Defining the Role of Chemical Activity in Environmental Risk Assessment Within the Context of Mode of Action: Practical Guidance and Advice
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The Role of Omics in the Application of Adverse Outcome Pathways for Chemical Risk Assessment Erica K
TOXICOLOGICAL SCIENCES, 158(2), 2017, 252–262 doi: 10.1093/toxsci/kfx097 Advance Access Publication Date: May 19, 2017 Forum FORUM The Role of Omics in the Application of Adverse Outcome Pathways for Chemical Risk Assessment Erica K. Brockmeier,* Geoff Hodges,†,1 Thomas H. Hutchinson,‡ Emma Butler,† Markus Hecker,§ Knut Erik Tollefsen,¶ Natalia Garcia-Reyero,k,kj Peter Kille,kk Do¨ rthe Becker,# Kevin Chipman,# John Colbourne,# Timothy W. Collette,** Andrew Cossins,* Mark Cronin,†† Peter Graystock,a Steve Gutsell,† Dries Knapen,b Ioanna Katsiadaki,c Anke Lange,d Stuart Marshall,† Stewart F. Owen,e Edward J. Perkins,k Stewart Plaistow,* Anthony Schroeder,f Daisy Taylor,g Mark Viant,# Gerald Ankley,h and Francesco Falciani* *Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK; †Safety and Environmental Assurance Centre, Unilever, Colworth Science Park, Sharnbrook MK44 1LQ, UK; ‡School of Biological Sciences, University of Plymouth, Plymouth, Devon PL4 8AA, UK; §Toxicology Centre and School of the Environment and Sustainability, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5B3, Canada; ¶Norwegian Institute for Water Research (NIVA), N-0349 Oslo, Norway; kUS Army Engineer Research and Development Center, Vicksburg, Mississippi; kjMississippi State University, Institute for Genomics, Biocomputing and Biotechnology, Starkville, Mississippi; kkCardiff School of Biosciences, University of Cardiff, Cardiff CF10 3AT, UK; #School of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK; -
In Vitro Assessment of Modes of Toxic Action of Pharmaceuticals In
Environ. Sci. Technol. 2005, 39, 3090-3100 photosynthesis inhibition assay, agreement between In Vitro Assessment of Modes of experimental results and prediction was best for two- Toxic Action of Pharmaceuticals in stage predictions considering the assigned modes of action. In a two-stage prediction, concentration addition was Aquatic Life used as a model to predict the mixture effect of the baseline toxicants followed by their independent action as a BEATE I. ESCHER,* NADINE BRAMAZ, single component combined with the specifically acting RIK I. L. EGGEN, AND compound propranolol and the reference compound diuron. MANUELA RICHTER A comparison with acute toxicity data for algae, daphnia, Swiss Federal Institute for Environmental Science and and fish showed generally good agreement for the Technology (EAWAG), CH-8600 DuÈbendorf, Switzerland nonspecifically acting compounds but also that the proposed test battery offered better diagnostic value in the case of the specifically acting compounds. An ecotoxicological test battery based on a mode-of- action approach was designed and applied to the hazard identification and classification of modes of action of Introduction six pharmaceuticals (carbamazepine, diclofenac, ethinyl Pharmaceuticals and their metabolites are ubiquitous in the estradiol, ibuprofen, propranolol, and sulfamethoxazole). The environment. Most of them are neither truly persistent nor rationale behind the design of the battery was to cover highly bioaccumulative and many, but not all, are quite well the relevant interactions that a compound may have with eliminated in wastewater treatment plants. However, they biological targets. It is thus not comprehensive but are continuously emitted into the wastewater streams and contains representative examples of each category of therefore contribute to the burden of chemical pollutants mode of toxic action including nonspecific, specific, and even though their concentrations in receiving water are quite reactive toxicity. -
Quantification of the Membrane Toxicity of Hydrophobic Ionogenic Organic Compounds (Hiocs): Role of Uptake and Speciation for Single Compounds and Binary Mixtures
Diss. ETH No. 14066 Quantification of the membrane toxicity of hydrophobic ionogenic organic compounds (HIOCs): Role of uptake and speciation for single compounds and binary mixtures René W. Hunziker Zürich, 2001 Diss. ETH No. 14066 Quantification of the membrane toxicity of hydrophobic ionogenic organic compounds (HIOCs): Role of uptake and speciation for single compounds and binary mixtures A dissertation submitted to the Swiss Federal Institute of Technology Zürich for the degree of Doctor of Natural Sciences Presented by René W. Hunziker Dipl. Natw. ETH born October 10th, 1968 citizen of Moosleerau (AG) Accepted on the recommendation of Prof. Dr. R.P. Schwarzenbach, examiner Prof. Dr. U.P. Fringeli, co-examiner Dr. R. Altenburger, co-examiner Dr. B.I. Escher, co-examiner Zürich, 2001 Table of contents Summary............................................................................................................................................. VII Zusammenfassung............................................................................................................................ IX 1. General introduction................................................................................................................... 1 1.1 Biomembranes as site of toxic action................................................................................. 2 1.2 Membrane toxicity of hydrophobic ionogenic organic compounds (HIOC) .............. 4 1.3 Objectives.............................................................................................................................. -
Molecular Mechanisms in Ecotoxicology
CHEMISTRY AT EA WAG 915 CHIMIA 5/ (1997) Nr. 12 (Dczcmher) Chimia 51 (1997) 915-921 standing of underlying molecular mecha- © Neue Schweizerische Chemische Gesellschaft nisms and modes of toxic action on differ- lSSN 0009-4293 ent levels of biological organization, while the other trend is aimed at understanding the complex interactions and feedback Molecular Mechanisms in mechanisms in ecosystems disturbed by pollutants. Taken together, these two ap- Ecotoxicology: An Interplay proaches complement each other and will finally enhance the understanding of the between Environmental effects of pollutants on living systems. In this paper, we focus on the mode-of-ac- Chemistry and Biology tion-based molecular approach. C 3 Beate I. Escher3)*, Renata Behrab), Rik I.L. Eggen ), and Karl Fent ) 2. Ecotoxicology at EA WAG Fig. 1 shows an overview of the pro- Abstract. A close collaboration between environmental chemistry and biological cesses considered in the molecular ap- sciences is required for a complete understanding of ecotoxicological effects. Bioavail- proach to ecotoxicology. Emphasis is ability and uptake of pollutants cannot be regarded as isolated chemical or biological placed on the importance of understand- questions. Knowledge of the effective concentrations in the organism or at the target ing the interplay between environmental site(s) is essential to link the fate and effects of a chemical and is a prerequisite for chemistry and toxicology, thereby linking quantitative investigation of the modes of toxic action. These modes of action need to the concepts of bioavailability, effective be unraveled using whole-organism or in vitro systems in order to be able to develop concentration in the organisms or at the specific biomarkers and biosensors that can be applied as early warning systems. -
Molecular Mechanisms in Ecotoxicology: an Interplay
CHEMISTRY AT EA WAG 915 CHIMIA 5/ (1997) Nr. 12 (Dczcmher) Chimia 51 (1997) 915-921 standing of underlying molecular mecha- © Neue Schweizerische Chemische Gesellschaft nisms and modes of toxic action on differ- lSSN 0009-4293 ent levels of biological organization, while the other trend is aimed at understanding the complex interactions and feedback Molecular Mechanisms in mechanisms in ecosystems disturbed by pollutants. Taken together, these two ap- Ecotoxicology: An Interplay proaches complement each other and will finally enhance the understanding of the between Environmental effects of pollutants on living systems. In this paper, we focus on the mode-of-ac- Chemistry and Biology tion-based molecular approach. C 3 Beate I. Escher3)*, Renata Behrab), Rik I.L. Eggen ), and Karl Fent ) 2. Ecotoxicology at EA WAG Fig. 1 shows an overview of the pro- Abstract. A close collaboration between environmental chemistry and biological cesses considered in the molecular ap- sciences is required for a complete understanding of ecotoxicological effects. Bioavail- proach to ecotoxicology. Emphasis is ability and uptake of pollutants cannot be regarded as isolated chemical or biological placed on the importance of understand- questions. Knowledge of the effective concentrations in the organism or at the target ing the interplay between environmental site(s) is essential to link the fate and effects of a chemical and is a prerequisite for chemistry and toxicology, thereby linking quantitative investigation of the modes of toxic action. These modes of action need to the concepts of bioavailability, effective be unraveled using whole-organism or in vitro systems in order to be able to develop concentration in the organisms or at the specific biomarkers and biosensors that can be applied as early warning systems. -
Quantitative Structure-Activity Relationships (QSAR) and Pesticides
Quantitative Structure-Activity Relationships (QSAR) and Pesticides Ole Christian Hansen Teknologisk Institut Pesticides Research No. 94 2004 Bekæmpelsesmiddelforskning fra Miljøstyrelsen The Danish Environmental Protection Agency will, when opportunity offers, publish reports and contributions relating to environmental research and development projects financed via the Danish EPA. Please note that publication does not signify that the contents of the reports necessarily reflect the views of the Danish EPA. The reports are, however, published because the Danish EPA finds that the studies represent a valuable contribution to the debate on environmental policy in Denmark. Contents FOREWORD 5 PREFACE 7 SUMMARY 9 DANSK SAMMENDRAG 11 1 INTRODUCTION 13 2QSAR 15 2.1 QSAR METHOD 15 2.2 QSAR MODELLING 17 3 PESTICIDES 21 3.1 MODES OF ACTION 21 3.2 QSAR AND PESTICIDES 22 3.2.1 SMILES notation 23 3.3 PHYSICO-CHEMICAL PROPERTIES 24 3.3.1 Boiling point 24 3.3.2 Melting point 25 3.3.3 Solubility in water 27 3.3.4 Vapour pressure 30 3.3.5 Henry’s Law constant 32 3.3.6 Octanol/water partition coefficient (Kow) 34 3.3.7 Sorption 39 3.4 BIOACCUMULATION 47 3.4.1 Bioaccumulation factor for aquatic organisms 47 3.4.2 Bioaccumulation factor for terrestrial organisms 49 3.5 AQUATIC TOXICITY 50 3.5.1 QSAR models on aquatic ecotoxicity 50 3.5.2 Correlations between experimental and estimated ecotoxicity 53 3.5.3 QSARs developed for specific pesticides 57 3.5.4 QSARs derived from pesticides in the report 60 3.5.5 Discussion on estimated ecotoxicity 86 4 SUMMARY OF CONCLUSIONS 89 REFERENCES 93 APPENDIX A 99 3 4 Foreword The concept of similar structures having similar properties is not new. -
Predicting Modes of Toxic Action from Chemical Structure: Acute Toxicity in the Fathead Minnow (Pimephales Promelas) Steven P
Iowa State University From the SelectedWorks of Steven P. Bradbury May, 1997 Predicting Modes of Toxic Action from Chemical Structure: Acute Toxicity in the Fathead Minnow (Pimephales Promelas) Steven P. Bradbury Christine L. Russom Steven J. Broderius Dean E. Hammermeister Robert A. Drummond Available at: https://works.bepress.com/steven_bradbury/25/ Environmental Toxicology and Chemistry, Vol. 16, No. 5, pp. 948±967, 1997 Printed in the USA 0730-7268/97 $6.00 1 .00 PREDICTING MODES OF TOXIC ACTION FROM CHEMICAL STRUCTURE: ACUTE TOXICITY IN THE FATHEAD MINNOW (PIMEPHALES PROMELAS) CHRISTINE L. RUSSOM,* STEVEN P. B RADBURY,STEVEN J. BRODERIUS, DEAN E. HAMMERMEISTER and ROBERT A. DRUMMOND U.S. Environmental Protection Agency, National Health and Environmental Effects Research Laboratory, Mid-Continent Ecology Division, 6201 Congdon Boulevard, Duluth, Minnesota 55804 (Received 7 May 1996; Accepted 23 September 1996) AbstractÐIn the ®eld of aquatic toxicology, quantitative structure±activity relationships (QSARs) have developed as scienti®cally credible models for predicting the toxicity of chemicals when little or no empirical data are available. In recent years, there has been an evolution of QSAR development and application from that of a chemical-class perspective to one that is more consistent with assumptions regarding modes of toxic action. The objective of this research was to develop procedures that relate modes of acute toxic action in the fathead minnow (Pimephales promelas) to chemical structures and properties. An empirically derived database for diverse chemical structures of acute toxicity and corresponding modes of toxic action was developed through joint toxic action studies, the establishment of toxicodynamic pro®les, and behavioral and dose±response interpretation of 96-h LC50 tests. -
NAFTA Technical Working Group on Pesticides Quantitative Structure Activity Relationship Guidance Document
TECHNICAL WORKING GROUP ON PESTICIDES (TWG) (Q)UANTITATIVE STRUCTURE ACTIVITY RELATIONSHIP NAFTA [(Q)SAR] GUIDANCE DOCUMENT Page 1 of 186 North American Free Trade Agreement (NAFTA) Technical Working Group on Pesticides (TWG) (Quantitative) Structure Activity Relationship [(Q)SAR] Guidance Document November, 2012 Contributors Mary Manibusan, US EPA Joel Paterson, PMRA Dr. Ray Kent, US EPA Dr. Jonathan Chen, US EPA Dr. Jenny Tao, US EPA Dr. Edward Scollon, US EPA Christine Olinger, US EPA Dr. Patricia Schmieder, US EPA Dr. Chris Russom, US EPA Dr. Kelly Mayo, US EPA Dr. Yin-tak Woo, US EPA Dr. Thomas Steeger, US EPA Dr. Edwin Matthews, US FDA Dr. Sunil Kulkarni, Health Canada External Peer Reviewers Kirk Arvidson, US FDA Mark Bonnell, Environment Canada Bob Diderich, OECD Terry Schultz, OECD Andrew Worth, European Commission – Joint Research Centre Page 2 of 186 PREFACE Integrated Approaches to Testing and Assessment (IATA) and (Q)SAR Pesticide regulatory agencies have traditionally relied on extensive in vivo and in vitro testing to support regulatory decisions on human health and environmental risks. While this approach has provided strong support for risk management decisions, there is a clear recognition that it can often require a large number of laboratory animal studies which can consume significant amounts of resources in terms of time for testing and evaluation. Even with the significant amounts of information from standard in vivo and in vitro testing, pesticide regulators are often faced with questions and issues relating to modes of action for toxicity, novel toxicities, susceptible populations, and other factors that can be challenging to address using traditional approaches. -
Investigation of Critical Body Residues and Modes of Toxic Action Based on Injection and Aquatic Exposure in Fish
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by LJMU Research Online Investigation of Critical Body Residues and Modes of Toxic Action Based on Injection and Aquatic Exposure in Fish Yang Wen & Limin Su & Weichao Qin & Yuanhui Zhao & Judith C. Madden & Fabian P. Steinmetz & Mark T. D. Cronin Abstract The internal concentration represented by the reactive compounds, but greater than the average CBR critical body residue (CBR) is an ideal indicator to for baseline compounds. This difference is due to the reflect the intrinsic toxicity of a chemical. Whilst some lipid fraction being the major storage site for most of the studies have been performed on CBR, the effect of baseline compounds. Investigation on the calculated exposure route on internal toxicity has not been investi- and observed CBRs shows that calculated CBRs are gated for fish. In this paper, acute toxicity data to fish close to observed CBRs for most of compounds. comprising LC50 and LD50 values were used to investi- However, systemic deviations of calculated CBRs gate CBR. The results showed that exposure route can have been observed for some compounds. The reasons significantly affect the internal concentration. LD50 and for these systemic deviations may be attributed to BCF, CBR calculated from LC50 and BCF both vary indepen- equilibrium time and experimental error of LC50. These dently of hydrophobicity as expressed by log Kow; factors are important and should be considered in the conversely, LC50 is related to log Kow. A poor relation- calculation of CBRs. ship was observed between LC and LD , but the 50 50 relationship can be improved significantly by introduc- Keywords Critical body residue . -
Predicting Modes of Toxic Action from Chemical Structure: Acute Toxicity in the Fathead Minnow (Pimephales Promelas)
Environmental Toxicology and Chemistry, Vol. 16, No. 5, pp. 948±967, 1997 Printed in the USA 0730-7268/97 $6.00 1 .00 PREDICTING MODES OF TOXIC ACTION FROM CHEMICAL STRUCTURE: ACUTE TOXICITY IN THE FATHEAD MINNOW (PIMEPHALES PROMELAS) CHRISTINE L. RUSSOM,* STEVEN P. B RADBURY,STEVEN J. BRODERIUS, DEAN E. HAMMERMEISTER and ROBERT A. DRUMMOND U.S. Environmental Protection Agency, National Health and Environmental Effects Research Laboratory, Mid-Continent Ecology Division, 6201 Congdon Boulevard, Duluth, Minnesota 55804 (Received 7 May 1996; Accepted 23 September 1996) AbstractÐIn the ®eld of aquatic toxicology, quantitative structure±activity relationships (QSARs) have developed as scienti®cally credible models for predicting the toxicity of chemicals when little or no empirical data are available. In recent years, there has been an evolution of QSAR development and application from that of a chemical-class perspective to one that is more consistent with assumptions regarding modes of toxic action. The objective of this research was to develop procedures that relate modes of acute toxic action in the fathead minnow (Pimephales promelas) to chemical structures and properties. An empirically derived database for diverse chemical structures of acute toxicity and corresponding modes of toxic action was developed through joint toxic action studies, the establishment of toxicodynamic pro®les, and behavioral and dose±response interpretation of 96-h LC50 tests. Using the results from these efforts, as well as principles in the toxicological literature, approximately 600 chemicals were classi®ed as narcotics (three distinct groups), oxidative phosphorylation uncouplers, respiratory inhibitors, electrophiles/proelec- trophiles, acetylcholinesterase inhibitors, or central nervous system seizure agents. -
Categorization of Chemicals Under the Toxic Substances Control Act
Categorization of Chemicals Under the Toxic Substances Control Act Louis Slesin* Ross Sandier** INTRODUCTION In 1976, after five years of debate, Congress enacted the Toxic Sub- stances Control Act (TSCA).' TSCA expands existing federal authority to regulate the chemical industry by granting to the Environmental Protection Agency (EPA) the authority to compel testing of chemicals and to regulate their production, use, and disposal. The House Report in support of the bill states that "the overriding purpose of the bill is to provide protection of health and the environment through authorities which are designed to pre- vent harm." 2 The House Report also states that Congress' concern was generated by the "vast volume" of chemicals, which have become a "pervasive and enduring part of our environment," and "have, for the most part, been released into the environment with little or no knowledge of their 3 long-term health or environmental effects." Simply put, the purpose of the Act is to prevent harm. This broad goal will not be met, however, if in administering the Act EPA does not-develop a regulatory scheme that is responsive to the immense task of regulating thousands of chemicals. Preventing harm before it emerges requires a regulatory system that is based on prediction of risk. Unfortunately, past attempts to regulate significant economic activity on the basis of predicted risks or costs to the environment or to health have failed, as evidenced by Copyright © 1978 by Ecology Law Quarterly. * Research Associate, Natural Resources Defense Council; Doctoral Candidate, Dep't of Urban Studies and Planning, M.I.T.; B.A. -
ADDENDUM for 2,3-Benzofuran
ADDENDUM TO THE TOXICOLOGICAL PROFILE FOR 2,3-BENZOFURAN Agency for Toxic Substances and Disease Registry Division of Toxicology and Human Health Sciences Atlanta, Georgia 30333 December 2012 ii 2,3-BENZOFURAN CONTENTS Background Statement ................................................................................................................... iii 2. HEALTH EFFECTS................................................................................................................... 1 2.2 DISCUSSION OF HEALTH EFFECTS BY ROUTE OF EXPOSURE ......................... 1 2.3 TOXICOKINETICS......................................................................................................... 2 2.3.3 Metabolism ............................................................................................................... 2 2.3.5 Mechanisms of Action .............................................................................................. 2 3. CHEMICAL AND PHYSICAL INFORMATION ................................................................ 3 3.1 CHEMICAL IDENTITY ................................................................................................. 3 3.2 CHEMICAL AND PHYSICAL PROPERTIES .............................................................. 3 4. PRODUCTION, IMPORT/EXPORT, USE, AND DISPOSAL ............................................. 3 5. POTENTIAL FOR HUMAN EXPOSURE............................................................................ 3 5.2 RELEASES TO THE ENVIRONMENT ........................................................................