Raman Optical Activity: a Novel Version of Chiroptical Spectroscopy
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Polarization- and Angular-Resolved Optical Response of Molecules on Anisotropic Plasmonic Nanostructures
nanomaterials Review Polarization- and Angular-Resolved Optical Response of Molecules on Anisotropic Plasmonic Nanostructures Martin Šubr * and Marek Procházka * ID Faculty of Mathematics and Physics, Institute of Physics, Charles University, 121 16 Prague 2, Czech Republic * Correspondence: [email protected] (M.S.); [email protected] (M.P.); Tel.: +420-221-911-463 (M.S.); +420-221-911-474 (M.P.) Received: 10 May 2018; Accepted: 7 June 2018; Published: 9 June 2018 Abstract: A sometimes overlooked degree of freedom in the design of many spectroscopic (mainly Raman) experiments involve the choice of experimental geometry and polarization arrangement used. Although these aspects usually play a rather minor role, their neglect may result in a misinterpretation of the experimental results. It is well known that polarization- and/or angular- resolved spectroscopic experiments allow one to classify the symmetry of the vibrations involved or the molecular orientation with respect to a smooth surface. However, very low detection limits in surface-enhancing spectroscopic techniques are often accompanied by a complete or partial loss of this detailed information. In this review, we will try to elucidate the extent to which this approach can be generalized for molecules adsorbed on plasmonic nanostructures. We will provide a detailed summary of the state-of-the-art experimental findings for a range of plasmonic platforms used in the last ~15 years. Possible implications on the design of plasmon-based molecular sensors for maximum signal enhancement will also be discussed. Keywords: SERS; Raman; plasmonics; metallic nanostructures; polarization and angular dependences; molecular orientation; ellipsometry 1. Introduction Methods of optical spectroscopy, such as absorption spectroscopy, Raman scattering spectroscopy or fluorescence spectroscopy, can be performed in a wide range of experimental setups relying on a proper choice of instrumentation, light sources, waveguides, monochromators, detectors etc. -
Raman Spectra of Methane, Ethylene, Ethane, Dimethyl Ether, Formaldehyde and Propane for Combustion Applications
Raman Spectra of Methane, Ethylene, Ethane, Dimethyl ether, Formaldehyde and Propane for Combustion Applications Item Type Article Authors Magnotti, G.; KC, Utsav; Varghese, P.L.; Barlow, R.S. Citation Raman Spectra of Methane, Ethylene, Ethane, Dimethyl ether, Formaldehyde and Propane for Combustion Applications 2015 Journal of Quantitative Spectroscopy and Radiative Transfer Eprint version Post-print DOI 10.1016/j.jqsrt.2015.04.018 Publisher Elsevier BV Journal Journal of Quantitative Spectroscopy and Radiative Transfer Rights NOTICE: this is the author’s version of a work that was accepted for publication in Journal of Quantitative Spectroscopy and Radiative Transfer. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. A definitive version was subsequently published in Journal of Quantitative Spectroscopy and Radiative Transfer, 8 May 2015. DOI: 10.1016/ j.jqsrt.2015.04.018 Download date 04/10/2021 05:45:56 Link to Item http://hdl.handle.net/10754/552799 Author's Accepted Manuscript Raman Spectra of Methane, Ethylene, Ethane, Dimethyl ether, Formaldehyde and Propane for Combustion Applications G. Magnotti, U. KC, P.L. Varghese, R.S. Barlow www.elsevier.com/locate/jqsrt PII: S0022-4073(15)00169-7 DOI: http://dx.doi.org/10.1016/j.jqsrt.2015.04.018 Reference: JQSRT4982 To appear in: Journal of Quantitative Spectroscopy & Radiative Transfer Received date: 21 January 2015 Revised date: 27 April 2015 Accepted date: 28 April 2015 Cite this article as: G. -
Determination of Polypeptide Conformation with Nanoscale
Determination of Polypeptide Conformation with Nanoscale Resolution in Water Georg Ramer,[a,b]+ Francesco Simone Ruggeri,[c]+ Aviad Levin[c] , Tuomas P.J. Knowles[cd] & Andrea Centrone*[a] [a] Center for Nanoscale Science and Technology, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, United States [b] Institute for Research in Electronics and Applied Physics, University of Maryland, College Park, MD 20742, United States [c] Department of Chemistry, University of Cambridge, Cambridge, United Kingdom, CB30FT [d] Cavendish laboratory, Department of Physics, J J Thomson Avenue, CB3 1HE, Cambridge United Kingdom Corresponding author E-mail: [email protected] Abstract: The folding and acquisition of native structure of proteins is central to all biological processes of life. By contrast, protein misfolding can lead to toxic amyloid aggregates formation, linked to the onset of 1 neurodegenerative disorders. To shed light on the molecular basis of protein function and malfunction, it is crucial to access structural information of single protein assemblies and aggregates under native conditions. Yet, current conformation-sensitive spectroscopic methods lack the spatial resolution and sensitivity necessary for characterizing heterogeneous protein aggregates in solution. To overcome this limitation, here we use photothermal induced resonance (PTIR) to demonstrate that it is possible to acquire nanoscale infrared spectra in water with high signal to noise ratio (SNR). Using this approach, we probe supramolecular aggregates of diphenylalanine, the core recognition module of the Alzheimer's disease β-amyloid peptide, and its derivative Boc-diphenylalanine. We achieve nanoscale resolved IR spectra and maps in air and water with comparable SNR and lateral resolution, thus enabling accurate identification of the chemical and structural state of morphologically similar networks at the single aggregate (i.e. -
Strongly Enhanced Raman Optical Activity in Molecules by Magnetic Response of Nanoparticles
Strongly Enhanced Raman Optical Activity in Molecules by Magnetic Response of Nanoparticles Tong Wu1, Xiuhui Zhang2, Rongyao Wang1 and Xiangdong Zhang1* 1School of Physics and Beijing Key Laboratory of Nanophotonics & Ultrafine Optoelectronic Systems,Beijing Institute of Technology, Beijing, 100081, China 2School of Chemistry and Key Laboratory of Cluster Science of Ministry of Education, Beijing Institute of Technology, Beijing, 100081, China ABSTRACT: An analytical theory for the surface-enhanced Raman optical activity (SEROA) with the magnetic response of the substrate particle has been presented. We have demonstrated that the SEROA signal is proportional to the magnetic polarizability of the substrate particle, which can be significantly enhanced due to the existence of the magnetic response. At the same time, a large circular intensity difference (CID) for the SEROA can also be achieved in the presence of the magnetic response. Taking Si nanoparticles as examples, we have found that the CID enhanced by a Si nanoparticle is 10 times larger than that of Au. Furthermore, when the molecule is located in the hotspot of a Si dimer, CID can be 60 times larger. The phenomena originate from large magnetic fields concentrated near the nanoparticle and boosted magnetic dipole emission of the molecule. The symmetric breaking of the electric fields caused by the magnetic dipole response of the nanoparticle also plays an important role. Our findings provide a new way to tailor the Raman optical activity by designing metamaterials with the strong magnetic response. I.INTRODUCTION Chirality plays a crucial role in modern biochemistry and the evolution of life.1 Many biologically active molecules are chiral, detection and quantification of chiral enantiomers of these biomolecules are of considerable importance. -
Uncompensated Antiferromagnetic Spins at the Interface in Mn-Ir Based Exchange Biased Bilayers
CORE Metadata, citation and similar papers at core.ac.uk Uncompensated antiferromagnetic spins at the interface in Mn-Ir based exchange biased bilayers 著者 角田 匡清 journal or Journal of applied physics publication title volume 101 number 9 page range 09E510-1-09E510-3 year 2007 URL http://hdl.handle.net/10097/35381 doi: 10.1063/1.2710216 JOURNAL OF APPLIED PHYSICS 101, 09E510 ͑2007͒ Uncompensated antiferromagnetic spins at the interface in Mn–Ir based exchange biased bilayers ͒ M. Tsunoda,a S. Yoshitaki, and Y. Ashizawa Department of Electronic Engineering, Tohoku University, Sendai 980-8579, Japan C. Mitsumata Advanced Electronics Research Laboratory, Hitachi Metals Ltd., Kumagaya 360-0843, Japan and New Industry Creation Hatchery Center, Tohoku University, Sendai 980-8579, Japan T. Nakamura, H. Osawa, and T. Hirono JASRI/SPring-8, 1-1-1 Kouto, Sayo-cho 679-5198, Japan D. Y. Kim and M. Takahashi New Industry Creation Hatchery Center, Tohoku University, Sendai 980-8579, Japan ͑Presented on 9 January 2007; received 27 October 2006; accepted 27 November 2006; published online 12 April 2007͒ The microscopic origin of the uncompensated antiferromagnetic ͑AFM͒ spins was investigated by means of the x-ray magnetic circular dichroism ͑XMCD͒ spectroscopy with transmission mode for Mn–Ir/ferromagnetic ͑FM͒ bilayers. As the AFM layer thickness increases, resonant absorption magnitude of Mn L edge naturally increases, but the XMCD magnitude does not change so much. When the FM layer material is modified, the XMCD signal of Mn L edge drastically changes not only in its magnitude but also in its sign. The XMCD signal vanishes without the FM layer. -
Recent Applications of Advanced Atomic Force Microscopy in Polymer Science: a Review
polymers Review Recent Applications of Advanced Atomic Force Microscopy in Polymer Science: A Review Phuong Nguyen-Tri 1,2,*, Payman Ghassemi 2, Pascal Carriere 3, Sonil Nanda 4 , Aymen Amine Assadi 5 and Dinh Duc Nguyen 6,7 1 Institute of Research and Development, Duy Tan University, Da Nang 550000, Vietnam 2 Département de Chimie, Biochimie et Physique, Université du Québec à Trois-Rivières (UQTR), Trois-Rivières, QC G8Z 4M3, Canada; [email protected] 3 Laboratoire MAPIEM (EA 4323), Matériaux Polymères Interfaces Environnement Marin, Université de Toulon, CEDEX 9, 83041 Toulon, France; [email protected] 4 Department of Chemical and Biological Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A2, Canada; [email protected] 5 ENSCR—Institut des Sciences Chimiques de Rennes (ISCR)—UMR CNRS 6226, Univ Rennes, 35700 Rennes, France; [email protected] 6 Faculty of Environmental and Food Engineering, Nguyen Tat Thanh University, 300A Nguyen Tat Thanh, District 4, Ho Chi Minh City 755414, Vietnam; [email protected] 7 Department of Environmental Energy Engineering, Kyonggi University, Suwon 16227, Korea * Correspondence: [email protected]; Tel.: +819-376-5011 (ext. 4505) Received: 5 March 2020; Accepted: 13 May 2020; Published: 17 May 2020 Abstract: Atomic force microscopy (AFM) has been extensively used for the nanoscale characterization of polymeric materials. The coupling of AFM with infrared spectroscope (AFM-IR) provides another advantage to the chemical analyses and thus helps to shed light upon the study of polymers. This paper reviews some recent progress in the application of AFM and AFM-IR in polymer science. -
Circular Dichroism Spectroscopy in the Undergraduate Curriculum Adam R
Trinity University Digital Commons @ Trinity Chemistry Faculty Research Chemistry Department 9-1-2010 Circular Dichroism Spectroscopy in the Undergraduate Curriculum Adam R. Urbach Trinity University, [email protected] Follow this and additional works at: https://digitalcommons.trinity.edu/chem_faculty Part of the Chemistry Commons Repository Citation Urbach, A. R. (2010). Circular dichroism spectroscopy in the undergraduate curriculum. Journal of Chemical Education, 87(9), 891-893. doi: 10.1021/ed1005954 This Post-Print is brought to you for free and open access by the Chemistry Department at Digital Commons @ Trinity. It has been accepted for inclusion in Chemistry Faculty Research by an authorized administrator of Digital Commons @ Trinity. For more information, please contact [email protected]. Circular Dichroism Spectroscopy in the Undergraduate Curriculum Adam R. Urbach Department of Chemistry, Trinity University, San Antonio, TX 78212 [email protected] Adam R. Urbach is Associate Professor of Chemistry at Trinity University, specializing in bioorganic chemistry. His group applies circular dichroism spectroscopy to studies on the molecular recognition of proteins and nucleic acids by designed molecules. Circular dichroism spectropolarimetry (CD) is a method of optical spectroscopy that seems in most practical ways like UV–visible spectroscopy. The main difference between the two methods is that CD, instead of measuring the absorbance of light as a function of wavelength, measures the difference in absorbance of left versus right circularly polarized light as a function of wavelength. A CD spectrum is an observation of the structure of a chiral compound; it often serves as a “fingerprint” of the structure of biological molecules such as proteins and nucleic acids. -
Construction of a New Forward and Backward Scat-Tering Raman Optical
D´epartement de Chimie Universit´ede Fribourg (Suisse) Construction of a New Forward and Backward Scattering Raman Optical Activity Spectrometer and Graphical Analysis of Measured and Calculated Spectra for 2 2 2 (R)-[ H1, H2, H3]-Neopentane these` pr´esent´ee `ala facult´edes Sciences de l’Universit´e de Fribourg (Suisse) pour l’obtention du grade de Doctor rerum naturalium JACQUES HAESLER de Lutschental¨ (BE) Th`ese N° 1509 Imprimerie St-Paul, Fribourg 2006 Accept´ee par la Facult´edes Sciences de l’Universit´ede Fribourg (Suisse) sur la proposition du jury compos´ede MM. Composition du Jury : Prof. Dr. T. A. Jenny, Universit´ede Fribourg, pr´esident du jury, Prof. Dr. W. Hug, Universit´ede Fribourg, D´epartement de Chimie, directeur de th`ese, rapporteur, Prof. Dr. A. Weis, Universit´ede Fribourg, D´epartement de Physique, corapporteur, Prof. Dr. B. Champagne, Facult´es Universitaires Notre-Dame de la Paix, Laboratoire de Chimie Th´eorique Appliqu´ee, Namur (Belgique), corapporteur. Fribourg, le 16 mars 2006. Le Directeur de th`ese Le Doyen Prof. Dr. Werner Hug Prof. Marco Celio A` Marcel, parti trop tˆot. Table of Contents Table of Contents i Acknowledgments v R´esum´e vii Abstract ix I Introduction 1 1 Introduction to Raman Optical Activity 3 1.1 Optical Activity and Chirality ................... 3 1.2 Chirality in Everyday Life ..................... 6 1.3 Raman and ROA in Short ..................... 8 1.3.1 Vibrational Raman Scattering ............... 8 1.3.2 Raman Optical Activity (ROA) .............. 10 1.3.3 Theoretical Aspects ..................... 11 1.3.4 Experimental Aspects ................... 12 1.3.5 Computational Aspects .................. -
Quantitative Analysis of Light Scattering in Polarization-Resolved Nonlinear Microscopy Hilton B
Quantitative analysis of light scattering in polarization-resolved nonlinear microscopy Hilton B. de Aguiar, Paulina Gasecka, Sophie Brasselet To cite this version: Hilton B. de Aguiar, Paulina Gasecka, Sophie Brasselet. Quantitative analysis of light scattering in polarization-resolved nonlinear microscopy. Optics Express, Optical Society of America - OSA Publishing, 2015, 23, pp.8960-8973. 10.1364/OE.23.008960. hal-01216129 HAL Id: hal-01216129 https://hal-amu.archives-ouvertes.fr/hal-01216129 Submitted on 15 Oct 2015 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Quantitative analysis of light scattering in polarization-resolved nonlinear microscopy Hilton B. de Aguiar,1,∗ Paulina Gasecka1 and Sophie Brasselet1,2 1Aix-Marseille Universite,´ CNRS, Centrale Marseille, Institut Fresnel UMR 7249, 13013 Marseille, France [email protected] ∗[email protected] Abstract: Polarization resolved nonlinear microscopy (PRNM) is a powerful technique to gain microscopic structural information in biological media. However, deep imaging in a variety of biological specimens is hindered by light scattering phenomena, which not only degrades the image quality but also affects the polarization state purity. In order to quantify this phenomenon and give a framework for polarization resolved microscopy in thick scattering tissues, we develop a characterization methodology based on four wave mixing (FWM) process. -
An Empirical Approach to the Bond Additivity Model in Quantitative
An Empirical Approach to the Bond Additivity Model in Quantitative Interpretation of Sum Frequency Generation Vibrational Spectra Hui Wua†, Wen-kai Zhangb†, Wei Ganb, Zhi-feng Cuia, and Hong-fei Wanga,b∗ a. Department of Physics, Anhui Normal University, Wuhu, Anhui Province, China 241000; b. State Key Laboratory of Molecular Reaction Dynamics, Institute of Chemistry, the Chinese Academy of Sciences, Beijing, China, 100080 (Dated: October 29, 2018) Knowledge of the ratios between different polarizability βi′j′k′ tensor elements of a chemical group in a molecule is crucial for quantitative interpretation and polarization analysis of its SFG- VS spectrum at interfaces. The bond additivity model or the hyperpolarizability derivative model along with experimentally obtained Raman depolarization ratios has been widely used to obtain such tensor ratios for the CH3, CH2, and CH groups. Successfully, such treatment can quantitatively reproduce the intensity polarization dependence in SFG-VS spectra for the symmetric (ss) and asymmetric (as) stretching modes of CH3 and CH2 groups, respectively. However, the relative intensity between the ss and as modes usually does not agree with each other within this model even for some of the simplest molecular systems, such as the air/methanol interface. This fact certainly has cast uncertainties on the effectiveness and conclusions based on the bond additivity model. One of such examples is that the as mode of CH3 group has never been observed in SFG- VS spectra from the air/methanol interface, while this as mode is usually very strong for SFG-VS spectra from the air/ethanol, other short chain alcohol, as well as long chain surfactants, interfaces. -
Spectroscopic Studies of Bacterial Iron-Sulfur Proteins (Electron Paramagnetic Resonance, Magnetic Circular Dichroism)
Louisiana State University LSU Digital Commons LSU Historical Dissertations and Theses Graduate School 1986 Spectroscopic Studies of Bacterial Iron-Sulfur Proteins (Electron Paramagnetic Resonance, Magnetic Circular Dichroism). Deborah Ellen Bennett Louisiana State University and Agricultural & Mechanical College Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_disstheses Recommended Citation Bennett, Deborah Ellen, "Spectroscopic Studies of Bacterial Iron-Sulfur Proteins (Electron Paramagnetic Resonance, Magnetic Circular Dichroism)." (1986). LSU Historical Dissertations and Theses. 4173. https://digitalcommons.lsu.edu/gradschool_disstheses/4173 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Historical Dissertations and Theses by an authorized administrator of LSU Digital Commons. For more information, please contact [email protected]. INFORMATION TO U SERS This reproduction was made from a copy of a manuscript sent to us for publication and microfilming. While the most advanced technology has been used to pho tograph and reproduce this manuscript, the quality of the reproduction is heavily dependent upon the quality of the material submitted. Pages in any manuscript may have indistinct print. In all cases the best available copy has been filmed. The following explanation of techniques is provided to help clarify notations which may appear on this reproduction. 1. Manuscripts may not always be complete. When it is not possible to obtain missing pages, a note appears to indicate this. 2. When copyrighted materials are removed from the manuscript, a note ap pears to indicate this. 3. Oversize materials (maps, drawings, and charts) are photographed by sec tioning the original, beginning at the upper left hand comer and continu ing from left to right in equal sections with small overlaps. -
Angular Momentum-Induced Circular Dichroism in Non-Chiral Nanostructures
ARTICLE Received 5 Mar 2014 | Accepted 6 Aug 2014 | Published 12 Sep 2014 DOI: 10.1038/ncomms5922 Angular momentum-induced circular dichroism in non-chiral nanostructures Xavier Zambrana-Puyalto1,2, Xavier Vidal1 & Gabriel Molina-Terriza1,2 Circular dichroism, that is, the differential absorption of a system to left and right circularly polarized light, is one of the only techniques capable of providing morphological information of certain samples. In biology, for instance, circular dichroism spectroscopy is widely used to study the structure of proteins. More recently, it has also been used to characterize metamaterials and plasmonic structures. Typically, circular dichorism can only be observed in chiral objects. Here we present experimental results showing that a non-chiral sample such as a subwavelength circular nanoaperture can produce giant circular dichroism when a vortex beam is used to excite it. These measurements can be understood by studying the symmetries of the sample and the total angular momentum that vortex beams carry. Our results show that circular dichroism can provide a wealth of information about the sample when combined with the control of the total angular momentum of the input field. 1 Department of Physics and Astronomy, Macquarie University, New South Wales 2109, Australia. 2 ARC Centre for Engineered Quantum Systems, Macquarie University, New South Wales 2109, Australia. Correspondence and requests for materials should be addressed to G.M.-T. (email: [email protected]). NATURE COMMUNICATIONS | 5:4922 | DOI: 10.1038/ncomms5922 | www.nature.com/naturecommunications 1 & 2014 Macmillan Publishers Limited. All rights reserved. ARTICLE NATURE COMMUNICATIONS | DOI: 10.1038/ncomms5922 ince its discovery in the nineteenthth century, circular if the two (left and right) circularly polarized modes are vortex dichroism (CD) has been widely used in science.