which obtains maximum stabilization through a system of four intramolecular hydrogen bonds. Two hydrogen bonds link oxygen and nitrogen atoms of each end ring to the contralateral carboxyl group. The proposed structure can explain a variety of uncommon features of bilirubin, and reconciles many seemingly contradictory hypotheses by accommodating them in individual structures which are mesomeric forms of one resonance hybrid. In the light of this newly conceived structure the following characteristics of bilirubin are re-evaluated: the stability of the compound, its reaction with diazomethane, the conformational beha- viour of its dimethyl ester, its spectral properties, the chirality of the compound when complexed to serum albumin, and the structure of its metal chelates. The basic structure of bilirubin was elucidated by when bilirubin is esterified with diazomethane Fischer's group (Fischer et al., 1941; Fischer & (Kuenzle, 1970a).