Secondary Sympatric Occurrence of Sibling Species of Subterranean Shrimps in the Karst
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A Classification of Living and Fossil Genera of Decapod Crustaceans
RAFFLES BULLETIN OF ZOOLOGY 2009 Supplement No. 21: 1–109 Date of Publication: 15 Sep.2009 © National University of Singapore A CLASSIFICATION OF LIVING AND FOSSIL GENERA OF DECAPOD CRUSTACEANS Sammy De Grave1, N. Dean Pentcheff 2, Shane T. Ahyong3, Tin-Yam Chan4, Keith A. Crandall5, Peter C. Dworschak6, Darryl L. Felder7, Rodney M. Feldmann8, Charles H. J. M. Fransen9, Laura Y. D. Goulding1, Rafael Lemaitre10, Martyn E. Y. Low11, Joel W. Martin2, Peter K. L. Ng11, Carrie E. Schweitzer12, S. H. Tan11, Dale Tshudy13, Regina Wetzer2 1Oxford University Museum of Natural History, Parks Road, Oxford, OX1 3PW, United Kingdom [email protected] [email protected] 2Natural History Museum of Los Angeles County, 900 Exposition Blvd., Los Angeles, CA 90007 United States of America [email protected] [email protected] [email protected] 3Marine Biodiversity and Biosecurity, NIWA, Private Bag 14901, Kilbirnie Wellington, New Zealand [email protected] 4Institute of Marine Biology, National Taiwan Ocean University, Keelung 20224, Taiwan, Republic of China [email protected] 5Department of Biology and Monte L. Bean Life Science Museum, Brigham Young University, Provo, UT 84602 United States of America [email protected] 6Dritte Zoologische Abteilung, Naturhistorisches Museum, Wien, Austria [email protected] 7Department of Biology, University of Louisiana, Lafayette, LA 70504 United States of America [email protected] 8Department of Geology, Kent State University, Kent, OH 44242 United States of America [email protected] 9Nationaal Natuurhistorisch Museum, P. O. Box 9517, 2300 RA Leiden, The Netherlands [email protected] 10Invertebrate Zoology, Smithsonian Institution, National Museum of Natural History, 10th and Constitution Avenue, Washington, DC 20560 United States of America [email protected] 11Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543 [email protected] [email protected] [email protected] 12Department of Geology, Kent State University Stark Campus, 6000 Frank Ave. -
Cave Shrimps Troglocaris S. Str. (Dormitzer, 1853), Taxonomic Revision and Description of New Taxa After Phylogenetic and Morphometric Studies
Zootaxa 3421: 1–31 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) Cave shrimps Troglocaris s. str. (Dormitzer, 1853), taxonomic revision and description of new taxa after phylogenetic and morphometric studies JURE JUGOVIC1,2*, BRANKO JALŽIĆ3, SIMONA PREVORČNIK4 & BORIS SKET5 1,4,5 Univerza v Ljubljani, Biotehniška fakulteta, Oddelek za biologijo, Večna pot 111, 1000 Ljubljana, Slovenia. 2 Univerza na Primorskem, Znanstveno raziskovalno središče, Garibaldijeva 1, 6000 Koper, Slovenia & Univerza na Primorskem, Fakulteta za matematiko, naravoslovje in informacijske tehnologije, Glagoljaška 8, 6000 Koper 3 Hrvatski prirodoslovni muzej, Demetrova 1, 10000 Zagreb, Croatia. E-mail addresses: 1 [email protected]; [email protected]; 3 [email protected]; 4 [email protected]; 5 [email protected] * Corresponding author Abstract Within the Dinaric genus Troglocaris cave shrimps from the subgenus Troglocaris s. str. (Dormitzer, 1853) (Crustacea: Decapoda: Atyidae), have the widest distribution area. The recent molecular analyses have revealed significant, cryptic diversity in the subgenus. The aim of the subsequent detailed morphometric analyses was the provision of the appropriate diagnosable characters for the discovered lineages, i.e. taking care of their taxonomical visibility. We herein designate a neotype and provide a detailed description for the polytipic type species of the genus T. (T.) anophthalmus (Kollar, 1848), to enable its morphological distinction from the erroneously described T. (T.) planinensis Birštejn, 1948. Considering a combination of morphological, geographical and molecular data, we describe four new subspecies: T. (T.) a. ocellata ssp. -
Phylogeography of the Cave Shrimp Troglocaris Anophthalmus (Crustacea: Decapoda: Atyidae)
Molecular Ecology (2009) 18, 931–946 doi: 10.1111/j.1365-294X.2008.04061.x TheBlackwell Publishing Ltd limits of cryptic diversity in groundwater: phylogeography of the cave shrimp Troglocaris anophthalmus (Crustacea: Decapoda: Atyidae) VALERIJA ZAKŠEK,* BORIS SKET,* SANJA GOTTSTEIN,† DAMJAN FRANJEVIC† and PETER TRONTELJ* *Department of Biology, Biotechnical Faculty, University of Ljubljana, PO Box 2995, SI-1001 Ljubljana, Slovenia, †Department of Zoology, Faculty of Science, University of Zagreb, Roosveltov trg 6, 10000 Zagreb, Croatia Abstract Recent studies have revealed high local diversity and endemism in groundwaters, and showed that species with large ranges are extremely rare. One of such species is the cave shrimp Troglocaris anophthalmus from the Dinaric Karst on the western Balkan Peninsula, apparently uniform across a range of more than 500 kilometres. As such it contradicts the paradigm that subterranean organisms form localized, long-term stable populations that cannot disperse over long distances. We tested it for possible cryptic diversity and/or un- expected evolutionary processes, analysing mitochondrial (COI, 16S rRNA) and nuclear (ITS2) genes of 232 specimens from the entire range. The results of an array of phylogeo- graphical procedures congruently suggested that the picture of a widespread, continuously distributed and homogenous T. anophthalmus was wrong. The taxon is composed of four or possibly five monophyletic, geographically defined phylogroups that meet several species delimitation criteria, two of them showing evidence of biological reproductive isolation in sympatry. COI genetic distances between phylogroups turned out to be a poor predictor, as they were much lower than the sometimes suggested crustacean threshold value of 0.16 substitutions per site. -
Perspectives on Typhlatya (Crustacea, Decapoda)
Contributions to Zoology, 65 (2) 79-99 (1995) SPB Academic Publishing bv, Amsterdam New perspectives on the evolution of the genus Typhlatya (Crustacea, Decapoda): first record of a cavernicolous atyid in the Iberian Peninsula, Typhlatya miravetensis n. sp. Sebastián Sanz & Dirk Platvoet 1 Unitat d'Ecologia, Facultat de Ciències Biologiques, Universitat de Valencia, E-46100 Burjassot, 2 Valencia, Spain; Institutefor Systematics and Population Biology (Zoological Museum, Amsterdam), University of Amsterdam, P.O. Box 94766, 1090 GT Amsterdam, The Netherlands Keywords: Typhlatya, Decapoda, Spain, subterranean waters, systematics, zoogeography, vicariance, evolution, key to genus Abstract historia geológica de la zona y la distribución mundial del género, del grupo de géneros, y la familia. On several occasions, shrimps belonging to a new species ofthe genus Typhlatya were collected in a cave in the province of Castellón, Spain. This is the first record of the in the genus Introduction Iberian Peninsula. The species is described and the validity, dis- tribution, and zoogeography of the genus, as well as the status In 1993 and were on several of the discussed. 1994, shrimps caught genus Spelaeocaris, are Former models for the occasions in in the evolution of the genus Typhlatya and its genus group are re- a cave near Cabanes, province viewed, as well asthe system ofinner classification of the Atyidae of Castellón, eastern Spain. The specimens belong and its For the and evolution of biogeographical meaning. age the to genus Typhlatya Creaser, 1936, a genus the genus we developed a new model based on vicariance prin- with members known from the Galápagos Islands, ciples that involves further evolution of each species after the Ascension and the Caribbean of the ancestral This allows estimations Island, Bermuda, disruption range. -
AN ENUMERATION of the CRUSTACEA DECAPODA NATANTIA INHABITING SUBTERRANEAN WATERS L.-B Holthuis
AN ENUMERATION OF THE CRUSTACEA DECAPODA NATANTIA INHABITING SUBTERRANEAN WATERS L.-B Holthuis To cite this version: L.-B Holthuis. AN ENUMERATION OF THE CRUSTACEA DECAPODA NATANTIA INHABIT- ING SUBTERRANEAN WATERS. Vie et Milieu , Observatoire Océanologique - Laboratoire Arago, 1956, 7 (1), pp.43-76. hal-02748877 HAL Id: hal-02748877 https://hal.sorbonne-universite.fr/hal-02748877 Submitted on 3 Jun 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. AN ENUMERATION OF THE CRUSTACEA DECAPODA NATANTIA INHABITING SUBTERRANEAN WATERS par L.-B. HOLTHUIS Rijksmuseum van Natuurlijke Historié, Leiden, Holland The présent paper provides a list of the macrurous Decapod Crustacea, belonging to the supersection Natantia, that have been found in subterranean waters. The number of such species is quite small, being somewhat more than 40 in ail. Of thèse only part are actual troglobic forms, i.e. animais that are only known from caves and have not, or only incidentally, been found in waters that are exposed to daylight. A second group is formed by species that normally live in surface waters and only occasionally are met with in subterranean habitats. No sharp line can be drawn between thèse two catégories, the more so as at présent still extremely little is known of the biology and of the ecology of most of the species. -
How Might Sea Level Change Affect Arthropod Biodiversity in Anchialine Caves: a Comparison of Remipedia and Atyidae Taxa (Arthropoda: Altocrustacea)
Org Divers Evol (2014) 14:225–235 DOI 10.1007/s13127-014-0167-5 ORIGINAL ARTICLE How might sea level change affect arthropod biodiversity in anchialine caves: a comparison of Remipedia and Atyidae taxa (Arthropoda: Altocrustacea) Monica M. Moritsch & M. Joey Pakes & David R. Lindberg Received: 28 July 2013 /Accepted: 1 February 2014 /Published online: 28 February 2014 # Gesellschaft für Biologische Systematik 2014 Abstract Sea level change influences biodiversity of endem- shoreline, we evaluated how species richness and phylogenet- ic cave fauna to varying degrees. In anchialine systems, a ic diversity change with distance from the present and historic marine layer flows under less saline layers, each with differing ocean. Remipede species richness and phylogenetic diversity associated fauna. We assess the role of present and historic declined rapidly with distance from the ocean. Ninety-five (last glacial maximum – 18,000 years ago) distance from the percent of the remipedes surveyed were located within 7 km ocean in determining species richness and phylogenetic diver- of the present ocean and 18 km of the historic ocean. Atyid sity patterns for two groups of anchialine crustaceans: the species richness and phylogenetic diversity declined more marine-restricted Remipedia and a subset of groundwater- slowly with distance from the ocean than that of remipedes. inhabiting atyid shrimp with greater tolerance for salinity Atyid shrimp were also distributed over a broader range: 95 % variation. We calculated species richness and phylogenetic were located within 100 km of the present ocean and 240 km diversity per cave based on records of remipede and atyid of the historic ocean. -
View Preprint
A peer-reviewed version of this preprint was published in PeerJ on 23 July 2018. View the peer-reviewed version (peerj.com/articles/5268), which is the preferred citable publication unless you specifically need to cite this preprint. Guy-Haim T, Simon-Blecher N, Frumkin A, Naaman I, Achituv Y. 2018. Multiple transgressions and slow evolution shape the phylogeographic pattern of the blind cave-dwelling shrimp Typhlocaris. PeerJ 6:e5268 https://doi.org/10.7717/peerj.5268 Multiple transgressions and slow evolution shape the phylogeographic pattern of the blind cave-dwelling shrimp Typhlocaris Tamar Guy-Haim Corresp., 1, 2 , Noa Simon-Blecher 3 , Amos Frumkin 4 , Israel Naaman 4 , Yair Achituv 3 1 Marine Ecology, GEOMAR, Helmholtz Centre for Ocean Research, Kiel, Germany 2 Marine Biology, Israel Oceanographic and Limnological Research, Haifa, Israel 3 The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat Gan, Israel 4 Institute of Earth Science, Hebrew University of Jerusalem, Jerusalem, Israel Corresponding Author: Tamar Guy-Haim Email address: [email protected] Background. Aquatic subterranean species often exhibit disjunct distributions, with high level of endemism and small range, shaped by vicariance, limited dispersal, and evolutionary rates. We studied the disjunct biogeographic patterns of an endangered blind cave shrimp, Typhlocaris, and identified the geological and evolutionary processes that have shaped its divergence pattern. Methods. We collected Typlocaris specimens of three species (T. galilea, T. ayyaloni, and T. salentina), originating from subterranean groundwater caves by the Mediterranean Sea, and used three mitochondrial genes (12S, 16S, COI) and four nuclear genes (18S, 28S, ITS, H3) to infer their phylogenetic relationships. -
Estimating Population Size of the Cave Shrimp Troglocaris Anophthalmus (Crustacea, Decapoda, Caridea) Using Mark–Release–Recapture Data
Animal Biodiversity and Conservation 38.1 (2015) 77 Estimating population size of the cave shrimp Troglocaris anophthalmus (Crustacea, Decapoda, Caridea) using mark–release–recapture data J. Jugovic, E. Praprotnik, E. V. Buzan & M. Lužnik Jugovic, J., Praprotnik, E., Buzan, E. V. & Lužnik, M., 2015. Estimating population size of the cave shrimp Troglocaris anophthalmus (Crustacea, Decapoda, Caridea) using mark–release–recapture data. Animal Biodiversity and Conservation, 38.1: 77–86, Doi: https://doi.org/10.32800/abc.2015.38.0077 Abstract Estimating population size of the cave shrimp Troglocaris anophthalmus (Crustacea, Decapoda, Caridea) using mark–release–recapture data.— Population size estimates are lacking for many small cave–dwelling aquatic in- vertebrates that are vulnerable to groundwater contamination from anthropogenic activities. Here we estimated the population size of freshwater shrimp Troglocaris anophthalmus sontica (Crustacea, Decapoda, Caridea) based on mark–release–recapture techniques. The subspecies was investigated in Vipavska jama (Vipava cave), Slovenia, with estimates of sex ratio and age distribution. A high abundance of shrimps was found even after considering the lower limit of the confidence intervals. However, we found no evidence of differences in shrimp abundances between summer and winter. The population was dominated by females. Ease of capture and abundant popula- tion numbers indicate that these cave shrimps may be useful as a bioindicator in cave ecosystems. Key words: Mark–release–recapture, Population size, Dinarides, Vipavska jama, Sex ratio Resumen Estimación del tamaño de la población del camarón cavernícola Troglocaris anophthalmus (Crustacea, Decapoda, Caridea) mediante la utilización de datos de marcaje, liberación y recaptura.— Se desconoce el tamaño de la población de numerosos invertebrados acuáticos cavernícolas que son vulnerables a la contaminación de las aguas subterráneas provocada por las actividades antropogénicas. -
An Unusual New Record of Typhlocaris Salentina (Caroli, 1923) (Decapoda: Typhlocarididae) from Subterranean Water of Apulia (Southern Italy)
Atti Soc. it. Sci. nat. Museo civ. Stor. nat. Milano, 142/2001 (I): 103-108, Novembre 2001 Carlo Froglia* & Nicola Ungaro An unusual new record of Typhlocaris salentina (Caroli, 1923) (Decapoda: Typhlocarididae) from subterranean water of Apulia (Southern Italy) Abstract - In December 1995, three large females of Typhlocaris salentina were collected in an artificial well located in the basement of a building in downtown Bari, when the well was dried out for maintenance works. The present finding extends the known range of T. salentina northwards and definitively proves the prawn is not restricted to the Salento subterranean water system, but is also present in the lower Murge karst system. Key words: Typhlocaris salentina, Decapoda, Typhlocarididae, troglobious fauna, Italy. Riassunto. - Nuova ed insolita segnalazione di Typhlocaris salentina (Caroli, 1923) (Decapoda: Typhlocarididae) nelle acque sotterranee della Puglia (Italia meridionale). Si segnala la cattura di tre esemplari adulti di Typhlocaris salentina in un pozzo ubicato nello scantinato di un edificio nella citta di Bari. Si conferma quindi la presenza di questa specie troglobia, endemica della Puglia, anche nel sistema carsico delle Murgie, oltre che nel sistema carsico del Salento. Sulla superficie della cuticola di tutti e tre gli esemplari sono state osservate loriche di Foliculinidi, una famiglia di Ciliati mai segnalata in precedenza in Decapodi troglobi. Parole chiave: Typhlocaris salentina, Decapoda, Typhlocarididae, fauna troglobia, Italia. Introduction The palaemonoid genus Typhlocaris Caiman, 1909 includes 3 troglobitic ' freshwater species restricted to the Mediterranean area (Holthuis, 1986). Two species are known from their type localities only: T. galilea Caiman, 1909 from a pool fed by a mineral spring at Tabgha, Northern shore of the Lake i Tiberias (Israel) and T. -
V. on a Blind Prawn from the Sea of Galilee (Typhlocaris Galilea, G.Et Sp
[ 93 1 V. On a Blind Prawn from the Sea of Galilee (Typhlocaris galilea, g. et sp. n.). By W. T. CALMAN,DSc., F.Z.S. (Communicated by permission of the Trustees of the Bs-itish Museum.) (Plate 19.) Read 1st April, 1909. THEBritish Museum has recently received from Mr. R. Grossmann, of Tiberias, two specimens of a blind Crustacean, which differs in some remarkable characters from any species at present known. The specimens, I understand, were not actually taken in the Sea of Galilee itself, but from a small pond near the town of Tiberias communicating with the lake and fed by st mineral spring. .From the fact that the animal is without any organs of sight (so far as can be ascertained by external examination), it seems most probable that it is a species of subterranean habitat, brought to the surface by the waters of the spring. It is much less probable that the specimens entered the pond from the lake, although this is no doubt the origin of some small fish, taken along with the prawns, which have been identified by my colleague Mr. C. Tate Regan as ~iscoglzathueEamta, a common Syrian species. Among the numerous species of subterranean Crustacea which have been described, only a small number belong to Decapoda. The following list includes all the truly subterranean species of which I can find record :- A BTAC I DE . I PALEMONIDB. Cambarus pellucidus (Tellkampf) *. Pahonetes antrorum, Benedict 4. ,, hamulatus, Cope & Packard *. ,, eigenmanni, Hay 11. ,, setosus, Faxon t. ATYIDE. acherontis, Lonnberg ,, 3. Troglocaris schmidtii, Dormitzer 7. Palcemonias ganteri, Hay **. -
Evolutionary History of Relict Congeria (Bivalvia: Dreissenidae): Unearthing the Subterranean Biodiversity of the Dinaric Karst Bilandžija Et Al
Evolutionary history of relict Congeria (Bivalvia: Dreissenidae): unearthing the subterranean biodiversity of the Dinaric Karst Bilandžija et al. Bilandžija et al. Frontiers in Zoology 2013, 10:5 http://www.frontiersinzoology.com/content/10/1/5 Bilandžija et al. Frontiers in Zoology 2013, 10:5 http://www.frontiersinzoology.com/content/10/1/5 RESEARCH Open Access Evolutionary history of relict Congeria (Bivalvia: Dreissenidae): unearthing the subterranean biodiversity of the Dinaric Karst Helena Bilandžija1,2, Brian Morton3, Martina Podnar4 and Helena Ćetković1* Abstract Background: Patterns of biodiversity in the subterranean realm are typically different from those encountered on the Earth’s surface. The Dinaric karst of Croatia, Slovenia and Bosnia and Herzegovina is a global hotspot of subterranean biodiversity. How this was achieved and why this is so remain largely unresolved despite a long tradition of research. To obtain insights into the colonisation of the Dinaric Karst and the effects of the subterranean realm on its inhabitants, we studied the tertiary relict Congeria, a unique cave-dwelling bivalve (Dreissenidae), using a combination of biogeographical, molecular, morphological, and paleontological information. Results: Phylogenetic and molecular clock analyses using both nuclear and mitochondrial markers have shown that the surviving Congeria lineage has actually split into three distinct species, i.e., C. kusceri, C. jalzici sp. nov. and C. mulaomerovici sp. nov., by vicariant processes in the late Miocene and Pliocene. Despite millions of years of independent evolution, analyses have demonstrated a great deal of shell similarity between modern Congeria species, although slight differences in hinge plate structure have enabled the description of the two new species. -
Structure, Function and Development of the Digestive System in Malacostracan Crustaceans and Adaptation to Different Lifestyles
Cell and Tissue Research (2019) 377:415–443 https://doi.org/10.1007/s00441-019-03056-0 REVIEW Structure, function and development of the digestive system in malacostracan crustaceans and adaptation to different lifestyles Jasna Štrus1 & Nada Žnidaršič1 & Polona Mrak1 & Urban Bogataj1 & Günter Vogt2 Received: 15 January 2019 /Accepted: 9 June 2019 /Published online: 4 July 2019 # Springer-Verlag GmbH Germany, part of Springer Nature 2019 Abstract The digestive system of the malacostracan crustaceans, namely the decapods, isopods, amphipods and mysids, is among the most complex organ systems of the animal kingdom serving multiple functions such as food processing, absorption and storage of nutrients, synthesis of digestive enzymes and blood proteins, detoxification of xenobiotics and osmoregulation. It is rather well investigated compared to other invertebrates because the Malacostraca include many ecological keystone species and food items for humans. The Decapoda and Peracarida share food processing with chewing and filtering structures of the stomach but differ with respect to morphology and ultrastructure of the digestive glands. In the Peracarida, the digestive glands are composed of few, relatively large lateral caeca, whereas in the Decapoda, hundreds to thousands of blindly ending tubules form a voluminous hepatopancreas. Morphogenesis and onset of functionality of the digestive system strongly depend on the mode of development. The digestive system is early developed in species with feeding planktonic larvae and appears late in species with direct lecithotrophic development. Some structures of the digestive system like the stomach ossicles are rather constant in higher taxa and are of taxonomic value, whereas others like the chewing structures are to some degree adapted to the feeding strategy.