TDA: Lecture 2 Complexes and filtrations Wesley Hamilton University of North Carolina - Chapel Hill
[email protected] 02/05/20 1 / 89 1 Complexes Simplicial complexes Cubical complexes 2 Filtrations 3 From data to filtrations Vietoris-Rips filtrations Sub/superlevel set filtrations Alpha shapes 2 / 89 Complexes Complexes Complexes are the combinatorial building blocks used in TDA. The two types of complexes we'll focus on are simplicial complexes and cubical complexes. Simplicial complexes are easier to \construct" with, and more common in algebraic topology. Cubical complexes are better adapted to image/pixelated/voxel data. 3 / 89 Complexes Simplicial complexes Simplices A geometric n-simplex σ is the set ( n ) X X σ = ai ei : ai = 1; ai ≥ 0 ; i=0 i n where the ei are standard basis vectors for R . 4 / 89 Complexes Simplicial complexes Examples of simplices, dim 0 and 1 5 / 89 Complexes Simplicial complexes Examples of simplices, dim 2 and 3 6 / 89 Complexes Simplicial complexes Simplices and barycentric coordinates Given an n-simplex σ, we can specify points within σ using barycentric coordinates: n X (a0; :::; a1) 7! ai ei 2 σ: i=0 7 / 89 The jth face of a simplex σ is the set @j σ. Complexes Simplicial complexes Faces and facets The face maps @j , defined on n-simplexes, are the restriction of a simplex σ's barycentric coordinates to aj = 0, i.e. n X X @j σ = f ai ei : ai = 1; ai ≥ 0; aj = 0g: i=0 i 8 / 89 Complexes Simplicial complexes Faces and facets The face maps @j , defined on n-simplexes, are the restriction of a simplex σ's barycentric coordinates to aj = 0, i.e.