Apoptosis Induced by Proteasome Inhibition in Cancer Cells: Predominant Role of the P53/PUMA Pathway

Total Page:16

File Type:pdf, Size:1020Kb

Apoptosis Induced by Proteasome Inhibition in Cancer Cells: Predominant Role of the P53/PUMA Pathway Oncogene (2007) 26, 1681–1692 & 2007 Nature Publishing Group All rights reserved 0950-9232/07 $30.00 www.nature.com/onc ORIGINAL ARTICLE Apoptosis induced by proteasome inhibition in cancer cells: predominant role of the p53/PUMA pathway CG Concannon1, BF Koehler1,2, Claus Reimertz2, BM Murphy1, C Bonner1, N Thurow2, MW Ward1, AVillunger 3, AStrasser 4,DKo¨ gel2,5 and JHM Prehn1,5 1Department of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin, Ireland; 2Experimental Neurosurgery, Centre for Neurology and Neurosurgery, Johann Wolfgang Goethe University Clinics, Theodor-Stern-Kai 7, Frankfurt/Main, Germany; 3Division of Experimental Pathophysiology and Immunology, Biocenter, Innsbruck Medical University, Innsbruck, Austria and 4The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia The proteasome has emerged as a novel target for Introduction antineoplastic treatment of hematological malignancies and solid tumors, including those of the central nervous The correct functioning of the ubiquitin-proteasome system. To identify cell death pathways activated in pathway is essential for the degradation of the majority response to inhibition of the proteasome system in cancer of intracellular proteins. Several key regulatory proteins cells, we treated human SH-SY5Y neuroblastoma cells involved in cell proliferation and differentiation are with the selective proteasome inhibitor (PI) epoxomicin regulated by proteasome-mediated proteolysis resulting (Epoxo). Prolonged exposure to Epoxo was associated in the activation or inhibition of specific cell signaling with increased levels of poly-ubiquitinylated proteins and pathways (Adams, 2004a). The proteasome is also p53, release of cytochrome c from the mitochondria, and central to the regulation of cell death and apoptosis. activation of caspases. Analysis of global gene expression The proapoptotic Bcl-2 family proteins Bim, Bik and using high-density oligonucleotide microarrays revealed Bid, which regulate the release of proapoptotic factors that Epoxo triggered transcriptional activation of the two such as cytochrome c and Smac from mitochondria, are Bcl-2-homology domain-3-only (BH3-only) genes p53 known substrates for targeted ubiquitination and upregulated modulator of apoptosis (PUMA) and Bim. degradation (Breitschopf et al., 2000; Marshansky Subsequent studies in PUMA- and Bim-deficient cells et al., 2001; Ley et al., 2003). Indeed, caspases, the key indicated that Epoxo-induced caspase activation and proteases activated during apoptosis, are also regulated apoptosis was predominantly PUMA-dependent. Further by the proteasome. An endogenous caspase inhibitor characterization of the transcriptional response to Epoxo family of proteins, the inhibitor of apoptosis (IAPs), not in HCT116 human colon cancer cells demonstrated that only inhibit active caspases but also target them for PUMA induction was p53-dependent; with deficiency in destruction by acting as ubiquitin ligases and promoting either p53 or PUMA significantly protected HCT116 polyubiquitination of activate caspases (Huang et al., cells against Epoxo-induced apoptosis. Our data suggest 2000; Suzuki et al., 2001). that p53 activation and the transcriptional induction of In recent years modulation of proteasomal function its target gene PUMA play an important role in with specific inhibitors has evolved as a novel target for the sensitivity of cancer cells to apoptosis induced by the treatment of cancers such as multiple myeloma proteasome inhibition, and imply that antineoplastic (Chauhan et al., 2005) as well as lung, colon and therapies with PIs might be especially useful in cancers prostate cancer (Aghajanian et al., 2002; Papandreou with functional p53. et al., 2004; Chauhan et al., 2005). Proteasome Oncogene (2007) 26, 1681–1692. doi:10.1038/sj.onc.1209974; inhibitors (PIs) have been demonstrated to overcome published online 18 September 2006 chemoresistance of tumor cells by enhancing chemo- sensitivity and even acting in synergy with other agents Keywords: proteasome; apoptosis; epoxomicin; Bcl-2 to induce apoptotic cell death of tumor cells (Adams, family; BH3-only protein; p53 2002; Park and Lenz, 2004). Indeed, clinical efficiency of Bortezomib (PS-341/Velcade), a reversible PI has recently been observed in multiple myeloma patients (Richardson et al., 2003). Inhibitors with a broader Correspondence: Professor JHM Prehn, Department of Physiology specificity and irreversible binding have likewise been and Medical Physics, Royal College of Surgeons in Ireland, 123 identified and are currently being tested in preclinical St Stephen’s Green, Dublin 2, Ireland. trials (Melino, 2005). One such inhibitor is epoxomicin E-mail: [email protected] 0 0 5These authors share equal senior authorship. (Epoxo), a naturally found a , b epoxyketone peptide, Received 29 March 2006; revised 27 July 2006; accepted 1 August 2006; which is a highly selective and irreversible inhibitor of published online 18 September 2006 the chymotryptic-, tryptic- and post-glutamyl peptidyl PUMA and proteasome inhibition induced apoptosis CG Concannon et al 1682 hydrolytic-like activities of the proteasome (Meng et al., Results 1999), and was first identified and isolated from a species of actinomycetes on the basis of its antitumor activity Inhibition of proteasome function using Epoxo induces (Hanada et al., 1992). Unlike several widely used PIs, caspase activity and apoptosis Epoxo is highly specific for the proteasome without To investigate the ability of Epoxo to inhibit proteaso- affecting the activity of other non-proteasomal pro- mal activity and induce apoptosis in human SH-SY5Y teases including calpain, trypsin and cathepsin B (Meng neuroblastoma cells we treated cells with 50 nM Epoxo et al., 1999). for varying time periods. Western blot analysis of mono- In addition to the post-translational modification and poly-ubiquitinylated proteins demonstrated a time- of proapoptotic proteins, inhibition of proteasomal dependent increase in the levels of ubiquitinylated function may also regulate several transcription-depen- proteins, characteristic of proteasome dysfunction and dent processes. Indeed, the activity of several transcrip- stress, especially following 16 and 24 h treatment with tion factors, including p53 and nuclear factor kappa B 50 nM Epoxo (Figure 1a). The increased levels of (NF-kB) (Chowdary et al., 1994; Palombella et al., ubiquitinylated proteins was followed by an activation 1994), are known to be modulated by proteasome of DEVDase activity, indicative of the activation of activity. This study was undertaken to analyse the the effector caspases -3 and -7 during this process underlying transcriptional mechanisms leading to (Figure 1b). Epoxo also led to the release of cytochrome apoptosis triggered by inhibition of the proteasome c from mitochondria (Figure 1c) and increased levels of system in cancer cells. Our data demonstrates apoptosis as detected by annexin V binding (Figure 1d). that although the two Bcl-2-homology domain 3-only Further analysis using Hoechst staining revealed con- (BH3-only) genes p53 upregulated modulator of apoptosis densation and fragmentation of most nuclei. Coincu- (PUMA) and Bim are transcriptionally activated by bation with the pan-caspase inhibitor, zVAD.fmk, proteasome inhibition, p53-dependent activation of inhibited these nuclear morphological changes indicat- PUMAplays a predominant role in this type of cell ing that caspases are critically involved in proteasome death. inhibition-induced apoptosis (Figure 1e). Figure 1 Epoxo induces proteasomal stress and apoptosis in human SH-SY5Y neuroblastoma cells. (a) Increase in the level of ubiquitinylated proteins following Epoxo treatment. SH-SY5Y cells were treated with vehicle (DMSO) for 24 h or Epoxo (50 nM) for the indicated time periods. Whole-cell lysates were analysed by Western blotting. Membranes were probed with an antibody recognizing mono- or poly-ubiquitinylated proteins. a-Tubulin served as a loading control. Similar results were obtained in two separate experiments. (b) Time course of Epoxo induced caspase-3 like activity. SH-SY5Y cells were treated with vehicle (DMSO) for 24 h or Epoxo (50 nM) for indicated time periods. Following treatment cells were harvested and whole-cell lysate prepared and used to monitor caspase-3 like activity by measuring cleavage of the fluorogenic substrate Ac-DEVD-AMC (10 mM). Data are means7s.e. from n ¼ 3 separate experiments. Different from control (Con): *, Po0.05. (c) Immunofluoresence showing the redistribution of cytochrome c from mitochondria following treatment with 50 nM Epoxo for 24 h. (d) Quantification of cells undergoing apoptosis following treating with 50 nM Epoxo for the indicated time periods. Cells were stained with using Annexin V-FITC and PI and analysed by flow cytometry. (e) Hoechst staining of SH-SY5Y cells treated with DMSO, Epoxo (50 nM) with or without or pre-treatment with zVAD.fmk (100 mM). Condensation and fragmentation of the nuclear chromatin is clearly evident in the Epoxo-treated cells. Oncogene PUMA and proteasome inhibition induced apoptosis CG Concannon et al 1683 Microarray analysis of transcriptional response to Table 1 (continued ) proteasome inhibition by Epoxo Target genes Affymetrix Up/down- In an effort to identify apoptotic pathways involved in accession no. regulated Epoxo-induced cell death we utilized high-density microarrays to investigate the transcriptional changes NAG-1 (TGF-beta occurring after Epoxo treatment. A16
Recommended publications
  • Figure S1. DMD Module Network. the Network Is Formed by 260 Genes from Disgenet and 1101 Interactions from STRING. Red Nodes Are the Five Seed Candidate Genes
    Figure S1. DMD module network. The network is formed by 260 genes from DisGeNET and 1101 interactions from STRING. Red nodes are the five seed candidate genes. Figure S2. DMD module network is more connected than a random module of the same size. It is shown the distribution of the largest connected component of 10.000 random modules of the same size of the DMD module network. The green line (x=260) represents the DMD largest connected component, obtaining a z-score=8.9. Figure S3. Shared genes between BMD and DMD signature. A) A meta-analysis of three microarray datasets (GSE3307, GSE13608 and GSE109178) was performed for the identification of differentially expressed genes (DEGs) in BMD muscle biopsies as compared to normal muscle biopsies. Briefly, the GSE13608 dataset included 6 samples of skeletal muscle biopsy from healthy people and 5 samples from BMD patients. Biopsies were taken from either biceps brachii, triceps brachii or deltoid. The GSE3307 dataset included 17 samples of skeletal muscle biopsy from healthy people and 10 samples from BMD patients. The GSE109178 dataset included 14 samples of controls and 11 samples from BMD patients. For both GSE3307 and GSE10917 datasets, biopsies were taken at the time of diagnosis and from the vastus lateralis. For the meta-analysis of GSE13608, GSE3307 and GSE109178, a random effects model of effect size measure was used to integrate gene expression patterns from the two datasets. Genes with an adjusted p value (FDR) < 0.05 and an │effect size│>2 were identified as DEGs and selected for further analysis. A significant number of DEGs (p<0.001) were in common with the DMD signature genes (blue nodes), as determined by a hypergeometric test assessing the significance of the overlap between the BMD DEGs and the number of DMD signature genes B) MCODE analysis of the overlapping genes between BMD DEGs and DMD signature genes.
    [Show full text]
  • A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
    Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated.
    [Show full text]
  • Porcine DNAJB6 Promotes PCV2 Replication Via Enhancing The
    Han et al. Vet Res (2020) 51:61 https://doi.org/10.1186/s13567-020-00783-z RESEARCH ARTICLE Open Access Porcine DNAJB6 promotes PCV2 replication via enhancing the formation of autophagy in host cells Cong Han†, Qian Du†, Lei Zhu, Nannan Chen, Le Luo, Qiao Chen, Jiatong Yin, Xingchen Wu, Dewen Tong* and Yong Huang* Abstract Hsp40/DnaJ family proteins play important roles in the infection process of various viruses. Porcine DNAJB6 (pDNAJB6) is a major member of this family, but its role in modulating the replication of porcine circovirus type 2 (PCV2) is still unclear. In the present study, pDNAJB6 was found to be signifcantly upregulated by PCV2 infection, and confrmed to be interacted with PCV2 capsid (Cap) protein and co-localized at both cytoplasm and nucleus in the PCV2-infected cells. Knockout of pDNAJB6 signifcantly reduced the formation of autophagosomes in PCV2-infected cells or in the cells expressing Cap protein, whereas overexpression of pDNAJB6 showed an opposite efect. In addi- tion, the domain mapping assay showed that the J domain of pDNAJB6 (amino acids (aa) 1–99) and the C terminus of Cap (162-234 aa) were required for the interaction of pDNAJB6 with Cap. Notably, the interaction of pDNAJB6 with Cap was very important to promoting the formation of autophagosomes induced by PCV2 infection or Cap expression and enhancing the replication of PCV2. Taken together, the results presented here show a novel function of pDNAJB6 in regulation of porcine circovirus replication that pDNAJB6 enhances the formation of autophagy to promote viral replication through interacting with viral capsid protein during PCV2 infection.
    [Show full text]
  • FOXP1 Acts Through a Negative Feedback Loop to Suppress FOXO-Induced Apoptosis
    Cell Death and Differentiation (2013) 20, 1219–1229 & 2013 Macmillan Publishers Limited All rights reserved 1350-9047/13 www.nature.com/cdd FOXP1 acts through a negative feedback loop to suppress FOXO-induced apoptosis R van Boxtel1,5, C Gomez-Puerto1,6, M Mokry2,6, A Eijkelenboom3, KE van der Vos1, EES Nieuwenhuis2, BMT Burgering3, EW-F Lam4 and PJ Coffer*,1,2 Transcriptional activity of Forkhead box transcription factor class O (FOXO) proteins can result in a variety of cellular outcomes depending on cell type and activating stimulus. These transcription factors are negatively regulated by the phosphoinositol 3-kinase (PI3K)–protein kinase B (PKB) signaling pathway, which is thought to have a pivotal role in regulating survival of tumor cells in a variety of cancers. Recently, it has become clear that FOXO proteins can promote resistance to anti-cancer therapeutics, designed to inhibit PI3K–PKB activity, by inducing the expression of proteins that provide feedback at different levels of this pathway. We questioned whether such a feedback mechanism may also exist directly at the level of FOXO-induced transcription. To identify critical modulators of FOXO transcriptional output, we performed gene expression analyses after conditional activation of key components of the PI3K–PKB–FOXO signaling pathway and identified FOXP1 as a direct FOXO transcriptional target. Using chromatin immunoprecipitation followed by next-generation sequencing, we show that FOXP1 binds enhancers that are pre-occupied by FOXO3. By sequencing the transcriptomes of cells in which FOXO is specifically activated in the absence of FOXP1, we demonstrate that FOXP1 can modulate the expression of a specific subset of FOXO target genes, including inhibiting expression of the pro-apoptotic gene BIK.
    [Show full text]
  • Weihl 234Th Workshop Report Weihl
    Workshop Report 234th ENMC International Workshop: Chaperone dysfunction in muscle disease December 8-10th 2017, Naarden, Netherlands Conrad C. Weihl1, Bjarne Udd2, Michael Hanna3 on behalf of the Workshop Participants 1 Department of Neurology, Washington University School of Medicine, Saint Louis, MO USA 2 Tampere Neuromuscular Center and Folkhalsan Genetic Institute, Helsinki, Finland 3 UCL Institute of Neurology, Queen Square, London, UK 1. Introduction: Twenty participants from Australia, Belgium, Denmark, Finland, France, Germany, Italy, Israel, The Netherlands, Sweden, UK and the USA met in Naarden, The Netherlands from December 8th-10th, 2017. This group included clinicians, clinical trialists, basic scientists, industry and patient representatives. Patients were represented by the Muscular Dystrophy Association and Alexander’s Way (BAG3 associated myopathy). The goals were to discuss the role of protein chaperones in normal muscle function, muscle disease and future therapies. Protein chaperones are a class of proteins that participate in facilitating the proper folding and assembly of protein complexes. Thus, chaperones are essential for the development and maintenance of skeletal muscle. Specifically this large group of proteins ensures that other proteins (client proteins) maintain proper structure and function or if needed, facilitates their degradation via proteolytic pathways. Chaperone dysfunction is responsible for many rare hereditary myopathies; thus correcting chaperone function may be a therapeutic option. The participants reported on various aspects of the involvement of chaperones in a large variety of muscle diseases and disease processes, ranging from primary defects in chaperone genes such as DNAJB6, BAG3 and HSPB8, to the involvement of chaperones in the larger group of myofibrillar and rimmed vacuolar myopathies including sporadic inclusion body myositis (sIBM), and beyond.
    [Show full text]
  • The HSP70 Chaperone Machinery: J Proteins As Drivers of Functional Specificity
    REVIEWS The HSP70 chaperone machinery: J proteins as drivers of functional specificity Harm H. Kampinga* and Elizabeth A. Craig‡ Abstract | Heat shock 70 kDa proteins (HSP70s) are ubiquitous molecular chaperones that function in a myriad of biological processes, modulating polypeptide folding, degradation and translocation across membranes, and protein–protein interactions. This multitude of roles is not easily reconciled with the universality of the activity of HSP70s in ATP-dependent client protein-binding and release cycles. Much of the functional diversity of the HSP70s is driven by a diverse class of cofactors: J proteins. Often, multiple J proteins function with a single HSP70. Some target HSP70 activity to clients at precise locations in cells and others bind client proteins directly, thereby delivering specific clients to HSP70 and directly determining their fate. In their native cellular environment, polypeptides are participates in such diverse cellular functions. Their constantly at risk of attaining conformations that pre- functional diversity is remarkable considering that vent them from functioning properly and/or cause them within and across species, HSP70s have high sequence to aggregate into large, potentially cytotoxic complexes. identity. They share a single biochemical activity: an Molecular chaperones guide the conformation of proteins ATP-dependent client-binding and release cycle com- throughout their lifetime, preventing their aggregation bined with client protein recognition, which is typi- by protecting interactive surfaces against non-productive cally rather promiscuous. This apparent conundrum interactions. Through such inter actions, molecular chap- is resolved by the fact that HSP70s do not work alone, erones aid in the folding of nascent proteins as they are but rather as ‘HSP70 machines’, collaborating with synthesized by ribosomes, drive protein transport across and being regulated by several cofactors.
    [Show full text]
  • Drosophila and Human Transcriptomic Data Mining Provides Evidence for Therapeutic
    Drosophila and human transcriptomic data mining provides evidence for therapeutic mechanism of pentylenetetrazole in Down syndrome Author Abhay Sharma Institute of Genomics and Integrative Biology Council of Scientific and Industrial Research Delhi University Campus, Mall Road Delhi 110007, India Tel: +91-11-27666156, Fax: +91-11-27662407 Email: [email protected] Nature Precedings : hdl:10101/npre.2010.4330.1 Posted 5 Apr 2010 Running head: Pentylenetetrazole mechanism in Down syndrome 1 Abstract Pentylenetetrazole (PTZ) has recently been found to ameliorate cognitive impairment in rodent models of Down syndrome (DS). The mechanism underlying PTZ’s therapeutic effect is however not clear. Microarray profiling has previously reported differential expression of genes in DS. No mammalian transcriptomic data on PTZ treatment however exists. Nevertheless, a Drosophila model inspired by rodent models of PTZ induced kindling plasticity has recently been described. Microarray profiling has shown PTZ’s downregulatory effect on gene expression in fly heads. In a comparative transcriptomics approach, I have analyzed the available microarray data in order to identify potential mechanism of PTZ action in DS. I find that transcriptomic correlates of chronic PTZ in Drosophila and DS counteract each other. A significant enrichment is observed between PTZ downregulated and DS upregulated genes, and a significant depletion between PTZ downregulated and DS dowwnregulated genes. Further, the common genes in PTZ Nature Precedings : hdl:10101/npre.2010.4330.1 Posted 5 Apr 2010 downregulated and DS upregulated sets show enrichment for MAP kinase pathway. My analysis suggests that downregulation of MAP kinase pathway may mediate therapeutic effect of PTZ in DS. Existing evidence implicating MAP kinase pathway in DS supports this observation.
    [Show full text]
  • A Genome-Scale Protein Interaction Profile of Drosophila P53
    A genome-scale protein interaction profile of Drosophila p53 uncovers additional nodes of the human p53 network Andrea Lunardia,b,1, Giulio Di Minina,b,1, Paolo Proveroc, Marco Dal Ferroa,b, Marcello Carottia,b, Giannino Del Sala,b, and Licio Collavina,b,2 aLaboratorio Nazionale Consorzio Interuniversitario per le Biotecnologie (LNCIB), Area Science Park, 34012 Trieste, Italy; bDipartimento di Scienze della Vita, Università degli Studi di Trieste, 34129 Trieste, Italy; and cMolecular Biotechnology Center and Dipartimento di Genetica, Biologia e Biochimica, Università degli Studi di Torino, 10126 Torino, Italy Communicated by Marc W. Kirschner, Harvard Medical School, Boston, MA, March 2, 2010 (received for review June 9, 2009) The genome of the fruitfly Drosophila melanogaster contains a single to better understand the functions of all members of the p53 family p53-like protein, phylogenetically related to the ancestor of the mam- in mammals. malian p53 family of tumor suppressors. We reasoned that a compre- hensive map of the protein interaction profile of Drosophila p53 Results (Dmp53) might help identify conserved interactions of the entire Small Pool in Vitro Expression Cloning (IVEC) Screen for Drosophila p53 family in man. Using a genome-scale in vitro expression cloning p53 Interactors. The Drosophila Gene Collection (DGC) comprises approach, we identified 91 previously unreported Dmp53 interactors, full-length annotated cDNAs of the majority of known genes in considerably expanding the current Drosophila p53 interactome. D. melanogaster (16). Clones from DGC1.0 and DGC2.0 were pu- Looking for evolutionary conservation of these interactions, we rified and pooled in groups of 24. Recombinant maltose binding tested 41 mammalian orthologs and found that 37 bound to one or protein (MBP)-Dmp53 fusion protein was prepared from Bacu- more p53-family members when overexpressed in human cells.
    [Show full text]
  • Prognostic and Functional Significant of Heat Shock Proteins (Hsps)
    biology Article Prognostic and Functional Significant of Heat Shock Proteins (HSPs) in Breast Cancer Unveiled by Multi-Omics Approaches Miriam Buttacavoli 1,†, Gianluca Di Cara 1,†, Cesare D’Amico 1, Fabiana Geraci 1 , Ida Pucci-Minafra 2, Salvatore Feo 1 and Patrizia Cancemi 1,2,* 1 Department of Biological Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, 90128 Palermo, Italy; [email protected] (M.B.); [email protected] (G.D.C.); [email protected] (C.D.); [email protected] (F.G.); [email protected] (S.F.) 2 Experimental Center of Onco Biology (COBS), 90145 Palermo, Italy; [email protected] * Correspondence: [email protected]; Tel.: +39-091-2389-7330 † These authors contributed equally to this work. Simple Summary: In this study, we investigated the expression pattern and prognostic significance of the heat shock proteins (HSPs) family members in breast cancer (BC) by using several bioinfor- matics tools and proteomics investigations. Our results demonstrated that, collectively, HSPs were deregulated in BC, acting as both oncogene and onco-suppressor genes. In particular, two different HSP-clusters were significantly associated with a poor or good prognosis. Interestingly, the HSPs deregulation impacted gene expression and miRNAs regulation that, in turn, affected important bio- logical pathways involved in cell cycle, DNA replication, and receptors-mediated signaling. Finally, the proteomic identification of several HSPs members and isoforms revealed much more complexity Citation: Buttacavoli, M.; Di Cara, of HSPs roles in BC and showed that their expression is quite variable among patients. In conclusion, G.; D’Amico, C.; Geraci, F.; we elaborated two panels of HSPs that could be further explored as potential biomarkers for BC Pucci-Minafra, I.; Feo, S.; Cancemi, P.
    [Show full text]
  • Characterization of the Dual Functional Effects of Heat Shock Proteins (Hsps
    Zhang et al. Genome Medicine (2020) 12:101 https://doi.org/10.1186/s13073-020-00795-6 RESEARCH Open Access Characterization of the dual functional effects of heat shock proteins (HSPs) in cancer hallmarks to aid development of HSP inhibitors Zhao Zhang1†, Ji Jing2†, Youqiong Ye1, Zhiao Chen1, Ying Jing1, Shengli Li1, Wei Hong1, Hang Ruan1, Yaoming Liu1, Qingsong Hu3, Jun Wang4, Wenbo Li1, Chunru Lin3, Lixia Diao5*, Yubin Zhou2* and Leng Han1* Abstract Background: Heat shock proteins (HSPs), a representative family of chaperone genes, play crucial roles in malignant progression and are pursued as attractive anti-cancer therapeutic targets. Despite tremendous efforts to develop anti-cancer drugs based on HSPs, no HSP inhibitors have thus far reached the milestone of FDA approval. There remains an unmet need to further understand the functional roles of HSPs in cancer. Methods: We constructed the network for HSPs across ~ 10,000 tumor samples from The Cancer Genome Atlas (TCGA) and ~ 10,000 normal samples from Genotype-Tissue Expression (GTEx), and compared the network disruption between tumor and normal samples. We then examined the associations between HSPs and cancer hallmarks and validated these associations from multiple independent high-throughput functional screens, including Project Achilles and DRIVE. Finally, we experimentally characterized the dual function effects of HSPs in tumor proliferation and metastasis. Results: We comprehensively analyzed the HSP expression landscape across multiple human cancers and revealed a global disruption of the co-expression network for HSPs. Through analyzing HSP expression alteration and its association with tumor proliferation and metastasis, we revealed dual functional effects of HSPs, in that they can simultaneously influence proliferation and metastasis in opposite directions.
    [Show full text]
  • DNAJB6 Chaperones PP2A Mediated Dephosphorylation of GSK3&Beta
    Oncogene (2012) 31, 4472–4483 & 2012 Macmillan Publishers Limited All rights reserved 0950-9232/12 www.nature.com/onc ORIGINAL ARTICLE DNAJB6 chaperones PP2A mediated dephosphorylation of GSK3b to downregulate b-catenin transcription target, osteopontin A Mitra1, ME Menezes1, LK Pannell1, MS Mulekar2, RE Honkanen3, LA Shevde1 and RS Samant1 1Department of Oncologic Sciences, Mitchell Cancer Institute, University of South Alabama, Mobile, AL, USA; 2Department of Mathematics and Statistics, University of South Alabama, Mobile, AL, USA and 3Department of Biochemistry and Molecular Biology, University of South Alabama, Mobile, AL, USA Elevated levels of the oncoprotein, osteopontin (OPN), Introduction are associated with poor outcome of several types of cancers including melanoma. We have previously reported The human genome codes for more than 40 distinct an important involvement of DNAJB6, a member of heat- heat-shock protein 40 (HSP40) (DNAJ) members (Mitra shock protein 40 (HSP40) family, in negatively impacting et al., 2009). A typical DNAJ protein is characterized by tumor growth. The current study was prompted by our a J domain, a glycine-Phenylalanine (G/F) domain and observations reported here which revealed a reciprocal a C-terminal domain. Depending on the presence of relationship between DNAJB6 and OPN in melanoma these domains, this family is divided into Type I, Type II specimens. The ‘J domain’ is the most conserved domain and Type III (also known as DNAJ A, B and C) types of HSP40 family of proteins. Hence, we assessed the (Ohtsuka and Hata, 2000). The J domain consists of functional role of the J domain in activities of DNAJB6.
    [Show full text]
  • DNAJB6 Suppresses Alpha-Synuclein Induced Pathology in an Animal Model of Parkinson’S Disease
    DNAJB6 Suppresses Alpha-synuclein Induced Pathology in an Animal Model of Parkinson’s Disease Sertan Arkan Lund University https://orcid.org/0000-0003-2581-5620 Mårten Ljungberg Lund University: Lunds Universitet Deniz Kirik Lund University: Lunds Universitet Christian Hansen ( [email protected] ) Lund University https://orcid.org/0000-0002-2891-6876 Research article Keywords: Protein homeostasis, Parkinson`s Disease, Alpha-synuclein, Adeno Associated Virus, DNAJB6, Heat Shock Protein 70 Posted Date: November 24th, 2020 DOI: https://doi.org/10.21203/rs.3.rs-112939/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License DNAJB6 suppresses alpha-synuclein induced pathology in an animal model of Parkinson’s Disease 1 1 2 1 Sertan Arkan , Mårten Ljungberg , Deniz Kirik and Christian Hansen 1Lund University, Molecular Neurobiology, Department of Experimental Medical Science, BMC B11, 221 84, Lund, Sweden. 2Brain Repair and Imaging in Neural Systems, Department of Experimental Medical Science, Lund University, BMC D11, Lund 22184, Sweden Sertan Arkan: [email protected] Mårten Ljungberg: må[email protected] Deniz Kırık: [email protected] Correspondence should be addressed to Christian Hansen ([email protected]) Abstract Background: α-synuclein (α-syn) aggregation can lead to degeneration of dopaminergic neurons in the substantia nigra pars compacta (SNpc) as invariably observed in patients with Parkinson’s Disease (PD). The co-chaperone DNAJB6 has previously been found to be expressed at higher levels in PD patients than in control subjects and was also found in Lewy bodies. Our previous experiments showed that knock out of DNAJB6 induced α-syn aggregation in cellular level.
    [Show full text]