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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
Macquarie Perch Refuge Project – Final Report for Lachlan CMA Author: Luke Pearce, Fisheries Conservation Manager, NSW DPI, Albury
Published by NSW Trade & Investment, Department of Primary Industries First published May 2013 Title: Macquarie Perch Refuge Project – Final Report for Lachlan CMA Author: Luke Pearce, Fisheries Conservation Manager, NSW DPI, Albury. Print: ISBN 978 1 74256 500 2 Web: ISBN: 978 1 74256 501 9 Acknowledgements I thank the Lachlan Catchment Management Authority for providing the funding for the project. I would like to acknowledge the following staff, Fin Martin and Geoff Minchin for their input, assistance, advice and support on this project. The following staff in Fisheries NSW who worked on the project and made it possible; John Pursey, Dean Gilligan, Trevor Daly, Allan Lugg, Sarah Fairfull, Justin Stanger, Tim McGarry, Martin Asmus, Matthew McLellan, Lachie Jess and Antonia Creese. I thank the Recreational Fishing Trust for their ongoing support and funding for the Macquarie Perch captive breeding program; without it there would not be fish to stock into the refuge site. I would also like to acknowledge the Central Acclimatisation Society, in particular Karl Schaerf and Peter Byron for their ongoing support of the project and threatened native fish. TRIM reference: PUB13/61 Jobtrack 12067 © State of New South Wales through the Department of Trade and Investment, Regional Infrastructure and Services, 2013. You may copy, distribute and otherwise freely deal with this publication for any purpose, provided that you attribute the NSW Department of Primary Industries as the owner. Disclaimer: The information contained in this publication is based on knowledge and understanding at the time of writing (May 2013). However, because of advances in knowledge, users are reminded of the need to ensure that information upon which they rely is up to date and to check currency of the information with the appropriate officer of the Department of Primary Industries or the user’s independent adviser. -
Long Swamp Fish and Frog Baseline Survey 2012
AQUASAVE CONSULTANTS Ecology, Monitoring and Conservation A registered business of: Regional, Focussed, On-ground Long Swamp Fish and Frog Baseline Survey 2012 A report to t he Glenelg Hopkins CMA By: Mark Bachmann, Nick Whiterod and Lachlan Farrington January 2013 Aquasave - NGT: Long Swamp Fish and Frog Baseline Survey 2012 This report may be cited as: Bachmann, M., Whiterod, N. & Farrington, L. (2013) Long Swamp Fish and Frog Baseline Survey 2012. A report to the Glenelg Hopkins CMA. Aquasave Consultants – Nature Glenelg Trust. Table of Contents EXECUTIVE SUMMARY .......................................................................................................................... 4 1. Introduction ...................................................................................................................................... 5 2. Site Locations and Sampling Methods .............................................................................................. 5 2.1 Native Fish ........................................................................................................................... 5 2.2 Frogs .................................................................................................................................... 9 3. Results............................................................................................................................................. 11 3.1 Native Fish ........................................................................................................................ -
Gwydir Waterbird and Fish Habitat Study: Final Reportdownload
Gwydir Waterbird and Fish Habitat Study Final report Cover photographs Front page: Boyanga Waterhole, Gingham Watercourse (Credit: J. Spencer); Golden perch, Mehi River (Credit: J. Spencer); Great egret (Credit: M. Carpenter). Citation This report can be cited as follows: Spencer, J.A., Heagney, E.C. and Porter, J.L. 2010. Final report on the Gwydir waterbird and fish habitat study. NSW Wetland Recovery Program. Rivers and Wetlands Unit, Department of Environment, Climate Change and Water NSW and University of New South Wales, Sydney. Acknowledgments Funding for this project was provided by the NSW Government and the Australian Government’s Water for the Future – Water Smart Australia program. Richard Allman, Sharon Bowen, Kirsty Brennan, Ben Daly, Simon Hunter, Jordan Iles, Jeff Kelleway, Lisa Knowles, Yoshi Kobayashi, Natalia Perera, Shannon Simpson, Rachael Thomas (DECCW), Neal Foster (NOW), Gus Porter and Ainslee Lions provided field support. Thanks to our pilots Richard Byrne (DECCW) and James Rainger (Fleet Helicopters) for their assistance with aerial waterbird surveys. Daryl Albertson (DECCW), Neal Foster, Liz Savage and James Houlahan (Border Rivers–Gwydir CMA) and Glenn Wilson (UNE) gave advice on field site locations. Jennifer and Bruce Southeron (Old Dromana), Sam Kirkby (Bunnor), Howard Blackburn (Crinolyn), Bill Johnson (DECCW), Liz Savage (Border Rivers–Gwydir CMA), Neal Foster, Tara Schalk (NOW), Richard Ping Kee (Moree fishing club), Dick Cooper, Greg Clancy and the NSW Bird Atlassers contributed historical information on waterbird and fish populations in the Gwydir. Sue Powell (ANU) supplied information on the flooding history and flow data for the Gwydir Wetlands. Mark McGrouther and Sally Reader (Australian Museum, Sydney) assisted with the identification of fish species. -
Congolli (Pseudaphritis Urvillii) and Australian Salmon (Arripis Truttaceus and A
Inland Waters and Catchment Ecology Diet and trophic characteristics of mulloway (Argyrosomus japonicus), congolli (Pseudaphritis urvillii) and Australian salmon (Arripis truttaceus and A. trutta) in the Coorong George Giatas and Qifeng Ye SARDI Publication No. F2015/000479-1 SARDI Research Report Series No. 858 SARDI Aquatics Sciences PO Box 120 Henley Beach SA 5022 September 2015 Giatas and Ye (2015) Diet of three fish species in the Coorong Diet and trophic characteristics of mulloway (Argyrosomus japonicus), congolli (Pseudaphritis urvillii) and Australian salmon (Arripis truttaceus and A. trutta) in the Coorong George Giatas and Qifeng Ye SARDI Publication No. F2015/000479-1 SARDI Research Report Series No. 858 September 2015 II Giatas and Ye (2015) Diet of three fish species in the Coorong This publication may be cited as: Giatas, G.C. and Ye, Q. (2015). Diet and trophic characteristics of mulloway (Argyrosomus japonicus), congolli (Pseudaphritis urvillii) and Australian salmon (Arripis truttaceus and A. trutta) in the Coorong. South Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2015/000479-1. SARDI Research Report Series No. 858. 81pp. South Australian Research and Development Institute SARDI Aquatic Sciences 2 Hamra Avenue West Beach SA 5024 Telephone: (08) 8207 5400 Facsimile: (08) 8207 5406 http://www.pir.sa.gov.au/research DISCLAIMER The authors warrant that they have taken all reasonable care in producing this report. The report has been through the SARDI internal review process, and has been formally approved for release by the Research Chief, Aquatic Sciences. Although all reasonable efforts have been made to ensure quality, SARDI does not warrant that the information in this report is free from errors or omissions. -
THE BIDGEE BULLETIN Quarterly Newsletter of the Murrumbidgee Monitoring Program
M A R C H 2 0 2 0 I S S U E 3 THE BIDGEE BULLETIN Quarterly Newsletter of the Murrumbidgee Monitoring Program WATERING OUTCOMES Welcome to Issue 3 of The Bidgee Bulletin. The field monitoring season is now complete, with As in previous years Commonwealth environmental water the last of the four wetland surveys conducted is being used to support aquatic plants and animals in the over the last two weeks of March. In this issue Murrumbidgee Selected Area. This year environmental we review the highlights of the season and water was largely used to target floodplains and wetlands summarise the outcomes from Commonwealth to improve water quality, support populations of water environmental watering actions during the 2019- dependent plants and animals, maintain frog populations 20 water year. We also introduce our Chief and create breeding opportunities for threatened species Twitcher from the NSW DPIE, Dr Jennifer including the southern bell frog and Australasian bittern. Spencer. Continued dry conditions in Spring 2019 meant that The Bidgee Bulletin is a quarterly newsletter environmental water needed to be carefully managed and designed to provide updates on our progress as focused on high priority outcomes. These included we monitor the ecological outcomes of maintaining critical refuge habitats - Wagourah Lagoon, Commonwealth environmental water flows in the Yarradda Lagoon, Telephone Creek and Tala Creek. Murrumbidgee Selected Area. The 2019-2022 Maintenance of these wetland habitats is important for program builds on the previous five year native fish and turtles, and the Murrumbidgee refuge sites monitoring period (2014-2019) and uses many continue to support high native fish diversity with large of the same methods. -
Southern Bell Frog
June 2011 South Australian Murray-Darling Basin Natural Resources Management Southern Bell Frog Monitoring (Litoria raniformisBoard) in the Lower Lakes Goolwa River Murray Channel, Tributaries of Currency Creek and Finniss River and Lakes Alexandrina and Albert Kate Mason and Karl Hillyard The project was funded by Department for Environment and Natural Resources, Coorong, Lower Lakes and Murray Mouth Program Cover Photo: Survey site ‘Pelican Lagoon Site 1’ February 2011. This document can be cited as: Mason, K & Hillyard, K. 2011. Southern Bell Frog (L. raniformis) monitoring in the Lower Lakes. Goolwa River Murray Channel, tributaries of Currency Creek and Finniss River and Lakes Alexandrina and Albert. Report to Department for Environment and Natural Resources. The South Australian Murray Darling Basin Natural Resources Management Board, Murray Bridge. South Australia. Disclaimer The authors do not warrant or make any representation regarding the use, or results of the use, of the information contained herein as regards to its correctness, accuracy, reliability, currency or otherwise. The authors expressly disclaim all liability or responsibility to any person using the information or advice. © Government of South Australia This work is copyright. Unless permitted under the Copyright Act 1968 (Cwlth), no part may be reproduced by any process without prior written permission from the Authors and the South Australian Murray-Darling Basin Natural Resources Management Board (SA MDB NRM Board). Requests and inquiries concerning reproduction and rights should be addressed to the SA MDB NRM Board, Mannum Road, Murray Bridge SA 5253 Summary Over the past five years, Lake Alexandrina, Lake Albert and the Eastern Mount Lofty Ranges tributaries experienced significant changes as a result of reduced freshwater flows and over-allocation of water resources and recently, the first stages of recovery to a functioning freshwater and estuary system, following increased freshwater flows into the system. -
W.T. Trueman August 2007
Native Fish Australia Technical Report #2 A REVIEW OF ATTEMPTS AT THE ARTIFICIAL PROPAGATION OF THE MACQUARIE PERCH Macquaria australasica WITH RECOMMENDATIONS FOR FUTURE ACTION W.T. Trueman August 2007 Native Fish Australia Technical Report #2 A REVIEW OF ATTEMPTS AT THE ARTIFICIAL PROPAGATION OF THE MACQUARIE PERCH Macquaria australasica WITH RECOMMENDATIONS FOR FUTURE ACTION W.T. Trueman August 2007 Published by: Native Fish Australia (Victoria) Inc PO Box 162 DONCASTER VIC 3108 Australia E-mail: [email protected] Web: http://www.nativefish.asn.au Copyright © 2007 Apart from fair dealing for the purposes of private study, research, criticism or review as permitted under the Copyright Act, no part of this publication may be reproduced by any means without the permission of the author or Native Fish Australia (Victoria) Incorporated. All photos in this report are those of the author unless otherwise acknowledged. Cover Photo: Adult Macquarie perch. (Photo courtesy Stephen Kerris.) Artificial Propagation Of The Macquarie Perch Macquaria australasica W.T.Trueman Table of Contents Table of Contents ................................................................................................................................... i Preface................................................................................................................................................... ii Introduction ............................................................................................................................................2 -
National Recovery Plan for the Trout Cod Maccullochella Macquariensis
National Recovery Plan for the Trout Cod Maccullochella macquariensis Trout Cod Recovery Team Published by the Victorian Government Department of Sustainability and Environment (DSE) Melbourne, 2008. © State of Victoria Department of Sustainability and Environment 2008 This publication is copyright. No part may be reproduced by any process except in accordance with the provisions of the Copyright Act 1968. Authorised by the Victorian Government, 8 Nicholson Street, East Melbourne. ISBN 1 74152 410 5 This is a Recovery Plan prepared under the Commonwealth Environment Protection and Biodiversity Conservation Act 1999, with the assistance of funding provided by the Australian Government. This Recovery Plan has been developed with the involvement and cooperation of a range of stakeholders, but individual stakeholders have not necessarily committed to undertaking specific actions. The attainment of objectives and the provision of funds may be subject to budgetary and other constraints affecting the parties involved. Proposed actions may be subject to modification over the life of the plan due to changes in knowledge. Disclaimer This publication may be of assistance to you but the State of Victoria and its employees do not guarantee that the publication is without flaw of any kind or is wholly appropriate for your particular purposes and therefore disclaims all liability for any error, loss or other consequence that may arise from you relying on any information in this publication. An electronic version of this document is available on the Department of the Environment, Water, Heritage and the Arts website www.environment.gov.au For more information contact the DSE Customer Service Centre 136 186 Citation: Trout Cod Recovery Team 2008a. -
Laboratory Evaluation of the Predation Efficacy of Native Australian Fish on Culex Annulirostris (Diptera: Culicidae)
Journal of the Americctn Mosquito Control Association, 20(3):2g6_291,2OO4 Copyright A 2OO4by the American Mosquib Control Association, Inc. LABORATORY EVALUATION OF THE PREDATION EFFICACY OF NATIVE AUSTRALIAN FISH ON CULEX ANNULIROSTRIS (DIPTERA: CULICIDAE) TIMOTHY P HURST, MICHAEL D. BRowNI eNo BRIAN H. KAY Australian Centre International for and Tropical Health and Nutrition at the eueensland Institute of Medical pO Research, Royal Brisbane H<tspital, eueensland 4029, Austalia ABSTRACT. The introduction and establishment of fish populations can provide long-term, cost-effective mosquito control in habitats such as constructed wetlands and ornamental lakes. The p.idution efficacy of 7 native Brisbane freshwater fish on I st and 4th instars of the freshwater arbovirus vector culex annulirostris was evaluated in a series of 24-h laboratory trials. The trials were conducted in 30-liter plastic carboys at 25 + l"C urder a light:dark cycle of l4:10 h. The predation eflcacy of native crimson-spotted rainbowfish Melanotaenia (Melanotaeniidae), cluboulayi Australian smelt Retropinna semoni (Retropinnadae), pacific blue-eye pseudomugil (Atherinidae), signfer fly-specked hardyhead Craterocephalus stercusmLtscarum (Atherinidae), hretail gudgeon Hypseleotris gttlii (Eleotridae), empire gudgeon Hypseleotris compressa (Eleotridae), and estuary percilet Am- bassis marianus (Ambassidae) was compared with the exotic eaitern mosquitofish Getmbusia iolbrooki (poe- ciliidae). This environmentally damaging exotic has been disseminated worldwide and has been declared noxrous in Queensland. Melanotaenia duboulayi was found to consume the greatest numbers of both lst and 4th instars of Cx. annuliro.t/ri.t. The predation efficacy of the remaining Australian native species was comparable with that of the exotic G. holbrooki. With the exception of A- marianu^s, the maximum predation rates of these native species were not statistically different whether tested individually or in a school of 6. -
REVOLUTIONISING Inland Fish Production and Stocking in Victoria “WE GROW YOUR FISH”
REVOLUTIONISING Inland Fish Production and Stocking in Victoria “WE GROW YOUR FISH” Prepared by the Snobs Creek Advisory Board Introduction The Victorian Fisheries Authority (VFA) has a long and successful history of growing and stocking fish to recover threatened species, build fish populations and create fantastic recreational fishing opportunities in Victoria. Most of our waterways are heavily modified and no longer consistently provide conditions that support natural breeding for fish. Therefore, fish stocking is an essential and powerful tool for maintaining fish populations and good fishing, alongside river restoration activities including habitat rehabilitation and environmental flows. In Victoria over 200 waters are stocked annually with twelve different fish species. These include both native threatened fish such as Murray cod, golden perch, trout cod, Macquarie perch, silver perch, catfish, Australian bass, and estuary perch, and popular introduced recreational fish species such as brown trout, rainbow trout, chinook salmon, brook trout. Current fish stocking in Victoria ¡[ Mixed Mildura ¡[ ¡[ ¡[ Mixed Mildura¡[ Family Fishing Waters ¡[ ¡[ ¡[ Family Fishing Waters ¡[ Estuarine ¡[ Estuarine ¡[ ¡[ Native ¡[ Mixed ¡[ Native MilduraSwan Hill ¡[ Salmonid ¡[ ¡[ ¡[ ¡[Swan HillFamily Fishing Waters ¡[ Salmonid ¡[¡[ ¡[ ¡[Kerang ¡[ ¡[¡[¡[ Estuarine ¡[ ¡[ ¡[¡[ ¡[ ¡[Kerang ¡[ ¡[ [ ¡[ ¡[ ¡[ ¡[ ¡[¡ [¡[Wodonga¡[ ¡[¡[ Native¡[ ¡[ ¡[ ¡[ ¡[¡[ ¡[ ¡[¡[ ¡[ ¡[ ¡[ ¡[ ¡[ ¡[ ¡[ ¡[ ¡[¡[ Wodonga ¡[ ¡[ ¡[ ¡[ ¡[ ¡[[Shepparton ¡[ ¡[ ¡[¡[ ¡[ ¡[ ¡[ ¡[ ¡[ ¡[¡[ -
Stock Assessment of Golden Perch for PIRSA
Ferguson and Ye 2012 Stock assessment of golden perch for PIRSA Stock Assessment of Golden perch (Macquaria ambigua) G.J Ferguson and Q. Ye SARDI Publication No. F2007/001051-1 SARDI Research Report Series No. 656 SARDI Aquatic Sciences PO Box 120 Henley Beach SA 5022 October 2012 Fishery Stock Assessment Report to PIRSA Fisheries and Aquaculture 1 Ferguson and Ye 2012 Stock assessment of golden perch for PIRSA Stock Assessment of Golden perch (Macquaria ambigua) Fishery Stock Assessment Report to PIRSA Fisheries and Aquaculture G.J Ferguson and Q. Ye SARDI Publication No. F2007/001051-1 SARDI Research Report Series No. 656 October 2012 2 Ferguson and Ye 2012 Stock assessment of golden perch for PIRSA This publication may be cited as: Ferguson, G. J. and Ye, Q (2012). Stock Assessment of Golden perch (Macquaria ambigua). Stock Assessment Report for PIRSA Fisheries and Aquaculture. South Australian Research and Development Institute (Aquatic Sciences), Adelaide. F2007/01051- 1. SARDI Research Report Series No. 656. 55pp. South Australian Research and Development Institute SARDI Aquatic Sciences 2 Hamra Avenue West Beach SA 5024 Telephone: (08) 8207 5400 Facsimile: (08) 8207 5406 http://www.sardi.sa.gov.au DISCLAIMER The authors warrant that they have taken all reasonable care in producing this report. The report has been through the SARDI Aquatic Sciences internal review process, and has been formally approved for release by the Research Chief, Aquatic Sciences. Although all reasonable efforts have been made to ensure quality, SARDI Aquatic Sciences does not warrant that the information in this report is free from errors or omissions.