THREE Common SPECIES of Auricularia 13
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Genome Sequence Analysis of Auricularia Heimuer Combined with Genetic Linkage Map
Journal of Fungi Article Genome Sequence Analysis of Auricularia heimuer Combined with Genetic Linkage Map Ming Fang 1, Xiaoe Wang 2, Ying Chen 2, Peng Wang 2, Lixin Lu 2, Jia Lu 2, Fangjie Yao 1,2,* and Youmin Zhang 1,* 1 Lab of genetic breeding of edible mushromm, Horticultural, College of Horticulture, Jilin Agricultural University, Changchun 130118, China; [email protected] 2 Engineering Research Centre of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun 130118, China; [email protected] (X.W.); [email protected] (Y.C.); [email protected] (P.W.); [email protected] (L.L.); [email protected] (J.L.) * Correspondence: [email protected] (F.Y.); [email protected] (Y.Z.) Received: 3 March 2020; Accepted: 12 March 2020; Published: 16 March 2020 Abstract: Auricularia heimuer is one of the most popular edible fungi in China. In this study, the whole genome of A. heimuer was sequenced on the Illumina HiSeq X system and compared with other mushrooms genomes. As a wood-rotting fungus, a total of 509 carbohydrate-active enzymes (CAZymes) were annotated in order to explore its potential capabilities on wood degradation. The glycoside hydrolases (GH) family genes in the A. heimuer genome were more abundant than the genes in the other 11 mushrooms genomes. The A. heimuer genome contained 102 genes encoding class III, IV, and V ethanol dehydrogenases. Evolutionary analysis based on 562 orthologous single-copy genes from 15 mushrooms showed that Auricularia formed an early independent branch of Agaricomycetes. The mating-type locus of A. heimuer was located on linkage group 8 by genetic linkage analysis. -
Studies on Ear Fungus-Auricularia from the Woodland of Nameri National Park, Sonitpur District, Assam
International Journal of Interdisciplinary and Multidisciplinary Studies (IJIMS), 2014, Vol 1, No.5, 262-265. 262 Available online at http://www.ijims.com ISSN: 2348 – 0343 Studies on Ear Fungus-Auricularia from the Woodland of Nameri National Park, Sonitpur District, Assam. M.P. Choudhury1*, Dr.T.C Sarma2 1.Department of Botany, Nowgong College, Nagaon -782001, Assam, India. 2.Department of Botany, Gauhati University,Guwahati-7810 14, Assam, India. *Corresponding author: M.P. Choudhury Abstract Auricularia is the genus of the order Auriculariales with more than 10 species. It is also called ear fungus due to its morphological similarities with human ear and has considerable mythological importance. Auricularia auricula is the type species of the order Auriculariales. Different species of Auricularia are edible and some have medicinal importance and still investigations are going on other species to find out their medicinal properties. Extensive woodland of Nameri National Park provides ideal condition for the growth of different species of Auricularia. In this context the present study has been undertaken to study the taxonomy and diversity of different species of Auricularia and bring together information of its ethenomycological uses. As a result of field and laboratory study four different species of Auricularia were collected of which 3 species were identified and one species remain unidentified. Key Words: Auricularia, Taxonomy, Diversity, Nameri National Park. Introduction Auricularia belongs to the order Auriculariales is the largest genus of jelly fungi. They are among the most common and widely distributed members of macrofungi, which generally occurs as saprophytes on wood, logs, branch and twigs causing severe degrees of white rotting of forest trees. -
Annotated Check List and Host Index Arizona Wood
Annotated Check List and Host Index for Arizona Wood-Rotting Fungi Item Type text; Book Authors Gilbertson, R. L.; Martin, K. J.; Lindsey, J. P. Publisher College of Agriculture, University of Arizona (Tucson, AZ) Rights Copyright © Arizona Board of Regents. The University of Arizona. Download date 28/09/2021 02:18:59 Link to Item http://hdl.handle.net/10150/602154 Annotated Check List and Host Index for Arizona Wood - Rotting Fungi Technical Bulletin 209 Agricultural Experiment Station The University of Arizona Tucson AÏfJ\fOTA TED CHECK LI5T aid HOST INDEX ford ARIZONA WOOD- ROTTlNg FUNGI /. L. GILßERTSON K.T IyIARTiN Z J. P, LINDSEY3 PRDFE550I of PLANT PATHOLOgY 2GRADUATE ASSISTANT in I?ESEARCI-4 36FZADAATE A5 S /STANT'" TEACHING Z z l'9 FR5 1974- INTRODUCTION flora similar to that of the Gulf Coast and the southeastern United States is found. Here the major tree species include hardwoods such as Arizona is characterized by a wide variety of Arizona sycamore, Arizona black walnut, oaks, ecological zones from Sonoran Desert to alpine velvet ash, Fremont cottonwood, willows, and tundra. This environmental diversity has resulted mesquite. Some conifers, including Chihuahua pine, in a rich flora of woody plants in the state. De- Apache pine, pinyons, junipers, and Arizona cypress tailed accounts of the vegetation of Arizona have also occur in association with these hardwoods. appeared in a number of publications, including Arizona fungi typical of the southeastern flora those of Benson and Darrow (1954), Nichol (1952), include Fomitopsis ulmaria, Donkia pulcherrima, Kearney and Peebles (1969), Shreve and Wiggins Tyromyces palustris, Lopharia crassa, Inonotus (1964), Lowe (1972), and Hastings et al. -
The Diversity of Basidiomycota Fungi That Have the Potential As a Source of Nutraceutical to Be Developed in the Concept of Integrated Forest Management Poisons
International Journal of Recent Technology and Engineering (IJRTE) ISSN: 2277-3878, Volume-8 Issue-2S, July 2019 The Diversity of Basidiomycota Fungi that Have the Potential as a Source of Nutraceutical to be Developed in the Concept of Integrated Forest Management Mustika Dewi, I Nyoman Pugeg Aryantha, Mamat Kandar straw mushrooms, oyster mushrooms, and shiitake Abstract: The fungus Basidiomycota found in Indonesia have mushrooms. very high diversity, but have not been explored so far. The development of local Basidiomycota mushrooms that Development of fungi Basidiomycota is an alternative as a are cultivated by utilizing space on the forest floor has not source of natural nutraceuticals, especially beta glucan and been done mostly in Indonesia. In several countries such as lovastatin compounds. This compound can be used in the pharmaceutical and food fields. This study aims to obtain Japan, people have long been cultivating shitake mushrooms Basidiomycota fungi isolates that have the potential as a by utilizing forest floors. Reported by (Savoie & Largeteau, nutraceutical source. As the first stage in this research, the 2011) that mushrooms from the Basidiomycota group are activities carried out were exploration, isolation on culture widely produced in forest areas through the utilization of media, and identification of fungi based on genotypic forest floors as a place to grow these fungi which have characters. The results showed that the fungi identified based on economic value quite high by applying the concept of their genotypic characters were Pleurotusostreatus, Ganodermacf, Resinaceum, Lentinulaedodes, micosilviculture. The concept of micosilviculture is a Vanderbyliafraxinea, Auricularia delicate, Pleurotusgiganteus, concept that is applied in the management of integrated Auricularia sp. -
Auricularia Olivaceus: a New Species from North India
Mycosphere Doi 10.5943/mycosphere/4/1/7 Auricularia olivaceus: a new species from North India Kumari B1, Upadhyay RC2 and Atri NS3 1Abhilashi Institute of Life Sciences, Tanda, Nerchock, Mandi, Himachal Pradesh (India) 2 Directorate of Mushroom Research, Chambaghat, Solan (India) 3 Department of Botany, Punjabi University, Patiala, Punjab, India Kumari B, Upadhyay RC, Atri NS 2013 – Auricularia olivaceus: a new species from North India. Mycosphere 4(1), 133–138, Doi 10.5943/mycosphere/4/1/7 Auricularia olivaceus sp. nov. (family Auriculariaceae) is described and illustrated as a new species, based on collections from Himachal Pradesh, North India. Key words – Basidiomycetes – India – macrofungi – taxonomy. Article Information Received 18 December 2012 Accepted 8 January 2013 Published online 27 February 2013 *Corresponding author: Kumari B – e-mail – [email protected] Introduction branched, slender, usually strongly meta- The genus Auricularia is recognized as morphosed. Basidiospores are inamyloid, an edible mushroom, including 9 species hyaline, cyanophilous and allantoid. It is throughout the world: A. americana, A. commonly known as wood ear fungus or auricula-judae, A. cornea, A. fuscosuccinea, A. grouped under "jelly-fungi" based on the ear- delicata, A. pectata, A. mesenterica, A. like or gelatinous consistency of the fruiting polytricha and A. sordescens (Kirk et al. 2008). bodies. This genus is diverse and complicated within The species of this genus have been basidiomycetes having gelatinous, resupinate described on the basis of both classical or to substipitate, solitary to gregarious dark phylogenetic tools (Lowy 1952, Kobayasi yellow to brown or reddish to dark brown 1981, Bandoni 1984, Weiß & Oberwinkler basidiocarps with the lower surface smooth, 2001, Montoya-Alvarez et al. -
Fungi of the Baldwin Woods Forest Preserve - Rice Tract Based on Surveys Conducted in 2020 by Sherry Kay and Ben Sikes
Fungi of the Baldwin Woods Forest Preserve - Rice Tract Based on surveys conducted in 2020 by Sherry Kay and Ben Sikes Scientific name Common name Comments Agaricus silvicola Wood Mushroom Allodus podophylli Mayapple Rust Amanita flavoconia group Yellow Patches Amanita vaginata group 4 different taxa Arcyria cinerea Myxomycete (Slime mold) Arcyria sp. Myxomycete (Slime mold) Arcyria denudata Myxomycete (Slime mold) Armillaria mellea group Honey Mushroom Auricularia americana Cloud Ear Biscogniauxia atropunctata Bisporella citrina Yellow Fairy Cups Bjerkandera adusta Smoky Bracket Camarops petersii Dog's Nose Fungus Cantharellus "cibarius" Chanterelle Ceratiomyxa fruticulosa Honeycomb Coral Slime Mold Myxomycete (Slime mold) Cerioporus squamosus Dryad's Saddle Cheimonophyllum candidissimum Class Agaricomycetes Coprinellus radians Orange-mat Coprinus Coprinopsis variegata Scaly Ink Cap Cortinarius alboviolaceus Cortinarius coloratus Crepidotus herbarum Crepidotus mollis Peeling Oysterling Crucibulum laeve Common Bird's Nest Dacryopinax spathularia Fan-shaped Jelly-fungus Daedaleopsis confragosa Thin-walled Maze Polypore Diatrype stigma Common Tarcrust Ductifera pululahuana Jelly Fungus Exidia glandulosa Black Jelly Roll Fuligo septica Dog Vomit Myxomycete (Slime mold) Fuscoporia gilva Mustard Yellow Polypore Galiella rufa Peanut Butter Cup Gymnopus dryophilus Oak-loving Gymnopus Gymnopus spongiosus Gyromitra brunnea Carolina False Morel; Big Red Hapalopilus nidulans Tender Nesting Polypore Hydnochaete olivacea Brown-toothed Crust Hymenochaete -
Species Clarification of the Most Important and Cultivated Auricularia Mushroom “Heimuer”: Evidence from Morphological and Molecular Data
Phytotaxa 186 (5): 241–253 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2014 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.186.5.1 Species clarification of the most important and cultivated Auricularia mushroom “Heimuer”: evidence from morphological and molecular data FANG WU1, YUAN YUAN1, VERA F. MALYSHEVA2, PING DU3 & YU-CHENG DAI1* 1Institute of Microbiology & Beijing Key Laboratory for Forest Pest Control, PO Box 61, Beijing Forestry University, Beijing 100083, China 2Komarov Botanical Institute RAS Lab. of Systematics and Geography of Fungi, St Petersburg 197376, Russia 3Heilongjiang Agricultural Economy Vocational College, Mudanjiang 157041, China * Corresponding author’s e-mail: [email protected] Abstract Phylogenetic analysis of the Auricularia auricula-judae complex was carried out using ITS and nLSU ribosomal RNA gene regions, and morphology of the A. auricula-judae complex and related species is examined based on 33 wild collections and 10 cultivated samples worldwide. The phylogenetic analysis presented here showed that the wild and cultivated samples pre- viously identified as A. auricula-judae in China are different from those from Europe (the type locality). So far no exist name for the most important Chinese Auricularia species is available, and thus a new species, Auricularia heimuer, is described and illustrated. The new species is characterized by effused-reflexed or substipitate basidiomata with fawn to reddish brown color when fresh and vinaceous gray to dark gray when dry, pilose upper surface usually with a few folds when dry, short abhymenial hairs without branching and measured as 50–150 × 4–6.5 µm, usually presence of medulla, long clavate basidia with oil guttules and measured as 40–67 × 3.0–6.5 µm, and allantoid spores measured as 11–13 × 4–5 µm. -
Biomass Production in Auricularia Spp.(Jew S Ear) Collected from Manipur, India
Int.J.Curr.Microbiol.App.Sci (2015) 4(6): 985-989 ISSN: 2319-7706 Volume 4 Number 6 (2015) pp. 985-989 http://www.ijcmas.com Original Research Article Biomass Production in Auricularia spp.(Jew s ear) collected from Manipur, India M. Babita Devi1*, S. Mukta Singh2 and N. Irabanta Singh1 1Centre of Advanced Studies in Life Sciences, Manipur University, Chanchipur 795003, India 2Department of Botany, D.M. College of Science, Imphal 795001, India *Corresponding author A B S T R A C T Auricularia spp. an edible jelly fungus which grows ubiquitously on any decayed K e y w o r d s logs or on dead branches of trees in different forest areas of Manipur. The sporophores of this edible mushroom were tissue cultured and biomass production Auricularia was assessed. In liquid media, Potato dextrose was found to support the maximum delicata, biomass production of three Auricularia species followed by Yeast potato dextrose A. polytricha, in both A. delicata and A. polytricha and Malt extract in A. auricula. Likewise, A. auricula, very good biomass was produced at pH 6.5 for the three species after 10 days of Edible incubation. Both A. delicata and A. polytricha attained their maximum biomass mushroom, production at 280C whereas 300C for A. auricula after 10 days. The biomass Biomass production by the test fungus over a period of 40 days of incubation exhibited production differential response with the maximum mycelial growth of A. delicata in 25 days of incubation whereas 20 days for both A. polytricha and A. auricula respectively. Introduction Auricularia spp.(Jew s ear) are widely These three species, has a very peculiar distributed throughout the tropical and sub- consistency so that the indigenous people of tropical regions of the world (Zoberi, 1972 the state are very fond of taking this fungus and Well, K., 1984). -
Investigations on Diversity of Wood Inhabiting Fungi in Sarkaghat Region of District Mandi, Himachal Pradesh, North-Western Himalaya
J. Biol. Chem. Chron. 2017, 3(1), 41-54 ISSN (Print): 2454 – 7468 ISSN (Online): 2454 - 7476 www.eresearchco/jbcc/ Investigations on Diversity of Wood Inhabiting Fungi in Sarkaghat Region of District Mandi, Himachal Pradesh, North-Western Himalaya Hem Chander*, Shivani Thakur and Shipra Sharma Department of Bio-Sciences, Division Botany, School of Basic and Applied Sciences Career Point University, Hamirpur (H.P.), INDIA. * Correspondance: E-mail: [email protected] (Received 24 May, 2017; Accepted 25 June, 2017; Published 30 June, 2017) ABSTRACT: Wood inhabiting fungi are obligate-parasites of living or dead woody substrates and produce macro- scopic fruiting bodies for reproduction. These fungi produce a variety of hydrolytic/lingocellulolytic enzymes and obtain nutrition for their growth via hydrolysis of wood components (cellulose and lignin). The dead wood inhabit- ing fungi that decompose wood are called wood rot fungi. Owing to the ecological and economic importance and in contrast to the insufficient data available on the geographical distribution, floristic and diversity of wood rot fungi in Sarkaghat region of District Mandi of Himachal Pradesh, the floristic investigations were initiated to describe and preserve the wood inhabiting fungi of this region. During the present investigation, eleven species of wood rot fungi viz. Auricularia auricula-judae (L.:Fr.) Schroet., Fomitopsis dochmia (Berk & Broome) Ryv., Ganoderma lucidum (Leyss.-Curt.:Fr.) Karst., Hexagonia sulcata Berk., Phellinus fastulosus (Lev.) Ryv., Polyporus grammocephalus Berk., P. hirsutus Wulf. ex Fr., Schizophyllum commune Fr.:Fr., Trametes gibbosa (Pers.:Fr.) Fr., T. versicolor (L.:Fr.) Pilat and Xylobolus frustulatus (Pers.) Boidin, belonging to nine genera viz. Auricularia Bull., Fomitopsis Karst., Ganoderma Karst., Phellinus Quél., Hexagonia Fr., Polyporus (Pers.) Gray, Trametes Fr., Schizophyllum Fr. -
Phylogenetic Relationships and Review of the Species
BOTÁNICA-SISTEMÁTICA http://www.icn.unal.edu.co/ Caldasia 33(1):55-66. 2011 PHYLOGENETIC RELATIONSHIPS AND REVIEW OF THE SPECIES OF AURICULARIA (FUNGI: BASIDIOMYCETES) IN COLOMBIA Relaciones fi logenéticas y revisión de las especies del género Auricularia (Fungi: Basidiomycetes) en Colombia ANDRÉS FELIPE MONTOYA-ALVAREZ HIROSHI HAYAKAWA YUKIO MINAMYA TATSUYA FUKUDA Faculty of Agriculture, Kochi University, B200, Monobe, Nankoku, Kochi 783- 8502, Japan. [email protected] CARLOS ALBERTO LÓPEZ-QUINTERO ANA ESPERANZA FRANCO-MOLANO Laboratorio de Taxonomía y Ecología de Hongos, Instituto de Biología, Universidad de Antioquia, Apartado 1226, Medellín, Colombia. ABSTRACT The phylogenetic relationship of the species of the genus Auricularia and its allied taxa were investigated using the internal transcribed spacer (ITS) sequences of nuclear DNA. A molecular phylogenetic tree constructed using a total of 17 samples representing fi ve species and two outgroups indicates that the species of Auricularia form a monophyletic group. Within the genus Auricularia, A. mesenterica is basal and the remaining Auricularia species form three clades; the fi rst clade consists of A. auricula-judae; the second, of A. fuscosuccinea; and the third, of A. polytricha. Key words. Auricularia, taxonomy, phylogeny, Colombia RESUMEN Las relaciones fi logenéticas entre las especies del género Auricularia y especies cercanas se investigaron usando secuencias de ADN nuclear de la región (ITS). Se construyó un árbol fi logenético molecular usando un total de 17 muestras, representando cinco especies, y dos grupos externos. Los resultados indican que las especies del género Auricularia conforman un grupo monofi lético en donde A. mesenterica, se encuentra en la región basal del árbol y las otras especies estudiadas se ubicaron en tres clados. -
Forest Health Technology Enterprise Team Biological Control of Invasive
Forest Health Technology Enterprise Team TECHNOLOGY TRANSFER Biological Control Biological Control of Invasive Plants in the Eastern United States Roy Van Driesche Bernd Blossey Mark Hoddle Suzanne Lyon Richard Reardon Forest Health Technology Enterprise Team—Morgantown, West Virginia United States Forest FHTET-2002-04 Department of Service August 2002 Agriculture BIOLOGICAL CONTROL OF INVASIVE PLANTS IN THE EASTERN UNITED STATES BIOLOGICAL CONTROL OF INVASIVE PLANTS IN THE EASTERN UNITED STATES Technical Coordinators Roy Van Driesche and Suzanne Lyon Department of Entomology, University of Massachusets, Amherst, MA Bernd Blossey Department of Natural Resources, Cornell University, Ithaca, NY Mark Hoddle Department of Entomology, University of California, Riverside, CA Richard Reardon Forest Health Technology Enterprise Team, USDA, Forest Service, Morgantown, WV USDA Forest Service Publication FHTET-2002-04 ACKNOWLEDGMENTS We thank the authors of the individual chap- We would also like to thank the U.S. Depart- ters for their expertise in reviewing and summariz- ment of Agriculture–Forest Service, Forest Health ing the literature and providing current information Technology Enterprise Team, Morgantown, West on biological control of the major invasive plants in Virginia, for providing funding for the preparation the Eastern United States. and printing of this publication. G. Keith Douce, David Moorhead, and Charles Additional copies of this publication can be or- Bargeron of the Bugwood Network, University of dered from the Bulletin Distribution Center, Uni- Georgia (Tifton, Ga.), managed and digitized the pho- versity of Massachusetts, Amherst, MA 01003, (413) tographs and illustrations used in this publication and 545-2717; or Mark Hoddle, Department of Entomol- produced the CD-ROM accompanying this book. -
A Review of the Polysaccharide, Protein and Selected Nutrient Content of Auricularia, and Their Potential Pharmacological Value
Mycosphere 10(1): 579–607 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/10 A review of the polysaccharide, protein and selected nutrient content of Auricularia, and their potential pharmacological value Bandara AR1,2, Rapior S3, Mortimer PE4, Kakumyan P1,2, Hyde KD1,2,4,5, Xu J4,5 1Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 2School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand 3Laboratoire de Botanique, Phytochimie et Mycologie, Faculté de Pharmacie, CEFE CNRS – Université de Montpellier – Université Paul-Valéry Montpellier – EPHE – IRD, B.P. 14491, 15 avenue Charles Flahault, 34093 Montpellier Cedex 5, France 4Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China 5World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, China Bandara AR, Rapior S, Mortimer PE, Kakumyan P, Hyde KD, Xu J 2019 – A review of the polysaccharide, protein and selected nutrient content of Auricularia, and their potential pharmacological value. Mycosphere 10(1), 579–607, Doi 10.5943/mycosphere/10/1/10 Abstract Auricularia is a key genus among edible macrofungi, sourced as either wild or cultivated mushrooms. Auricularia species are utilized as nutrient-rich foods and medicinal resources, with particular prominence in Traditional Asian Medicine. Cultivated Auricularia species can be grown under a wide range of conditions, allowing for production volumes worldwide. Although Auricularia species are used predominantly within the food industry, there is strong potential for their use in the production of therapeutic drugs, thus making it necessary to identify relevant bioactive compounds and further our understanding of its pharmacological properties.