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Ralf Reski, Prof. Dr
Ralf Reski, Prof. Dr. *18.11.1958, male, German Institution: Plant Biotechnology, Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104 Freiburg Contact: Phone: +49-761-203-6969, Email: [email protected] Position: Full Professor (C4, Ordinarius) in Plant Biotechnology Academic education including academic degrees 1984 1. Staatsexamen Biology, Chemistry, Pedagogics, Univ. of Hamburg (with distinction) Scientific graduation 1994 Habilitation, General Botany, University of Hamburg 1990 Dr. rer. nat. Genetics, University of Hamburg Employment 2014 – 2018 Elected Senator (most votes), Speaker of Professors in the Academic Senate 2010 – 2014 Elected Senator (most votes), Speaker of Professors in the Academic Senate 2006 – 2008 Dean of the Faculty of Biology, University of Freiburg Since 2004 Professor at the Ecole Supérieure de Biotechnologie Strasbourg ESBS Since 1999 Full Professor (C4, Ordinarius), University of Freiburg 1996 – 1998 Heisenberg-Fellow of the DFG 1990 – 1996 Assistant Professor (C1), University of Hamburg Other activities, awards and honors 2018 Haberlandt-Lecture, FU Berlin 2016 – 2020 Advisor, CeBiTec - Center for Biotechnology, University of Bielefeld 2015 – 2018 Co-ordinator, EU ERASMUS PLUS TREASURE-WATER 2013 Appointment as Senior Fellow, University of Strasbourg Institute for Advanced Study (USIAS) 2012 President of the FESPB/EPSO Plant Biology Congress Since 2011 Advisor, Greenovation Biotech GmbH 2011 Heidelberg Academy of Sciences and Humanities, Lifetime Member 2011 Appointment as Senior -
Phd Thesis “Plant Cell Biology / Biomimetics” in the DFG-Funded
PhD Thesis “Plant Cell Biology / Biomimetics” in the DFG-funded SFB / TRR 141 (Stuttgart, Tübingen, Freiburg): "Biological Design and Integrative Structures" Project A09: Analysis of Physcomitrella chloroplasts to reveal adaptation principles leading to structural stability at the nano-scale Proteins of the FtsZ (filamentous temperature-sensitive Z) family establish complex polymeric spatial patterns in plastids of the moss Physcomitrella patens. These structures represent a "plastoskeleton" that might contribute to plastid shape and stability. The aim of this project is to develop mathematical models of FtsZ network connectivity and dynamics in order to investigate whether molecular structures of the plastoskeleton are evolutionary optimized to withstanding mechanical stress. The successful candidate will work in the group of Prof. Ralf Reski, Department of Plant Biotechnology, Faculty of Biology, University of Freiburg, Germany. Please visit www.plant- biotech.net for details. A major part of the work is the establishment and analysis of transgenic moss lines. Applicants should have a strong background in plant molecular biology as well as (confocal) microscopy. An interest in bioinformatics is required, because the project depends on a close collaboration and constant exchange between the results of computational modelling and the ensuing requirements and possibilities for biomimetics and reverse biomimetics experiments in the biological system. The research will be conducted in close collaboration with a second PhD student specialised in engineering, based in Stuttgart (Prof. Röhrle). We offer a highly interdisciplinary, inspiring and open-minded environment within the newly funded Transregio TRR 141 including a strong course- and seminar-program for graduate students. Applicants should have an excellent master or diploma in biology or a related discipline. -
Cytological Analysis and Structural Quantification of Ftsz1-2 and Ftsz2
www.nature.com/scientificreports OPEN Cytological analysis and structural quantifcation of FtsZ1-2 and FtsZ2-1 network characteristics in Received: 5 March 2018 Accepted: 5 July 2018 Physcomitrella patens Published: xx xx xxxx Bugra Özdemir1, Pouyan Asgharzadeh2,4, Annette I. Birkhold 2, Stefanie J. Mueller 3, Oliver Röhrle2,4 & Ralf Reski 1,5,6 Although the concept of the cytoskeleton as a cell-shape-determining scafold is well established, it remains enigmatic how eukaryotic organelles adopt and maintain a specifc morphology. The Filamentous Temperature Sensitive Z (FtsZ) protein family, an ancient tubulin, generates complex polymer networks, with striking similarity to the cytoskeleton, in the chloroplasts of the moss Physcomitrella patens. Certain members of this protein family are essential for structural integrity and shaping of chloroplasts, while others are not, illustrating the functional diversity within the FtsZ protein family. Here, we apply a combination of confocal laser scanning microscopy and a self-developed semi- automatic computational image analysis method for the quantitative characterisation and comparison of network morphologies and connectivity features for two selected, functionally dissimilar FtsZ isoforms, FtsZ1-2 and FtsZ2-1. We show that FtsZ1-2 and FtsZ2-1 networks are signifcantly diferent for 8 out of 25 structural descriptors. Therefore, our results demonstrate that diferent FtsZ isoforms are capable of generating polymer networks with distinctive morphological and connectivity features which might be linked to the functional diferences between the two isoforms. To our knowledge, this is the frst study to employ computational algorithms in the quantitative comparison of diferent classes of protein networks in living cells. Eukaryotic cells are highly compartmentalized with entities that are each enclosed within a lipid bilayer. -
BIOLOGY INTERNATIONAL the Official Journal of the International Union of Biological Sciences
BIOLOGY INTERNATIONAL The Official Journal of the International Union of Biological Sciences Editor: John R. Jungck, Department of Biology, Beloit College, 700 College Street, Beloit , WI 53511, USA, e-mail: [email protected] Associate Editor: Lorna Holtman, Deputy Dean, Zoology Department, University of the Western Cape (UWC), Private Bag X17, Bellville 7535, Republic of South Africa, e-mail: [email protected] Managing Editor: Sue Risseeuw, Department of Biology, Beloit College, 700 College Street, Beloit , WI 53511, USA, e-mail: [email protected] Editorial Board Giorgio Bernardi, Accademia Nazionale delle Scienze, via Peter G. Kevan, Department of Environmental Biology L. Spallanzani 5/a, 00161 Rome, Italy University of Guelph, Guelph, ON N3C 2B7, Canada e-mail: [email protected] e-mail: [email protected] John Buckeridge, RMIT University School of Civil, Nicholas Mascie Taylor, Department of Biological Environmental and Chemical Engineering, Building 10, Anthropology, University of Cambridge level 12, 376-392 Swanston Street Melbourne e-mail: [email protected] GPO Box 2476V, Melbourne VIC 3001 Australia e-mail: [email protected] Ralf Reski, Head, Plant Biotechnology, Faculty of Biology, University of Freiburg, Schaenzlestrasse 1 Zhibin Zhang, Director, Institute of Zoology, Chinese D-79104 Freiburg Germany Acadmey of Sciences, Beijing 100080, P.R. China e-mail: [email protected] e-mail: [email protected] Lily Rodriguez, Sede Servicio Nacional de Areas Jean-Marc Jallon, Institut de Biologie Animale Naturales Protegidas, Ministerio del Ambiente, Lima 27, Intégrative et Cellulaire (IBAIC), Bât. 446, UPS-Orsay, Peru 91405 Orsay e-mail: [email protected] France e-mail: [email protected] Hussein Samir Salama, National Research Centre, Plant Protection Department, Tahrir Street, Dokki, Annelies Pierrot-Bults, Institute for Biodiversity and 12311 Cairo, Egypt Ecosystems Dynamics, Zoological Museum, University of e-mail: [email protected] Amsterdam, P.O. -
List of Participants
List of Participants: Prof. Ralf Reski, Project Co-ordinator - ALU Albert-Ludwig University of Freiburg (Germany) Dr Edgar Wagner, Project Acting Co-ordinator - ALU Albert-Ludwig University of Freiburg (Germany) Anne Katrin Prowse, Project Administrator - ALU Albert-Ludwig University of Freiburg (Germany) Athena Economou-Amilli, Professor Emeritus, Faculty of Biology, Dept of Ecology & Systematics, University of Athens (Greece) Dr. Yannis Mylopoulos, Aristotle University of Thessaloniki (Greece) Dr. Elpida Kolokytha, Assoc. Professor, Aristotle University of Thessaloniki (Greece) Dr Johannes Antonius Wintermans, Radboud University, Nijmegen (The Netherlands) Prof. Valery A. Zemtsov, Head of the Hydrology Dept, Tomsk State University (Russia) Dr. Dmitry A. Vershinin, Assoc. Professor, Hydrology Department, Tomsk State University (Russia) Prof. Gennady Ya. Baryshnikov, Dean of the Faculty, Faculty of Geography, Altai State University (Russia) Olga V. Denisenko, Assistant Professor, Natural Science Department, Chair of Foreign Languages, Altai State University (Russia) Dr. Bella A. Krasnoyarova, Acting Head of the Laboratory of Landscape, Water and Ecology Research, Institute for Water and Ecological Problems (Russia) Prof. Anar B. Myrzagalieva, Vice Rector for Academic Affairs, East-Kazakhstan State University named after S. Amanzholov, Ust-Kamenogorsk (Kazakhstan) Balzhan Z. Medeubayeva, Acting head of post-graduate education department, East- Kazakhstan State University named after S. Amanzholov, Ust-Kamenogorsk (Kazakhstan) Dr. Raihan R. Beisenova, Head of the Chair of Management and Engineering, Eurasian National University named after L.N. Gumilev, Astana (Kazakhstan) Dr. Gulnara A. Biakhmetova, Deputy Director of the Economy Department, Eurasian National University named after L.N. Gumilev, Astana (Kazakhstan) Tatiana A. Ponomarenko, Head of Learning Centre, LLC «Tyumen Vodokanal», Tyumen (Russia) Dr. Andrei V. -
WO 2018/079685 Al 03 May 2018 (03.05.2018) W !P O PCT
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2018/079685 Al 03 May 2018 (03.05.2018) W !P O PCT (51) International Patent Classification: Published: C12P 7/42 (2006 .0 1) C12P 13/12 (2006 .0 1) — with international search report (Art. 21(3)) (21) International Application Number: — with sequence listing part of description (Rule 5.2(a)) PCT/JP20 17/038797 (22) International Filing Date: 26 October 2017 (26.10.2017) (25) Filing Language: English (26) Publication Langi English (30) Priority Data: 62/413,052 26 October 2016 (26.10.2016) US (71) Applicant: AJINOMOTO CO., INC. [JP/JP]; 15-1, Ky- obashi 1-chome, Chuo-ku, Tokyo, 10483 15 (JP). (72) Inventors: MIJTS, Benjamin; 757 Elm St., Apt 1, San Carlos, California, 94070 (US). ROCHE, Christine; 1920 Francisco St., Apt 303, Berkeley, California, 94709 (US). ASARI, Sayaka; c/o AJINOMOTO CO., INC., 1-1, Suzu- ki-cho, Kawasaki-ku, Kawasaki-shi, Kanagawa, 2108681 (JP). TOYAZAKI, Miku; c/o AJINOMOTO CO., INC., 1-1, Suzuki-cho, Kawasaki-ku, Kawasaki-shi, Kanagawa, 2108681 (JP). FUKUI, Keita; c/o AJINOMOTO CO., INC., 1-1, Suzuki-cho, Kawasaki-ku, Kawasaki-shi, Kana gawa, 2108681 (JP). (74) Agent: KAWAGUCHI, Yoshiyuki et al; Acropolis 2 1 Building 8th floor, 4-10, Higashi Nihonbashi 3-chome, Chuo-ku, Tokyo, 1030004 (JP). (81) Designated States (unless otherwise indicated, for every kind of national protection available): AE, AG, AL, AM, AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DJ, DK, DM, DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, HN, HR, HU, ID, IL, IN, IR, IS, JO, JP, KE, KG, KH, KN, KP, KR, KW, KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW. -
Dynamic Metabolic Solutions to the Sessile Life Style of Plants Natural Product Reports
Volume 35 Number 11 November 2018 Pages 1113–1230 Natural Product Reports rsc.li/npr Themed issue: Understanding Biosynthetic Protein-Protein Interactions – Part 2 Guest Editors: David Ackerley, Gregory Challis and Max Cryle ISSN 0265-0568 REVIEW ARTICLE Tomas Laursen et al. Dynamic metabolic solutions to the sessile life style of plants Natural Product Reports REVIEW View Article Online View Journal | View Issue Dynamic metabolic solutions to the sessile life style of plants Cite this: Nat. Prod. Rep.,2018,35, 1140 Camilla Knudsen, abc Nethaji Janeshawari Gallage, abc Cecilie Cetti Hansen, abc Birger Lindberg Møller abcd and Tomas Laursen *abc Covering: up to 2018 Plants are sessile organisms. To compensate for not being able to escape when challenged by unfavorable growth conditions, pests or herbivores, plants have perfected their metabolic plasticity by having developed the capacity for on demand synthesis of a plethora of phytochemicals to specifically respond to the challenges arising during plant ontogeny. Key steps in the biosynthesis of phytochemicals are catalyzed by membrane-bound cytochrome P450 enzymes which in plants constitute a superfamily. In planta, the P450s may be organized in dynamic fi Creative Commons Attribution-NonCommercial 3.0 Unported Licence. enzyme clusters (metabolons) and the genes encoding the P450s and other enzymes in a speci cpathway may be clustered. Metabolon formation facilitates transfer of substrates between sequential enzymes and therefore enables the plant to channel the flux of general metabolites towards biosynthesis of specific phytochemicals. In the plant cell, compartmentalization of the operation of specific biosynthetic pathways in specialized plastids serves to avoid undesired metabolic cross-talk and offersdistinctstoragesitesformolar concentrations of specific phytochemicals. -
Programg Day 1 July 21
PProgramg Day 1 July 21 19:30 Welcome Reception (at Mizu no Uta ) Dayy 2 Julyy 22 8:408:40-10:00 10:00 Oral Session: Chairperson/Daisukep Takezawa RAD51 loss of function abolishes gene targeting and de-repressesde represses illegitimate T1 integrationgyp in the Physcomitrella patens Didier G. Schaefer, Fabien Delacote, Florence Charlot, Nathalie Vrielynck, MarieMarie-Pascale Pascale Doutriaux and Fabien Nogué RRapidpp id repair i of f DNA ddouble bl strand t d bbreaks k (DSB(DSBs)( ) is i a common ffeature t T2 of higher and lower plantsplants, as well as mammalian cells Jaroslav Kozak, Marketa Smidkova and Karel J. Angelis Stress-induced miR1026 dependent regulation of a bHLH transcription factor T3 mRNARNA iin PhPhyscomitrellayp it ll patens t Marta Anna Tomek, Basel KhraiweshKhraiwesh, Daniel LangLang, Stefan JansenJansen, Jens TimmerTimmer, Ralf ReskiReski, and WlfWolfganggg FFrank k Effect of externally added trehalose on the growth and sugar partitioning in T4 Physcomitrella patens Nelson Avonce and Patrick Van Dijck 10:00-10:20 Coffee Break 10:20-12:00 Oral Session: Chairperson/Stefan Rensing T5 PP2CPP2C-mediated di t d abscisic b i i acid id signaling igg li iin liverworts li t Salma Begum BhyanBhyan, Kenji KomatsuKomatsu, Midori KanekoKaneko, Akter KhaledaKhaleda, Yoichi SakataSakata, Kimitsune IhikiKIshizaki,,y Katsuyuki kiTY T. Yamato, ,y, TkTakayuki, kiKhhi Kohchi and d DiDaisuke k TkTakezawa T6 Submergence response requires ethylene signalling in Physcomitrella patens Yuki Yasumura,,,CJ()V, Ronald Pierik, L.A.C.J. (Rens) Voesenek, and Nicholas P Harberd Cloning and Functional Analysis of the Key Enzymes Involved in Jasmonic Acid T7 BiBiosynthesisy th i in i PhPhyscomitrellayp it ll patens. -
Natural Vanillin Production from Accessible Carbon Sources
www.nature.com/scientificreports OPEN Mimicking a natural pathway for de novo biosynthesis: natural vanillin production from accessible Received: 11 March 2015 Accepted: 03 August 2015 carbon sources Published: 02 September 2015 Jun Ni, Fei Tao, Huaiqing Du & Ping Xu Plant secondary metabolites have been attracting people’s attention for centuries, due to their potentials; however, their production is still difficult and costly. The rich diversity of microbes and microbial genome sequence data provide unprecedented gene resources that enable to develop efficient artificial pathways in microorganisms. Here, by mimicking a natural pathway of plants using microbial genes, a new metabolic route was developed in E. coli for the synthesis of vanillin, the most widely used flavoring agent. A series of factors were systematically investigated for raising production, including efficiency and suitability of genes, gene dosage, and culture media. The metabolically engineered strain produced 97.2 mg/L vanillin from l-tyrosine, 19.3 mg/L from glucose, 13.3 mg/L from xylose and 24.7 mg/L from glycerol. These results show that the metabolic route enables production of natural vanillin from low-cost substrates, suggesting that it is a good strategy to mimick natural pathways for artificial pathway design. Vanillin (4-hydroxy-3-methoxybenzaldehyde) is one of the most widely used flavoring agents in the world. With an intensely and tenacious creamy vanilla-like odor, it is often used in foods, perfumes, beverages, and pharmaceuticals1. As a plant secondary metabolite, natural vanillin is extracted from the seedpods of orchids (Vanilla planifolia, Vanilla tahitensis, and Vanilla pompona). The annual worldwide consumption of vanillin exceeds 16,000 tons; however, owing to the slow growth of orchids and the low concentrations of vanillin in these plants (about 2% of the dry weight of cured vanilla beans), only about 0.25% of consumed vanillin originates from vanilla pods2. -
Phenylpropanoid 2,3-Dioxygenase Involved in the Cleavage of the Ferulic Acid Side Chain to Form Vanillin and Glyoxylic Acid in Vanilla Planifolia
Phenylpropanoid 2,3-dioxygenase involved in the cleavage of the ferulic acid side chain to form vanillin and glyoxylic acid in Vanilla planifolia 1, 2 Osamu Negishi * and Yukiko Negishi 1 Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan 2 Institute of Nutrition Sciences, Kagawa Nutrition University, Sakado, Saitama 350-0288, Japan [The research was conducted at University of Tsukuba.] *Corresponding author. Phone: +81-29-853-4933. E-mail: [email protected]. Abbreviations: DTT, dithiothreitol; GSH, glutathione; GA, glyoxylic acid; qNMR, quantitative NMR; UDP-glucose, uridine 5’-diphosphoglucose. 1 Abstract Enzyme catalyzing the cleavage of the phenylpropanoid side chain was partially purified by ion exchange and gel filtration column chromatography after (NH4)2SO4 precipitation. Enzyme activities were dependent on the concentration of dithiothreitol (DTT) or glutathione (GSH) and activated by addition of 0.5 mM Fe2+. Enzyme activity for ferulic acid was as high as for 4-coumaric acid in the presence of GSH, suggesting that GSH acts as an endogenous reductant in vanillin biosynthesis. Analyses of the enzymatic reaction products with quantitative NMR (qNMR) indicated that an amount of glyoxylic acid (GA) proportional to vanillin was released from ferulic acid by the enzymatic reaction. These results suggest that phenylpropanoid 2,3-dioxygenase is involved in the cleavage of the ferulic acid side chain to form vanillin and GA in Vanilla planifolia (Scheme 1). H H COOH O COOH H HO HO + O Phenylpropanoid H OCH3 2,3-dioxygenase OCH3 Ferulic acid Vanillin Glyoxylic acid Scheme 1. Phenylpropanoid 2,3-dioxygenase is involved in the cleavage of the ferulic acid side chain to form vanillin and GA in Vanilla planifolia Key words: Vanilla planifolia; biosynthesis of vanillin; glyoxylic acid; ferulic acid; phenylpropanoid 2,3-dioxygenase 2 Introduction Vanillin is accumulated as a glucoside in the green vanilla pods (Vanilla planifolia) and the sweet aroma is released only by the “curing” treatment. -
Skeletons in the Closet: How Do Chloroplasts Stay in Shape? Geoffrey I
Comment Skeletons in the Closet: How Do Chloroplasts Stay in Shape? Geoffrey I. McFadden Plant Cell Biology Research Centre, School of Botany, University of Melbourne, Parkville 3010, Australia Breakthroughs in microscopy technology provide new in- ing of chloroplast ftsZ in higher plants (knockouts are not sights into cell biology. Early microscopes allowed Robert feasible in higher plants) also perturbs chloroplast division Hooke to see cells. Improved staining techniques enabled (Osteryoung et al., 1998). Proteins known to interact with Camillo Golgi to see the apparatus that bears his name, FtsZ in bacteria also have been demonstrated to have and Robert Feulgen to visualize DNA in chromosomes. roles in chloroplast division, thereby suggesting that plas- Similarly, EM allowed Keith Porter to visualize the en- tid division retains major hallmarks of its bacterial ances- domembrane system. More recently, transgenic technol- try, albeit with modifications imposed by existing within a ogy using fluorescent reporter proteins has enabled us to host cell (Colletti et al., 2000). Previously, no one had visu- visualize cryptic or ephemeral processes and structures in alized FtsZ in chloroplasts, so how do the FtsZ/GFP fusion living cells. The latest revelation with this technology is in structures observed by Kiessling et al. (2000) fit our no- chloroplast biology. On page 945 of this issue, Kiessling et tions of FtsZ structures in bacteria? al. show that fusion of green fluorescent protein (GFP)1 Immunolocalization and FtsZ/GFP fusion analyses re- with the FtsZ (filament temperature sensitive Z) protein veal a ring (the so-called Z ring) at the site of constriction targeted to chloroplasts of the moss Physcomitrella reveals in dividing bacteria (Margolin, 1998). -
Short Genome Reports
1 Short Genome Reports 2Improved, high-quality permanent draft genome of Burkholderia 3cenocepacia TAtl-371, a strain from the Burkholderia cepacia 4complex with a broad antagonistic spectrum 5Authors 6Fernando Uriel Rojas-Rojas1, David López-Sánchez1, Erika Yanet Tapia García1, 7Maskit Maymon2, Ethan Humm2, Marcel Huntemann3, Alicia Clum3, Manoj Pillay3, 8Krishnaveni Palaniappan3, Neha Varghese3, Natalia Mikhailova3, Dimitrios Stamatis3, 9T.B.K. Reddy3, Victor Markowitz3, Natalia Ivanova3, Nikos Kyrpides3, Tanja Woyke3, 10Nicole Shapiro3, Ann M. Hirsch2,4, J. Antonio Ibarra1 and Paulina Estrada-de los 11Santos1 12Institutional Affiliation 131 Instituto Politécnico Nacional, Escuela Nacional de Ciencias Biológicas, Prol. Carpio 14y Plan de Ayala s/n. Col. Santo Tomás, Del. Miguel Hidalgo. C.P. 11340. México, Cd. 15de México. 162 Dept. of Molecular, Cell and Developmental Biology and 4Molecular Biology 17Institute, University of California-Los Angeles, Los Angeles, California, United States 18of America 90095. 193 DOE Joint Genome Institute 2800 Mitchell Drive Walnut Creek CA 94598. 20Corresponding author [email protected], Instituto Politécnico Nacional, Escuela Nacional 22de Ciencias Biológicas. Prol. Carpio y Plan de Ayala s/n. Col. Santo Tomás, Del. 23Miguel Hidalgo. C.P. 11340. México, Cd. de México. 24Abstract 25Burkholderia cenocepacia TAtl-371 was isolated from the rhizosphere of a tomato 26plant growing in Atlatlahuacan, Morelos, Mexico. This strain exhibited a broad 27antimicrobial spectrum against bacteria, yeast, and fungi. Here we report and 28describe the improved, high-quality permanent draft genome of B. cenocepacia 29TAtl-371, which was sequenced using a combination of PacBio RS and PacBio RS II 30sequencing methods. The 7,496,106 bp genome of the TAtl-371 strain is arranged 31in 3 scaffolds, contains 6722 protein coding genes, and 99 RNA only-encoding 32genes.