The Clinical Investigator: Bewitched, Bothered, and Bewildered-- but Still Beloved
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Biochemistrystanford00kornrich.Pdf
University of California Berkeley Regional Oral History Office University of California The Bancroft Library Berkeley, California Program in the History of the Biosciences and Biotechnology Arthur Kornberg, M.D. BIOCHEMISTRY AT STANFORD, BIOTECHNOLOGY AT DNAX With an Introduction by Joshua Lederberg Interviews Conducted by Sally Smith Hughes, Ph.D. in 1997 Copyright 1998 by The Regents of the University of California Since 1954 the Regional Oral History Office has been interviewing leading participants in or well-placed witnesses to major events in the development of Northern California, the West, and the Nation. Oral history is a method of collecting historical information through tape-recorded interviews between a narrator with firsthand knowledge of historically significant events and a well- informed interviewer, with the goal of preserving substantive additions to the historical record. The tape recording is transcribed, lightly edited for continuity and clarity, and reviewed by the interviewee. The corrected manuscript is indexed, bound with photographs and illustrative materials, and placed in The Bancroft Library at the University of California, Berkeley, and in other research collections for scholarly use. Because it is primary material, oral history is not intended to present the final, verified, or complete narrative of events. It is a spoken account, offered by the interviewee in response to questioning, and as such it is reflective, partisan, deeply involved, and irreplaceable. ************************************ All uses of this manuscript are covered by a legal agreement between The Regents of the University of California and Arthur Kornberg, M.D., dated June 18, 1997. The manuscript is thereby made available for research purposes. All literary rights in the manuscript, including the right to publish, are reserved to The Bancroft Library of the University of California, Berkeley. -
Lecture Program
EARL W. SUTHERLAND LECTURE EARL W. SUTHERLAND LECTURE The Earl W. Sutherland Lecture Series was established by the SPONSORED BY: Department of Molecular Physiology and Biophysics in 1997 DEPARTMENT OF MOLECULAR PHYSIOLOGY AND BIOPHYSICS to honor Dr. Sutherland, a former member of this department and winner of the 1971 Nobel Prize in Physiology or Medicine. This series highlights important advances in cell signaling. ROBERT J. LEFKOWITZ, MD NOBEL PRIZE IN CHEMISTRY, 2012 SPEAKERS IN THIS SERIES HAVE INCLUDED: SEVEN TRANSMEMBRANE RECEPTORS Edmond H. Fischer (1997) Alfred G. Gilman (1999) Ferid Murad (2001) Louis J. Ignarro (2003) MARCH 31, 2016 Paul Greengard (2007) 4:00 P.M. 208 LIGHT HALL Eric Kandel (2009) Roger Tsien (2011) Michael S. Brown (2013) 867-2923-Institution-Discovery Lecture Series-Lefkowitz-BK-CH.indd 1 3/11/16 9:39 AM EARL W. SUTHERLAND, 1915-1974 ROBERT J. LEFKOWITZ, MD JAMES B. DUKE PROFESSOR, Earl W. Sutherland grew up in Burlingame, Kansas, a small farming community DUKE UNIVERSITY MEDICAL CENTER that nourished his love for the outdoors and fishing, which he retained throughout INVESTIGATOR, HOWARD HUGHES MEDICAL INSTITUTE his life. He graduated from Washburn College in 1937 and then received his MEMBER, NATIONAL ACADEMY OF SCIENCES M.D. from Washington University School of Medicine in 1942. After serving as a MEMBER, INSTITUTE OF MEDICINE medical officer during World War II, he returned to Washington University to train NOBEL PRIZE IN CHEMISTRY, 2012 with Carl and Gerty Cori. During those years he was influenced by his interactions with such eminent scientists as Louis Leloir, Herman Kalckar, Severo Ochoa, Arthur Kornberg, Christian deDuve, Sidney Colowick, Edwin Krebs, Theodore Robert J. -
Moore Noller
2002 Ada Doisy Lectures Ada Doisy Lecturers 2003 in BIOCHEMISTRY Sponsored by the Department of Biochemistry • University of Illinois at Urbana-Champaign Dr. Peter B. 1970-71 Charles Huggins* and Elwood V. Jensen A76 1972-73 Paul Berg* and Walter Gilbert* Moore 1973-74 Saul Roseman and Bruce Ames Department of Molecular carbonyl Biophysics & Biochemistry Phe 1974-75 Arthur Kornberg* and Osamu Hayaishi Yale University C75 1976-77 Luis F. Leloir* New Haven, Connecticutt 1977-78 Albert L. Lehninger and Efraim Racker 2' OH attacking 1978-79 Donald D. Brown and Herbert Boyer amino N3 Tyr 1979-80 Charles Yanofsky A76 4:00 p.m. A2486 1980-81 Leroy E. Hood Thursday, May 1, 2003 (2491) 1983-84 Joseph L. Goldstein* and Michael S. Brown* Medical Sciences Auditorium 1984-85 Joan Steitz and Phillip Sharp* Structure and Function in 1985-86 Stephen J. Benkovic and Jeremy R. Knowles the Large Ribosomal Subunit 1986-87 Tom Maniatis and Mark Ptashne 1988-89 J. Michael Bishop* and Harold E. Varmus* 1989-90 Kurt Wüthrich Dr. Harry F. 1990-91 Edmond H. Fischer* and Edwin G. Krebs* 1993-94 Bert W. O’Malley Noller 1994-95 Earl W. Davie and John W. Suttie Director, Center for Molecular Biology of RNA 1995-96 Richard J. Roberts* University of California, Santa Cruz 1996-97 Ronald M. Evans Santa Cruz, California 1998-99 Elizabeth H. Blackburn 1999-2000 Carl R. Woese and Norman R. Pace 2000-01 Willem P. C. Stemmer and Ronald W. Davis 2001-02 Janos K. Lanyi and Sir John E. Walker* 12:00 noon 2002-03 Peter B. -
Arthur Kornberg Discovered (The First) DNA Polymerase Four
Arthur Kornberg discovered (the first) DNA polymerase Using an “in vitro” system for DNA polymerase activity: 1. Grow E. coli 2. Break open cells 3. Prepare soluble extract 4. Fractionate extract to resolve different proteins from each other; repeat; repeat 5. Search for DNA polymerase activity using an biochemical assay: incorporate radioactive building blocks into DNA chains Four requirements of DNA-templated (DNA-dependent) DNA polymerases • single-stranded template • deoxyribonucleotides with 5’ triphosphate (dNTPs) • magnesium ions • annealed primer with 3’ OH Synthesis ONLY occurs in the 5’-3’ direction Fig 4-1 E. coli DNA polymerase I 5’-3’ polymerase activity Primer has a 3’-OH Incoming dNTP has a 5’ triphosphate Pyrophosphate (PP) is lost when dNMP adds to the chain E. coli DNA polymerase I: 3 separable enzyme activities in 3 protein domains 5’-3’ polymerase + 3’-5’ exonuclease = Klenow fragment N C 5’-3’ exonuclease Fig 4-3 E. coli DNA polymerase I 3’-5’ exonuclease Opposite polarity compared to polymerase: polymerase activity must stop to allow 3’-5’ exonuclease activity No dNTP can be re-made in reversed 3’-5’ direction: dNMP released by hydrolysis of phosphodiester backboneFig 4-4 Proof-reading (editing) of misincorporated 3’ dNMP by the 3’-5’ exonuclease Fidelity is accuracy of template-cognate dNTP selection. It depends on the polymerase active site structure and the balance of competing polymerase and exonuclease activities. A mismatch disfavors extension and favors the exonuclease.Fig 4-5 Superimposed structure of the Klenow fragment of DNA pol I with two different DNAs “Fingers” “Thumb” “Palm” red/orange helix: 3’ in red is elongating blue/cyan helix: 3’ in blue is getting edited Fig 4-6 E. -
Download Ps Nobel Prizes for Site BEE 11.18.16 Revised 11.30.17.Pdf
Nobel Laureates at the College of Physicians and Surgeons For years, College of Physicians and Surgeons alumni, faculty, and researchers have led groundbreaking clinical and basic scientific studies that have transformed our understanding of human biology and advanced the practice of medicine. On many occasions, this work has been honored with the Nobel Prize. The scope of research led by P&S Nobel laureates is tremendous. Although most of our prizewinners were honored for work in physiology or medicine, a few also received the prize for chemistry. Their research has fundamentally shaped the course of numerous fields, including cardiology, neuroscience, genetics, pharmaceutical development, and more. Our Nobel laureates include: André Cournand and Dickinson Richards (P&S’23), whose work at P&S on cardiac catheterization—a method of inserting a tiny tube into the heart—provided the basis for open-heart surgery and interventional cardiology Baruch Blumberg (P&S’51), who discovered the hepatitis B virus and helped develop a test and a vaccine for the virus Joshua Lederberg, a Columbia College and P&S graduate student who showed that bacteria can exchange genes when they reproduce, creating a way to model and study genetics in higher organisms Harold Varmus (P&S’66), who demonstrated how genes in normal human and animal cells can mutate to cause cancer, leading to a new generation of research on the genetic origins of cancer Eric Kandel, current University Professor, who showed how memories are stored in nerve cells, greatly enhancing -
February 5, 2010, NIH Record, Vol. LXII, No. 3
FEBRUARY 5, 2010 The Second Best Thing About Payday VOL. LXII, NO. 3 The Revolution Continues Green Offers Tour of Genomic Landscape, Circa 2010 By Rich McManus ABOVE · NIAID’s Alonda LeCounte sacrificed a kidney to benefit her stepfather. See story here is a good reason that Lipsett on p. 7. TAmphitheater was jammed with at- features tendees as NHGRI began its modestly titled Current Topics in Genome Analysis 1 course—an institute staple since 1995— Green Presents Challenges of Genomic Medicine on Jan. 12. The 11-lecture series that ends Mar. 23 was launched by NHGRI di- 3 rector Dr. Eric Green, who in 90 minutes Greider Explains Science Behind Her Nobel Prize surveyed highlights of what mankind has learned of its genetic heritage start- 5 ing before Mendel (1865) to the present. Harvard’s Frenk Lectures on Global Health A postdoctoral fellow at the outset of the Human Genome Project in 1990, NHGRI director Dr. Eric Green 7 Green offered a robust primer of a field NIAID Employee’s Generosity Offers that literally exploded during the “genomic revolution” of the 1990s. Having a front- Stepfather New Life row seat at what is arguably the most significant scientific endeavor of the past century 12 gives Green both authority and a rich fund of metaphor: the 3 billion base pairs NHGRI Fellow Plays with ‘Rock Stars see genome, page 6 Of Science’ Anything Is Possible Nobelist Nirenberg, MIT’s Herr Works to Discoverer of the Make Physical Genetic Code, departments Disabilities a Thing Mourned Of the Past By Alan Schechter Briefs 2 By Valerie Lambros Milestones 9 Dr. -
Obituary: Professor Arturo Falaschi the Human Frontier Science
Obituary: Professor Arturo Falaschi The Human Frontier Science Program Organization is greatly saddened by the sudden death of Prof. Arturo Falaschi on June 1st 2010. Arturo was a member of the HFSP Council of Scientists from 1996-2001, serving as Chair of the Council for two years from 2000-2001. This was a time of great change for HFSP following the appointment of Torsten Wiesel as Secretary General and the introduction of many program initiatives. Arturo led the discussions at the Council of Scientists with great energy and imagination. He contributed substantially to the transformation of HFSP that occurred during this period, being instrumental in the reorganization of the scientific programs by championing the merging of the traditional neuroscience and molecular biology committees. Arturo Falaschi had a distinguished scientific career in the field of DNA replication. After postdoctoral training with Nobel Laureates Har Gobind Khorana in Wisconsin and Arthur Kornberg at Stanford, he returned to Italy to the Institute of Genetics of the CNR (the Italian National Research Council) at the University of Pavia, where he was later appointed as Director of the CNR Institute for Biochemical and Evolutionary Genetics and then Director of the CNR National Project for Genetic Engineering. In 1987 he became Head of the Trieste component of the International Centre for Genetic Engineering and Biotechnology (ICGEB). From 1989-2004 he was Director-General of the ICGEB and remained associated with the Centre as Head of the ICGEB Molecular Biology Laboratory in Pisa. He also served as a member of the Executive Committee of the CNR. Arturo had a strong commitment to the global scientific endeavour. -
Cover June 2011
z NOBEL LAUREATES IN Qui DNA RESEARCH n u SANGRAM KESHARI LENKA & CHINMOYEE MAHARANA F 1. Who got the Nobel Prize in Physiology or Medicine 1933) for discovering the famous concept that says chromosomes carry genes? a. Gregor Johann Mendel b. Thomas Hunt Morgan c. Aristotle d. Charles Darwin 5. Name the Nobel laureate (1959) for his discovery of the mechanisms in the biological 2. The concept of Mutations synthesis of ribonucleic acid and are changes in genetic deoxyribonucleic acid? information” awarded him a. Arthur Kornberg b. Har Gobind Khorana the Nobel Prize in 1946: c. Roger D. Kornberg d. James D. Watson a. Hermann Muller b. M.F. Perutz c. James D. Watson 6. Discovery of the DNA double helix fetched them d. Har Gobind Khorana the Nobel Prize in Physiology or Medicine (1962). a. Francis Crick, James Watson, Rosalind Elsie Franklin b. Francis Crick, James Watson and Maurice Willkins c. James Watson, Maurice Willkins, Rosalind Elsie Franklin 3. Identify the discoverer and d. Maurice Willkins, Rosalind Elsie Franklin and Francis Crick Nobel laureate of 1958 who found DNA in bacteria and viruses. a. Louis Pasteur b. Alexander Fleming c. Joshua Lederberg d. Roger D. Kornberg 4. A direct link between genes and enzymatic reactions, known as the famous “one gene, one enzyme” hypothesis, was put forth by these 7. They developed the theory of genetic regulatory scientists who shared the Nobel Prize in mechanisms, showing how, on a molecular level, Physiology or Medicine, 1958. certain genes are activated and suppressed. Name a. George Wells Beadle and Edward Lawrie Tatum these famous Nobel laureates of 1965. -
Biographical Notes on Scientists Involved in the Asilomar Process M.J
International Dimensions of Ethics Education in Science and Engineering Case Study Series: Asilomar Conference on Laboratory Precautions Appendix D: Biographical Notes on Scientists involved in the Asilomar Process M.J. Peterson Version 1, June 2010 Edward A. Adelberg (1920-2009). PhD Yale 1949. Chair of Yale Department of Microbiology 1961-64 and 1970-72; a founding member of Yale Department of Genetics. Deputy Provost for the Biomedical Sciences, 1983-91. Specialist in plasmid biochemistry of E. coli. Ephraim Anderson (1911-2006). M.D., Durham University. Served in the Royal Army Medical Corps during World War II where he developed interests in Epidemiology. Researcher in Enteric Laboratory of the British Public Health Laboratory Service 1947, Deputy Director 1952, Director 1954-1978. Came to public notice for tracing sources of typhoid outbreaks in Zermatt (1963) and Aberdeen (1964). Built on earlier work by Japanese researchers to demonstrate the plasmid-based pathways by which bacteria could spread antibiotic resistance to others and became the world’s leading expert on antibiotic resistance. Also prominent in efforts to limit use of antibiotics in raising animals. Fellow of the Royal Society 1968; Companion of the Order of the British Empire 1976. Eric Ashby, Baron Ashby (1904-1992). Lecturer in Botany, Imperial College London 1931-35; Reader in Botany Bristol University 1935-37; Professor of Botany University of Sydney 1938-1946; Chair of Botany, University of Manchester 1947-50. Turned to administration as President and Vice-Chancellor of Queen's University, Belfast 1950-59; Master of Clare College in Cambridge University 1959-67 and Vice-Chancellor of Cambridge University 1967-1969. -
Balcomk41251.Pdf (558.9Kb)
Copyright by Karen Suzanne Balcom 2005 The Dissertation Committee for Karen Suzanne Balcom Certifies that this is the approved version of the following dissertation: Discovery and Information Use Patterns of Nobel Laureates in Physiology or Medicine Committee: E. Glynn Harmon, Supervisor Julie Hallmark Billie Grace Herring James D. Legler Brooke E. Sheldon Discovery and Information Use Patterns of Nobel Laureates in Physiology or Medicine by Karen Suzanne Balcom, B.A., M.L.S. Dissertation Presented to the Faculty of the Graduate School of The University of Texas at Austin in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy The University of Texas at Austin August, 2005 Dedication I dedicate this dissertation to my first teachers: my father, George Sheldon Balcom, who passed away before this task was begun, and to my mother, Marian Dyer Balcom, who passed away before it was completed. I also dedicate it to my dissertation committee members: Drs. Billie Grace Herring, Brooke Sheldon, Julie Hallmark and to my supervisor, Dr. Glynn Harmon. They were all teachers, mentors, and friends who lifted me up when I was down. Acknowledgements I would first like to thank my committee: Julie Hallmark, Billie Grace Herring, Jim Legler, M.D., Brooke E. Sheldon, and Glynn Harmon for their encouragement, patience and support during the nine years that this investigation was a work in progress. I could not have had a better committee. They are my enduring friends and I hope I prove worthy of the faith they have always showed in me. I am grateful to Dr. -
Telomere Biology: a Short History
Telomere Biology: A Short History Chromosomes are the thread-like structures containing the twisted helix of DNA that carries genetic information in the form of genes located inside the nucleus of every plant, animal and fungus cell. Each time a cell reproduces, the chromosomes replicate, pro- ducing two daughter cells with the same genetic coding. The natural ends of each chro- mosome are protected from damage by repetitive sequences of non-coding DNA, called telomeres. Telomeres were first identified in 1938 by Hermann Muller (Nobel Prize in Physiology or Medicine 1933), working with fruit fly (Drosophila) cells, and then, in 1940, in corn (Zea mays) cells, by Barbara McClintock (Nobel Prize in Physiology or Medicine 1983). Both geneticists found that the ends of natural chromosomes were different from those of broken chromosomes and therefore must be unique structures. They called these struc- tures telomeres. Muller found that telomeres were integral to chromosomal stability, and McClintock further surmised that these caps prevented the ends of chromosomes from fusing together. Thus, telomeres were discovered and their function hypothesized before the double helix structure of DNA was established! The famous work of James Watson and Francis Crick in 1953 (Nobel Prize in Physiology or Medicine 1962, along with Maurice Wilkins), revealed the double helix structure of DNA, which offered a mechanism for DNA replication that could result in two identical daughter chromosomes. The genetic base-pair alphabet (ACGT) spells out the repeti- tive sequences of telomeres as well as codons (genes). In 1959, Arthur Kornberg won the Nobel Prize in Physiology or Medicine for his work on DNA polymerases, enzymes crucial to chromosomal replication. -
Members of Groups Central to the Scientists' Debates About Rdna
International Dimensions of Ethics Education in Science and Engineering Case Study Series: Asilomar Conference on Laboratory Precautions Appendix C: Members of Groups Central to the Scientists’ Debates about rDNA Research 1973-76 M.J. Peterson Version 1, June 2010 Signers of Singer-Söll Letter 1973 Maxine Singer Dieter Söll Signers of Berg Letter 1974 Paul Berg David Baltimore Herbert Boyer Stanley Cohen Ronald Davis David S. Hogness Daniel Nathans Richard O. Roblin III James Watson Sherman Weissman Norton D. Zinder Organizing Committee for the Asilomar Conference David Baltimore Paul Berg Sydney Brenner Richard O. Roblin III Maxine Singer This case was created by the International Dimensions of Ethics Education in Science and Engineering (IDEESE) Project at the University of Massachusetts Amherst with support from the National Science Foundation under grant number 0734887. Any opinions, findings, conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. More information about the IDEESE and copies of its modules can be found at http://www.umass.edu/sts/ethics. This case should be cited as: M.J. Peterson. 2010. “Asilomar Conference on Laboratory Precautions When Conducting Recombinant DNA Research.” International Dimensions of Ethics Education in Science and Engineering. Available www.umass.edu/sts/ethics. © 2010 IDEESE Project Appendix C Working Groups for the Asilomar Conference Plasmids Richard Novick (Chair) Royston C. Clowes (Institute for Molecular Biology, University of Texas at Dallas) Stanley N. Cohen Roy Curtiss III Stanley Falkow Eukaryotes Donald Brown (Chair) Sydney Brenner Robert H. Burris (Department of Biochemistry, University of Wisconsin) Dana Carroll (Department of Embryology, Carnegie Institution, Baltimore) Ronald W.