Studies on the Gram-Negative Pleomorphic Bacteria Associated
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Identification of Pasteurella Species and Morphologically Similar Organisms
UK Standards for Microbiology Investigations Identification of Pasteurella species and Morphologically Similar Organisms Issued by the Standards Unit, Microbiology Services, PHE Bacteriology – Identification | ID 13 | Issue no: 3 | Issue date: 04.02.15 | Page: 1 of 28 © Crown copyright 2015 Identification of Pasteurella species and Morphologically Similar Organisms Acknowledgments UK Standards for Microbiology Investigations (SMIs) are developed under the auspices of Public Health England (PHE) working in partnership with the National Health Service (NHS), Public Health Wales and with the professional organisations whose logos are displayed below and listed on the website https://www.gov.uk/uk- standards-for-microbiology-investigations-smi-quality-and-consistency-in-clinical- laboratories. SMIs are developed, reviewed and revised by various working groups which are overseen by a steering committee (see https://www.gov.uk/government/groups/standards-for-microbiology-investigations- steering-committee). The contributions of many individuals in clinical, specialist and reference laboratories who have provided information and comments during the development of this document are acknowledged. We are grateful to the Medical Editors for editing the medical content. For further information please contact us at: Standards Unit Microbiology Services Public Health England 61 Colindale Avenue London NW9 5EQ E-mail: [email protected] Website: https://www.gov.uk/uk-standards-for-microbiology-investigations-smi-quality- and-consistency-in-clinical-laboratories UK Standards for Microbiology Investigations are produced in association with: Logos correct at time of publishing. Bacteriology – Identification | ID 13 | Issue no: 3 | Issue date: 04.02.15 | Page: 2 of 28 UK Standards for Microbiology Investigations | Issued by the Standards Unit, Public Health England Identification of Pasteurella species and Morphologically Similar Organisms Contents ACKNOWLEDGMENTS ......................................................................................................... -
International Code of Nomenclature of Prokaryotes
2019, volume 69, issue 1A, pages S1–S111 International Code of Nomenclature of Prokaryotes Prokaryotic Code (2008 Revision) Charles T. Parker1, Brian J. Tindall2 and George M. Garrity3 (Editors) 1NamesforLife, LLC (East Lansing, Michigan, United States) 2Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (Braunschweig, Germany) 3Michigan State University (East Lansing, Michigan, United States) Corresponding Author: George M. Garrity ([email protected]) Table of Contents 1. Foreword to the First Edition S1–S1 2. Preface to the First Edition S2–S2 3. Preface to the 1975 Edition S3–S4 4. Preface to the 1990 Edition S5–S6 5. Preface to the Current Edition S7–S8 6. Memorial to Professor R. E. Buchanan S9–S12 7. Chapter 1. General Considerations S13–S14 8. Chapter 2. Principles S15–S16 9. Chapter 3. Rules of Nomenclature with Recommendations S17–S40 10. Chapter 4. Advisory Notes S41–S42 11. References S43–S44 12. Appendix 1. Codes of Nomenclature S45–S48 13. Appendix 2. Approved Lists of Bacterial Names S49–S49 14. Appendix 3. Published Sources for Names of Prokaryotic, Algal, Protozoal, Fungal, and Viral Taxa S50–S51 15. Appendix 4. Conserved and Rejected Names of Prokaryotic Taxa S52–S57 16. Appendix 5. Opinions Relating to the Nomenclature of Prokaryotes S58–S77 17. Appendix 6. Published Sources for Recommended Minimal Descriptions S78–S78 18. Appendix 7. Publication of a New Name S79–S80 19. Appendix 8. Preparation of a Request for an Opinion S81–S81 20. Appendix 9. Orthography S82–S89 21. Appendix 10. Infrasubspecific Subdivisions S90–S91 22. Appendix 11. The Provisional Status of Candidatus S92–S93 23. -
Type Quorum Sensing System Contributes in the Regulation of Swarming Motility and Antibiosis in a Non-Pathogenic Burkholderia Gladioli Strain
SUNDAY 1 MONDAY 2 TUESDAY 3 WEDNESDAY 4 THURSDAY 5 7:00‐9:00 BREAKFAST BREAKFAST BREAKFAST BREAKFAST ORAL SESSION I ORAL SESSION IV ORAL SESSION VI 9:00‐10:40 Chair: Chair: Chair: 10:40‐11:00 COFFEE BREAK COFFEE BREAK COFFEE BREAK SYMPOSIUM DEPARTURE ORAL SESSION II ORAL SESSION VII 11:00‐12:40 Chair: Chair: Chair: REGISTRATION 11:00 – 18:00 12:40‐13:00 COFFEE BREAK COFFEE BREAK COFFEE BREAK PLENARY SESSION V PLENARY SESSION I PLENARY SESSION III VÍCTOR DE LORENZO 13:00‐14:00 GAD FRANKEL VANESSA SPERANDIO Centro Nacional de Imperial College London UT Southwestern USA Biotecnología, CSIC. España 14:00‐16:00 LUNCH LUNCH LUNCH PLENARY SESSION VI OPENING CEREMONY ORAL SESSION III ORAL SESSION V 16:00‐17:00 JAVIER TORRES LOPEZ 17:45‐18:00 Chair: Chair: IMSS PLENARY SESSION IV OPENING TALK PLENARY SESSION II LAURA CAMARENA FRANCISCO BOLÍVAR GISELA STORZ Closing Ceremony 17:00‐18:00 Instituto de Investigaciones IBT‐UNAM NICHD, NIH. Bethesda, USA 17:00‐17:30 Biomédicas, UNAM 18:00‐19:00 Poster Session Poster Session WELCOME COCKTAIL DINNER AND DANCING 18:00‐20:00 Odd Numbers Even Numbers 19:00‐21:00 20:00 h P L E N A R I A S FIFTH MEETING ON BIOCHEMISTRY ANDMOLECULAR BIOLOGY OF BACTERIA OCTOBER 1-5, 2017 EXHACIENDACHAUTLA, PUEBLA, MEXICO Biotecnología y los beneficios de los organismos transgénicos. Dr. Francisco Bolívar Zapata Investigador Emérito. Instituto de Biotecnología, Universidad Nacional Autónoma de México. [email protected] La biotecnología de los organismos y plantas transgénicos se han usado desde hace muchos años para ayudar a contender con diferentes problemáticas y ayudar a producir satisfactores entre ellos están indudablemente nuevos medicamentos. -
Discrimination of Members of the Family Pasteurezlaceae Based On
INTERNATIONALJOURNAL OF SYSTEMATICBACTERIOLOGY, July 1997, p. 698-708 Vol. 47, No. 3 0020-7713/97/$04.00+ 0 Copyright 0 1997, International Union of Microbiological Societies Discrimination of Members of the Family PasteureZlaceae Based on Polyamine Patterns HANS-JURGEN BUSSE,'" SEBASTIAN BUN=,* ANDREAS HENSEL,l AND WERNER LUBITZ' Institut fur Mikrobiologie und Genetik, Universitat Wien, A-1030 Vienna,' and Institut fur Medizinische Chemie, Veterinannedizinische Universitat Wien,A-121 0 Vienna, Austria In a study of the classification of members of the family Pasteurelluceae, the polyamine patterns of 101 strains were analyzed. These strains included the type strains of species belonging to the genera Actinobacillus, Haemophilus, and Pasteurellu and additional strains of selected species, as well as numerous unnamed strains. Members of the genus Actinobacillus sensu stricto were characterized by the presence of 1,3-diaminopropane as the predominant compound. In the majority of the species of the genus Haemophilus sensu stricto 1,3- diaminopropane was also the major compound in the polyamine pattern. In contrast, Haemophilus intermedius subsp. gazogenes and Haemophilus parainjluenzae were characterized by high levels of 1,3-diaminopropane, cadaverine, and putrescine. These results confirmed the findings of Dewhirst et al. (F. E. Dewhirst, B. J. Paster, I. Olsen, and G. J. Fraser, Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. 1Orig. 279:35-44, 1993), who demonstrated that H. parainjluenzae is phylogenetically only distantly related to the type species of the genus Haemophilus, Haemophilus injluenzae. The phylogenetic diversity of the genus Pasteurellu sensu stricto determined by Dewhirst et al. was also reflected to some extent by different polyamine patterns. -
International Journal of Systematic and Evolutionary Microbiology
International Journal of Systematic and Evolutionary Microbiology International Code of Nomenclature of Prokaryotes --Manuscript Draft-- Manuscript Number: IJSEM-D-15-00747R1 Full Title: International Code of Nomenclature of Prokaryotes Short Title: ICNP (2008 Revision) Article Type: ICSP Minutes Section/Category: ICSP Matters Keywords: International Code of Prokaryotic Nomenclature; Rules; principles; general considerations; Judicial Commission; prokaryotic names Corresponding Author: George M Garrity, Sc.D. Michigan State University East Lansing, MI UNITED STATES First Author: Charles T Parker, B.Sc. Order of Authors: Charles T Parker, B.Sc. Brian J Tindall, Ph.D. George M Garrity, Sc.D. Manuscript Region of Origin: UNITED STATES Abstract: This volume contains the edition of the International Code of Nomenclature of Prokaryotes that was presented in draft form and available for comment at the Plenary Session of the Fourteenth International Congress of Bacteriology and Applied Microbiology (BAM), Montréal, 2014, together with updated lists of conserved and rejected bacterial names and of Opinions issued by the Judicial Commission. As in the past it brings together those changes accepted, published and documented by the ICSP and the Judicial Commission since the last revision was published. Several new appendices have been added to this edition. Appendix 11 addresses the appropriate application of the Candidatus concept, Appendix 12 contains the history of the van Niel Prize, and Appendix 13 contains the summaries of Congresses. Downloaded from www.microbiologyresearch.org by Powered by Editorial Manager® and ProduXionIP: 159.178.89.30 Manager® from Aries Systems Corporation On: Thu, 22 Jun 2017 13:58:02 ManuscriptClick Including here to download References Manuscript (Word document) Including References (Word document) ICNP_2008_Chapters_1-4_Final_20151119a.docx Prokaryotic Code (2008 Revision) ICSP Matters International Code of Nomenclature of Prokaryotes Prokaryotic Code (2008 Revision) Charles T. -
Actinobacillus Rossii Sp
INTERNATIONALJOURNAL OF SYSTEMATICBACTERIOLOGY, Apr. 1990, p. 148-153 Vol. 40, No. 2 0020-7713/90/020148-06$02.00/0 Copyright 0 1990, International Union of Microbiological Societies Actinobacillus rossii sp. nov., Actinobacillus seminis Spa nov. , noma rev., Pastewella bettii sp. nov. , Pasteurella lymphangitidis sp. nova, Pastewella mairi sp. nova,and Pasteurella tvehalosi Spa nova P. H. A. SNEATH1* AND M. STEVENS2 Department of Microbiology, Leicester University, Leicester LEI 7RH,’ and Public Health Laboratory, Leicester Royal InJirmary, Leicester LEI 5 WW,2England Evidence from numerical taxonomic analysis and DNA-DNA hybridization supports the proposal of new species in the genera Actinobacillus and Pasteurella. The following new species are proposed: Actinobacillus rossii sp. nov., from the vaginas of postparturient sows; Actinobacillus seminis sp. nov., nom. rev., associated with epididymitis of sheep; Pasteurella bettii sp. nov., associated with human Bartholin gland abscess and finger infections; Pasteurella lymphangitidis sp. nov. (the BLG group), which causes bovine lymphangitis; Pasteurella mairi sp. oov., which causes abortion in sows; and Pasteurella trehalosi sp. nov., formerly biovar T of Pasteurella haemolytica, which causes septicemia in older lambs. A recent numerical taxonomic study of the genera Acti- showed overlap values of less than 1% except for the nobacillus and Pasteurella (46) identified several phena that following pairs: Pasteurella multocida and Pasteurella canis have not yet been formally named. In this paper we describe (2.4%); P. multocida and Pasteurella stomatis (1.3%); P. six of these phena as new species, based on evidence that the canis and P. stomatis (2.2%); Pasteurella aerogenes and groups form statistically distinct phenotypic clusters and Pasteurella mairi (1.1%); and P. -
C G M 2 0 1 8 [0 4 on D Er Z O E K S R a Pp O
Update of the bacterial the of bacterial Update intaxonomy the classification lists of COGEM CGM 2018 - 04 ONDERZOEKSRAPPORT report Update of the bacterial taxonomy in the classification lists of COGEM July 2018 COGEM Report CGM 2018-04 Patrick L.J. RÜDELSHEIM & Pascale VAN ROOIJ PERSEUS BVBA Ordering information COGEM report No CGM 2018-04 E-mail: [email protected] Phone: +31-30-274 2777 Postal address: Netherlands Commission on Genetic Modification (COGEM), P.O. Box 578, 3720 AN Bilthoven, The Netherlands Internet Download as pdf-file: http://www.cogem.net → publications → research reports When ordering this report (free of charge), please mention title and number. Advisory Committee The authors gratefully acknowledge the members of the Advisory Committee for the valuable discussions and patience. Chair: Prof. dr. J.P.M. van Putten (Chair of the Medical Veterinary subcommittee of COGEM, Utrecht University) Members: Prof. dr. J.E. Degener (Member of the Medical Veterinary subcommittee of COGEM, University Medical Centre Groningen) Prof. dr. ir. J.D. van Elsas (Member of the Agriculture subcommittee of COGEM, University of Groningen) Dr. Lisette van der Knaap (COGEM-secretariat) Astrid Schulting (COGEM-secretariat) Disclaimer This report was commissioned by COGEM. The contents of this publication are the sole responsibility of the authors and may in no way be taken to represent the views of COGEM. Dit rapport is samengesteld in opdracht van de COGEM. De meningen die in het rapport worden weergegeven, zijn die van de auteurs en weerspiegelen niet noodzakelijkerwijs de mening van de COGEM. 2 | 24 Foreword COGEM advises the Dutch government on classifications of bacteria, and publishes listings of pathogenic and non-pathogenic bacteria that are updated regularly. -
Histophilus Ovislhaemophilus Somnus,' ' Haemophilus
INTERNATIONALJOURNAL OF SYSTEMATICBACTERIOLOGY, Jan. 1986, p. 1-7 Vol. 36, No. 1 0020-771 3 /86/0 10001 -07$02.00/0 Copyright 0 1986, International Union of Microbiological Societies Deoxyribonucleic Acid Relationships of “Histophilus ovislHaemophilus somnus,’ ’ Haemophilus haemoglobinophilus, and “Actinobacillus seminis” K. PIECHULLA,l R. MUTTERS,’ S. BURBACH,l R. KLUSSMEIER,’ S. POHL,2 AND W. MANNHEIM1* Zentrum fur Hygiene und Medizinische Mikrobiologie der Philipps- Universitat, Abteilung Bakteriologie, 0-3550Marburg,‘ and Hygiene-Institut der Ruprecht-Karls-Universitat,0-6900 Heidelberg,2 Federal Republic of Germany Three Australian isolates of “Histophilus ovis,?’ ten strains of “Haemophilus somnus” from North America, Australia, and Europe, and two American strains of “Haemophilus agni” were investigated by the deoxyribonucleic acid (DNA)-DNA hybridization (renaturation) method to determine their genetic interrela- tionships and their levels of relatedness to recognized wembers of the family Pasteurellaceae Pohl 1981. Our results confirmed that “Haemophilus somnus,” “Histophilus ovis,” and one of the “Haemophilus agni” strains studied represent one genetically homogeneous species. This species exhibited up to 41 % DNA relatedness to Haemophilus haemoglobinophilus, whereas only insignificant levels of relatedness or no measurable DNA binding was observed with the type species of the genera Actinobacillus, Haemophilus, and Pasteurella and with Haemophilus aphrophilus, Haemophilus ducreyi, Haemophilus paragallinarum, Haemophilus parainfluenzae, Haemophilus segnis, Pasteurella avium, Pasteurella ureae, and “Actinobucillus seminis. ” On the other hand, one of the “Haemophilus agni” strains studied (Hoerlein strain M650-1343) was included in the species “Acfinobacillus seminis” (DNA binding value, 91%). So far, only low levels of genetic relatedness with “Actinobacillus seminis” and currently recognized members of the family Pasteurellaceae have been detected. -
Phylogeny of 54 Representative Strains of Species in the Family Pasteurellaceae As Determined by Comparison of 16S Rrna Sequences FLOYD E
JOURNAL OF BACTERIOLOGY, Mar. 1992, p. 2002-2013 Vol. 174, No. 6 0021-9193/92/062002-12$02.00/0 Copyright X) 1992, American Society for Microbiology Phylogeny of 54 Representative Strains of Species in the Family Pasteurellaceae as Determined by Comparison of 16S rRNA Sequences FLOYD E. DEWHIRST,1* BRUCE J. PASTER,2 INGAR OLSEN,3 AND GAYLE J. FRASER1 Departments ofPhannacology1 and Microbiology,2 Forsyth Dental Center, Boston, Massachusetts 02115, and Department ofMicrobiology, Dental Faculty, University of Oslo, Oslo, Norway3 Received 3 September 1991/Accepted 14 January 1992 Virtually complete 16S rRNA sequences were determined for 54 representative strains of species in the family PasteureUlaceae. Of these strains, 15 were Pasteurella, 16 were ActinobaciUlus, and 23 were Haemophilus. A phylogenetic tree was constructed based on sequence similarity, using the Neighbor-Joining method. Fifty-three of the strains fell within four large clusters. The first cluster included the type strains of Haemophilus influenzae, H. aegyptius, H. aphrophilus, H. haemolyticus, H. paraphrophilus, H. segnis, and Actinobacilus actinomycetemcomitans. This cluster also contained A. actinomycetemcomitans FDC Y4, ATCC 29522, ATCC 29523, and ATCC 29524 and H. aphrophilus NCTC 7901. The second cluster included the type strains ofA. seminis and PasteureMa aerogenes and H. somnus OVCG 43826. The third cluster was composed of the type strains ofPasteureUla multocida, P. anatis, P. avium, P. canis, P. dagmatis, P. galinarum, P. langaa, P. stomatis, P. volantium, H. haemoglobinophilus, H. parasuis, H. paracuniculus, H. paragaUlinarum, and A. capsulatus. This cluster also contained PasteureUla species A CCUG 18782, Pasteurella species B CCUG 19974, Haemophilus taxon C CAPM 5111, H.