Otomys Laminatus – Laminate Vlei Rat
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Freshwater Fishes
WESTERN CAPE PROVINCE state oF BIODIVERSITY 2007 TABLE OF CONTENTS Chapter 1 Introduction 2 Chapter 2 Methods 17 Chapter 3 Freshwater fishes 18 Chapter 4 Amphibians 36 Chapter 5 Reptiles 55 Chapter 6 Mammals 75 Chapter 7 Avifauna 89 Chapter 8 Flora & Vegetation 112 Chapter 9 Land and Protected Areas 139 Chapter 10 Status of River Health 159 Cover page photographs by Andrew Turner (CapeNature), Roger Bills (SAIAB) & Wicus Leeuwner. ISBN 978-0-620-39289-1 SCIENTIFIC SERVICES 2 Western Cape Province State of Biodiversity 2007 CHAPTER 1 INTRODUCTION Andrew Turner [email protected] 1 “We live at a historic moment, a time in which the world’s biological diversity is being rapidly destroyed. The present geological period has more species than any other, yet the current rate of extinction of species is greater now than at any time in the past. Ecosystems and communities are being degraded and destroyed, and species are being driven to extinction. The species that persist are losing genetic variation as the number of individuals in populations shrinks, unique populations and subspecies are destroyed, and remaining populations become increasingly isolated from one another. The cause of this loss of biological diversity at all levels is the range of human activity that alters and destroys natural habitats to suit human needs.” (Primack, 2002). CapeNature launched its State of Biodiversity Programme (SoBP) to assess and monitor the state of biodiversity in the Western Cape in 1999. This programme delivered its first report in 2002 and these reports are updated every five years. The current report (2007) reports on the changes to the state of vertebrate biodiversity and land under conservation usage. -
A Palaeoecological and Taphonomic Analysis of the Micromammals from a Marine Isotope Stage 5 Layer at Klasies River, Southern Cape, South Africa
A PALAEOECOLOGICAL AND TAPHONOMIC ANALYSIS OF THE MICROMAMMALS FROM A MARINE ISOTOPE STAGE 5 LAYER AT KLASIES RIVER, SOUTHERN CAPE, SOUTH AFRICA. By: Nompumelelo Maringa 717230 Supervisor: Prof Sarah Wurz Co-Supervisor: Dr Jerome Reynard A dissertation submitted to the Faculty of Science, University of the Witwatersrand, Johannesburg, 2020, in fulfilment of the requirements for the degree of Master of Science. DIVISION OF ARCHAEOLOGY SCHOOL OF GEOGRAPHY, ARCHAEOLOGY AND ENVIRONMENTAL STUDIES. Declaration I declare that this dissertation is my own, unaided work. It is being submitted for the Degree of Master of Science in the University of the Witwatersrand, Johannesburg. It has not been submitted before for any degree or examination at any other University. Name: Nompumelelo Maringa Student number: 717230 Date: 6 July 2020 Signature: i Abstract This research investigated the palaeoecology at Klasies River main site during Marine Isotope Stage 5d by analysing the micromammal remains excavated from the BOS Three layer in Cave 1 during the 2017 excavation season. During this time, Cave 1 was inhabited by anatomically modern humans with complex modern behaviour. The taphonomic analysis shows that light and moderate digestion on the cranials and post-cranials are common, with the majority of specimens displaying moderate breakage. These modifications are associated with Tyto alba (Barn owl) and Bubo africanus (Spotted eagle-owl) as the accumulators of the assemblage. Encrustation and soil staining are the most prevalent post-depositional modifications in both cranial and post-cranial assemblages. This relates to the presence of tufa, speleothem material and the presence of water. The taxonomic analysis on the cranial elements (mandibles, maxillae and teeth) identified the most prominent species as Otomys irroratus (Southern African vlei rat), Myosorex varius (Forest shrew) and Crocidura flavescens (Greater red musk shrew). -
Scale, Pattern and Process in Biological Invasions
SCALE, PATTERN, AND PROCESS IN BIOLOGICAL INVASIONS By CRAIG R. ALLEN A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 1997 Copyright 1997 by Craig R. Allen ACKNOWLEDGEMENTS The work presented in this dissertation would not have been possible without the cooperation and encouragement of many. Foremost is the understanding of my immediate family, that is my wife Patty and now three-year-old son, Reece. Reece, while generally confused about what I was doing, nonetheless supported my effort to "write a book" in order to become a "doctor." Conflicts arose only when he needed my computer for dinosaur games. My co-advisors, W. M. Kitchens and C. S. Holling, encouraged my investigations and provided me with intellectual support and opportunity. For the same reasons, I extend my appreciation to my committee members, S. Humphrey, M. Moulton and D. Wojcik. Numerous friends and colleagues provided me with intellectual support and acted as a sounding board for ideas. Foremost are E. A. Forys, G. Peterson M. P. Moulton and J. Sendzemir as well as the entire "gang" of the Arthur Marshal Ecology Laboratory. I wish to thank all for their support and friendship. II! TABLE OF CONTENTS page ACKNOWLEDGEMENTS iii ABSTRACT viii INTRODUCTION 1 CHAPTERS 1. TRADITIONAL HYPOTHESES: INVASIONS AND EXTINCTIONS IN THE EVERGLADES ECOREGION 5 Introduction 5 Body-mass difference hypothesis 6 Diet difference hypothesis 7 Species replacement hypothesis 7 Phylogenetic hypothesis 8 Methods 8 Results 11 Discussion 14 2. LUMPY PATTERNS OF BODY MASS PREDICT INVASIONS AND EXTINCTIONS IN TRANSFORMING LANDSCAPES 18 Introduction 18 Methods and analysis 21 Species lists 21 Analysis 22 Results 26 Discussion 31 3. -
Conservation Assessment of South African Mammals
University of Pretoria etd – Keith, M (2005) Conservation assessment of South African mammals by Mark Keith Submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy (Zoology) In the Faculty of Natural & Agricultural Sciences University of Pretoria January 2005 University of Pretoria etd – Keith, M (2005) Conservation assessment of South African mammals Tables of Contents Content Page Abstract i Acknowledgements iii Disclaimer iv CHAPTER 1: General Introduction 1 CHAPTER 2: Regional IUCN Red List assessments for South African terrestrial and marine mammals: An overview 24 CHAPTER 3: Incorporating measures of anthropogenic threat in regional conservation assessments: A case study based on South African mammals 51 CHAPTER 4: Conservation priority-setting at a regional scale: a case study based on South African terrestrial mammals 85 CHAPTER 5: Taxonomic and phylogenetic distinctiveness in regional conservation assessments: A case study based on extant South African Chiroptera and Carnivora 115 CHAPTER 6: The Orange List: a safety net for biodiversity in South Africa 141 CHAPTER 7: Revisiting Green Data Species Lists 151 CHAPTER 8: Conclusion and a synopsis of the conservation assessment of South African 158 mammals APPENDIX 1: Regional IUCN Red List assessments for South African terrestrial and marine 170 mammals: An overview APPENDIX 2: Incorporating measures of anthropogenic threat in regional conservation assessments: A case study based on South African mammals 183 APPENDIX 3: The Orange List: a safety net for biodiversity in South Africa 192 i University of Pretoria etd – Keith, M (2005) Conservation assessment of South African mammals Abstract Conservation assessment of South African mammals Student: Mark Keith Supervisors: Prof. -
The Ecology of Large-Spotted Genets Within an Urban Landscape and to Determine What Factors Facilitate Their Ability to Persist in an Urban Environment
i The ecology of large-spotted genets within an urban landscape Craig D. Widdows Submitted in fulfilment of the academic requirements for the degree of Doctor of Philosophy In the Discipline of Ecological Sciences School of Life Sciences College of Agriculture, Science and Engineering University of KwaZulu-Natal Pietermaritzburg Campus 2015 i ABSTRACT Urbanization is one of the most damaging and rapidly expanding forms of anthropogenic landscape modification and is having profound consequences on biodiversity worldwide. The global increase in urbanization has resulted in exclusion of many carnivore species from human- altered landscapes due to a variety of anthropogenic impacts. However, despite the negative impacts of urbanization on carnivores, certain species such as large-spotted genets (Genetta tigrina) exhibit an ability to persist within urban areas. Despite their extensive distribution range, large-spotted genets are poorly studied in comparison to other African carnivores, with a handful of studies conducted on genetics, activity patterns and diet. Furthermore, no studies have focused on their ecology in an urban environment. There have been increasing reports of large-spotted genets within urban areas throughout KwaZulu-Natal, South Africa. The mosaic of patches of native vegetation within this urban landscape provides habitats for a variety of wildlife species. The main aim of the study was to investigate the ecology of large-spotted genets within an urban landscape and to determine what factors facilitate their ability to persist in an urban environment. Residential interviews were conducted to ascertain information pertaining to behavioural observations, land use as well as wildlife conflict and public perceptions of genets. Chi-square (2) goodness-of-fit tests were used to determine significant differences in the frequency of responses. -
Karoo Bush Rat
Otomys unisulcatus – Karoo Bush Rat threats that could cause widespread population decline. However, there are potentially synergistic effects of climate change drying up wetlands and overgrazing/ browsing removing at least part of the plant food and cover that this species relies upon. Such effects on subpopulation trends and population distribution should be monitored. Regional population effects: This species is endemic to the assessment region. Its dispersal abilities are not well known. Subpopulations seem to be patchily distributed at the landscape level, according to the presence of favourable habitats. While it is likely that movements and possibly rescue effects exist between subpopulations, Emmanuel Do Linh San others might be physically and genetically isolated. Regional Red List status (2016) Least Concern Distribution National Red List status (2004) Least Concern This species occurs throughout the semi-arid Succulent Reasons for change No change Karoo and Nama-Karoo of South Africa (Monadjem et al. 2015), specifically in the Eastern, Northern and Western Global Red List status (2016) Least Concern Cape provinces, with some limited occurrence in the TOPS listing (NEMBA) (2007) None Fynbos Biome (Vermeulen & Nel 1988; Figure 1). It may marginally occur in southern Namibia but further surveys CITES listing None are required to confirm this. Regardless, the bulk of the Endemic Yes population occurs in South Africa. Kerley and Erasmus (1992) argued that the lodges built by this species are In southern Africa the Karoo Bush Rat vulnerable to destruction by fire. As a result, they is the only rodent that constructs and occupies hypothesised that this shelter-building strategy is only large, dome-shaped stick nests or “lodges”, viable in the absence of frequent burning, and therefore it generally at the base of bushes. -
The Effects of Fire Regime on Small Mammals In
The Effects of Fire Regime on Small Mammals Abstract: Small mammal species richness, abundance and biomass were determined in repre- in S.W. Cape Montane Fynbos (Cape sentative S.W. Cape montane fynbos habitats of 1 Macchia various post-fire ages, and in riverine and rocky outcrop habitats respectively too wet and too poorly vegetated to burn. In fynbos the para- 2 meters measured displayed bimodal distributions, K. Willan and R. C. Bigalke with early (2,4 years) and late (38 years) peaks and intervening troughs (10-14 years). Correla- tions with plant succession are discussed. In comparison with other ecotypes, recolonisation of burns by small mammals occurs more slowly in fynbos. Species richness, abundance and biomass of small mammals was consistently higher in riverine habitats than on rocky outcrops. The former may serve as major sources of recolonisa- tion after fire. There is no published information on the sites in each area which were analogous to sites effects of fire on small mammals in fynbos in other areas. In this way area effects although ecosystem dynamics cannot be fully resulting from differences in aspect, slope, understood without knowledge of these effects. rockiness and proximity to surface water were more Three studies have been undertaken (Toes 1972; or less eliminated. Unavoidable variation Lewis In prep; Bigalke and Repier, Unpubl.),and occurred in season, altitude and vegetation Bond and others (1980) commented on potential floristics and physiognomy. In the 2-14—year-old fire effects in the Southern Cape mountains. The areas, trapping sites included vegetation present pilot study took place in S.W. -
The Cryptic Case of Otomys Sloggetti (Sloggett's Vlei Rat)
The cryptic case of Otomys sloggetti (Sloggett’s AUTHORS: Thalassa Matthews1 vlei rat): Interpreting murid molar morphology in Turid H. Nel2 the fossil record AFFILIATIONS: 1Centre of Excellence in Palaeosciences, Iziko Museums of South Africa, Cape Town, Vlei rats (Family: Muridae; Subfamily: Otomyinae) have a widespread distribution in southern Africa. They South Africa 2SFF Centre for Early Sapiens are favoured prey of barn and spotted eagle owls, and frequently become associated with archaeological Behaviour (SapienCE), University of deposits when the owls roost in cave sites. The phylogeny of several Otomyinae species is enigmatic, Bergen, Bergen, Norway and Otomys sloggetti (Sloggett’s vlei rat) is no exception. This species has been referred to as the ‘ice rat’ CORRESPONDENCE TO: and present distribution ranges are seemingly limited to mountainous areas, at high altitude, in Lesotho, Thalassa Matthews Drakensberg and the Karoo. It was thus surprising and unexpected when specimens closely resembling Otomys sloggetti (identification was based on molar morphology) were found in several archaeological EMAIL: sites on the south and west coasts of South Africa, and also in modern owl pellet assemblages – all [email protected] extralimital to the current reported distribution. However, further examination of and comparison between DATES: these specimens, as well as extensive differences observed between comparative Otomys sloggetti Received: 10 Sep. 2019 specimens from museum collections, highlighted potential problems associated with the common Revised: 01 June 2020 Accepted: 17 July 2020 practice of using tooth morphology to identify fossil murid species. We identified six molar morphotypes Published: 29 Jan. 2021 from the fossil and modern material, all of which bore a morphological resemblance to O. -
Otomys Auratus – Vlei Rat
Otomys auratus – Vlei Rat Assessment Rationale This near-endemic grassland species is becoming increasingly threatened by grassland contraction and wetland loss, with niche modelling showing that it will undergo a 47–61% reduction in suitable habitat between 1975 and 2050 from climate change (6–8% per decade). Already one major subpopulation, that of the Soutpansberg Mountains, Limpopo Province, has been completely replaced at a key contact zone by the savannah species O. angoniensis over the past 90 years due to thicket habitats replacing grasslands. Ongoing grassland and wetland loss, primarily from agricultural and Ara Monadjem settlement expansion, may synergise with climate change to accelerate area of occupancy (AOO) reduction. Since this species is localised to montane grassland patches, it Regional Red List status (2016) Near Threatened A4c* is more sensitive to habitat loss as it probably cannot National Red List status (2004) Not Evaluated utilise modified habitats. Nationally, there has been 32.8% decline in natural wetlands from 1990–2013/14, which is a Genuine change Reasons for change combination of both genuine wetland loss through Global Red List status Not Evaluated anthropogenic activities and the generally drier conditions currently than in 1990. Specifically, most distribution None TOPS listing (NEMBA) (2007) records (36%) are located in the Mesic Highveld CITES listing None Grassland Bioregion, where there has been a 19% loss of moist grasslands since 1990 (A. Skowno unpubl. data). In Endemic Near KwaZulu-Natal specifically, there was a loss of 7.6% of the *Watch-list Threat natural habitat between 2005 and 2011 (1.3% per annum), which, when extrapolated, equates to a 13% loss of Over the past 90 years (1923 to 2015), O. -
Trophic Ecology of Rusty-Spotted Genet Genetta Maculata and Slender
Trophic ecology of rusty-spotted genet Genetta maculata and slender mongoose Herpestes sanguineus in Telperion Nature Reserve, with a focus on dietary segregation as a possible mechanism of coexistence By Julia Zemouche 595534 A dissertation submitted in fulfilment of the requirements for the degree of MASTER OF SCIENCE (ZOOLOGY) in the School of Animal, Plant and Environmental Sciences at the University of the Witwatersrand 2018 Supervisor: Dr Zimkitha Madikiza Co-supervisors: Prof. Emmanuel Do Linh San (UFH) Dr W. Maartin Strauss (UNISA) Declaration I, Julia Zemouche (595534), hereby declare that this dissertation is my own unaided work. It is being submitted for the Degree of Master of Science at the University of the Witwatersrand, Johannesburg. It has not been submitted before for any degree or examination at any other university. Signature: ________________________________ 29/05/2018 i Acknowledgements First and foremost, I would like to acknowledge my supervisor, Dr Kim Madikiza, and co- supervisors, Prof. Emmanuel Do Linh San and Dr Maartin Strauss. You have provided endless support and guidance throughout this study, for which I am incredibly grateful. Your assistance in the field was always welcome and I learned a great deal from all of you. I would also like to thank the Oppenheimer family for allowing me to conduct my research at Telperion Nature Reserve. Special thanks go out to the various staff at Telperion who always made my visits pleasant and assisted me on many occasions. Ms. Rouxlyn Roux and Ms. Diana Moyo also deserve a special mention for assisting me with fieldwork and providing me with company. -
Chapter 15 the Mammals of Angola
Chapter 15 The Mammals of Angola Pedro Beja, Pedro Vaz Pinto, Luís Veríssimo, Elena Bersacola, Ezequiel Fabiano, Jorge M. Palmeirim, Ara Monadjem, Pedro Monterroso, Magdalena S. Svensson, and Peter John Taylor Abstract Scientific investigations on the mammals of Angola started over 150 years ago, but information remains scarce and scattered, with only one recent published account. Here we provide a synthesis of the mammals of Angola based on a thorough survey of primary and grey literature, as well as recent unpublished records. We present a short history of mammal research, and provide brief information on each species known to occur in the country. Particular attention is given to endemic and near endemic species. We also provide a zoogeographic outline and information on the conservation of Angolan mammals. We found confirmed records for 291 native species, most of which from the orders Rodentia (85), Chiroptera (73), Carnivora (39), and Cetartiodactyla (33). There is a large number of endemic and near endemic species, most of which are rodents or bats. The large diversity of species is favoured by the wide P. Beja (*) CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal CEABN-InBio, Centro de Ecologia Aplicada “Professor Baeta Neves”, Instituto Superior de Agronomia, Universidade de Lisboa, Lisboa, Portugal e-mail: [email protected] P. Vaz Pinto Fundação Kissama, Luanda, Angola CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Campus de Vairão, Vairão, Portugal e-mail: [email protected] L. Veríssimo Fundação Kissama, Luanda, Angola e-mail: [email protected] E. -
Otomys Irroratus – Southern African Vlei Rat
Otomys irroratus – Southern African Vlei Rat lato, the two can be distinguished on morphological and molecular grounds (Taylor et al. 2011). Assessment Rationale Listed as Least Concern because it is widespread within the Fynbos Biome of the Western Cape and Eastern Cape, it is present in several protected areas, and has a degree of tolerance for modified habitats. However, the population is expected to show slow declines in the future from climate change, with niche modelling showing that it will undergo a 12–24% reduction in area of occupancy between 1975 and 2050 from climate change. Similarly, Cliff & Suretha Dorse continued habitat loss of wetlands and associated vegetation will lead to a decline in the future. In the Western Cape, already 31% of all wetlands (plus a 32 m Regional Red List status (2016) Least Concern* buffer) and riparian habitats have been lost to agricultural National Red List status (2004) Least Concern expansion. Thus, while we infer that the population is not threatened currently, it should be monitored as it may Reasons for change No change qualify for a threatened category in the future. Key Global Red List status (2008) Least Concern interventions for this species include the conservation and restoration of wetlands and holistic management TOPS listing (NEMBA) (2007) None strategies to curb habitat degradation from overgrazing. CITES listing None Endemic Yes Distribution *Watch-list Threat Otomys species are generally associated with mesic grasslands and moorlands within alpine, montane and Climate change is projected to decrease the sub-montane regions of Southern, Central, East and West range of this species by 12–24% by 2050, which Africa (Monadjem et al.