Direct Determination of Hydroxymethyl Conformations of Plant Cell Wall
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Embracing Bacterial Cellulose As a Catalyst for Sustainable Fashion
Running head: BACTERIAL CELLULOSE 1 Embracing Bacterial Cellulose as a Catalyst for Sustainable Fashion Luis Quijano A Senior Thesis submitted in partial fulfillment of the requirements for graduation in the Honors Program Liberty University Fall 2017 BACTERIAL CELLULOSE 2 Acceptance of Senior Honors Thesis This Senior Honors Thesis is accepted in partial fulfillment of the requirements for graduation from the Honors Program of Liberty University. ______________________________ Debbie Benoit, D.Min. Thesis Chair ______________________________ Randall Hubbard, Ph.D. Committee Member ______________________________ Matalie Howard, M.S. Committee Member ______________________________ David E. Schweitzer, Ph.D. Assistant Honors Director ______________________________ Date BACTERIAL CELLULOSE 3 Abstract Bacterial cellulose is a leather-like material produced during the production of Kombucha as a pellicle of bacterial cellulose (SCOBY) using Kombucha SCOBY, water, sugar, and green tea. Through an examination of the bacteria that produces the cellulose pellicle of the interface of the media and the air, currently named Komagataeibacter xylinus, an investigation of the growing process of bacterial cellulose and its uses, an analysis of bacterial cellulose’s properties, and a discussion of its prospects, one can fully grasp bacterial cellulose’s potential in becoming a catalyst for sustainable fashion. By laying the groundwork for further research to be conducted in bacterial cellulose’s applications as a textile, further commercialization of bacterial cellulose may become a practical reality. Keywords: Acetobacter xylinum, alternative textile, bacterial cellulose, fashion, Komagateibacter xylinus, sustainability BACTERIAL CELLULOSE 4 Embracing Bacterial Cellulose as a Catalyst for Sustainable Fashion Introduction One moment the fashionista is “in”, while the next day the fashionista is “out”. The fashion industry is typically known for its ever-changing trends, styles, and outfits. -
Multidimensional Solid-State NMR Spectroscopy of Plant Cell Walls
Solid State Nuclear Magnetic Resonance 78 (2016) 56–63' Contents lists available at ScienceDirect Solid State Nuclear Magnetic Resonance journal homepage: www.elsevier.com/locate/ssnmr Trends Multidimensional solid-state NMR spectroscopy of plant cell walls Tuo Wang, Pyae Phyo, Mei Hong n Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, United States article info abstract Article history: Plant biomass has become an important source of bio-renewable energy in modern society. The mole- Received 18 July 2016 cular structure of plant cell walls is difficult to characterize by most atomic-resolution techniques due to Received in revised form the insoluble and disordered nature of the cell wall. Solid-state NMR (SSNMR) spectroscopy is uniquely 9 August 2016 suited for studying native hydrated plant cell walls at the molecular level with chemical resolution. Accepted 12 August 2016 Significant progress has been made in the last five years to elucidate the molecular structures and in- Available online 13 August 2016 teractions of cellulose and matrix polysaccharides in plant cell walls. These studies have focused on Keywords: primary cell walls of growing plants in both the dicotyledonous and grass families, as represented by the Cellulose model plants Arabidopsis thaliana, Brachypodium distachyon, and Zea mays. To date, these SSNMR results Matrix polysaccharide have shown that 1) cellulose, hemicellulose, and pectins form a single network in the primary cell wall; Expansin 2) in dicot cell walls, the protein expansin targets the hemicellulose-enriched region of the cellulose Lignin fi Magic-angle spinning micro bril for its wall-loosening function; and 3) primary wall cellulose has polymorphic structures that Multidimensional correlation are distinct from the microbial cellulose structures. -
Chemists Find Binding Site of Protein That Allows Plant Growth 24 September 2013
Chemists find binding site of protein that allows plant growth 24 September 2013 Online Early Edition. Hong and Daniel Cosgrove, professor and holder of the Eberly Chair in Biology at Penn State University, are the lead authors. The research team also includes Tuo Wang, an Iowa State graduate student in chemistry and a graduate assistant for the Ames Laboratory; Linghao Zhong, an associate professor of chemistry at Penn State Mont Alto; Yong Bum Park, a post-doctoral scholar in biology at Penn State; plus Marc Caporini and Melanie Rosay of the Bruker BioSpin Corp. in Billerica, Mass. Three grants from the U.S. Department of Energy supported the research project. This illustration shows the parts of the expansin protein (magenta) that bind to the surface of specific regions of Iowa State's Hong has long used solid-state plant cell walls. Credit: Illustration courtesy of Mei nuclear magnetic resonance (NMR) spectroscopy Hong/Iowa State University. to study structural biology, including the mechanism used by the flu virus to infect host cells. But in this case, that technology wasn't sensitive enough to identify the binding site of the expansin protein. Using a new and super-sensitive instrument, researchers have discovered where a protein binds So the researchers – working with specialists from to plant cell walls, a process that loosens the cell the Bruker BioSpin Corp., a manufacturer of walls and makes it possible for plants to grow. scientific instruments – used a technology called dynamic nuclear polarization (DNP), to enhance the Researchers say the discovery could one day lead sensitivity of spectroscopy instruments. -
Cellulose Digestion and Metabolism Induced Biocatalytic Transitions in Anaerobic Microbial Ecosystems
Metabolites 2014, 4, 36-52; doi:10.3390/metabo4010036 OPEN ACCESS metabolites ISSN 2218-1989 www.mdpi.com/journal/metabolites/ Article Cellulose Digestion and Metabolism Induced Biocatalytic Transitions in Anaerobic Microbial Ecosystems Akira Yamazawa 1,2, Tomohiro Iikura 2, Yusuke Morioka 2, Amiu Shino 3, Yoshiyuki Ogata 4, Yasuhiro Date 2,3 and Jun Kikuchi 2,3,5,6,* 1 Research Planning and Management Group, Kajima Technical Research Institute, Kajima Corporation, 2-19-1 Tobitakyu, Chofu, Tokyo 182-0036, Japan; E-Mail: [email protected] 2 Graduate School of Medical Life Science, Yokohama City University, 1-7-29 Suehirocho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan; E-Mails: [email protected] (T.I.); [email protected] (Y.M.); [email protected] (Y.D.) 3 RIKEN Center for Sustainable Resource Science, 1-7-22 Suehirocho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan; E-Mail: [email protected] (A.S.) 4 Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Osaka 599-8531, Japan; E-Mail: [email protected] 5 Graduate School of Bioagricultural Sciences, Nagoya University, 1 Furo-cho, Chikusa-ku, Nagoya, Aichi 464-0810, Japan 6 RIKEN Biomass Engineering Program, 2-1 Hirosawa, Wako 351-0198, Japan * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +81-45-503-9439; Fax: +81-45-503-9489. Received: 13 September 2013; in revised form: 18 December 2013 / Accepted: 20 December 2013 / Published: 31 December 2013 Abstract: Anaerobic digestion of highly polymerized biomass by microbial communities present in diverse microbial ecosystems is an indispensable metabolic process for biogeochemical cycling in nature and for industrial activities required to maintain a sustainable society. -
Bacterial Cellulose - Properties and Its Potential Application (Bakteria Selulosa - Sifat Dan Keupayaan Aplikasi)
Sains Malaysiana 50(2)(2021): 493-505 http://dx.doi.org/10.17576/jsm-2021-5002-20 Bacterial Cellulose - Properties and Its Potential Application (Bakteria Selulosa - Sifat dan Keupayaan Aplikasi) IZABELA BETLEJ, SARANI ZAKARIA, KRZYSZTOF J. KRAJEWSKI & PIOTR BORUSZEWSKI* ABSTRACT This review paper is related to the utilization on bacterial cellulose in many applications. The polymer produced from bacterial cellulose possessed a very good physical and mechanical properties, such as high tensile strength, elasticity, absorbency. The polymer from bacterial cellulose has a significantly higher degree of polymerization and crystallinity compared to those derived from plant. The collection of selected literature review shown that bacterial cellulose produced are in the form pure cellulose and can be used in many of applications. These include application in various industries and sectors of the economy, from medicine to paper or electronic industry. Keywords: Acetobacter xylinum; biocomposites; culturing; properties of bacterial cellulose ABSTRAK Ulasan kepustakaan ini adalah mengenai bakteria selulosa yang digunakan dalam banyak aplikasi. Bahan polimer yang terhasil daripada bakteria selulosa mempunyai sifat fizikal dan mekanikal yang sangat baik seperti sifat kekuatan regangan, kelenturan dan serapan. Bahan polimer terhasil daripada selulosa bakteria mempunyai darjah pempolimeran dan kehabluran yang tinggi berbanding daripada sumber tumbuhan. Suntingan kajian daripada beberapa koleksi ulasan kepustakaan menunjukkan bakteria selulosa terhasil adalah selulosa tulen yang boleh digunakan untuk banyak kegunaan. Antaranya adalah untuk pelbagai industri dan sektor ekonomi seperti perubatan atau industri elektronik. Kata kunci: Acetobacter xylinum; komposit-bio; pengkulturan; sifat bakteria selulosa INTRODUCTION Yamada et al. 2012). The first reports on the synthesis of Cellulose is the most common polymer found in nature. -
Probing Membrane Protein Structure Using Water Polarization Transfer Solid-State NMR ⇑ Jonathan K
Journal of Magnetic Resonance 247 (2014) 118–127 Contents lists available at ScienceDirect Journal of Magnetic Resonance journal homepage: www.elsevier.com/locate/jmr Perspectives in Magnetic Resonance Probing membrane protein structure using water polarization transfer solid-state NMR ⇑ Jonathan K. Williams, Mei Hong Department of Chemistry, Iowa State University, Ames, IA 50011, United States article info abstract Article history: Water plays an essential role in the structure and function of proteins, lipid membranes and other bio- Received 9 June 2014 logical macromolecules. Solid-state NMR heteronuclear-detected 1H polarization transfer from water Revised 10 August 2014 to biomolecules is a versatile approach for studying water–protein, water–membrane, and water–carbo- Available online 25 August 2014 hydrate interactions in biology. We review radiofrequency pulse sequences for measuring water polari- zation transfer to biomolecules, the mechanisms of polarization transfer, and the application of this Keywords: method to various biological systems. Three polarization transfer mechanisms, chemical exchange, spin Chemical exchange diffusion and NOE, manifest themselves at different temperatures, magic-angle-spinning frequencies, Spin diffusion and pulse irradiations. Chemical exchange is ubiquitous in all systems examined so far, and spin diffusion Ion channels Influenza M2 protein plays the key role in polarization transfer within the macromolecule. Tightly bound water molecules with Heteronuclear correlation long residence times are rare in proteins at ambient temperature. The water polarization-transfer tech- nique has been used to study the hydration of microcrystalline proteins, lipid membranes, and plant cell wall polysaccharides, and to derive atomic-resolution details of the kinetics and mechanism of ion con- duction in channels and pumps. -
Annual Symposium Program
rd 33 Annual Symposium Program June 30 - July 3, 2019 www.proteinsociety.org Table of Contents 2 Welcome 3 Program Planning Committee Mission 4 Committees The Protein Society is a not-for-profi t scholarly society 7 Corporate Support with a mission to advance state-of-the-art science through international forums that promote commu- 8 Registration nication, cooperation, and collaboration among scientists involved in the study of proteins. 9 Hotel Floor Plan For 33 years, The Protein Society has served as the in- 11 Posters tellectual home of investigators across all disciplines - and from around the world - involved in the study 12 General Information of protein structure, function, and design. The Soci- ety provides forums for scientifi c collaboration and 16 2019 Protein Society Award Winners communication and supports professional growth of young investigators through workshops, networking 22 Travel Awards opportunities, and by encouraging junior research- ers to participate fully in the Annual Symposium. In 24 At-A-Glance addition to our Symposium, the Society’s prestigious journal, Protein Science, serves as an ideal platform 28 Program to further the science of proteins in the broadest sense possible. 42 Exhibitor List and Directory 52 Poster Presentation Schedule 66 Abstracts: TPS Award Winners & Invited Speakers #PS33 90 Posters 1986 - 2019 1 Welcome Program Planning Committee Welcome to Seattle and to the 2019 33rd Annual Sym- posium of the Protein Society! Seattle | June 30 - July 3, 2019 We are excited to bring you this year’s Annual Sym- posium comprising 12 exceptional scientifi c sessions that cover a wide range of scientifi c achievement in the fi eld of protein science, as well as a Nobel Laureate Lecture from 2017 Chemistry Nobel Laure- ate Richard Henderson. -
Characterization of the Bacterial Cellulose Dissolved on Dimethylacetamide/Lithium Chloride
CHARACTERIZATION OF THE BACTERIAL CELLULOSE DISSOLVED ON DIMETHYLACETAMIDE/LITHIUM CHLORIDE Gláucia de Marco Lima 1, Maria Rita Sierakowski 2, Paula C. S. Faria-Tischer 2, Cesar. A. Tischer 2* 1PMCF-Mestrado em Ciências Farmacêuticas, UNIVALI, ZIP 88302-202 - Itajaí-SC, Brazil 2BIOPOL-Biopolymers Lab. Biopolímeros ZIP 81531-990, PoBox 19081 - Curitiba-PR, Brazil – [email protected] Palavras-chave : Celulose bacteriana, Acetobacter xylinum, Dimetilacetamida, cloreto de lítio, Ressonância Magnética Nuclear,difração de raio-X. Characterization of the bacterial cellulose dissolved on dimethylacetamide/lithium chloride The main barrier to the use of cellulose is his insolubility on water or organic solvents, but derivates can be obtained with the use of ionic solvents. Bacterial cellulose, is mainly produced by the bacterium Acetobacter xylinum , and is identical to the plant, but free of lignin and hemicellulose, and with several unique physical-chemical properties. Cellulose produced in a 4 % glucose medium with static condition was dissoluted on heated DMAc/LiCl (120 °C, 150 °C or 170 °C). The product of dissolved cellulose was observed with 13 C-nmr and the effect on crystalline state was seen with x-ray crystallography. The crystalline structure was lost in the dissolution, becoming an amorphous structure, as well as Avicel . The process of dissolution of the bacterial cellulose is basics for the analysis of these water insoluble polymer, facilitating the analysis of these composites, by 13 C-NMR spectroscopy, size exclusion chromatography and light scattering techniques. Keywords : Bacterial Cellulose, Acetobacter xylinum, Dimethylacetamide, lithium chloride, Nuclear Magnetic Resonance, X-ray diffraction. Introduction Bacterial cellulose is a homo-polysaccharide formed for glucose molecules with β-(1-4) linkages 1 that can be produced with different substrates and acquire the format of the recipient that contains it 2. -
Bacterial Cellulose: a Versatile Biopolymer for Wound Dressing Applications
bs_bs_banner Minireview Bacterial cellulose: a versatile biopolymer for wound dressing applications Raquel Portela,1 Catarina R. Leal,2,3 Pedro L. acquire antibacterial response and possible local Almeida2,3,**† and Rita G. Sobral1,*† drug delivery features. Due to its intrinsic versatility, 1Laboratory of Molecular Microbiology of Bacterial BC is the perfect example of a biotechnological Pathogens, UCIBIO@REQUIMTE, Departamento de response to a clinical problem. In this review, we Ciencias^ da Vida, Faculdade de Ciencias^ e Tecnologia, assess the BC main features and emphasis is given Universidade Nova de Lisboa, 2829-516 Caparica, to a specific biomedical application: wound dress- Portugal. ings. The production process and the physical– 2Area Departamental de Fısica, ISEL - Instituto Superior chemical properties that entitle this material to be de Engenharia de Lisboa, Instituto Politecnico de used as wound dressing namely for burn healing are Lisboa, Rua Conselheiro Emıdio Navarro 1, P-1959-007 highlighted. An overview of the most common BC Lisboa, Portugal. composites and their enhanced properties, in partic- 3CENIMAT/I3N, Departamento de Ciencia^ dos Materiais, ular physical and biological, is provided, including Faculdade Ciencias^ e Tecnologia, Universidade Nova de the different production processes. A particular Lisboa, 2829-516 Caparica, Portugal. focus is given to the biochemistry and genetic manipulation of BC. A summary of the current mar- keted BC-based wound dressing products is pre- Summary sented, and finally, future perspectives for the usage of BC as wound dressing are foreseen. Although several therapeutic approaches are avail- able for wound and burn treatment and much pro- gress has been made in this area, room for Introduction improvement still exists, driven by the urgent need Cellulose is the most abundant naturally occurring poly- of better strategies to accelerate wound healing and mer obtained from renewable sources. -
Structure and Dynamics of Influenza M2 Proton Channels from Solid-State NMR By
Structure and Dynamics of Influenza M2 Proton Channels from Solid-State NMR by Venkata Shiva Mandala B.A. Biochemistry Oberlin College, 2015 Submitted to the Department of Chemistry in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY at the MASSACHUSETTS INSTITUTE OF TECHNOLOGY February 2021 ©2020 Massachusetts Institute of Technology. All rights reserved. Signature of Author _____________________________________________________________ Department of Chemistry September 28, 2020 Certified by ____________________________________________________________________ Mei Hong Professor of Chemistry Thesis Supervisor Accepted by ___________________________________________________________________ Adam P. Willard Associate Professor of Chemistry Graduate Officer This doctoral thesis has been examined by a committee of professors from the Department of Chemistry as follows: ______________________________________________________________________________ Matthew D. Shoulders Whitehead Career Development Associate Professor Thesis Committee Chair ______________________________________________________________________________ Mei Hong Professor of Chemistry Thesis Supervisor ______________________________________________________________________________ Robert G. Griffin Arthur Amos Noyes Professor of Chemistry Thesis Committee Member 2 Structure and Dynamics of Influenza M2 Proton Channels from Solid-State NMR by Venkata Shiva Mandala Submitted to the Department of Chemistry on October 9, 2020 in Partial Fulfillment of the -
A Short & Sweet Story Of
Iowa State University Capstones, Theses and Graduate Theses and Dissertations Dissertations 2014 A short & sweet story of CHO Marilu G. Dick-Perez Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/etd Part of the Analytical Chemistry Commons, and the Physical Chemistry Commons Recommended Citation Dick-Perez, Marilu G., "A short & sweet story of CHO" (2014). Graduate Theses and Dissertations. 13987. https://lib.dr.iastate.edu/etd/13987 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. A short & sweet story of CHO by Marilú G. Dick-Pérez A dissertation submitted to the graduate faculty in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Major: Chemistry Program of Study Committee: Theresa L. Windus, Co-Major Professor Mei Hong, Co-Major Professor Mark S Gordon Thomas Holme Emily Smith Iowa State University Ames, Iowa 2014 Copyright ©Marilu G. Dick-Perez, 2014. All rights reserved. ii TABLE OF CONTENTS ACKNOWLEDGMENTS ............................................................................................................. iv ABSTRACT ............................................................................................................................... -
Production of Cellulose and Profile Metabolites by Fermentation Of
1 Biological and Applied Sciences Vol.61: e18160696, 2018 BRAZILIAN ARCHIVES OF http://dx.doi.org/10.190/1678-4324-2018160696 ISSN 1678-4324 Online Edition BIOLOGY AND TECHNOLOGY A N I N T E R N A T I O N A L J O U R N A L Production of Cellulose and Profile Metabolites by Fermentation of Glycerol by Gluconacetobacter Xylinus 1 1 1* Francielle Lina Vidotto , Geovana Piveta Ribeiro , Cesar Augusto Tischer . 1 Universidade Estadual de Londrina – UEL – Departamento de Bioquímica e Biotecnologia – CCE, Londrina, Paraná, Brasil. ABSTRACT Because of the widespread occurrence of cellulose in nature, many organisms use glycerol as a source of carbon and energy, so these organisms have drawn attention to the potential use of glycerol bioconversion. The bacteria Gluconacetobacter xylinus, a strictly aerobic strain that performing incomplete oxidation of various sugars and alcohols to cellulose biosynthesis. For this reason, we modify the Hestrim-Schram medium, associating glycerol, glucose and sucrose varying their concentration. The fermentations were performed statically at a temperature of 28˚C for a period of 10 days. The pH, membrane formation, crystallinity and the production of some metabolites of the 4 th, 7th and 10 th days was evaluated. The results showed a higher yield of membrane in the medium containing glucose, gly 1 + glu2 on 10 fermentation of 3.5 g %. Through solid -state NMR gave the crystallinity of the membranes, where there was a clear trend toward higher crystallinity membranes with 7 days of fermentation. Metabolic products found in the media by analysis of NMR spectroscopy in liquid were similar, especially for the production of alanine and lactate that were present in all media.